F414787

General Info

Members Datasets Scaffolds Average Seq Length
341 170 337 496

Family's Representative Sequence

Representative Sequence 3300031247|Ga0265340_10013804|Ga0265340_100138043
Length 596
Sequence MAGVGQRLEIRQGQSLVMTPQLQQAIKLLQLSNLELAEYCEQELERNPLLERDDESTPGERADEALSREDFSKASDLDQAAHENMYDGGEAPAPARVAEAPQGSLTDWTKVGSGNAFEGEDGIESSVAAATSLKDHLESQLSIAALLPEDRMILLALIDAVDETGYLRADPMDIAHRLGCEREDVEAVLGVLHGFDPVGVGARDLAECLSLQLKALDRLDPAMQALLTRLDLVARRDMSQLCALCGVDAEDIADMISEIRQLNPKPGLAFGAEPVTPVVPDVFVKEGPDGNWQIELNSETLPRLLVNNQYYGTVSRTARDKESKNYLADCLNNANWLVKSLDQRARTILKVASEIVRHQDAFLTHGVRHLRPLNLRIIAEAISMHESTVSRVTSNKYIATPRGLFELKYFFTASIQSVNGTESHSAEAVRDRIREMIENEEPREILSDDRIVALLTADGVNIARRTVAKYREALRIPSSVEPRRFWARAPGSGQKLSVNVTPFFIGIFDEHCRPARARCRFAGPQGAVQKAVAPGTRGPRPWPDAPVRASHFRNLGGTGTVGNHRRGGRDRHSPWSHDRSQDHHRYFHATRTRHRL

Samples

Sample ID Description Type Environment
1 2643221580 Devosia sp. Root635 Isolate Unclassified
2 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
3 2643221674 Devosia sp. Root436 Isolate Unclassified
4 2932401849 Devosia sp. 2618 Isolate Rhizosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
98 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
99 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
100 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
101 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
102 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
103 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
104 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
105 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
111 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
112 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
113 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
114 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
126 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
127 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
128 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
158 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
159 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
160 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
161 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
162 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
163 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
164 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
165 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
166 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
167 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
168 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.83
Metatranscriptomes 0
Isolates 1.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.04
Nodule 0
Rhizoplane 0
Rhizosphere 90.03
Stem 0
Stem Tuber 0
Unclassified 2.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000013 3300003214 Bacteria 402100
2 JGI25165J46597_1004596 3300003214 Bacteria 2909
3 JGI25153J46596_10001136 3300003215 Bacteria 16098
4 Ga0070658_10002358 3300005327 Bacteria 15835
5 Ga0070658_10126770 3300005327 Bacteria 2125
6 Ga0070666_10000260 3300005335 Bacteria 34878
7 Ga0070666_10046348 3300005335 Bacteria 2916
8 Ga0070666_10092003 3300005335 Bacteria 2084
9 Ga0070680_100002795 3300005336 Bacteria 12963
10 Ga0070660_100006376 3300005339 Bacteria 8178
11 Ga0070660_100017959 3300005339 Bacteria 5161
12 Ga0070660_100019262 3300005339 Bacteria 4997
13 Ga0070691_10002989 3300005341 Bacteria 7568
14 Ga0070691_10004788 3300005341 Bacteria 6161
15 Ga0070661_100000041 3300005344 Bacteria 99916
16 Ga0070668_100005741 3300005347 Bacteria 9204
17 Ga0070675_100117716 3300005354 Bacteria 2255
18 Ga0070673_100024692 3300005364 Bacteria 4411
19 Ga0070659_100024396 3300005366 Bacteria 4636
20 Ga0070667_100011475 3300005367 Bacteria 7327
21 Ga0070709_10004594 3300005434 Bacteria 7456
22 Ga0070714_100056442 3300005435 Bacteria 3359
23 Ga0070713_100000003 3300005436 Bacteria 245840
24 Ga0070713_100177125 3300005436 Bacteria 1914
25 Ga0070701_10036458 3300005438 Bacteria 2478
26 Ga0070711_100041192 3300005439 Bacteria 3118
27 Ga0070681_10000001 3300005458 Bacteria 946857
28 Ga0068867_100086054 3300005459 Bacteria 2377
29 Ga0070679_100004699 3300005530 Bacteria 12598
30 Ga0070679_100038666 3300005530 Bacteria 4743
31 Ga0070679_100040539 3300005530 Bacteria 4633
32 Ga0070679_100089430 3300005530 Bacteria 3066
33 Ga0068853_100001311 3300005539 Bacteria 17870
34 Ga0068853_100023383 3300005539 Bacteria 5173
35 Ga0068853_100031790 3300005539 Bacteria 4466
36 Ga0070695_100005828 3300005545 Bacteria 7265
37 Ga0070665_100004633 3300005548 Bacteria 14374
38 Ga0070665_100051690 3300005548 Bacteria 4121
39 Ga0068855_100000142 3300005563 Bacteria 92185
40 Ga0068855_100006915 3300005563 Bacteria 13759
41 Ga0068855_100010825 3300005563 Bacteria 11014
42 Ga0068855_100036170 3300005563 Bacteria 5879
43 Ga0068855_100144670 3300005563 Bacteria 2708
44 Ga0068857_100000050 3300005577 Bacteria 65116
45 Ga0068856_100014680 3300005614 Bacteria 7560
46 Ga0068856_100202218 3300005614 Bacteria 2001
47 Ga0068852_100006261 3300005616 Bacteria 8587
48 Ga0068852_100163441 3300005616 Bacteria 2080
49 Ga0068858_100021564 3300005842 Bacteria 6021
50 Ga0068858_100088711 3300005842 Bacteria 2877
51 Ga0070712_100000326 3300006175 Bacteria 26980
52 Ga0070712_100005593 3300006175 Bacteria 7776
53 Ga0075362_10001153 3300006177 Bacteria 8255
54 Ga0075362_10033851 3300006177 Bacteria 2224
55 Ga0097621_100008147 3300006237 Bacteria 7536
56 Ga0068871_100000015 3300006358 Bacteria 97550
57 Ga0075436_100000038 3300006914 Bacteria 82918
58 Ga0075435_100094469 3300007076 Bacteria 2472
59 Ga0105240_10004248 3300009093 Bacteria 21898
60 Ga0105240_10005507 3300009093 Bacteria 18867
61 Ga0105240_10013229 3300009093 Bacteria 11350
62 Ga0105240_10030765 3300009093 Bacteria 6973
63 Ga0105240_10032682 3300009093 Bacteria 6733
64 Ga0105240_10060100 3300009093 Bacteria 4739
65 Ga0105243_10001896 3300009148 Bacteria 17836
66 Ga0105241_10008292 3300009174 Bacteria 7648
67 Ga0105241_10022992 3300009174 Bacteria 4622
68 Ga0105241_10025651 3300009174 Bacteria 4381
69 Ga0105242_10006696 3300009176 Bacteria 8890
70 Ga0105248_10000013 3300009177 Bacteria 328864
71 Ga0105248_10031574 3300009177 Bacteria 5919
72 Ga0105237_10000053 3300009545 Bacteria 158890
73 Ga0105237_10003068 3300009545 Bacteria 20136
74 Ga0105237_10020905 3300009545 Bacteria 6737
75 Ga0105237_10024275 3300009545 Bacteria 6204
76 Ga0105237_10067252 3300009545 Bacteria 3577
77 Ga0105238_10003928 3300009551 Bacteria 14750
78 Ga0105238_10017441 3300009551 Bacteria 7296
79 Ga0105238_10032188 3300009551 Bacteria 5336
80 Ga0105238_10268894 3300009551 Bacteria 1685
81 Ga0105249_10112698 3300009553 Bacteria 2573
82 Ga0105239_10001462 3300010375 Bacteria 31410
83 Ga0105239_10003590 3300010375 Bacteria 18946
84 Ga0105239_10022302 3300010375 Bacteria 6980
85 Ga0105246_10028377 3300011119 Bacteria 3676
86 Ga0157373_10001769 3300013100 Bacteria 16440
87 Ga0157371_10018927 3300013102 Bacteria 5084
88 Ga0157370_10028545 3300013104 Bacteria 5487
89 Ga0157370_10123801 3300013104 Bacteria 2414
90 Ga0157369_10003941 3300013105 Bacteria 17611
91 Ga0157369_10126296 3300013105 Bacteria 2711
92 Ga0157378_10026791 3300013297 Bacteria 5083
93 Ga0157372_10034494 3300013307 Bacteria 5563
94 Ga0163163_10001131 3300014325 Bacteria 22661
95 Ga0163163_10190767 3300014325 Bacteria 2098
96 Ga0157379_10001517 3300014968 Bacteria 19118
97 Ga0157379_10003202 3300014968 Bacteria 13869
98 Ga0157379_10066469 3300014968 Bacteria 3223
99 Ga0157379_10137606 3300014968 Bacteria 2201
100 Ga0157379_10223274 3300014968 Bacteria 1707
101 Ga0207427_102970 3300025231 Bacteria 3958
102 Ga0209233_1000013 3300025261 Bacteria 1013785
103 Ga0209233_1002175 3300025261 Bacteria 7347
104 Ga0209233_1006417 3300025261 Bacteria 3793
105 Ga0209758_1000036 3300025297 Bacteria 441671
106 Ga0207680_10015387 3300025903 Bacteria 3991
107 Ga0207699_10002435 3300025906 Bacteria 8784
108 Ga0207705_10000390 3300025909 Bacteria 38824
109 Ga0207654_10002392 3300025911 Bacteria 9589
110 Ga0207707_10000001 3300025912 Bacteria 1212482
111 Ga0207707_10004041 3300025912 Bacteria 13006
112 Ga0207695_10000003 3300025913 Bacteria 1368691
113 Ga0207695_10026008 3300025913 Bacteria 6539
114 Ga0207695_10026386 3300025913 Bacteria 6484
115 Ga0207695_10063607 3300025913 Bacteria 3803
116 Ga0207671_10000555 3300025914 Bacteria 50279
117 Ga0207671_10005690 3300025914 Bacteria 11395
118 Ga0207671_10009600 3300025914 Bacteria 8066
119 Ga0207693_10000369 3300025915 Bacteria 41242
120 Ga0207660_10001013 3300025917 Bacteria 18630
121 Ga0207660_10001356 3300025917 Bacteria 16424
122 Ga0207657_10002224 3300025919 Bacteria 21049
123 Ga0207657_10006944 3300025919 Bacteria 11665
124 Ga0207657_10024876 3300025919 Bacteria 5535
125 Ga0207649_10000437 3300025920 Bacteria 30058
126 Ga0207652_10000353 3300025921 Bacteria 47513
127 Ga0207652_10002876 3300025921 Bacteria 14402
128 Ga0207652_10037380 3300025921 Bacteria 4110
129 Ga0207652_10067683 3300025921 Bacteria 3097
130 Ga0207652_10070158 3300025921 Bacteria 3043
131 Ga0207694_10000125 3300025924 Bacteria 81711
132 Ga0207694_10008634 3300025924 Bacteria 7692
133 Ga0207694_10046300 3300025924 Bacteria 3362
134 Ga0207659_10033150 3300025926 Bacteria 3552
135 Ga0207700_10000083 3300025928 Bacteria 58710
136 Ga0207700_10072877 3300025928 Bacteria 2650
137 Ga0207700_10125898 3300025928 Bacteria 2085
138 Ga0207664_10004717 3300025929 Bacteria 9253
139 Ga0207664_10047589 3300025929 Bacteria 3370
140 Ga0207690_10030959 3300025932 Bacteria 3419
141 Ga0207686_10003116 3300025934 Bacteria 8924
142 Ga0207709_10010796 3300025935 Bacteria 5029
143 Ga0207711_10000003 3300025941 Bacteria 1042791
144 Ga0207711_10010769 3300025941 Bacteria 7604
145 Ga0207667_10000092 3300025949 Bacteria 148077
146 Ga0207667_10040539 3300025949 Bacteria 4958
147 Ga0207667_10041081 3300025949 Bacteria 4920
148 Ga0207651_10041030 3300025960 Bacteria 3068
149 Ga0207712_10041984 3300025961 Bacteria 3147
150 Ga0207668_10012019 3300025972 Bacteria 5284
151 Ga0207640_10020196 3300025981 Bacteria 3952
152 Ga0207658_10009084 3300025986 Bacteria 6741
153 Ga0207658_10026260 3300025986 Bacteria 4082
154 Ga0207703_10019358 3300026035 Bacteria 5318
155 Ga0207703_10040995 3300026035 Bacteria 3708
156 Ga0207639_10032673 3300026041 Bacteria 3833
157 Ga0207639_10050903 3300026041 Bacteria 3148
158 Ga0207639_10053858 3300026041 Bacteria 3072
159 Ga0207639_10062760 3300026041 Bacteria 2875
160 Ga0207639_10070828 3300026041 Bacteria 2725
161 Ga0207639_10141534 3300026041 Bacteria 2005
162 Ga0207702_10000045 3300026078 Bacteria 144714
163 Ga0207702_10024763 3300026078 Bacteria 4979
164 Ga0207641_10099980 3300026088 Bacteria 2553
165 Ga0207648_10010010 3300026089 Bacteria 9020
166 Ga0207674_10000026 3300026116 Bacteria 151359
167 Ga0207674_10053735 3300026116 Bacteria 4104
168 Ga0207674_10178871 3300026116 Bacteria 2073
169 Ga0207683_10068142 3300026121 Bacteria 3141
170 Ga0207698_10005517 3300026142 Bacteria 7826
171 Ga0268266_10000708 3300028379 Bacteria 45085
172 Ga0268266_10002956 3300028379 Bacteria 17530
173 Ga0268266_10011691 3300028379 Bacteria 7616
174 Ga0268264_10087783 3300028381 Bacteria 2675
175 Ga0265337_1004798 3300028556 Bacteria 5535
176 Ga0265334_10001637 3300028573 Bacteria 10747
177 Ga0265318_10000447 3300028577 Bacteria 31118
178 Ga0265318_10006027 3300028577 Bacteria 5624
179 Ga0265338_10000017 3300028800 Bacteria 344481
180 Ga0265338_10004338 3300028800 Bacteria 19224
181 Ga0265338_10006800 3300028800 Bacteria 14410
182 Ga0265338_10010768 3300028800 Bacteria 10666
183 Ga0265338_10021711 3300028800 Bacteria 6679
184 Ga0265338_10108694 3300028800 Bacteria 2239
185 Ga0265332_10023861 3300031238 Bacteria 2695
186 Ga0265320_10000217 3300031240 Bacteria 46656
187 Ga0265325_10000008 3300031241 Bacteria 186174
188 Ga0265325_10000092 3300031241 Bacteria 63555
189 Ga0265325_10002516 3300031241 Bacteria 12332
190 Ga0265325_10015859 3300031241 Bacteria 4226
191 Ga0265325_10023108 3300031241 Bacteria 3400
192 Ga0265340_10000276 3300031247 Bacteria 26836
193 Ga0265340_10003116 3300031247 Bacteria 9401
194 Ga0265340_10013804 3300031247 Bacteria 4234
195 Ga0265340_10019805 3300031247 Bacteria 3463
196 Ga0265339_10001046 3300031249 Bacteria 21077
197 Ga0265339_10009111 3300031249 Bacteria 6270
198 Ga0265339_10010871 3300031249 Bacteria 5628
199 Ga0265339_10028131 3300031249 Bacteria 3200
200 Ga0265331_10000020 3300031250 Bacteria 258149
201 Ga0265331_10008709 3300031250 Bacteria 5750
202 Ga0265331_10009066 3300031250 Bacteria 5619
203 Ga0265327_10000869 3300031251 Bacteria 44810
204 Ga0265327_10006845 3300031251 Bacteria 8984
205 Ga0265316_10022422 3300031344 Bacteria 5324
206 Ga0265316_10027957 3300031344 Bacteria 4659
207 Ga0265316_10065445 3300031344 Bacteria 2815
208 Ga0265316_10078569 3300031344 Bacteria 2533
209 Ga0307408_100177104 3300031548 Bacteria 1707
210 Ga0265313_10002285 3300031595 Bacteria 16811
211 Ga0265313_10003214 3300031595 Bacteria 13432
212 Ga0265313_10004608 3300031595 Bacteria 10465
213 Ga0265313_10024185 3300031595 Bacteria 3251
214 Ga0265314_10000188 3300031711 Bacteria 92043
215 Ga0265314_10001476 3300031711 Bacteria 26149
216 Ga0265314_10026953 3300031711 Bacteria 4310
217 Ga0265314_10045919 3300031711 Bacteria 3085
218 Ga0265342_10002290 3300031712 Bacteria 16669
219 Ga0265342_10011774 3300031712 Bacteria 5963
220 Ga0265342_10015478 3300031712 Bacteria 5014
221 Ga0307516_10021177 3300031730 Bacteria 6700
222 Ga0307516_10057415 3300031730 Bacteria 3792
223 Ga0307413_10028910 3300031824 Bacteria 3094
224 Ga0307414_10023268 3300032004 Bacteria 3927
225 Ga0307414_10029900 3300032004 Bacteria 3552
226 Ga0373932_0009946 3300035112 Bacteria 2295
227 Ga0373955_0004019 3300035172 Bacteria 6491
228 Ga0373931_0058601 3300035691 Bacteria 2069
229 Ga0373927_0029913 3300035695 Bacteria 3553
230 Ga0373937_0002752 3300036401 Bacteria 14665
231 Ga0373925_0051076 3300037068 Bacteria 3085
232 Ga0373925_0079211 3300037068 Bacteria 2496
233 Ga0395900_0219999 3300037418 Bacteria 1914
234 Ga0395898_0057155 3300037466 Bacteria 3802
235 Ga0436365_0238484 3300039437 Bacteria 4402
236 Ga0436365_1650855 3300039437 Bacteria 128546
237 Ga0495654_0048037 3300046530 Bacteria 2096
238 Ga0495609_0009095 3300046538 Bacteria 4823
239 Ga0495645_0038411 3300046543 Bacteria 3492
240 Ga0495622_0001953 3300046557 Bacteria 10115
241 Ga0495611_0034104 3300046648 Bacteria 2249
242 Ga0495623_0045574 3300046679 Bacteria 2785
243 Ga0496121_0005260 3300048924 Bacteria 16719
244 Ga0496126_0004966 3300048929 Bacteria 15516
245 Ga0496126_0010949 3300048929 Bacteria 9447
246 Ga0495682_0002045 3300049460 Bacteria 9895
247 Ga0501032_0005328 3300049569 Bacteria 9569
248 Ga0501033_0006428 3300049570 Bacteria 9201
249 Ga0501033_0012191 3300049570 Bacteria 6561
250 Ga0501033_0029285 3300049570 Bacteria 4138
251 Ga0501033_0037436 3300049570 Bacteria 3632
252 Ga0501033_0053181 3300049570 Bacteria 2999
253 Ga0501034_0009428 3300049571 Bacteria 10218
254 Ga0501034_0014496 3300049571 Bacteria 8117
255 Ga0501034_0035764 3300049571 Bacteria 5034
256 Ga0501036_0007778 3300049572 Bacteria 8765
257 Ga0501036_0033444 3300049572 Bacteria 4349
258 Ga0501037_0060519 3300049573 Bacteria 2762
259 Ga0501038_0002891 3300049574 Bacteria 16020
260 Ga0501038_0038455 3300049574 Bacteria 4190
261 Ga0501038_0071105 3300049574 Bacteria 2952
262 Ga0501038_0090764 3300049574 Bacteria 2560
263 Ga0501039_0005124 3300049575 Bacteria 9928
264 Ga0501039_0046275 3300049575 Bacteria 3361
265 Ga0501043_0010886 3300049579 Bacteria 7122
266 Ga0501043_0022476 3300049579 Bacteria 4944
267 Ga0501043_0056505 3300049579 Bacteria 3083
268 Ga0501046_0000911 3300049580 Bacteria 28909
269 Ga0501046_0015421 3300049580 Bacteria 6420
270 Ga0501046_0049813 3300049580 Bacteria 3312
271 Ga0501047_0006888 3300049581 Bacteria 10680
272 Ga0501047_0011126 3300049581 Bacteria 8517
273 Ga0501047_0012279 3300049581 Bacteria 8107
274 Ga0501047_0012552 3300049581 Bacteria 8023
275 Ga0501047_0017251 3300049581 Bacteria 6912
276 Ga0501047_0020364 3300049581 Bacteria 6370
277 Ga0501047_0030147 3300049581 Bacteria 5230
278 Ga0501047_0082882 3300049581 Bacteria 3082
279 Ga0501048_0156747 3300049582 Bacteria 1611
280 Ga0501067_0000500 3300049583 Bacteria 21522
281 Ga0501070_0000015 3300049586 Bacteria 179449
282 Ga0501070_0003152 3300049586 Bacteria 14359
283 Ga0501070_0004344 3300049586 Bacteria 12187
284 Ga0501072_0003562 3300049588 Bacteria 11718
285 Ga0501073_0010263 3300049589 Bacteria 6877
286 Ga0501073_0015564 3300049589 Bacteria 5517
287 Ga0501073_0055976 3300049589 Bacteria 2759
288 Ga0501073_0075635 3300049589 Bacteria 2344
289 Ga0501074_0021023 3300049590 Bacteria 4739
290 Ga0501079_0003469 3300049741 Bacteria 11592
291 Ga0501080_0004405 3300049742 Bacteria 12513
292 Ga0501080_0005131 3300049742 Bacteria 11667
293 Ga0501080_0022475 3300049742 Bacteria 5842
294 Ga0501080_0023136 3300049742 Bacteria 5762
295 Ga0501080_0047317 3300049742 Bacteria 4004
296 Ga0501080_0056725 3300049742 Bacteria 3646
297 Ga0501080_0150656 3300049742 Bacteria 2150
298 Ga0501083_0007460 3300049744 Bacteria 7750
299 Ga0501083_0055352 3300049744 Bacteria 2660
300 Ga0501035_0007755 3300049822 Bacteria 10027
301 Ga0501035_0008856 3300049822 Bacteria 9364
302 Ga0501035_0009716 3300049822 Bacteria 8949
303 Ga0501035_0020912 3300049822 Bacteria 6014
304 Ga0501035_0023985 3300049822 Bacteria 5598
305 Ga0501035_0038788 3300049822 Bacteria 4312
306 Ga0501035_0079471 3300049822 Bacteria 2897
307 Ga0501035_0109668 3300049822 Bacteria 2419
308 Ga0501044_0000530 3300049823 Bacteria 46371
309 Ga0501044_0000612 3300049823 Bacteria 43350
310 Ga0501044_0008265 3300049823 Bacteria 11412
311 Ga0501044_0008804 3300049823 Bacteria 11038
312 Ga0501044_0011914 3300049823 Bacteria 9422
313 Ga0501044_0018391 3300049823 Bacteria 7488
314 Ga0501044_0061739 3300049823 Bacteria 3833
315 Ga0501044_0064630 3300049823 Bacteria 3735
316 nmdc:mga03683_20016_c1 3300050489 Bacteria 2562
317 nmdc:mga03683_52127_c1 3300050489 Bacteria 1710
318 nmdc:mga0n895_158053_c1 3300050512 Bacteria 2298
319 nmdc:mga0rr50_72867_c1 3300050513 Bacteria 2624
320 nmdc:mga08x19_95_c1 3300050514 Bacteria 78182
321 Ga0500643_000021 3300053087 Bacteria 284326
322 Ga0500555_010669 3300053103 Bacteria 2637
323 Ga0500555_019833 3300053103 Bacteria 1936
324 Ga0500562_000093 3300053108 Bacteria 37199
325 Ga0500595_000559 3300053119 Bacteria 22205
326 Ga0500595_016747 3300053119 Bacteria 2724
327 Ga0500559_0014129 3300053136 Bacteria 3375
328 Ga0500573_0000033 3300053140 Bacteria 117720
329 Ga0500604_0001866 3300053151 Bacteria 5848
330 Ga0500619_002277 3300053154 Bacteria 3658
331 Ga0500634_0003120 3300053161 Bacteria 7278
332 Ga0500639_009781 3300053163 Bacteria 5013
333 Ga0501084_0000769 3300054114 Bacteria 24411
334 Ga0501084_0007212 3300054114 Bacteria 9161
335 Ga0501084_0051555 3300054114 Bacteria 3444
336 Ga0501082_0003476 3300060353 Bacteria 13739
337 Ga0501082_0114893 3300060353 Bacteria 2331

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050489 nmdc:mga03683_52127_c1 nmdc:mga03683_52127_c1_399_1673 404
2 3300014325 Ga0163163_10001131 Ga0163163_1000113117 434
3 3300014968 Ga0157379_10066469 Ga0157379_100664691 435
4 3300053103 Ga0500555_019833 Ga0500555_019833_332_1765 437
5 3300005347 Ga0070668_100005741 Ga0070668_1000057415 446
6 3300025911 Ga0207654_10002392 Ga0207654_100023924 447
7 3300009148 Ga0105243_10001896 Ga0105243_1000189621 452
8 3300009176 Ga0105242_10006696 Ga0105242_100066968 452
9 3300003214 JGI25165J46597_1004596 JGI25165J46597_10045961 453
10 3300025231 Ga0207427_102970 Ga0207427_1029702 453
11 3300025261 Ga0209233_1002175 Ga0209233_10021755 453
12 3300049570 Ga0501033_0029285 Ga0501033_0029285_1247_2752 455
13 3300049574 Ga0501038_0090764 Ga0501038_0090764_837_2342 455
14 3300049822 Ga0501035_0008856 Ga0501035_0008856_6926_8431 455
15 3300049823 Ga0501044_0061739 Ga0501044_0061739_1266_2771 455
16 3300049589 Ga0501073_0075635 Ga0501073_0075635_82_1584 458
17 3300053108 Ga0500562_000093 Ga0500562_000093_8469_9950 460
18 3300054114 Ga0501084_0000769 Ga0501084_0000769_15358_16851 461
19 3300010375 Ga0105239_10022302 Ga0105239_100223027 465
20 3300031548 Ga0307408_100177104 Ga0307408_1001771041 465
21 3300049581 Ga0501047_0012279 Ga0501047_0012279_1367_2875 465
22 3300049583 Ga0501067_0000500 Ga0501067_0000500_5538_7046 465
23 3300049588 Ga0501072_0003562 Ga0501072_0003562_1367_2875 465
24 3300049589 Ga0501073_0010263 Ga0501073_0010263_4000_5508 465
25 3300049742 Ga0501080_0056725 Ga0501080_0056725_1269_2777 465
26 3300054114 Ga0501084_0051555 Ga0501084_0051555_470_1978 465
27 3300025972 Ga0207668_10012019 Ga0207668_100120196 467
28 3300032004 Ga0307414_10029900 Ga0307414_100299004 467
29 3300049570 Ga0501033_0012191 Ga0501033_0012191_1516_2988 467
30 3300049573 Ga0501037_0060519 Ga0501037_0060519_989_2461 467
31 3300049579 Ga0501043_0010886 Ga0501043_0010886_5057_6532 467
32 3300049581 Ga0501047_0082882 Ga0501047_0082882_1056_2528 467
33 3300049586 Ga0501070_0004344 Ga0501070_0004344_8653_10155 467
34 3300049742 Ga0501080_0022475 Ga0501080_0022475_630_2132 467
35 3300049822 Ga0501035_0007755 Ga0501035_0007755_1641_3113 467
36 3300049822 Ga0501035_0023985 Ga0501035_0023985_387_1889 467
37 3300049823 Ga0501044_0018391 Ga0501044_0018391_1155_2627 467
38 3300005336 Ga0070680_100002795 Ga0070680_1000027957 468
39 3300005458 Ga0070681_10000001 Ga0070681_10000001641 468
40 3300005530 Ga0070679_100004699 Ga0070679_1000046997 468
41 3300025912 Ga0207707_10000001 Ga0207707_10000001325 468
42 3300025917 Ga0207660_10001013 Ga0207660_1000101311 468
43 3300025921 Ga0207652_10000353 Ga0207652_1000035334 468
44 3300028556 Ga0265337_1004798 Ga0265337_10047986 468
45 3300028573 Ga0265334_10001637 Ga0265334_100016374 468
46 3300028800 Ga0265338_10021711 Ga0265338_100217117 468
47 3300053161 Ga0500634_0003120 Ga0500634_0003120_2274_3785 468
48 3300005354 Ga0070675_100117716 Ga0070675_1001177162 469
49 3300005364 Ga0070673_100024692 Ga0070673_1000246922 469
50 3300005438 Ga0070701_10036458 Ga0070701_100364582 469
51 3300005459 Ga0068867_100086054 Ga0068867_1000860542 469
52 3300025926 Ga0207659_10033150 Ga0207659_100331503 469
53 3300025934 Ga0207686_10003116 Ga0207686_100031162 469
54 3300025935 Ga0207709_10010796 Ga0207709_100107965 469
55 3300025960 Ga0207651_10041030 Ga0207651_100410302 469
56 3300026089 Ga0207648_10010010 Ga0207648_100100107 469
57 3300006177 Ga0075362_10033851 Ga0075362_100338512 470
58 3300046543 Ga0495645_0038411 Ga0495645_0038411_1485_3002 470
59 3300050489 nmdc:mga03683_20016_c1 nmdc:mga03683_20016_c1_827_2305 470
60 3300009093 Ga0105240_10060100 Ga0105240_100601004 471
61 3300031344 Ga0265316_10065445 Ga0265316_100654452 471
62 3300053119 Ga0500595_000559 Ga0500595_000559_15534_17006 471
63 3300053154 Ga0500619_002277 Ga0500619_002277_1172_2632 471
64 3300005327 Ga0070658_10126770 Ga0070658_101267702 472
65 3300006177 Ga0075362_10001153 Ga0075362_100011539 472
66 3300013102 Ga0157371_10018927 Ga0157371_100189275 472
67 3300035112 Ga0373932_0009946 Ga0373932_0009946_470_1957 472
68 3300049586 Ga0501070_0000015 Ga0501070_0000015_61859_63328 472
69 3300049742 Ga0501080_0004405 Ga0501080_0004405_577_2046 472
70 3300049822 Ga0501035_0038788 Ga0501035_0038788_2217_3686 472
71 3300049823 Ga0501044_0000612 Ga0501044_0000612_2335_3804 472
72 3300005842 Ga0068858_100088711 Ga0068858_1000887112 473
73 3300009177 Ga0105248_10031574 Ga0105248_100315744 473
74 3300025961 Ga0207712_10041984 Ga0207712_100419843 473
75 3300026088 Ga0207641_10099980 Ga0207641_100999802 473
76 3300026121 Ga0207683_10068142 Ga0207683_100681423 473
77 3300049580 Ga0501046_0049813 Ga0501046_0049813_860_2326 473
78 3300005436 Ga0070713_100177125 Ga0070713_1001771251 474
79 3300005563 Ga0068855_100010825 Ga0068855_1000108253 474
80 3300005614 Ga0068856_100202218 Ga0068856_1002022182 474
81 3300009093 Ga0105240_10030765 Ga0105240_100307657 474
82 3300009545 Ga0105237_10020905 Ga0105237_100209056 474
83 3300013105 Ga0157369_10126296 Ga0157369_101262961 474
84 3300025913 Ga0207695_10026008 Ga0207695_100260087 474
85 3300025914 Ga0207671_10009600 Ga0207671_100096005 474
86 3300025928 Ga0207700_10072877 Ga0207700_100728771 474
87 3300025949 Ga0207667_10040539 Ga0207667_100405395 474
88 3300026041 Ga0207639_10141534 Ga0207639_101415341 474
89 3300031595 Ga0265313_10003214 Ga0265313_100032147 474
90 3300049581 Ga0501047_0006888 Ga0501047_0006888_5732_7258 474
91 3300005335 Ga0070666_10000260 Ga0070666_100002603 475
92 3300005339 Ga0070660_100019262 Ga0070660_1000192625 475
93 3300005367 Ga0070667_100011475 Ga0070667_1000114754 475
94 3300025903 Ga0207680_10015387 Ga0207680_100153873 475
95 3300025919 Ga0207657_10024876 Ga0207657_100248764 475
96 3300025986 Ga0207658_10009084 Ga0207658_100090844 475
97 3300031240 Ga0265320_10000217 Ga0265320_1000021737 475
98 3300031241 Ga0265325_10015859 Ga0265325_100158594 475
99 3300053151 Ga0500604_0001866 Ga0500604_0001866_4198_5736 475
100 3300005548 Ga0070665_100004633 Ga0070665_1000046338 476
101 3300028379 Ga0268266_10002956 Ga0268266_1000295615 476
102 3300028577 Ga0265318_10000447 Ga0265318_100004471 476
103 iso_pu_bacteria 2643221580 2643910747 476
104 iso_pu_bacteria 2643221674 2644412013 476
105 iso_pu_bacteria 2932401849 2932405345 476
106 3300005327 Ga0070658_10002358 Ga0070658_100023585 477
107 3300005530 Ga0070679_100089430 Ga0070679_1000894301 477
108 3300025909 Ga0207705_10000390 Ga0207705_1000039026 477
109 3300025921 Ga0207652_10067683 Ga0207652_100676833 477
110 3300028577 Ga0265318_10006027 Ga0265318_100060273 477
111 3300031247 Ga0265340_10019805 Ga0265340_100198052 477
112 3300009545 Ga0105237_10000053 Ga0105237_1000005392 478
113 3300010375 Ga0105239_10001462 Ga0105239_1000146223 478
114 3300025914 Ga0207671_10000555 Ga0207671_1000055535 478
115 3300028379 Ga0268266_10000708 Ga0268266_1000070819 478
116 3300031824 Ga0307413_10028910 Ga0307413_100289101 478
117 3300009174 Ga0105241_10008292 Ga0105241_100082927 479
118 3300011119 Ga0105246_10028377 Ga0105246_100283772 479
119 3300025986 Ga0207658_10026260 Ga0207658_100262603 479
120 3300032004 Ga0307414_10023268 Ga0307414_100232685 479
121 3300046648 Ga0495611_0034104 Ga0495611_0034104_84_1550 479
122 3300048929 Ga0496126_0010949 Ga0496126_0010949_6939_8447 479
123 3300049571 Ga0501034_0009428 Ga0501034_0009428_584_2092 479
124 iso_pu_bacteria 2643221598 2643998675 479
125 3300009551 Ga0105238_10003928 Ga0105238_100039288 480
126 3300014325 Ga0163163_10190767 Ga0163163_101907672 480
127 3300046530 Ga0495654_0048037 Ga0495654_0048037_49_1524 480
128 3300049823 Ga0501044_0011914 Ga0501044_0011914_6278_7771 480
129 3300053103 Ga0500555_010669 Ga0500555_010669_1120_2601 480
130 3300009545 Ga0105237_10067252 Ga0105237_100672522 481
131 3300009551 Ga0105238_10032188 Ga0105238_100321883 481
132 3300046538 Ga0495609_0009095 Ga0495609_0009095_1419_2897 481
133 3300046557 Ga0495622_0001953 Ga0495622_0001953_2213_3688 481
134 3300053136 Ga0500559_0014129 Ga0500559_0014129_1094_2569 481
135 3300005344 Ga0070661_100000041 Ga0070661_10000004181 482
136 3300009093 Ga0105240_10032682 Ga0105240_100326825 482
137 3300009551 Ga0105238_10268894 Ga0105238_102688941 482
138 3300025913 Ga0207695_10026386 Ga0207695_100263864 482
139 3300025920 Ga0207649_10000437 Ga0207649_100004372 482
140 3300025924 Ga0207694_10046300 Ga0207694_100463001 482
141 3300028800 Ga0265338_10004338 Ga0265338_1000433814 482
142 3300031238 Ga0265332_10023861 Ga0265332_100238611 482
143 3300031241 Ga0265325_10023108 Ga0265325_100231082 482
144 3300031250 Ga0265331_10009066 Ga0265331_100090666 482
145 3300031251 Ga0265327_10006845 Ga0265327_100068456 482
146 3300053087 Ga0500643_000021 Ga0500643_000021_144916_146445 483
147 3300031247 Ga0265340_10013804 Ga0265340_100138043 484
148 3300031251 Ga0265327_10000869 Ga0265327_100008696 484
149 3300037418 Ga0395900_0219999 Ga0395900_0219999_129_1625 484
150 3300037466 Ga0395898_0057155 Ga0395898_0057155_1565_3061 484
151 3300039437 Ga0436365_0238484 Ga0436365_0238484_227_1720 484
152 3300039437 Ga0436365_1650855 Ga0436365_1650855_42473_43972 484
153 3300005439 Ga0070711_100041192 Ga0070711_1000411924 486
154 3300006175 Ga0070712_100005593 Ga0070712_1000055939 486
155 3300009093 Ga0105240_10013229 Ga0105240_100132297 486
156 3300014968 Ga0157379_10223274 Ga0157379_102232742 486
157 3300025929 Ga0207664_10004717 Ga0207664_100047177 486
158 3300031247 Ga0265340_10000276 Ga0265340_1000027615 486
159 3300031247 Ga0265340_10003116 Ga0265340_100031167 486
160 3300031249 Ga0265339_10028131 Ga0265339_100281314 486
161 3300031595 Ga0265313_10024185 Ga0265313_100241852 486
162 3300031712 Ga0265342_10015478 Ga0265342_100154784 486
163 3300049822 Ga0501035_0109668 Ga0501035_0109668_483_1979 486
164 3300025913 Ga0207695_10063607 Ga0207695_100636073 487
165 3300049822 Ga0501035_0079471 Ga0501035_0079471_912_2435 487
166 3300005339 Ga0070660_100006376 Ga0070660_1000063767 488
167 3300005341 Ga0070691_10004788 Ga0070691_100047886 488
168 3300005530 Ga0070679_100040539 Ga0070679_1000405393 488
169 3300005563 Ga0068855_100006915 Ga0068855_10000691510 488
170 3300009177 Ga0105248_10000013 Ga0105248_10000013218 488
171 3300025912 Ga0207707_10004041 Ga0207707_100040419 488
172 3300025917 Ga0207660_10001356 Ga0207660_1000135610 488
173 3300025919 Ga0207657_10002224 Ga0207657_1000222411 488
174 3300025921 Ga0207652_10002876 Ga0207652_100028765 488
175 3300025924 Ga0207694_10008634 Ga0207694_100086342 488
176 3300025941 Ga0207711_10000003 Ga0207711_10000003217 488
177 3300026035 Ga0207703_10040995 Ga0207703_100409954 488
178 3300048924 Ga0496121_0005260 Ga0496121_0005260_13788_15314 488
179 3300049579 Ga0501043_0056505 Ga0501043_0056505_1532_3034 488
180 3300005434 Ga0070709_10004594 Ga0070709_100045941 489
181 3300005435 Ga0070714_100056442 Ga0070714_1000564423 489
182 3300005436 Ga0070713_100000003 Ga0070713_10000000341 489
183 3300005539 Ga0068853_100001311 Ga0068853_10000131125 489
184 3300006175 Ga0070712_100000326 Ga0070712_1000003268 489
185 3300006914 Ga0075436_100000038 Ga0075436_10000003875 489
186 3300007076 Ga0075435_100094469 Ga0075435_1000944691 489
187 3300025906 Ga0207699_10002435 Ga0207699_100024354 489
188 3300025915 Ga0207693_10000369 Ga0207693_100003698 489
189 3300025924 Ga0207694_10000125 Ga0207694_1000012528 489
190 3300025928 Ga0207700_10000083 Ga0207700_1000008341 489
191 3300025929 Ga0207664_10047589 Ga0207664_100475892 489
192 3300026041 Ga0207639_10032673 Ga0207639_100326732 489
193 3300026078 Ga0207702_10000045 Ga0207702_10000045140 489
194 3300026142 Ga0207698_10005517 Ga0207698_100055171 489
195 3300028800 Ga0265338_10000017 Ga0265338_1000001724 489
196 3300031241 Ga0265325_10000008 Ga0265325_1000000881 489
197 3300031241 Ga0265325_10002516 Ga0265325_100025167 489
198 3300031249 Ga0265339_10001046 Ga0265339_1000104613 489
199 3300031249 Ga0265339_10010871 Ga0265339_100108714 489
200 3300031250 Ga0265331_10008709 Ga0265331_100087095 489
201 3300031344 Ga0265316_10078569 Ga0265316_100785691 489
202 3300031595 Ga0265313_10004608 Ga0265313_100046089 489
203 3300031711 Ga0265314_10000188 Ga0265314_1000018885 489
204 3300031711 Ga0265314_10045919 Ga0265314_100459194 489
205 3300031712 Ga0265342_10002290 Ga0265342_100022907 489
206 3300031712 Ga0265342_10011774 Ga0265342_100117746 489
207 3300049580 Ga0501046_0015421 Ga0501046_0015421_130_1638 489
208 3300049581 Ga0501047_0030147 Ga0501047_0030147_1032_2540 489
209 3300049582 Ga0501048_0156747 Ga0501048_0156747_52_1560 489
210 3300049742 Ga0501080_0005131 Ga0501080_0005131_8338_9852 489
211 3300049742 Ga0501080_0047317 Ga0501080_0047317_2011_3519 489
212 3300049823 Ga0501044_0008265 Ga0501044_0008265_3543_5051 489
213 3300050512 nmdc:mga0n895_158053_c1 nmdc:mga0n895_158053_c1_411_1928 489
214 3300050513 nmdc:mga0rr50_72867_c1 nmdc:mga0rr50_72867_c1_184_1701 489
215 3300050514 nmdc:mga08x19_95_c1 nmdc:mga08x19_95_c1_14048_15565 489
216 3300005335 Ga0070666_10046348 Ga0070666_100463483 490
217 3300005341 Ga0070691_10002989 Ga0070691_100029896 490
218 3300005539 Ga0068853_100031790 Ga0068853_1000317902 490
219 3300005545 Ga0070695_100005828 Ga0070695_1000058289 490
220 3300005563 Ga0068855_100000142 Ga0068855_10000014276 490
221 3300005563 Ga0068855_100036170 Ga0068855_1000361705 490
222 3300005577 Ga0068857_100000050 Ga0068857_10000005069 490
223 3300005614 Ga0068856_100014680 Ga0068856_1000146809 490
224 3300005616 Ga0068852_100006261 Ga0068852_1000062617 490
225 3300005616 Ga0068852_100163441 Ga0068852_1001634412 490
226 3300005842 Ga0068858_100021564 Ga0068858_1000215644 490
227 3300009093 Ga0105240_10004248 Ga0105240_1000424818 490
228 3300009093 Ga0105240_10005507 Ga0105240_1000550718 490
229 3300009174 Ga0105241_10022992 Ga0105241_100229922 490
230 3300009174 Ga0105241_10025651 Ga0105241_100256512 490
231 3300009545 Ga0105237_10003068 Ga0105237_1000306821 490
232 3300009545 Ga0105237_10024275 Ga0105237_100242757 490
233 3300009551 Ga0105238_10017441 Ga0105238_100174415 490
234 3300009553 Ga0105249_10112698 Ga0105249_101126982 490
235 3300010375 Ga0105239_10003590 Ga0105239_1000359015 490
236 3300013100 Ga0157373_10001769 Ga0157373_1000176914 490
237 3300013104 Ga0157370_10028545 Ga0157370_100285454 490
238 3300013105 Ga0157369_10003941 Ga0157369_100039417 490
239 3300013297 Ga0157378_10026791 Ga0157378_100267914 490
240 3300013307 Ga0157372_10034494 Ga0157372_100344945 490
241 3300014968 Ga0157379_10001517 Ga0157379_1000151714 490
242 3300014968 Ga0157379_10003202 Ga0157379_1000320216 490
243 3300014968 Ga0157379_10137606 Ga0157379_101376061 490
244 3300025913 Ga0207695_10000003 Ga0207695_10000003884 490
245 3300025914 Ga0207671_10005690 Ga0207671_100056905 490
246 3300025928 Ga0207700_10125898 Ga0207700_101258982 490
247 3300025941 Ga0207711_10010769 Ga0207711_100107695 490
248 3300025949 Ga0207667_10000092 Ga0207667_1000009273 490
249 3300025949 Ga0207667_10041081 Ga0207667_100410813 490
250 3300025981 Ga0207640_10020196 Ga0207640_100201963 490
251 3300026035 Ga0207703_10019358 Ga0207703_100193585 490
252 3300026041 Ga0207639_10053858 Ga0207639_100538584 490
253 3300026041 Ga0207639_10070828 Ga0207639_100708282 490
254 3300026078 Ga0207702_10024763 Ga0207702_100247633 490
255 3300026116 Ga0207674_10000026 Ga0207674_1000002667 490
256 3300028381 Ga0268264_10087783 Ga0268264_100877833 490
257 3300028800 Ga0265338_10108694 Ga0265338_101086942 490
258 3300031241 Ga0265325_10000092 Ga0265325_1000009213 490
259 3300031249 Ga0265339_10009111 Ga0265339_100091117 490
260 3300031250 Ga0265331_10000020 Ga0265331_10000020125 490
261 3300031344 Ga0265316_10027957 Ga0265316_100279573 490
262 3300031595 Ga0265313_10002285 Ga0265313_1000228515 490
263 3300031711 Ga0265314_10026953 Ga0265314_100269533 490
264 3300031730 Ga0307516_10021177 Ga0307516_100211778 490
265 3300035172 Ga0373955_0004019 Ga0373955_0004019_1202_2719 490
266 3300035695 Ga0373927_0029913 Ga0373927_0029913_1099_2616 490
267 3300036401 Ga0373937_0002752 Ga0373937_0002752_3576_5093 490
268 3300037068 Ga0373925_0051076 Ga0373925_0051076_509_2026 490
269 3300037068 Ga0373925_0079211 Ga0373925_0079211_862_2379 490
270 3300046679 Ga0495623_0045574 Ga0495623_0045574_538_2055 490
271 3300049460 Ga0495682_0002045 Ga0495682_0002045_4744_6261 490
272 3300049581 Ga0501047_0011126 Ga0501047_0011126_465_1970 490
273 3300048929 Ga0496126_0004966 Ga0496126_0004966_5009_6529 491
274 3300049570 Ga0501033_0037436 Ga0501033_0037436_1089_2609 491
275 3300049571 Ga0501034_0014496 Ga0501034_0014496_3613_5133 491
276 3300049572 Ga0501036_0033444 Ga0501036_0033444_967_2487 491
277 3300049574 Ga0501038_0071105 Ga0501038_0071105_865_2385 491
278 3300049575 Ga0501039_0046275 Ga0501039_0046275_1641_3161 491
279 3300049589 Ga0501073_0055976 Ga0501073_0055976_760_2280 491
280 3300049742 Ga0501080_0150656 Ga0501080_0150656_61_1581 491
281 3300049822 Ga0501035_0020912 Ga0501035_0020912_713_2233 491
282 3300049823 Ga0501044_0008804 Ga0501044_0008804_4940_6460 491
283 3300053163 Ga0500639_009781 Ga0500639_009781_2527_4032 491
284 3300060353 Ga0501082_0114893 Ga0501082_0114893_193_1713 491
285 3300028800 Ga0265338_10010768 Ga0265338_100107686 492
286 3300028800 Ga0265338_10006800 Ga0265338_100068007 493
287 3300031344 Ga0265316_10022422 Ga0265316_100224225 493
288 3300031711 Ga0265314_10001476 Ga0265314_1000147615 493
289 3300049570 Ga0501033_0053181 Ga0501033_0053181_75_1610 495
290 3300049574 Ga0501038_0038455 Ga0501038_0038455_1735_3270 495
291 3300049581 Ga0501047_0012552 Ga0501047_0012552_5108_6643 495
292 3300049823 Ga0501044_0000530 Ga0501044_0000530_38027_39562 495
293 3300049823 Ga0501044_0064630 Ga0501044_0064630_2086_3606 495
294 3300005335 Ga0070666_10092003 Ga0070666_100920032 497
295 3300005339 Ga0070660_100017959 Ga0070660_1000179593 497
296 3300005366 Ga0070659_100024396 Ga0070659_1000243964 497
297 3300005530 Ga0070679_100038666 Ga0070679_1000386662 497
298 3300005539 Ga0068853_100023383 Ga0068853_1000233833 497
299 3300005548 Ga0070665_100051690 Ga0070665_1000516906 497
300 3300006237 Ga0097621_100008147 Ga0097621_1000081476 497
301 3300006358 Ga0068871_100000015 Ga0068871_1000000156 497
302 3300013104 Ga0157370_10123801 Ga0157370_101238012 497
303 3300025919 Ga0207657_10006944 Ga0207657_1000694411 497
304 3300025921 Ga0207652_10037380 Ga0207652_100373806 497
305 3300025932 Ga0207690_10030959 Ga0207690_100309593 497
306 3300026041 Ga0207639_10050903 Ga0207639_100509033 497
307 3300026116 Ga0207674_10053735 Ga0207674_100537353 497
308 3300028379 Ga0268266_10011691 Ga0268266_100116918 497
309 3300031730 Ga0307516_10057415 Ga0307516_100574152 497
310 3300035691 Ga0373931_0058601 Ga0373931_0058601_193_1722 497
311 3300049569 Ga0501032_0005328 Ga0501032_0005328_4836_6359 497
312 3300049570 Ga0501033_0006428 Ga0501033_0006428_4468_5991 497
313 3300049571 Ga0501034_0035764 Ga0501034_0035764_429_1952 497
314 3300049572 Ga0501036_0007778 Ga0501036_0007778_2333_3856 497
315 3300049574 Ga0501038_0002891 Ga0501038_0002891_766_2289 497
316 3300049575 Ga0501039_0005124 Ga0501039_0005124_4603_6126 497
317 3300049579 Ga0501043_0022476 Ga0501043_0022476_2978_4501 497
318 3300049580 Ga0501046_0000911 Ga0501046_0000911_18358_19881 497
319 3300049581 Ga0501047_0017251 Ga0501047_0017251_568_2091 497
320 3300049581 Ga0501047_0020364 Ga0501047_0020364_703_2226 497
321 3300049586 Ga0501070_0003152 Ga0501070_0003152_754_2277 497
322 3300049589 Ga0501073_0015564 Ga0501073_0015564_2592_4115 497
323 3300049590 Ga0501074_0021023 Ga0501074_0021023_830_2353 497
324 3300049741 Ga0501079_0003469 Ga0501079_0003469_9354_10877 497
325 3300049742 Ga0501080_0023136 Ga0501080_0023136_1403_2926 497
326 3300049744 Ga0501083_0007460 Ga0501083_0007460_4340_5863 497
327 3300049822 Ga0501035_0009716 Ga0501035_0009716_1575_3098 497
328 3300053119 Ga0500595_016747 Ga0500595_016747_1084_2607 497
329 3300053140 Ga0500573_0000033 Ga0500573_0000033_66489_68015 497
330 3300054114 Ga0501084_0007212 Ga0501084_0007212_3457_4980 497
331 3300060353 Ga0501082_0003476 Ga0501082_0003476_4649_6172 497
332 3300005563 Ga0068855_100144670 Ga0068855_1001446701 498
333 3300025921 Ga0207652_10070158 Ga0207652_100701582 498
334 3300026041 Ga0207639_10062760 Ga0207639_100627602 498
335 3300026116 Ga0207674_10178871 Ga0207674_101788712 498
336 3300049744 Ga0501083_0055352 Ga0501083_0055352_934_2463 498
337 3300003214 JGI25165J46597_1000013 JGI25165J46597_1000013301 499
338 3300003215 JGI25153J46596_10001136 JGI25153J46596_100011368 499
339 3300025261 Ga0209233_1000013 Ga0209233_1000013549 499
340 3300025261 Ga0209233_1006417 Ga0209233_10064171 499
341 3300025297 Ga0209758_1000036 Ga0209758_1000036407 499

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04552

Sigma54_DBD

Sigma-54, DNA binding domain

324

484

0.98

PF00309

Sigma54_AID

Sigma-54 factor, Activator interacting domain (AID)

7

52

0.97

PF04963

Sigma54_CBD

Sigma-54 factor, core binding domain

122

310

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4a12-assembly1.cif.gz_B structure of the global transcription regulator fapr from staphylococcus aureus in complex with dna operator 0.8966 429 496
2o9l-assembly1.cif.gz_A amber refined nmr structure of the sigma-54 rpon domain bound to the-24 promoter element 0.8675 434 487
2p5l-assembly2.cif.gz_H crystal structure of a dimer of n-terminal domains of ahrc in complex with an 18bp dna operator site 0.8652 433 479
2ahq-assembly1.cif.gz_A solution structure of the c-terminal rpon domain of sigma-54 from aquifex aeolicus 0.8012 433 478
2o9l-assembly1.cif.gz_A amber refined nmr structure of the sigma-54 rpon domain bound to the-24 promoter element 0.7467 434 487
ID Description Score Start End Superfamily
2o9lA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8675 434 487 1.10.10.60
3lajA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8661 434 478 1.10.10.10
2p5lH00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8652 433 479 1.10.10.10
2p5lC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8554 433 479 1.10.10.10
5ui5V01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;RNA polymerase sigma-54 factor, core-binding domain 0.8543 139 207 1.10.10.1330
ID Description Score Start End GO Terms
AF-A0A519Y5H6-F1-model_v4 deleted 0.9946 352 495
AF-A0A4Q0S3Q9-F1-model_v4 RNA polymerase sigma54 factor 0.9917 328 488 GO:0001216
GO:0016987
AF-A0A836TNG6-F1-model_v4 RNA polymerase sigma-54 factor 0.9866 289 493 GO:0001216
GO:0016987
AF-A0A529XBV5-F1-model_v4 deleted 0.9844 322 497
AF-A0A3N5P7X3-F1-model_v4 RNA polymerase sigma factor 54 DNA-binding domain-containing protein 0.981 326 488 GO:0001216
GO:0016987

Feature Viewer

pLDDT pTM Quality
75.98 0.53 Medium
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Predicted Structure (AlphaFold2)

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