F415904

General Info

Members Datasets Scaffolds Average Seq Length
344 232 250 643

Family's Representative Sequence

Representative Sequence 3300006038|Ga0075365_10004065|Ga0075365_100040653
Length 665
Sequence MSLLTSLAGPRDLDALSVEQLEQLAAETRAFLIENVARTGGHLGPNLGVVELTIAIHRVFDSPRDPIVFDTGHQSYVHKLLTGRRDFSALRSRGGLAGYPQRSESEHDIVESSHASSSLSWADGISRAFARTGRRDRHVVAIVGDGALTGGMTWEALNNISDDNGRNLVIVVNXXXRSYAPTIGGMARYLNRVRTADAYQSLHRGSRNLFGKLGPAARAVYRGVRGGTHGFLSRFVNNEALYSNLDIKYLGPVDGHDLPMLIETLEQAKRYGAPVIVHAITEKGRGYQPAMDDEADQFHAVGRIDPVTGETLGAAAGLAWTDVFAQELVRIGDARADVVAITAAMLRPTGLLPFAERHPDRVLDVGIAEQHAAASAAGLAYGGLHPVVALYATFVNRAFDQVLMDVALHRAGVTFVLDRAGVTGPDGPSHHGIWDLALLQLVPRIRIAAPRDAARLREELTEAVAIDDAPTVLRYPKGAVSPDLPALERLPDGVDVLARSTAADVLLVGIGPMAHVAMDVASRLGAQGIGATVVDPRWVVPVAASLTELAAAHRLVITIEDGIRVGGIGTRIRQVLREAGVDTAVDELGLPDEFIDHASRDQILADAGLTAAKIAQDVVAQVLGTRIPVARPTADADGPDAEDWDQNGGEPVSGTNTTLGGGSSR

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
3 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
4 2643221546 Microbacterium sp. Root53 Isolate Unclassified
5 2643221549 Agromyces sp. Root1464 Isolate Unclassified
6 2643221553 Microbacterium sp. Root553 Isolate Unclassified
7 2643221566 Microbacterium sp. Root166 Isolate Unclassified
8 2643221572 Leifsonia sp. Root60 Isolate Unclassified
9 2643221575 Microbacterium sp. Root61 Isolate Unclassified
10 2643221597 Microbacterium sp. Root180 Isolate Unclassified
11 2643221616 Leifsonia sp. Root227 Isolate Unclassified
12 2643221619 Agromyces sp. Root81 Isolate Unclassified
13 2643221630 Microbacterium sp. Root322 Isolate Unclassified
14 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
15 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
16 2643221649 Leifsonia sp. Root4 Isolate Unclassified
17 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
18 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
19 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
20 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
21 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
22 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
23 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
24 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
25 2773857759 Microbacterium sp. 1294 Isolate Unclassified
26 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
27 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
28 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
29 2808606372 Agromyces sp. 23-23 Isolate Unclassified
30 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
31 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
32 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
33 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
34 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
35 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
36 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
37 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
38 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
39 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
40 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
41 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
42 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
43 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
44 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
45 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
46 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
47 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
48 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
49 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
50 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
51 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
52 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
53 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
54 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
55 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
56 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
57 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
58 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
59 2919069694 Microbacterium sp. 1154 Isolate Unclassified
60 2919395869 Microbacterium resistens 2980 Isolate Unclassified
61 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
62 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
63 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
64 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
65 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
66 2928153084 Leifsonia sp. 563 Isolate Unclassified
67 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
68 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
69 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
70 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
71 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
72 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
73 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
74 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
75 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
76 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
77 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
78 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
79 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
80 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
81 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
82 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
83 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
84 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
85 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
86 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
87 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
88 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
89 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
90 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
91 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
92 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
93 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
94 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
95 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
96 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
97 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
98 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
99 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
100 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
101 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
102 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
103 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
104 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
105 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
106 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
107 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
108 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
109 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
110 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
111 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
112 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
113 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
114 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
115 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
116 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
117 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
118 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
119 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
120 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
121 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
122 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
123 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
124 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
125 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
126 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
127 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
128 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
129 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
134 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
135 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
136 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
137 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
139 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
140 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
141 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
159 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
160 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
165 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
166 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
167 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
168 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
169 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
170 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
171 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
172 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
173 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
174 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
175 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
176 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
177 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
178 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
179 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
180 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
181 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
182 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
183 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
184 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
185 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
186 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
187 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
188 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
189 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
190 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
191 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
192 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
197 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
200 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
201 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
205 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
206 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
207 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
208 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
209 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
210 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
212 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
213 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
214 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
215 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
216 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
217 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
218 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
219 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
220 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
221 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
222 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
223 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
224 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
225 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
226 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
227 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
228 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
229 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
230 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
231 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
232 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.64
Metatranscriptomes 2.03
Isolates 27.33

Biome Distribution

Category Percentage (%)
Aerial Root 0.87
Bulb 0
Endosphere 12.21
Nodule 0
Rhizoplane 3.78
Rhizosphere 54.94
Stem 0
Stem Tuber 0.29
Unclassified 27.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1001406 3300002738 Bacteria 8652
2 JGI25164J39214_1000358 3300002772 Bacteria 28120
3 JGI25165J46597_1000004 3300003214 Bacteria 667510
4 Ga0006562J51391_1082870 3300003578 Bacteria 3920
5 Ga0006562J51391_1082871 3300003578 Bacteria 3730
6 Ga0006562J51391_1129022 3300003578 Bacteria 2840
7 Ga0055539_1000008 3300003752 Bacteria 537665
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1000555 3300003759 Bacteria 17152
10 Ga0055527_1000001 3300003760 Bacteria 850044
11 Ga0055529_1000018 3300003763 Bacteria 344344
12 Ga0070658_10000211 3300005327 Bacteria 51730
13 Ga0070658_10001109 3300005327 Bacteria 22993
14 Ga0070658_10006280 3300005327 Bacteria 9625
15 Ga0070683_100105407 3300005329 Bacteria 2658
16 Ga0070680_100000583 3300005336 Bacteria 25199
17 Ga0068868_100065683 3300005338 Bacteria 2883
18 Ga0070668_100103121 3300005347 Bacteria 2263
19 Ga0070659_100000460 3300005366 Bacteria 30067
20 Ga0070659_100001103 3300005366 Bacteria 19717
21 Ga0070667_100036843 3300005367 Bacteria 4100
22 Ga0070679_100000620 3300005530 Bacteria 30190
23 Ga0068853_100073188 3300005539 Bacteria 2987
24 Ga0070672_100012953 3300005543 Bacteria 5877
25 Ga0068857_100000938 3300005577 Bacteria 22167
26 Ga0068854_100097719 3300005578 Bacteria 2196
27 Ga0068852_100007288 3300005616 Bacteria 8064
28 Ga0068864_100039326 3300005618 Bacteria 4043
29 Ga0068851_10000003 3300005834 Bacteria 293018
30 Ga0068858_100000114 3300005842 Bacteria 84795
31 Ga0075365_10004065 3300006038 Bacteria 7679
32 Ga0075365_10012355 3300006038 Bacteria 5068
33 Ga0075367_10007877 3300006178 Bacteria 5484
34 Ga0105244_10016949 3300009036 Bacteria 4133
35 Ga0105240_10002075 3300009093 Bacteria 32842
36 Ga0105248_10000876 3300009177 Bacteria 33746
37 Ga0105237_10001056 3300009545 Bacteria 36997
38 Ga0105238_10002459 3300009551 Bacteria 18564
39 Ga0105239_10129106 3300010375 Bacteria 2810
40 Ga0157370_10001218 3300013104 Bacteria 32238
41 Ga0157369_10000757 3300013105 Bacteria 41659
42 Ga0157369_10009087 3300013105 Bacteria 11375
43 Ga0157369_10047274 3300013105 Bacteria 4674
44 Ga0157369_10052979 3300013105 Bacteria 4387
45 Ga0157369_10167132 3300013105 Bacteria 2319
46 Ga0171462_1003 3300013250 Bacteria 853796
47 Ga0163162_10038382 3300013306 Bacteria 4779
48 Ga0157372_10122586 3300013307 Bacteria 2987
49 Ga0163163_10003936 3300014325 Bacteria 12671
50 Ga0197907_10660401 3300020069 Bacteria 2673
51 Ga0206356_10042668 3300020070 Bacteria 3283
52 Ga0206353_11314411 3300020082 Bacteria 13764
53 Ga0206353_11672416 3300020082 Bacteria 3208
54 Ga0209566_100149 3300025225 Bacteria 81626
55 Ga0209674_100001 3300025226 Bacteria 4013750
56 Ga0209672_100006 3300025228 Bacteria 1004497
57 Ga0209147_100357 3300025229 Bacteria 32905
58 Ga0209563_100001 3300025230 Bacteria 4013775
59 Ga0209563_102024 3300025230 Bacteria 4832
60 Ga0207427_100010 3300025231 Bacteria 648610
61 Ga0209258_104385 3300025242 Bacteria 2693
62 Ga0209646_1000167 3300025246 Bacteria 87036
63 Ga0209677_100001 3300025253 Bacteria 4013787
64 Ga0209677_101652 3300025253 Bacteria 9381
65 Ga0209148_1000015 3300025254 Bacteria 850103
66 Ga0209233_1000001 3300025261 Bacteria 2992747
67 Ga0209455_1000013 3300025272 Bacteria 850103
68 Ga0209455_1001701 3300025272 Bacteria 9430
69 Ga0207656_10000002 3300025321 Bacteria 792178
70 Ga0207655_1002025 3300025728 Bacteria 17139
71 Ga0207705_10000006 3300025909 Bacteria 657147
72 Ga0207705_10001134 3300025909 Bacteria 21687
73 Ga0207705_10009929 3300025909 Bacteria 6930
74 Ga0207705_10041790 3300025909 Bacteria 3289
75 Ga0207654_10000001 3300025911 Bacteria 1816198
76 Ga0207707_10000733 3300025912 Bacteria 32475
77 Ga0207695_10007486 3300025913 Bacteria 13870
78 Ga0207671_10000002 3300025914 Bacteria 1144816
79 Ga0207671_10014666 3300025914 Bacteria 6181
80 Ga0207660_10007232 3300025917 Bacteria 7186
81 Ga0207657_10060887 3300025919 Bacteria 3239
82 Ga0207652_10000975 3300025921 Bacteria 26522
83 Ga0207652_10113819 3300025921 Bacteria 2402
84 Ga0207694_10000138 3300025924 Bacteria 74645
85 Ga0207687_10027689 3300025927 Bacteria 3804
86 Ga0207644_10035611 3300025931 Bacteria 3489
87 Ga0207690_10000396 3300025932 Bacteria 28762
88 Ga0207690_10005863 3300025932 Bacteria 7271
89 Ga0207690_10035305 3300025932 Bacteria 3229
90 Ga0207711_10003792 3300025941 Bacteria 13002
91 Ga0207661_10067788 3300025944 Bacteria 2903
92 Ga0207667_10002967 3300025949 Bacteria 21074
93 Ga0207667_10007536 3300025949 Bacteria 13060
94 Ga0207667_10092848 3300025949 Bacteria 3117
95 Ga0207667_10099826 3300025949 Bacteria 2995
96 Ga0207703_10006652 3300026035 Bacteria 9221
97 Ga0207639_10050638 3300026041 Bacteria 3155
98 Ga0207702_10018640 3300026078 Bacteria 5742
99 Ga0207676_10045487 3300026095 Bacteria 3392
100 Ga0207674_10007607 3300026116 Bacteria 12624
101 Ga0207674_10091774 3300026116 Bacteria 3027
102 Ga0207698_10000489 3300026142 Bacteria 23073
103 Ga0207698_10001347 3300026142 Bacteria 14312
104 Ga0207698_10058663 3300026142 Bacteria 2984
105 Ga0307514_10006836 3300031649 Bacteria 9877
106 Ga0307406_10000187 3300031901 Bacteria 36987
107 Ga0307406_10000973 3300031901 Bacteria 16000
108 Ga0307406_10001127 3300031901 Bacteria 14927
109 Ga0307406_10043329 3300031901 Bacteria 2814
110 Ga0395899_0001789 3300037312 Bacteria 17812
111 Ga0395899_0023295 3300037312 Bacteria 4693
112 Ga0395899_0029741 3300037312 Bacteria 4109
113 Ga0395900_0002758 3300037418 Bacteria 19191
114 Ga0395898_0000015 3300037466 Bacteria 439819
115 Ga0395901_0050960 3300038443 Bacteria 4302
116 Ga0395901_0058335 3300038443 Bacteria 4015
117 Ga0466972_0034622 3300044658 Bacteria 2473
118 Ga0466972_0041633 3300044658 Bacteria 2236
119 Ga0466965_0004773 3300044683 Bacteria 6044
120 Ga0466970_0000059 3300044765 Bacteria 42863
121 Ga0466970_0009651 3300044765 Bacteria 4882
122 Ga0466970_0055724 3300044765 Bacteria 2111
123 Ga0466960_0001242 3300044901 Bacteria 9224
124 Ga0466960_0019814 3300044901 Bacteria 2970
125 Ga0466960_0021745 3300044901 Bacteria 2860
126 Ga0495627_000753 3300046453 Bacteria 24115
127 Ga0495590_0001505 3300046457 Bacteria 10015
128 Ga0495650_0003791 3300046471 Bacteria 10772
129 Ga0496100_0008296 3300048903 Bacteria 5790
130 Ga0496100_0046312 3300048903 Bacteria 2795
131 Ga0496105_0014715 3300048908 Bacteria 6228
132 Ga0496105_0034016 3300048908 Bacteria 4190
133 Ga0496105_0136936 3300048908 Bacteria 2017
134 Ga0496108_0030552 3300048911 Bacteria 4465
135 Ga0496110_0011923 3300048913 Bacteria 7141
136 Ga0496114_0009541 3300048917 Bacteria 7701
137 Ga0496114_0019255 3300048917 Bacteria 5529
138 Ga0496114_0060157 3300048917 Bacteria 3174
139 Ga0496115_0008211 3300048918 Bacteria 7714
140 Ga0496115_0011698 3300048918 Bacteria 6588
141 Ga0496115_0092914 3300048918 Bacteria 2467
142 Ga0496117_0000128 3300048920 Bacteria 166039
143 Ga0496117_0000413 3300048920 Bacteria 71922
144 Ga0496117_0001712 3300048920 Bacteria 30358
145 Ga0496117_0010038 3300048920 Bacteria 8699
146 Ga0496117_0018747 3300048920 Bacteria 5715
147 Ga0496118_0003883 3300048921 Bacteria 18347
148 Ga0496118_0004711 3300048921 Bacteria 15973
149 Ga0496118_0008425 3300048921 Bacteria 10659
150 Ga0496118_0011381 3300048921 Bacteria 8691
151 Ga0496118_0015523 3300048921 Bacteria 7046
152 Ga0496118_0037933 3300048921 Bacteria 3870
153 Ga0496119_0001541 3300048922 Bacteria 27533
154 Ga0496119_0002202 3300048922 Bacteria 21781
155 Ga0496119_0002210 3300048922 Bacteria 21740
156 Ga0496119_0002266 3300048922 Bacteria 21390
157 Ga0496120_0001021 3300048923 Bacteria 37451
158 Ga0496120_0001805 3300048923 Bacteria 24026
159 Ga0496120_0006127 3300048923 Bacteria 9325
160 Ga0496120_0011788 3300048923 Bacteria 5983
161 Ga0496122_0000054 3300048925 Bacteria 259135
162 Ga0496122_0000240 3300048925 Bacteria 123001
163 Ga0496122_0001724 3300048925 Bacteria 33920
164 Ga0496122_0026051 3300048925 Bacteria 5058
165 Ga0496122_0041255 3300048925 Bacteria 3652
166 Ga0496123_0000039 3300048926 Bacteria 259107
167 Ga0496123_0000076 3300048926 Bacteria 194050
168 Ga0496123_0020396 3300048926 Bacteria 5186
169 Ga0496124_0003816 3300048927 Bacteria 18081
170 Ga0496124_0011606 3300048927 Bacteria 8793
171 Ga0496124_0013590 3300048927 Bacteria 7939
172 Ga0496124_0032849 3300048927 Bacteria 4576
173 Ga0496124_0073197 3300048927 Bacteria 2836
174 Ga0496125_0000061 3300048928 Bacteria 262739
175 Ga0496125_0000640 3300048928 Bacteria 58381
176 Ga0496125_0007492 3300048928 Bacteria 11609
177 Ga0496125_0035904 3300048928 Bacteria 4338
178 Ga0496125_0050904 3300048928 Bacteria 3423
179 Ga0496126_0001161 3300048929 Bacteria 43559
180 Ga0496126_0002107 3300048929 Bacteria 27862
181 Ga0496126_0002895 3300048929 Bacteria 22382
182 Ga0496126_0009186 3300048929 Bacteria 10546
183 Ga0496126_0055570 3300048929 Bacteria 3581
184 Ga0496126_0123948 3300048929 Bacteria 2238
185 Ga0501031_0009551 3300049568 Bacteria 6316
186 Ga0501031_0041162 3300049568 Bacteria 3017
187 Ga0501032_0090422 3300049569 Bacteria 2031
188 Ga0501033_0008790 3300049570 Bacteria 7807
189 Ga0501033_0021551 3300049570 Bacteria 4861
190 Ga0501033_0050191 3300049570 Bacteria 3096
191 Ga0501034_0002427 3300049571 Bacteria 22541
192 Ga0501034_0007413 3300049571 Bacteria 11676
193 Ga0501034_0022546 3300049571 Bacteria 6416
194 Ga0501034_0026446 3300049571 Bacteria 5909
195 Ga0501034_0076306 3300049571 Bacteria 3358
196 Ga0501034_0094700 3300049571 Bacteria 2983
197 Ga0501034_0097099 3300049571 Bacteria 2942
198 Ga0501034_0220845 3300049571 Bacteria 1847
199 Ga0501036_0011634 3300049572 Bacteria 7293
200 Ga0501036_0187491 3300049572 Bacteria 1741
201 Ga0501037_0026734 3300049573 Bacteria 4264
202 Ga0501037_0056511 3300049573 Bacteria 2866
203 Ga0501037_0110769 3300049573 Bacteria 1978
204 Ga0501038_0007996 3300049574 Bacteria 9746
205 Ga0501039_0008631 3300049575 Bacteria 7764
206 Ga0501039_0026779 3300049575 Bacteria 4431
207 Ga0501042_0001121 3300049578 Bacteria 15423
208 Ga0501043_0020747 3300049579 Bacteria 5154
209 Ga0501043_0097482 3300049579 Bacteria 2311
210 Ga0501046_0007759 3300049580 Bacteria 9414
211 Ga0501046_0045552 3300049580 Bacteria 3484
212 Ga0501047_0003353 3300049581 Bacteria 15171
213 Ga0501047_0006434 3300049581 Bacteria 11052
214 Ga0501047_0047523 3300049581 Bacteria 4145
215 Ga0501048_0002794 3300049582 Bacteria 13327
216 Ga0501070_0000172 3300049586 Bacteria 59735
217 Ga0501070_0003178 3300049586 Bacteria 14279
218 Ga0501070_0011070 3300049586 Bacteria 7613
219 Ga0501070_0015076 3300049586 Bacteria 6505
220 Ga0501070_0072863 3300049586 Bacteria 2843
221 Ga0501070_0127571 3300049586 Bacteria 2102
222 Ga0501071_0000694 3300049587 Bacteria 17628
223 Ga0501073_0000788 3300049589 Bacteria 22551
224 Ga0501073_0056815 3300049589 Bacteria 2737
225 Ga0501083_0000003 3300049744 Bacteria 235949
226 Ga0501035_0007821 3300049822 Bacteria 9989
227 Ga0501035_0026523 3300049822 Bacteria 5300
228 Ga0501035_0079478 3300049822 Bacteria 2897
229 Ga0501044_0008083 3300049823 Bacteria 11549
230 Ga0501044_0012411 3300049823 Bacteria 9225
231 Ga0501044_0031965 3300049823 Bacteria 5533
232 Ga0501045_0012087 3300049824 Bacteria 6074
233 nmdc:mga00v17_55829_c1 3300050491 Bacteria 2413
234 nmdc:mga0yw44_12751_c1 3300050492 Bacteria 4395
235 nmdc:mga0sz30_17331_c1 3300050516 Bacteria 2871
236 Ga0500635_0000132 3300053080 Bacteria 43287
237 Ga0500635_0000823 3300053080 Bacteria 7657
238 Ga0500643_000656 3300053087 Bacteria 23157
239 Ga0500651_0001015 3300053093 Bacteria 13799
240 Ga0500556_0000001 3300053104 Bacteria 1135060
241 Ga0500593_001452 3300053117 Bacteria 8525
242 Ga0500559_0000131 3300053136 Bacteria 57864
243 Ga0500559_0000537 3300053136 Bacteria 26393
244 Ga0500559_0002873 3300053136 Bacteria 8696
245 Ga0500568_0000006 3300053139 Bacteria 522235
246 Ga0500573_0027700 3300053140 Bacteria 3260
247 Ga0500573_0041074 3300053140 Bacteria 2671
248 Ga0500616_0000021 3300053153 Bacteria 484527
249 Ga0500616_0000719 3300053153 Bacteria 38307
250 Ga0500620_000315 3300053155 Bacteria 9120

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0187491 Ga0501036_0187491_43_1722 545
2 3300049586 Ga0501070_0127571 Ga0501070_0127571_32_1741 555
3 3300044901 Ga0466960_0001242 Ga0466960_0001242_5191_6996 566
4 3300049571 Ga0501034_0220845 Ga0501034_0220845_15_1760 571
5 3300037312 Ga0395899_0001789 Ga0395899_0001789_2731_4593 582
6 3300048903 Ga0496100_0008296 Ga0496100_0008296_14_1813 587
7 3300053093 Ga0500651_0001015 Ga0500651_0001015_7207_9147 598
8 3300038443 Ga0395901_0058335 Ga0395901_0058335_1990_3906 603
9 3300031901 Ga0307406_10043329 Ga0307406_100433292 604
10 3300049569 Ga0501032_0090422 Ga0501032_0090422_59_1969 605
11 3300053155 Ga0500620_000315 Ga0500620_000315_5321_7261 613
12 3300044901 Ga0466960_0019814 Ga0466960_0019814_569_2494 620
13 3300048922 Ga0496119_0002210 Ga0496119_0002210_4027_5970 620
14 3300048923 Ga0496120_0001805 Ga0496120_0001805_281_2224 620
15 iso_pu_bacteria 2857710386 2857711536 620
16 3300049571 Ga0501034_0094700 Ga0501034_0094700_32_1939 621
17 3300049580 Ga0501046_0007759 Ga0501046_0007759_5930_7837 621
18 3300049823 Ga0501044_0012411 Ga0501044_0012411_5055_6962 621
19 3300005366 Ga0070659_100001103 Ga0070659_1000011032 622
20 3300005543 Ga0070672_100012953 Ga0070672_1000129532 622
21 3300005618 Ga0068864_100039326 Ga0068864_1000393263 622
22 3300013105 Ga0157369_10000757 Ga0157369_1000075730 622
23 3300014325 Ga0163163_10003936 Ga0163163_100039366 622
24 3300025931 Ga0207644_10035611 Ga0207644_100356112 622
25 3300025932 Ga0207690_10000396 Ga0207690_1000039618 622
26 3300026041 Ga0207639_10050638 Ga0207639_100506382 622
27 3300026095 Ga0207676_10045487 Ga0207676_100454873 622
28 3300048921 Ga0496118_0037933 Ga0496118_0037933_1232_3181 622
29 3300003752 Ga0055539_1000008 Ga0055539_100000878 623
30 3300003756 Ga0055533_1000001 Ga0055533_1000001992 623
31 3300003759 Ga0055525_1000555 Ga0055525_10005553 623
32 3300005327 Ga0070658_10000211 Ga0070658_1000021129 623
33 3300005336 Ga0070680_100000583 Ga0070680_1000005835 623
34 3300005530 Ga0070679_100000620 Ga0070679_10000062015 623
35 3300009177 Ga0105248_10000876 Ga0105248_100008764 623
36 3300020070 Ga0206356_10042668 Ga0206356_100426682 623
37 3300020082 Ga0206353_11314411 Ga0206353_113144115 623
38 3300025225 Ga0209566_100149 Ga0209566_10014971 623
39 3300025226 Ga0209674_100001 Ga0209674_100001992 623
40 3300025230 Ga0209563_100001 Ga0209563_100001992 623
41 3300025253 Ga0209677_100001 Ga0209677_100001992 623
42 3300025909 Ga0207705_10009929 Ga0207705_100099293 623
43 3300025912 Ga0207707_10000733 Ga0207707_1000073313 623
44 3300025917 Ga0207660_10007232 Ga0207660_100072325 623
45 3300025921 Ga0207652_10000975 Ga0207652_1000097523 623
46 3300025941 Ga0207711_10003792 Ga0207711_100037923 623
47 3300053080 Ga0500635_0000823 Ga0500635_0000823_1237_3177 623
48 3300013105 Ga0157369_10047274 Ga0157369_100472743 624
49 3300013306 Ga0163162_10038382 Ga0163162_100383822 624
50 3300013307 Ga0157372_10122586 Ga0157372_101225861 624
51 3300020069 Ga0197907_10660401 Ga0197907_106604013 624
52 3300025914 Ga0207671_10014666 Ga0207671_100146664 624
53 3300025949 Ga0207667_10099826 Ga0207667_100998262 624
54 3300044658 Ga0466972_0034622 Ga0466972_0034622_356_2308 624
55 3300048913 Ga0496110_0011923 Ga0496110_0011923_435_2387 624
56 3300048917 Ga0496114_0060157 Ga0496114_0060157_46_1998 624
57 3300048918 Ga0496115_0008211 Ga0496115_0008211_3891_5843 624
58 3300048922 Ga0496119_0002266 Ga0496119_0002266_5536_7476 624
59 3300049822 Ga0501035_0079478 Ga0501035_0079478_873_2825 624
60 3300003578 Ga0006562J51391_1082870 Ga0006562J51391_10828702 625
61 3300003578 Ga0006562J51391_1082871 Ga0006562J51391_10828713 625
62 3300005329 Ga0070683_100105407 Ga0070683_1001054072 625
63 3300025944 Ga0207661_10067788 Ga0207661_100677882 625
64 3300044658 Ga0466972_0041633 Ga0466972_0041633_213_2150 625
65 3300044901 Ga0466960_0021745 Ga0466960_0021745_768_2705 625
66 3300048903 Ga0496100_0046312 Ga0496100_0046312_49_2001 625
67 3300048908 Ga0496105_0014715 Ga0496105_0014715_155_2107 625
68 3300049568 Ga0501031_0041162 Ga0501031_0041162_625_2562 625
69 3300049570 Ga0501033_0050191 Ga0501033_0050191_309_2249 625
70 3300049573 Ga0501037_0056511 Ga0501037_0056511_326_2266 625
71 3300003760 Ga0055527_1000001 Ga0055527_1000001474 626
72 3300003763 Ga0055529_1000018 Ga0055529_100001822 626
73 3300013105 Ga0157369_10009087 Ga0157369_100090876 626
74 3300025228 Ga0209672_100006 Ga0209672_100006502 626
75 3300025229 Ga0209147_100357 Ga0209147_10035712 626
76 3300025230 Ga0209563_102024 Ga0209563_1020243 626
77 3300025242 Ga0209258_104385 Ga0209258_1043852 626
78 3300025253 Ga0209677_101652 Ga0209677_1016526 626
79 3300025254 Ga0209148_1000015 Ga0209148_1000015346 626
80 3300025272 Ga0209455_1000013 Ga0209455_1000013346 626
81 3300025949 Ga0207667_10092848 Ga0207667_100928482 626
82 3300037312 Ga0395899_0023295 Ga0395899_0023295_1669_3618 626
83 3300037312 Ga0395899_0029741 Ga0395899_0029741_26_1978 626
84 3300037418 Ga0395900_0002758 Ga0395900_0002758_7827_9776 626
85 3300037466 Ga0395898_0000015 Ga0395898_0000015_28435_30384 626
86 3300044765 Ga0466970_0009651 Ga0466970_0009651_1014_2972 626
87 3300046471 Ga0495650_0003791 Ga0495650_0003791_3532_5472 626
88 3300048920 Ga0496117_0018747 Ga0496117_0018747_2475_4430 626
89 3300049568 Ga0501031_0009551 Ga0501031_0009551_1167_3140 626
90 3300049571 Ga0501034_0022546 Ga0501034_0022546_3506_5479 626
91 3300049572 Ga0501036_0011634 Ga0501036_0011634_1932_3905 626
92 3300049574 Ga0501038_0007996 Ga0501038_0007996_2776_4749 626
93 3300049575 Ga0501039_0008631 Ga0501039_0008631_1931_3904 626
94 3300049579 Ga0501043_0020747 Ga0501043_0020747_2243_4216 626
95 3300049581 Ga0501047_0047523 Ga0501047_0047523_59_2032 626
96 3300049582 Ga0501048_0002794 Ga0501048_0002794_2232_4205 626
97 3300049586 Ga0501070_0000172 Ga0501070_0000172_20137_22089 626
98 3300049589 Ga0501073_0056815 Ga0501073_0056815_569_2542 626
99 3300049824 Ga0501045_0012087 Ga0501045_0012087_584_2557 626
100 3300005327 Ga0070658_10001109 Ga0070658_1000110920 627
101 3300013105 Ga0157369_10052979 Ga0157369_100529792 627
102 3300025909 Ga0207705_10001134 Ga0207705_1000113411 627
103 3300049586 Ga0501070_0015076 Ga0501070_0015076_206_2164 627
104 iso_pu_bacteria 2751185788 2753301874 627
105 iso_pu_bacteria 2904430863 2904432996 627
106 iso_pu_bacteria 2904501621 2904502871 627
107 iso_pu_bacteria 2908674828 2908677904 627
108 iso_pu_bacteria 2909074476 2909075009 627
109 iso_pu_bacteria 2919039151 2919042316 627
110 iso_pu_bacteria 2919042368 2919046137 627
111 iso_pu_bacteria 2928104781 2928107416 627
112 iso_pu_bacteria 2928500415 2928503628 627
113 iso_pu_bacteria 2939660829 2939661170 627
114 iso_pu_bacteria 2984551494 2984554026 627
115 3300025272 Ga0209455_1001701 Ga0209455_10017013 628
116 iso_pu_bacteria 2995726249 2995728017 628
117 3300025932 Ga0207690_10035305 Ga0207690_100353052 629
118 3300049589 Ga0501073_0000788 Ga0501073_0000788_2527_4479 629
119 iso_pu_bacteria 8055034563 8055036030 629
120 3300048908 Ga0496105_0034016 Ga0496105_0034016_1694_3631 630
121 3300048927 Ga0496124_0032849 Ga0496124_0032849_113_2050 630
122 iso_pu_bacteria 2585428094 2587863412 630
123 iso_pu_bacteria 8057345674 8057348811 630
124 3300013105 Ga0157369_10167132 Ga0157369_101671322 631
125 3300020082 Ga0206353_11672416 Ga0206353_116724162 631
126 3300044765 Ga0466970_0055724 Ga0466970_0055724_61_1995 631
127 3300048920 Ga0496117_0010038 Ga0496117_0010038_6684_8618 631
128 3300048921 Ga0496118_0011381 Ga0496118_0011381_6677_8611 631
129 3300048927 Ga0496124_0003816 Ga0496124_0003816_8642_10576 631
130 3300048929 Ga0496126_0123948 Ga0496126_0123948_333_2228 631
131 iso_pu_bacteria 8055037949 8055038485 631
132 iso_pu_bacteria 2643221572 2643875038 632
133 iso_pu_bacteria 2643221632 2644183419 632
134 iso_pu_bacteria 2643221669 2644382094 632
135 iso_pu_bacteria 2895660088 2895661164 632
136 iso_pu_bacteria 2966924647 2966924930 632
137 iso_pu_bacteria 8004212874 8004214275 632
138 3300048929 Ga0496126_0001161 Ga0496126_0001161_39548_41491 633
139 iso_pu_bacteria 2643221649 2644280561 633
140 3300005327 Ga0070658_10006280 Ga0070658_100062805 634
141 3300005338 Ga0068868_100065683 Ga0068868_1000656832 634
142 3300005366 Ga0070659_100000460 Ga0070659_10000046019 634
143 3300005367 Ga0070667_100036843 Ga0070667_1000368432 634
144 3300005539 Ga0068853_100073188 Ga0068853_1000731882 634
145 3300005577 Ga0068857_100000938 Ga0068857_10000093811 634
146 3300005578 Ga0068854_100097719 Ga0068854_1000977192 634
147 3300005616 Ga0068852_100007288 Ga0068852_1000072882 634
148 3300005834 Ga0068851_10000003 Ga0068851_10000003189 634
149 3300005842 Ga0068858_100000114 Ga0068858_10000011475 634
150 3300009545 Ga0105237_10001056 Ga0105237_1000105615 634
151 3300009551 Ga0105238_10002459 Ga0105238_100024595 634
152 3300010375 Ga0105239_10129106 Ga0105239_101291062 634
153 3300025321 Ga0207656_10000002 Ga0207656_1000000248 634
154 3300025909 Ga0207705_10041790 Ga0207705_100417902 634
155 3300025914 Ga0207671_10000002 Ga0207671_10000002342 634
156 3300025919 Ga0207657_10060887 Ga0207657_100608873 634
157 3300025924 Ga0207694_10000138 Ga0207694_1000013824 634
158 3300025927 Ga0207687_10027689 Ga0207687_100276893 634
159 3300025932 Ga0207690_10005863 Ga0207690_100058634 634
160 3300025949 Ga0207667_10002967 Ga0207667_1000296715 634
161 3300025949 Ga0207667_10007536 Ga0207667_100075365 634
162 3300026035 Ga0207703_10006652 Ga0207703_100066525 634
163 3300026116 Ga0207674_10007607 Ga0207674_100076072 634
164 3300026142 Ga0207698_10000489 Ga0207698_100004895 634
165 3300026142 Ga0207698_10001347 Ga0207698_100013477 634
166 3300026142 Ga0207698_10058663 Ga0207698_100586632 634
167 3300049571 Ga0501034_0076306 Ga0501034_0076306_474_2414 634
168 3300049573 Ga0501037_0026734 Ga0501037_0026734_58_1998 634
169 3300049581 Ga0501047_0003353 Ga0501047_0003353_2049_3989 634
170 3300049822 Ga0501035_0007821 Ga0501035_0007821_152_2092 634
171 3300049823 Ga0501044_0008083 Ga0501044_0008083_908_2848 634
172 3300053153 Ga0500616_0000021 Ga0500616_0000021_418291_420231 634
173 iso_pu_bacteria 2643221616 2644097167 634
174 iso_pu_bacteria 2643221635 2644199200 634
175 iso_pu_bacteria 2721755702 2723641932 634
176 iso_pu_bacteria 2844841374 2844842665 634
177 iso_pu_bacteria 2852643534 2852645560 634
178 iso_pu_bacteria 2857729791 2857729793 634
179 iso_pu_bacteria 2857733635 2857735758 634
180 iso_pu_bacteria 2862993130 2862996397 634
181 iso_pu_bacteria 2870622029 2870623637 634
182 iso_pu_bacteria 2884763398 2884765630 634
183 iso_pu_bacteria 2919055335 2919058350 634
184 iso_pu_bacteria 2919523602 2919524740 634
185 iso_pu_bacteria 2928121344 2928123043 634
186 iso_pu_bacteria 2928153084 2928156336 634
187 iso_pu_bacteria 2935409751 2935411274 634
188 iso_pu_bacteria 2964326757 2964326771 634
189 iso_pu_bacteria 2966921586 2966922669 634
190 iso_pu_bacteria 8056037122 8056037431 634
191 3300053117 Ga0500593_001452 Ga0500593_001452_506_2449 635
192 3300053136 Ga0500559_0000131 Ga0500559_0000131_5725_7665 635
193 3300053136 Ga0500559_0000537 Ga0500559_0000537_375_2318 635
194 3300053136 Ga0500559_0002873 Ga0500559_0002873_2945_4885 635
195 3300053140 Ga0500573_0027700 Ga0500573_0027700_419_2374 635
196 3300048928 Ga0496125_0000061 Ga0496125_0000061_136406_138358 636
197 3300025921 Ga0207652_10113819 Ga0207652_101138192 637
198 3300031649 Ga0307514_10006836 Ga0307514_100068368 637
199 3300048925 Ga0496122_0001724 Ga0496122_0001724_29914_31854 637
200 3300049575 Ga0501039_0026779 Ga0501039_0026779_1661_3613 637
201 3300002772 JGI25164J39214_1000358 JGI25164J39214_100035823 638
202 3300003214 JGI25165J46597_1000004 JGI25165J46597_1000004510 638
203 3300009093 Ga0105240_10002075 Ga0105240_1000207518 638
204 3300025231 Ga0207427_100010 Ga0207427_10001072 638
205 3300025261 Ga0209233_1000001 Ga0209233_10000011878 638
206 3300025911 Ga0207654_10000001 Ga0207654_100000011806 638
207 3300025913 Ga0207695_10007486 Ga0207695_100074865 638
208 3300026078 Ga0207702_10018640 Ga0207702_100186404 638
209 3300026116 Ga0207674_10091774 Ga0207674_100917742 638
210 3300031901 Ga0307406_10000187 Ga0307406_1000018716 638
211 3300038443 Ga0395901_0050960 Ga0395901_0050960_593_2539 638
212 3300046457 Ga0495590_0001505 Ga0495590_0001505_3053_5002 638
213 3300048911 Ga0496108_0030552 Ga0496108_0030552_1219_3195 638
214 3300048917 Ga0496114_0009541 Ga0496114_0009541_5592_7547 638
215 3300048917 Ga0496114_0019255 Ga0496114_0019255_173_2149 638
216 3300048918 Ga0496115_0011698 Ga0496115_0011698_1042_3003 638
217 3300048918 Ga0496115_0092914 Ga0496115_0092914_75_2036 638
218 3300048920 Ga0496117_0000128 Ga0496117_0000128_51422_53404 638
219 3300048921 Ga0496118_0004711 Ga0496118_0004711_10080_12017 638
220 3300048925 Ga0496122_0041255 Ga0496122_0041255_1432_3414 638
221 3300048926 Ga0496123_0020396 Ga0496123_0020396_2713_4695 638
222 3300049570 Ga0501033_0021551 Ga0501033_0021551_1967_3913 638
223 3300049571 Ga0501034_0007413 Ga0501034_0007413_4363_6336 638
224 3300049571 Ga0501034_0026446 Ga0501034_0026446_3931_5883 638
225 3300049573 Ga0501037_0110769 Ga0501037_0110769_20_1966 638
226 3300049579 Ga0501043_0097482 Ga0501043_0097482_320_2266 638
227 3300049580 Ga0501046_0045552 Ga0501046_0045552_672_2618 638
228 3300049581 Ga0501047_0006434 Ga0501047_0006434_6129_8102 638
229 3300049586 Ga0501070_0011070 Ga0501070_0011070_2571_4523 638
230 3300049586 Ga0501070_0072863 Ga0501070_0072863_20_1966 638
231 3300049587 Ga0501071_0000694 Ga0501071_0000694_10021_11973 638
232 3300049822 Ga0501035_0026523 Ga0501035_0026523_55_2028 638
233 3300049823 Ga0501044_0031965 Ga0501044_0031965_867_2813 638
234 3300053080 Ga0500635_0000132 Ga0500635_0000132_38104_40041 638
235 3300053087 Ga0500643_000656 Ga0500643_000656_5601_7547 638
236 3300053104 Ga0500556_0000001 Ga0500556_0000001_355441_357381 638
237 3300053139 Ga0500568_0000006 Ga0500568_0000006_365745_367685 638
238 3300053140 Ga0500573_0041074 Ga0500573_0041074_643_2622 638
239 3300053153 Ga0500616_0000719 Ga0500616_0000719_29011_30957 638
240 iso_pu_bacteria 2773857763 2774399570 638
241 iso_pu_bacteria 2808606372 2808901887 638
242 iso_pu_bacteria 2821268502 2821269977 638
243 iso_pu_bacteria 2919443155 2919446317 638
244 iso_pu_bacteria 2939657138 2939658078 638
245 3300003578 Ga0006562J51391_1129022 Ga0006562J51391_11290222 639
246 3300044683 Ga0466965_0004773 Ga0466965_0004773_3402_5360 639
247 3300049570 Ga0501033_0008790 Ga0501033_0008790_529_2469 639
248 3300049578 Ga0501042_0001121 Ga0501042_0001121_2075_4015 639
249 3300049744 Ga0501083_0000003 Ga0501083_0000003_79247_81187 639
250 iso_pu_bacteria 2643221546 2643752095 639
251 iso_pu_bacteria 2643221549 2643767873 639
252 iso_pu_bacteria 2643221566 2643848328 639
253 iso_pu_bacteria 2643221575 2643885481 639
254 iso_pu_bacteria 2643221597 2643995769 639
255 iso_pu_bacteria 2643221619 2644111263 639
256 iso_pu_bacteria 2808606306 2808631224 639
257 iso_pu_bacteria 2808606447 2809227291 639
258 iso_pu_bacteria 2852632344 2852633328 639
259 iso_pu_bacteria 2906799679 2906802996 639
260 3300048921 Ga0496118_0008425 Ga0496118_0008425_1849_3813 640
261 3300048922 Ga0496119_0001541 Ga0496119_0001541_1738_3702 640
262 3300048925 Ga0496122_0000240 Ga0496122_0000240_111366_113330 640
263 3300048926 Ga0496123_0000076 Ga0496123_0000076_48816_50780 640
264 3300048928 Ga0496125_0050904 Ga0496125_0050904_1021_2985 640
265 3300048929 Ga0496126_0055570 Ga0496126_0055570_176_2140 640
266 iso_pu_bacteria 2757320536 2758226166 640
267 iso_pu_bacteria 2773857758 2774380483 640
268 iso_pu_bacteria 2811994872 2812323079 640
269 iso_pu_bacteria 2904509784 2904512053 640
270 iso_pu_bacteria 2908678064 2908680970 640
271 iso_pu_bacteria 2919069694 2919072560 640
272 iso_pu_bacteria 2974324384 2974326647 640
273 iso_pu_bacteria 2977228692 2977231354 640
274 iso_pu_bacteria 2977236895 2977240135 640
275 iso_pu_bacteria 2977264416 2977266577 640
276 iso_pu_bacteria 2984542743 2984545592 640
277 iso_pu_bacteria 8016254467 8016257603 640
278 3300013104 Ga0157370_10001218 Ga0157370_1000121817 641
279 3300025909 Ga0207705_10000006 Ga0207705_10000006314 641
280 iso_pu_bacteria 2585428157 2588108466 641
281 iso_pu_bacteria 2773857759 2774384482 641
282 iso_pu_bacteria 2808606368 2808885614 641
283 iso_pu_bacteria 2857720070 2857721131 641
284 iso_pu_bacteria 2870628048 2870630323 641
285 iso_pu_bacteria 2928090899 2928092220 641
286 iso_pu_bacteria 2977251589 2977253930 641
287 iso_pu_bacteria 2984580707 2984581006 641
288 iso_pu_bacteria 8045830549 8045831556 641
289 3300005347 Ga0070668_100103121 Ga0070668_1001031211 642
290 3300006038 Ga0075365_10012355 Ga0075365_100123552 642
291 3300006178 Ga0075367_10007877 Ga0075367_100078772 642
292 3300013250 Ga0171462_1003 Ga0171462_1003433 642
293 3300050492 nmdc:mga0yw44_12751_c1 nmdc:mga0yw44_12751_c1_1518_3482 642
294 iso_pu_bacteria 2643221542 2643733610 642
295 iso_pu_bacteria 2643221553 2643785830 642
296 iso_pu_bacteria 2643221630 2644170185 642
297 iso_pu_bacteria 2643221724 2644680238 642
298 iso_pu_bacteria 2728369380 2730229689 642
299 iso_pu_bacteria 2747842429 2747951749 642
300 iso_pu_bacteria 2852646457 2852647332 642
301 iso_pu_bacteria 2852663356 2852665314 642
302 iso_pu_bacteria 2857723135 2857723859 642
303 iso_pu_bacteria 2919395869 2919396629 642
304 iso_pu_bacteria 2945968032 2945971808 642
305 iso_pu_bacteria 2946033335 2946033746 642
306 iso_pu_bacteria 2946041624 2946044265 642
307 iso_pu_bacteria 2946080515 2946080891 642
308 iso_pu_bacteria 8004182704 8004185113 642
309 iso_pu_bacteria 2833709550 2833710921 643
310 3300048920 Ga0496117_0000413 Ga0496117_0000413_41876_43825 644
311 3300048922 Ga0496119_0002202 Ga0496119_0002202_3850_5808 644
312 3300048923 Ga0496120_0001021 Ga0496120_0001021_22182_24131 644
313 3300048923 Ga0496120_0006127 Ga0496120_0006127_7301_9250 644
314 3300048925 Ga0496122_0026051 Ga0496122_0026051_66_2015 644
315 3300048927 Ga0496124_0011606 Ga0496124_0011606_215_2164 644
316 3300048929 Ga0496126_0002895 Ga0496126_0002895_14145_16094 644
317 3300049586 Ga0501070_0003178 Ga0501070_0003178_1037_2995 644
318 3300006038 Ga0075365_10004065 Ga0075365_100040653 645
319 3300009036 Ga0105244_10016949 Ga0105244_100169492 645
320 3300025728 Ga0207655_1002025 Ga0207655_10020259 645
321 3300048908 Ga0496105_0136936 Ga0496105_0136936_13_2004 645
322 3300048921 Ga0496118_0003883 Ga0496118_0003883_4910_6901 645
323 3300048923 Ga0496120_0011788 Ga0496120_0011788_56_2047 645
324 3300048925 Ga0496122_0000054 Ga0496122_0000054_82201_84192 645
325 3300048926 Ga0496123_0000039 Ga0496123_0000039_82201_84192 645
326 3300048927 Ga0496124_0013590 Ga0496124_0013590_2655_4643 645
327 3300048928 Ga0496125_0007492 Ga0496125_0007492_3937_5928 645
328 3300048929 Ga0496126_0009186 Ga0496126_0009186_1483_3474 645
329 3300050491 nmdc:mga00v17_55829_c1 nmdc:mga00v17_55829_c1_338_2335 645
330 3300050516 nmdc:mga0sz30_17331_c1 nmdc:mga0sz30_17331_c1_584_2581 645
331 3300002738 JGI25154J39366_1001406 JGI25154J39366_10014062 646
332 3300025246 Ga0209646_1000167 Ga0209646_100016757 646
333 3300031901 Ga0307406_10000973 Ga0307406_100009733 646
334 3300031901 Ga0307406_10001127 Ga0307406_1000112711 646
335 3300044765 Ga0466970_0000059 Ga0466970_0000059_27796_29778 646
336 3300046453 Ga0495627_000753 Ga0495627_000753_13548_15488 646
337 3300048920 Ga0496117_0001712 Ga0496117_0001712_10685_12625 646
338 3300048921 Ga0496118_0015523 Ga0496118_0015523_2078_4018 646
339 3300048927 Ga0496124_0073197 Ga0496124_0073197_653_2593 646
340 3300048928 Ga0496125_0000640 Ga0496125_0000640_940_2880 646
341 3300048928 Ga0496125_0035904 Ga0496125_0035904_2254_4194 646
342 3300048929 Ga0496126_0002107 Ga0496126_0002107_13392_15332 646
343 3300049571 Ga0501034_0002427 Ga0501034_0002427_9317_11257 646
344 3300049571 Ga0501034_0097099 Ga0501034_0097099_682_2625 646

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02779

Transket_pyr

Transketolase, pyrimidine binding domain

316

482

0.98

PF02780

Transketolase_C

Transketolase, C-terminal domain

495

614

0.95

PF13292

DXP_synthase_N

1-deoxy-D-xylulose-5-phosphate synthase

4

281

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7a9h-assembly1.cif.gz_BBB truncated 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from mycobacterium tuberculosis 0.9611 1 622
7a9h-assembly1.cif.gz_BBB truncated 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from mycobacterium tuberculosis 0.9542 1 622
7a9g-assembly1.cif.gz_BBB truncated 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from mycobacterium tuberculosis with intermediate 2-acetyl-thiamine diphosphate 0.9532 3 622
7a9h-assembly1.cif.gz_AAA truncated 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from mycobacterium tuberculosis 0.9521 3 623
8ogh-assembly1.cif.gz_A truncated 1-deoxy-d-xylulose 5-phosphate synthase (dxps) from mycobacterium tuberculosis with butylacetylphosphonate (bap) bound 0.9502 3 623
ID Description Score Start End Superfamily
af_P9WNS3_497_621_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9917 501 621 3.40.50.920
af_O50408_212_377_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9914 317 478 3.40.50.970
af_I1M1A4_399_568_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.969 317 484 3.40.50.970
af_A0A0R0G7H4_1_143_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9643 344 484 3.40.50.970
af_O50408_212_377_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.956 317 478 3.40.50.970
ID Description Score Start End GO Terms
AF-J9FQZ3-F1-model_v4 Protein containing Transketolase, central region domain protein (EC 1.2.4.4) 0.9933 331 420 GO:0003863
GO:0005829
GO:0008661
GO:0016114
GO:0019288
AF-A0A6B3HXZ8-F1-model_v4 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) 0.9843 428 568 GO:0000287
GO:0005829
GO:0008661
GO:0009228
GO:0016114
GO:0019288
GO:0052865
AF-A0A4D4LPT0-F1-model_v4 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) 0.9823 323 624 GO:0000287
GO:0005829
GO:0008661
GO:0009228
GO:0016114
GO:0019288
GO:0052865
AF-A0A0F5VKA7-F1-model_v4 1-deoxy-D-xylulose-5-phosphate synthase 0.9797 489 624 GO:0005829
GO:0008661
GO:0016114
GO:0019288
AF-A0A6J6IQU4-F1-model_v4 Unannotated protein 0.9788 441 624 GO:0005829
GO:0008661
GO:0016114
GO:0019288

Feature Viewer

pLDDT pTM Quality
84.91 0.84 High
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Predicted Structure (AlphaFold2)

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