F415315

General Info

Members Datasets Scaffolds Average Seq Length
342 227 686 309

Family's Representative Sequence

Representative Sequence 3300046690|Ga0495624_0035317|Ga0495624_0035317_477_1490
Length 337
Sequence MIEPPDSPELETVGQRIHRGRSVQVILTVTLNTALDITYRVRSLRPHTAHRVTEVTERPGGKGLNVARVLAALGHEVTVTGFTGGVTGRALRDQLTDTPGMVDALIPVEGPTRRTIAVVDTTTGDTTQLNEPGPEITPGEWAAFQEAYEVLLRSASAVALCGSLPPGVPVGAYAGLIRAARAAAVPVLLDTSGEPLRRGVAARPDIVKPNTDELAELTGSHEPLQATRDARRRGAHAVVASLGAQGLLAHTPDGLWRATPPRRVHGNPTGAGDSAVAGLLSGLVEHLPWPERLARAVALSAATVLAPVAGEFDLLAYEELVNHVTVDLLLQPQVEAR

Samples

Sample ID Description Type Environment
1 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
11 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
12 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
13 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
14 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
15 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
16 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
17 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
18 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
21 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
22 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
23 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
24 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
25 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
26 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
27 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
28 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
29 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
30 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
31 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
32 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
33 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
34 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
35 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
36 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
37 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
38 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
39 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
40 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
41 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
42 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
43 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
44 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
45 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
46 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
47 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
50 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
51 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
52 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
53 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
54 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
55 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
56 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
57 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
58 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
59 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
60 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
61 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
62 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
65 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
66 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
67 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
68 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
69 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
70 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
71 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
72 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
73 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
74 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
75 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
76 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
77 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
83 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
84 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
85 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
86 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
87 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
90 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
93 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
94 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
95 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
101 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
104 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
105 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
108 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
109 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
114 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
115 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
118 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
123 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
145 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
146 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
147 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
148 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
149 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
150 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
151 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
152 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
153 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
154 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
155 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
156 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
157 2643221548 Streptomyces sp. Root55 Isolate Unclassified
158 2643221578 Streptomyces sp. Root63 Isolate Unclassified
159 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
160 2643221647 Streptomyces sp. Root369 Isolate Unclassified
161 2643221670 Streptomyces sp. Root431 Isolate Unclassified
162 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
163 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
164 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
165 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
166 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
167 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
168 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
169 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
170 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
171 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
172 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
173 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
174 2808606448 Streptomyces sp. 193411 Isolate Unclassified
175 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
176 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
177 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
178 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
179 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
180 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
181 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
182 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
183 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
184 2862574272 Streptomyces sp. AcE210 Isolate Nodule
185 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
186 2867369537 Streptomyces sp. Z26 Isolate Unclassified
187 2867428634 Streptomyces sp. RP5T Isolate Unclassified
188 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
189 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
190 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
191 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
192 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
193 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
194 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
195 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
196 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
197 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
198 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
199 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
200 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
201 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
202 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
203 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
204 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
205 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
206 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
207 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
208 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
209 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
210 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
211 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
212 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
213 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
214 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
215 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
216 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
217 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
218 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
219 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
220 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
221 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
222 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
223 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
224 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
225 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
226 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
227 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.9
Metatranscriptomes 0.29
Isolates 22.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.22
Nodule 0.58
Rhizoplane 0.88
Rhizosphere 76.9
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495624_0035317 3300046690 Bacteria 3227
2 rootH1_10001920 3300003316 Bacteria 14258
3 rootH1_10001920 3300003323 Bacteria 12125
4 rootH2_10020257 3300003320 Bacteria 5410
5 rootL2_10010247 3300003322 Bacteria 5210
6 rootH1_10002153 3300003323 Bacteria 4949
7 rootH1_10002154 3300003316 Bacteria 3761
8 rootH1_10002154 3300003323 Bacteria 7839
9 rootH1_10081499 3300003323 Bacteria 2544
10 JGI25160J50197_1032293 3300003354 Bacteria 1333
11 Ga0006562J51391_1064650 3300003578 Bacteria 3850
12 Ga0068856_100117050 3300005614 Bacteria 2666
13 Ga0075365_10180171 3300006038 Bacteria 1477
14 Ga0075367_10000717 3300006178 Bacteria 12816
15 Ga0105246_10004452 3300011119 Bacteria 8528
16 Ga0157369_10151209 3300013105 Bacteria 2453
17 Ga0157372_10339022 3300013307 Bacteria 1751
18 Ga0182008_10001280 3300014497 Bacteria 17261
19 Ga0182007_10000582 3300015262 Bacteria 21489
20 Ga0183367_1005 3300015688 Bacteria 652063
21 Ga0207426_1012343 3300025302 Bacteria 3212
22 Ga0207647_10043908 3300025904 Bacteria 2795
23 Ga0207694_10123173 3300025924 Bacteria 2072
24 Ga0209371_1023573 3300027312 Bacteria 1447
25 Ga0209371_1025186 3300027312 Bacteria 1371
26 Ga0209813_10003671 3300027866 Bacteria 3611
27 Ga0307517_10003190 3300028786 Bacteria 25757
28 Ga0307515_10005593 3300028794 Bacteria 25395
29 Ga0307515_10048336 3300028794 Bacteria 6434
30 Ga0268256_1016330 3300030500 Bacteria 2134
31 Ga0268256_1026723 3300030500 Bacteria 1447
32 Ga0307511_10000262 3300030521 Bacteria 54437
33 Ga0307511_10057190 3300030521 Bacteria 3037
34 Ga0307512_10004180 3300030522 Bacteria 16012
35 Ga0307513_10026938 3300031456 Bacteria 6612
36 Ga0307513_10057612 3300031456 Bacteria 4137
37 Ga0307509_10012491 3300031507 Bacteria 10156
38 Ga0307509_10108624 3300031507 Bacteria 2787
39 Ga0307508_10002945 3300031616 Bacteria 17606
40 Ga0307508_10008636 3300031616 Bacteria 9403
41 Ga0307508_10043432 3300031616 Bacteria 4028
42 Ga0307508_10077542 3300031616 Bacteria 2902
43 Ga0307514_10019107 3300031649 Bacteria 5612
44 Ga0307514_10030622 3300031649 Bacteria 4318
45 Ga0307514_10093531 3300031649 Bacteria 2183
46 Ga0307516_10005149 3300031730 Bacteria 15777
47 Ga0307516_10290999 3300031730 Bacteria 1312
48 Ga0307518_10018325 3300031838 Bacteria 5020
49 Ga0307507_10029078 3300033179 Bacteria 5869
50 Ga0307507_10143593 3300033179 Bacteria 1821
51 Ga0307510_10005436 3300033180 Bacteria 15167
52 Ga0307510_10024338 3300033180 Bacteria 6997
53 Ga0307510_10039588 3300033180 Bacteria 5189
54 Ga0307510_10104737 3300033180 Bacteria 2600
55 Ga0395898_0006424 3300037466 Bacteria 12555
56 Ga0395898_0037413 3300037466 Bacteria 4814
57 Ga0439436_0000208 3300041404 Bacteria 14124
58 Ga0439436_0000491 3300041404 Bacteria 10260
59 Ga0439433_0000446 3300041999 Bacteria 7582
60 Ga0439449_0019712 3300042007 Bacteria 2527
61 Ga0439457_002018 3300042014 Bacteria 5958
62 Ga0439457_002219 3300042014 Bacteria 5617
63 Ga0450894_000035 3300042131 Bacteria 19542
64 Ga0450898_000275 3300042134 Bacteria 5751
65 Ga0450899_001489 3300042135 Bacteria 2619
66 Ga0450900_004041 3300042136 Bacteria 1666
67 Ga0450903_000067 3300042138 Bacteria 20805
68 Ga0450906_001001 3300042145 Bacteria 6201
69 Ga0439458_0000619 3300042157 Bacteria 9188
70 Ga0466969_0011005 3300044656 Bacteria 4790
71 Ga0466972_0004010 3300044658 Bacteria 7335
72 Ga0466972_0004844 3300044658 Bacteria 6752
73 Ga0466972_0005754 3300044658 Bacteria 6209
74 Ga0466972_0103007 3300044658 Bacteria 1350
75 Ga0466965_0000512 3300044683 Bacteria 13809
76 Ga0466966_0000876 3300044684 Bacteria 19208
77 Ga0466966_0016379 3300044684 Bacteria 4898
78 Ga0466966_0156458 3300044684 Bacteria 1388
79 Ga0466961_0003009 3300044693 Bacteria 10456
80 Ga0466961_0013555 3300044693 Bacteria 5220
81 Ga0466961_0034983 3300044693 Bacteria 3225
82 Ga0466963_0000687 3300044694 Bacteria 16444
83 Ga0466963_0001071 3300044694 Bacteria 14271
84 Ga0466963_0295751 3300044694 Bacteria 1138
85 Ga0466964_0071122 3300044706 Bacteria 1471
86 Ga0466971_0000608 3300044719 Bacteria 14248
87 Ga0466968_0008490 3300044735 Bacteria 3935
88 Ga0466970_0001221 3300044765 Bacteria 12431
89 Ga0466970_0004801 3300044765 Bacteria 6675
90 Ga0466957_0001387 3300044842 Bacteria 12637
91 Ga0466960_0003180 3300044901 Bacteria 6298
92 Ga0466959_0033483 3300045049 Bacteria 3799
93 Ga0466959_0173120 3300045049 Bacteria 1513
94 Ga0466958_0002375 3300045836 Bacteria 9414
95 Ga0466967_0009089 3300045976 Bacteria 7348
96 Ga0466967_0013005 3300045976 Bacteria 6403
97 Ga0466967_0076839 3300045976 Bacteria 3004
98 Ga0495627_026273 3300046453 Bacteria 1879
99 Ga0495592_0181448 3300046454 Bacteria 1433
100 Ga0495603_0001393 3300046455 Bacteria 14053
101 Ga0495603_0002461 3300046455 Bacteria 10892
102 Ga0495603_0003315 3300046455 Bacteria 9584
103 Ga0495603_0005373 3300046455 Bacteria 7638
104 Ga0495603_0010968 3300046455 Bacteria 5496
105 Ga0495629_0000848 3300046459 Bacteria 24687
106 Ga0495629_0008592 3300046459 Bacteria 7520
107 Ga0495629_0008832 3300046459 Bacteria 7408
108 Ga0495629_0064775 3300046459 Bacteria 2551
109 Ga0495629_0111468 3300046459 Bacteria 1907
110 Ga0495629_0253347 3300046459 Bacteria 1211
111 Ga0495651_0001723 3300046462 Bacteria 16877
112 Ga0495653_0112135 3300046463 Bacteria 1958
113 Ga0495582_0017417 3300046473 Bacteria 3932
114 Ga0495582_0094488 3300046473 Bacteria 1669
115 Ga0495605_0007820 3300046474 Bacteria 6056
116 Ga0495662_0020334 3300046476 Bacteria 3210
117 Ga0495662_0028165 3300046476 Bacteria 2712
118 Ga0495664_0002699 3300046477 Bacteria 9550
119 Ga0495585_0078887 3300046492 Bacteria 1786
120 Ga0495594_0000685 3300046499 Bacteria 17457
121 Ga0495594_0010015 3300046499 Bacteria 4909
122 Ga0495594_0021535 3300046499 Bacteria 3440
123 Ga0495596_0018758 3300046500 Bacteria 2850
124 Ga0495607_0022333 3300046501 Bacteria 3975
125 Ga0495606_0072573 3300046507 Bacteria 2162
126 Ga0495610_0036935 3300046512 Bacteria 2491
127 Ga0495618_0019619 3300046514 Bacteria 4161
128 Ga0495618_0087944 3300046514 Bacteria 1987
129 Ga0495620_0005316 3300046515 Bacteria 7203
130 Ga0495620_0018075 3300046515 Bacteria 3497
131 Ga0495628_0085217 3300046516 Bacteria 2451
132 Ga0495628_0264971 3300046516 Bacteria 1280
133 Ga0495630_0005594 3300046517 Bacteria 8875
134 Ga0495643_0071354 3300046522 Bacteria 1823
135 Ga0495644_0109188 3300046523 Bacteria 1049
136 Ga0495648_0094200 3300046524 Bacteria 1668
137 Ga0495648_0103507 3300046524 Bacteria 1565
138 Ga0495666_0045268 3300046526 Bacteria 2123
139 Ga0495666_0086000 3300046526 Bacteria 1485
140 Ga0495652_0014198 3300046529 Bacteria 7154
141 Ga0495652_0033676 3300046529 Bacteria 4470
142 Ga0495640_0021428 3300046533 Bacteria 4742
143 Ga0495640_0066986 3300046533 Bacteria 2420
144 Ga0495587_0003891 3300046536 Bacteria 9905
145 Ga0495609_0101863 3300046538 Bacteria 1244
146 Ga0495597_0018507 3300046542 Bacteria 3269
147 Ga0495597_0022831 3300046542 Bacteria 2898
148 Ga0495645_0030875 3300046543 Bacteria 3903
149 Ga0495645_0179183 3300046543 Bacteria 1453
150 Ga0495622_0008989 3300046557 Bacteria 4628
151 Ga0495667_0128178 3300046559 Bacteria 1637
152 Ga0495634_0005757 3300046642 Bacteria 9463
153 Ga0495611_0007355 3300046648 Bacteria 4675
154 Ga0495625_0013510 3300046660 Bacteria 6556
155 Ga0495625_0035883 3300046660 Bacteria 3649
156 Ga0495625_0073888 3300046660 Bacteria 2389
157 Ga0495635_0004814 3300046663 Bacteria 9386
158 Ga0495588_0000658 3300046674 Bacteria 15999
159 Ga0495657_0014156 3300046675 Bacteria 5860
160 Ga0495657_0029166 3300046675 Bacteria 3872
161 Ga0495657_0113754 3300046675 Bacteria 1711
162 Ga0495657_0313602 3300046675 Bacteria 933
163 Ga0495623_0196866 3300046679 Bacteria 1161
164 Ga0495646_0000882 3300046680 Bacteria 17025
165 Ga0495613_0002932 3300046689 Bacteria 12776
166 Ga0495613_0006880 3300046689 Bacteria 8486
167 Ga0495613_0030833 3300046689 Bacteria 3983
168 Ga0495613_0040557 3300046689 Bacteria 3449
169 Ga0495613_0160589 3300046689 Bacteria 1599
170 Ga0495671_0001574 3300046692 Bacteria 15105
171 Ga0495649_0040220 3300046694 Bacteria 2561
172 Ga0495649_0067122 3300046694 Bacteria 1924
173 Ga0495649_0090335 3300046694 Bacteria 1633
174 Ga0495589_0016785 3300046794 Bacteria 3760
175 Ga0495589_0038435 3300046794 Bacteria 2395
176 Ga0495589_0125035 3300046794 Bacteria 1237
177 Ga0495600_0011118 3300046809 Bacteria 5603
178 Ga0495581_0002928 3300047315 Bacteria 9761
179 Ga0495604_0003367 3300047317 Bacteria 12746
180 Ga0495604_0087678 3300047317 Bacteria 2317
181 Ga0495636_0002613 3300047318 Bacteria 6930
182 Ga0495636_0003062 3300047318 Bacteria 6485
183 Ga0495674_0030042 3300047319 Bacteria 4944
184 Ga0495672_0056680 3300047320 Bacteria 2278
185 Ga0495676_0004818 3300047321 Bacteria 12369
186 Ga0495676_0010189 3300047321 Bacteria 8536
187 Ga0495676_0114162 3300047321 Bacteria 1976
188 Ga0495680_0006200 3300047322 Bacteria 11145
189 Ga0495683_0064095 3300047323 Bacteria 1815
190 Ga0495683_0081277 3300047323 Bacteria 1580
191 Ga0495687_001373 3300047443 Bacteria 22509
192 Ga0495687_003246 3300047443 Bacteria 12000
193 Ga0495687_020642 3300047443 Bacteria 3207
194 Ga0495687_028092 3300047443 Bacteria 2621
195 Ga0495687_029156 3300047443 Bacteria 2558
196 Ga0495687_036604 3300047443 Bacteria 2194
197 Ga0495675_0002820 3300047444 Bacteria 10415
198 Ga0495675_0031888 3300047444 Bacteria 3365
199 Ga0495685_024420 3300047447 Bacteria 2080
200 Ga0495685_025044 3300047447 Bacteria 2053
201 Ga0495681_0000410 3300047470 Bacteria 33110
202 Ga0495681_0096848 3300047470 Bacteria 1295
203 Ga0495686_0009221 3300047472 Bacteria 7141
204 Ga0495593_0001603 3300047673 Bacteria 13363
205 Ga0495593_0072445 3300047673 Bacteria 1788
206 Ga0495593_0074559 3300047673 Bacteria 1759
207 Ga0495602_0064237 3300048088 Bacteria 3175
208 Ga0495614_0000918 3300048089 Bacteria 12564
209 Ga0495614_0001880 3300048089 Bacteria 9213
210 Ga0495614_0028142 3300048089 Bacteria 2422
211 Ga0495614_0050171 3300048089 Bacteria 1788
212 Ga0495614_0105568 3300048089 Bacteria 1234
213 Ga0495626_0016157 3300048091 Bacteria 3800
214 Ga0495626_0041059 3300048091 Bacteria 2182
215 Ga0496106_0107442 3300048909 Bacteria 2170
216 Ga0496108_0409375 3300048911 Bacteria 1185
217 Ga0495678_043748 3300049459 Bacteria 1776
218 Ga0495678_052955 3300049459 Bacteria 1560
219 Ga0501031_0049726 3300049568 Bacteria 2732
220 Ga0501033_0001038 3300049570 Bacteria 25291
221 Ga0501034_0011119 3300049571 Bacteria 9340
222 Ga0501034_0032796 3300049571 Bacteria 5273
223 Ga0501034_0220476 3300049571 Bacteria 1849
224 Ga0501036_0001728 3300049572 Bacteria 16975
225 Ga0501036_0033306 3300049572 Bacteria 4357
226 Ga0501036_0131261 3300049572 Bacteria 2115
227 Ga0501037_0011852 3300049573 Bacteria 6420
228 Ga0501037_0067622 3300049573 Bacteria 2601
229 Ga0501038_0020866 3300049574 Bacteria 5888
230 Ga0501038_0045768 3300049574 Bacteria 3797
231 Ga0501038_0064662 3300049574 Bacteria 3119
232 Ga0501038_0251110 3300049574 Bacteria 1401
233 Ga0501039_0008349 3300049575 Bacteria 7892
234 Ga0501039_0379023 3300049575 Bacteria 1111
235 Ga0501042_0131740 3300049578 Bacteria 1802
236 Ga0501042_0185318 3300049578 Bacteria 1501
237 Ga0501043_0006399 3300049579 Bacteria 9462
238 Ga0501043_0163201 3300049579 Bacteria 1740
239 Ga0501043_0304060 3300049579 Bacteria 1218
240 Ga0501046_0373072 3300049580 Bacteria 1033
241 Ga0501047_0000072 3300049581 Bacteria 126542
242 Ga0501047_0075191 3300049581 Bacteria 3251
243 Ga0501047_0116577 3300049581 Bacteria 2552
244 Ga0501047_0218255 3300049581 Bacteria 1763
245 Ga0501048_0038251 3300049582 Bacteria 3443
246 Ga0501048_0290890 3300049582 Bacteria 1162
247 Ga0501074_0002531 3300049590 Bacteria 12756
248 Ga0501080_0025990 3300049742 Bacteria 5440
249 Ga0501035_0014639 3300049822 Bacteria 7242
250 Ga0501035_0038860 3300049822 Bacteria 4308
251 Ga0501035_0290526 3300049822 Bacteria 1380
252 Ga0501044_0005864 3300049823 Bacteria 13606
253 Ga0501044_0041701 3300049823 Bacteria 4778
254 Ga0501044_0103840 3300049823 Bacteria 2856
255 Ga0501044_0114501 3300049823 Bacteria 2702
256 Ga0501044_0548095 3300049823 Bacteria 1054
257 Ga0501044_0598859 3300049823 Bacteria 995
258 nmdc:mga03n38_2421_c1 3300050490 Bacteria 5760
259 nmdc:mga06z11_629_c1 3300050494 Bacteria 12831
260 Ga0500644_0015792 3300053088 Bacteria 2162
261 Ga0500572_003007 3300053111 Bacteria 3935
262 Ga0500600_0082229 3300053149 Bacteria 1739
263 Ga0500624_003399 3300053157 Bacteria 2091
264 Ga0466962_0013134 3300061719 Bacteria 3985
265 Ga0466962_0015548 3300061719 Bacteria 3670
266 Ga0466962_0023951 3300061719 Bacteria 2934
267 2547408196 2547132111 Bacteria 8013147
268 2554257750 2554235005 Bacteria 6457341
269 2585299233 2582581312 Bacteria 7308206
270 2585308887 2582581313 Bacteria 10042643
271 2585313575 2582581314 Bacteria 11452267
272 2616694992 2616644814 Bacteria 11555299
273 2616904561 2616644941 Bacteria 8510691
274 2643765040 2643221548 Bacteria 8053412
275 2643899113 2643221578 Bacteria 9213798
276 2643942366 2643221587 Bacteria 7586415
277 2644262378 2643221647 Bacteria 10741251
278 2644389996 2643221670 Bacteria 6497041
279 2644403296 2643221673 Bacteria 9196637
280 2644429446 2643221677 Bacteria 7584031
281 2644437232 2643221678 Bacteria 9540101
282 2644461121 2643221682 Bacteria 6743283
283 2784588657 2784132148 Bacteria 8627943
284 2785343196 2784746763 Bacteria 9783172
285 2785369599 2784746768 Bacteria 10036182
286 2786670689 2786546132 Bacteria 10419719
287 2793976177 2791355406 Bacteria 11364898
288 2804846892 2802429296 Bacteria 7227771
289 2808842132 2808606359 Bacteria 9866990
290 2808920655 2808606375 Bacteria 9466072
291 2809232267 2808606448 Bacteria 8656184
292 2811849139 2808606982 Bacteria 7791042
293 2812357998 2811994879 Bacteria 9313447
294 2812480442 2811994917 Bacteria 7761064
295 2819695494 2818991463 Bacteria 7948711
296 2852636566 2852635781 Bacteria 8251373
297 2862179387 2862178590 Bacteria 8583590
298 2862285745 2862281513 Bacteria 9621493
299 2862294803 2862290372 Bacteria 7471434
300 2862511722 2862507626 Bacteria 9425308
301 2862579168 2862574272 Bacteria 10567477
302 2863404507 2863404153 Bacteria 9672205
303 2867371768 2867369537 Bacteria 6501581
304 2867431770 2867428634 Bacteria 9590268
305 2873155644 2873151551 Bacteria 8625867
306 2875395628 2875391855 Bacteria 7600475
307 2877681028 2877676314 Bacteria 9512378
308 2912719856 2912715099 Bacteria 9460473
309 2912724274 2912723979 Bacteria 8557534
310 2912760872 2912757875 Bacteria 7940295
311 2918505497 2918501144 Bacteria 8668083
312 2919469441 2919468124 Bacteria 9133025
313 2946049922 2946045630 Bacteria 8527308
314 2946067845 2946064051 Bacteria 8957905
315 2947229150 2947224130 Bacteria 9938529
316 2954386137 2954380949 Bacteria 10050426
317 2954677013 2954673503 Bacteria 9685905
318 2954687144 2954682443 Bacteria 9862841
319 2954696775 2954691527 Bacteria 10720516
320 2954705363 2954701450 Bacteria 10834262
321 2954716154 2954711539 Bacteria 10867210
322 2954726097 2954721474 Bacteria 10456478
323 2954735713 2954731030 Bacteria 10243860
324 2954745023 2954740390 Bacteria 10229294
325 2954754569 2954749733 Bacteria 10366972
326 2954763995 2954759201 Bacteria 9358192
327 2966601733 2966598605 Bacteria 7676064
328 2990063179 2990059506 Bacteria 9321252
329 2990091356 2990088156 Bacteria 6657676
330 3006500838 3006493962 Bacteria 8825450
331 8008567190 8008558824 Bacteria 10610750
332 8008578810 8008574985 Bacteria 7815457
333 8023629824 8023623736 Bacteria 8593882
334 8025417838 8025413630 Bacteria 7014048
335 8025537930 8025530807 Bacteria 8495698
336 8047898033 8047893842 Bacteria 11723082
337 8048137310 8048127548 Bacteria 11053136
338 8048360860 8048356638 Bacteria 11044339
339 8048374996 8048369669 Bacteria 11666822
340 8048383210 8048379754 Bacteria 11877923
341 8048412656 8048406513 Bacteria 8936924
342 8056449048 8056447290 Bacteria 7680491
343 8056671201 8056667051 Bacteria 6953971
344 8056833538 8056829672 Bacteria 9045328
345 Ga0495624_0035317
346 rootH1_10001920
347 rootH2_10020257
348 rootL2_10010247
349 rootH1_10002153
350 rootH1_10002154
351 rootH1_10081499
352 JGI25160J50197_1032293
353 Ga0006562J51391_1064650
354 Ga0068856_100117050
355 Ga0075365_10180171
356 Ga0075367_10000717
357 Ga0105246_10004452
358 Ga0157369_10151209
359 Ga0157372_10339022
360 Ga0182008_10001280
361 Ga0182007_10000582
362 Ga0183367_1005
363 Ga0207426_1012343
364 Ga0207647_10043908
365 Ga0207694_10123173
366 Ga0209371_1023573
367 Ga0209371_1025186
368 Ga0209813_10003671
369 Ga0307517_10003190
370 Ga0307515_10005593
371 Ga0307515_10048336
372 Ga0268256_1016330
373 Ga0268256_1026723
374 Ga0307511_10000262
375 Ga0307511_10057190
376 Ga0307512_10004180
377 Ga0307513_10026938
378 Ga0307513_10057612
379 Ga0307509_10012491
380 Ga0307509_10108624
381 Ga0307508_10002945
382 Ga0307508_10008636
383 Ga0307508_10043432
384 Ga0307508_10077542
385 Ga0307514_10019107
386 Ga0307514_10030622
387 Ga0307514_10093531
388 Ga0307516_10005149
389 Ga0307516_10290999
390 Ga0307518_10018325
391 Ga0307507_10029078
392 Ga0307507_10143593
393 Ga0307510_10005436
394 Ga0307510_10024338
395 Ga0307510_10039588
396 Ga0307510_10104737
397 Ga0395898_0006424
398 Ga0395898_0037413
399 Ga0439436_0000208
400 Ga0439436_0000491
401 Ga0439433_0000446
402 Ga0439449_0019712
403 Ga0439457_002018
404 Ga0439457_002219
405 Ga0450894_000035
406 Ga0450898_000275
407 Ga0450899_001489
408 Ga0450900_004041
409 Ga0450903_000067
410 Ga0450906_001001
411 Ga0439458_0000619
412 Ga0466969_0011005
413 Ga0466972_0004010
414 Ga0466972_0004844
415 Ga0466972_0005754
416 Ga0466972_0103007
417 Ga0466965_0000512
418 Ga0466966_0000876
419 Ga0466966_0016379
420 Ga0466966_0156458
421 Ga0466961_0003009
422 Ga0466961_0013555
423 Ga0466961_0034983
424 Ga0466963_0000687
425 Ga0466963_0001071
426 Ga0466963_0295751
427 Ga0466964_0071122
428 Ga0466971_0000608
429 Ga0466968_0008490
430 Ga0466970_0001221
431 Ga0466970_0004801
432 Ga0466957_0001387
433 Ga0466960_0003180
434 Ga0466959_0033483
435 Ga0466959_0173120
436 Ga0466958_0002375
437 Ga0466967_0009089
438 Ga0466967_0013005
439 Ga0466967_0076839
440 Ga0495627_026273
441 Ga0495592_0181448
442 Ga0495603_0001393
443 Ga0495603_0002461
444 Ga0495603_0003315
445 Ga0495603_0005373
446 Ga0495603_0010968
447 Ga0495629_0000848
448 Ga0495629_0008592
449 Ga0495629_0008832
450 Ga0495629_0064775
451 Ga0495629_0111468
452 Ga0495629_0253347
453 Ga0495651_0001723
454 Ga0495653_0112135
455 Ga0495582_0017417
456 Ga0495582_0094488
457 Ga0495605_0007820
458 Ga0495662_0020334
459 Ga0495662_0028165
460 Ga0495664_0002699
461 Ga0495585_0078887
462 Ga0495594_0000685
463 Ga0495594_0010015
464 Ga0495594_0021535
465 Ga0495596_0018758
466 Ga0495607_0022333
467 Ga0495606_0072573
468 Ga0495610_0036935
469 Ga0495618_0019619
470 Ga0495618_0087944
471 Ga0495620_0005316
472 Ga0495620_0018075
473 Ga0495628_0085217
474 Ga0495628_0264971
475 Ga0495630_0005594
476 Ga0495643_0071354
477 Ga0495644_0109188
478 Ga0495648_0094200
479 Ga0495648_0103507
480 Ga0495666_0045268
481 Ga0495666_0086000
482 Ga0495652_0014198
483 Ga0495652_0033676
484 Ga0495640_0021428
485 Ga0495640_0066986
486 Ga0495587_0003891
487 Ga0495609_0101863
488 Ga0495597_0018507
489 Ga0495597_0022831
490 Ga0495645_0030875
491 Ga0495645_0179183
492 Ga0495622_0008989
493 Ga0495667_0128178
494 Ga0495634_0005757
495 Ga0495611_0007355
496 Ga0495625_0013510
497 Ga0495625_0035883
498 Ga0495625_0073888
499 Ga0495635_0004814
500 Ga0495588_0000658
501 Ga0495657_0014156
502 Ga0495657_0029166
503 Ga0495657_0113754
504 Ga0495657_0313602
505 Ga0495623_0196866
506 Ga0495646_0000882
507 Ga0495613_0002932
508 Ga0495613_0006880
509 Ga0495613_0030833
510 Ga0495613_0040557
511 Ga0495613_0160589
512 Ga0495671_0001574
513 Ga0495649_0040220
514 Ga0495649_0067122
515 Ga0495649_0090335
516 Ga0495589_0016785
517 Ga0495589_0038435
518 Ga0495589_0125035
519 Ga0495600_0011118
520 Ga0495581_0002928
521 Ga0495604_0003367
522 Ga0495604_0087678
523 Ga0495636_0002613
524 Ga0495636_0003062
525 Ga0495674_0030042
526 Ga0495672_0056680
527 Ga0495676_0004818
528 Ga0495676_0010189
529 Ga0495676_0114162
530 Ga0495680_0006200
531 Ga0495683_0064095
532 Ga0495683_0081277
533 Ga0495687_001373
534 Ga0495687_003246
535 Ga0495687_020642
536 Ga0495687_028092
537 Ga0495687_029156
538 Ga0495687_036604
539 Ga0495675_0002820
540 Ga0495675_0031888
541 Ga0495685_024420
542 Ga0495685_025044
543 Ga0495681_0000410
544 Ga0495681_0096848
545 Ga0495686_0009221
546 Ga0495593_0001603
547 Ga0495593_0072445
548 Ga0495593_0074559
549 Ga0495602_0064237
550 Ga0495614_0000918
551 Ga0495614_0001880
552 Ga0495614_0028142
553 Ga0495614_0050171
554 Ga0495614_0105568
555 Ga0495626_0016157
556 Ga0495626_0041059
557 Ga0496106_0107442
558 Ga0496108_0409375
559 Ga0495678_043748
560 Ga0495678_052955
561 Ga0501031_0049726
562 Ga0501033_0001038
563 Ga0501034_0011119
564 Ga0501034_0032796
565 Ga0501034_0220476
566 Ga0501036_0001728
567 Ga0501036_0033306
568 Ga0501036_0131261
569 Ga0501037_0011852
570 Ga0501037_0067622
571 Ga0501038_0020866
572 Ga0501038_0045768
573 Ga0501038_0064662
574 Ga0501038_0251110
575 Ga0501039_0008349
576 Ga0501039_0379023
577 Ga0501042_0131740
578 Ga0501042_0185318
579 Ga0501043_0006399
580 Ga0501043_0163201
581 Ga0501043_0304060
582 Ga0501046_0373072
583 Ga0501047_0000072
584 Ga0501047_0075191
585 Ga0501047_0116577
586 Ga0501047_0218255
587 Ga0501048_0038251
588 Ga0501048_0290890
589 Ga0501074_0002531
590 Ga0501080_0025990
591 Ga0501035_0014639
592 Ga0501035_0038860
593 Ga0501035_0290526
594 Ga0501044_0005864
595 Ga0501044_0041701
596 Ga0501044_0103840
597 Ga0501044_0114501
598 Ga0501044_0548095
599 Ga0501044_0598859
600 nmdc:mga03n38_2421_c1
601 nmdc:mga06z11_629_c1
602 Ga0500644_0015792
603 Ga0500572_003007
604 Ga0500600_0082229
605 Ga0500624_003399
606 Ga0466962_0013134
607 Ga0466962_0015548
608 Ga0466962_0023951
609 2547408196
610 2554257750
611 2585299233
612 2585308887
613 2585313575
614 2616694992
615 2616904561
616 2643765040
617 2643899113
618 2643942366
619 2644262378
620 2644389996
621 2644403296
622 2644429446
623 2644437232
624 2644461121
625 2784588657
626 2785343196
627 2785369599
628 2786670689
629 2793976177
630 2804846892
631 2808842132
632 2808920655
633 2809232267
634 2811849139
635 2812357998
636 2812480442
637 2819695494
638 2852636566
639 2862179387
640 2862285745
641 2862294803
642 2862511722
643 2862579168
644 2863404507
645 2867371768
646 2867431770
647 2873155644
648 2875395628
649 2877681028
650 2912719856
651 2912724274
652 2912760872
653 2918505497
654 2919469441
655 2946049922
656 2946067845
657 2947229150
658 2954386137
659 2954677013
660 2954687144
661 2954696775
662 2954705363
663 2954716154
664 2954726097
665 2954735713
666 2954745023
667 2954754569
668 2954763995
669 2966601733
670 2990063179
671 2990091356
672 3006500838
673 8008567190
674 8008578810
675 8023629824
676 8025417838
677 8025537930
678 8047898033
679 8048137310
680 8048360860
681 8048374996
682 8048383210
683 8048412656
684 8056449048
685 8056671201
686 8056833538

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

28

313

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3uqe-assembly1.cif.gz_A-2 crystal structure of the phosphofructokinase-2 mutant y23d from escherichia coli 0.9262 2 297
3q1y-assembly1.cif.gz_A-2 allosteric regulation by lysine residue: a novel anion-hole formation in the ribokinase family 0.9238 2 301
2awd-assembly1.cif.gz_B crystal structure of lacc from enterococcus faecalis 0.9184 2 304
3umo-assembly1.cif.gz_A crystal structure of the phosphofructokinase-2 from escherichia coli in complex with potassium 0.9176 2 297
3ie7-assembly1.cif.gz_A-2 the crystal structure of phosphofructokinase (lin2199) from listeria innocua in complex with atp at 1.6a 0.9167 2 301
ID Description Score Start End Superfamily
af_P9WID3_12_317_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9505 2 299 3.40.1190.20
af_P0AEW9_2_310_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9254 2 301 3.40.1190.20
af_P9WID3_12_317_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9233 2 299 3.40.1190.20
af_E9AHA4_4_315_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9204 2 301 3.40.1190.20
3umoB00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9131 2 297 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A6G3QXI4-F1-model_v4 1-phosphofructokinase family hexose kinase 0.9918 1 227 GO:0005524
GO:0005829
GO:0008443
AF-A0A6I5GDB0-F1-model_v4 1-phosphofructokinase 0.9898 85 261 GO:0005524
GO:0005829
GO:0008443
AF-A0A6B3GBT4-F1-model_v4 1-phosphofructokinase 0.9883 1 141 GO:0005524
GO:0005829
GO:0008443
AF-A0A2V2Q0T5-F1-model_v4 1-phosphofructokinase 0.9881 1 175 GO:0005524
GO:0005829
GO:0008443
AF-A0A6G3QXI4-F1-model_v4 1-phosphofructokinase family hexose kinase 0.9875 1 227 GO:0005524
GO:0005829
GO:0008443

Map