F413662

General Info

Members Datasets Scaffolds Average Seq Length
338 165 676 334

Family's Representative Sequence

Representative Sequence 3300046528|Ga0495642_0016563|Ga0495642_0016563_30_1184
Length 384
Sequence LESALERIEIRSRRREGYSFLDSASLDNAIVPFRTIAGHSRLLSLLARAIARDSMPPAVLMAGPAGVGKRLTAVAVAQAINCLQPVVAPGPLRMESAAPRDPAHAGEFERDACGECASCRRIARGTHPDVVTVEPGESGSIKIEQLRDVIDRSQFRPFEGRRRVVIIDEADAAAGPAQSALLKTLEEPPSASVFILVSSIPDALLPTVLSRCPRLRFGPLTPGDVARVLMRDHGYSEHDARAAAADADGSVGRALQSRSDDLIEAREDAQRILQASARDTDPVKRINVARDLMEGKRTLAEERIRLAVRLRSLGSLLRDVGIIASRADRAMLANADLEGRLETLSSSFDADRSQRAYAAVDRALXXLDRNASPKVVADWLLLEL

Samples

Sample ID Description Type Environment
1 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
50 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
51 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
112 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
120 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
121 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
122 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
123 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
124 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
125 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
126 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
127 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
128 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
129 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
160 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.89
Nodule 0
Rhizoplane 1.18
Rhizosphere 97.93
Stem 0
Stem Tuber 0
Unclassified 14.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495642_0016563 3300046528 Bacteria 2875
2 MBSR1b_contig_4531297 2162886012 Unclassified 1416
3 JGI24751J29686_10020283 3300002459 Bacteria 1377
4 Ga0065712_10001060 3300005290 Bacteria 12555
5 Ga0065712_10163954 3300005290 Bacteria 1284
6 Ga0065715_10005914 3300005293 Bacteria 5377
7 Ga0065715_10177250 3300005293 Unclassified 1502
8 Ga0065715_10187750 3300005293 Bacteria 1434
9 Ga0070683_100019014 3300005329 Bacteria 6096
10 Ga0070683_100069500 3300005329 Bacteria 3284
11 Ga0070690_100018228 3300005330 Bacteria 4236
12 Ga0070670_100205600 3300005331 Bacteria 1711
13 Ga0070670_100249400 3300005331 Bacteria 1546
14 Ga0070666_10031787 3300005335 Bacteria 3485
15 Ga0070680_100102303 3300005336 Bacteria 2379
16 Ga0070680_100153010 3300005336 Bacteria 1937
17 Ga0068868_100041502 3300005338 Bacteria 3585
18 Ga0070689_100007303 3300005340 Bacteria 7710
19 Ga0070689_100018997 3300005340 Bacteria 5075
20 Ga0070661_100010713 3300005344 Bacteria 6379
21 Ga0070661_100145150 3300005344 Bacteria 1791
22 Ga0070692_10033904 3300005345 Bacteria 2575
23 Ga0070668_100037155 3300005347 Bacteria 3718
24 Ga0070669_100006364 3300005353 Bacteria 8507
25 Ga0070675_100000943 3300005354 Bacteria 20704
26 Ga0070675_100031234 3300005354 Bacteria 4305
27 Ga0070671_100035131 3300005355 Bacteria 4152
28 Ga0070673_100035031 3300005364 Bacteria 3804
29 Ga0070673_100160039 3300005364 Bacteria 1914
30 Ga0070688_100012274 3300005365 Bacteria 4795
31 Ga0070688_100015407 3300005365 Bacteria 4349
32 Ga0070688_100092205 3300005365 Unclassified 1981
33 Ga0070711_100186413 3300005439 Bacteria 1591
34 Ga0070705_100022414 3300005440 Bacteria 3375
35 Ga0070705_100028056 3300005440 Bacteria 3079
36 Ga0070705_100093564 3300005440 Bacteria 1879
37 Ga0070705_100113153 3300005440 Bacteria 1738
38 Ga0070700_100010214 3300005441 Bacteria 5179
39 Ga0070694_100001099 3300005444 Bacteria 15464
40 Ga0070708_100152322 3300005445 Bacteria 2151
41 Ga0070681_10003487 3300005458 Bacteria 14729
42 Ga0070681_10023854 3300005458 Bacteria 6158
43 Ga0070681_10224459 3300005458 Bacteria 1793
44 Ga0068867_100002647 3300005459 Bacteria 12634
45 Ga0068867_100389860 3300005459 Bacteria 1172
46 Ga0070706_100134820 3300005467 Bacteria 2305
47 Ga0070707_100034930 3300005468 Bacteria 4794
48 Ga0070707_100155852 3300005468 Bacteria 2225
49 Ga0070707_100374128 3300005468 Unclassified 1384
50 Ga0070707_100391753 3300005468 Bacteria 1349
51 Ga0070698_100002109 3300005471 Bacteria 22098
52 Ga0070698_100015946 3300005471 Bacteria 7934
53 Ga0070698_100097138 3300005471 Bacteria 2922
54 Ga0070699_100000499 3300005518 Bacteria 37297
55 Ga0070699_100008186 3300005518 Bacteria 9071
56 Ga0070699_100010870 3300005518 Bacteria 7874
57 Ga0070699_100024276 3300005518 Bacteria 5223
58 Ga0070679_100041927 3300005530 Bacteria 4557
59 Ga0070697_100041632 3300005536 Bacteria 3719
60 Ga0070697_100054438 3300005536 Bacteria 3252
61 Ga0070697_100222275 3300005536 Bacteria 1610
62 Ga0070672_100010909 3300005543 Bacteria 6321
63 Ga0070686_100055653 3300005544 Unclassified 2535
64 Ga0070686_100144262 3300005544 Unclassified 1661
65 Ga0070695_100000449 3300005545 Bacteria 21411
66 Ga0070696_100011053 3300005546 Bacteria 6045
67 Ga0070696_100014486 3300005546 Bacteria 5291
68 Ga0070696_100044099 3300005546 Bacteria 3088
69 Ga0070665_100002710 3300005548 Bacteria 19212
70 Ga0070665_100184991 3300005548 Unclassified 2084
71 Ga0070704_100001784 3300005549 Bacteria 11808
72 Ga0070704_100005504 3300005549 Bacteria 7381
73 Ga0068855_100462480 3300005563 Bacteria 1383
74 Ga0070702_100025033 3300005615 Bacteria 3193
75 Ga0068859_100001625 3300005617 Bacteria 22975
76 Ga0068859_100004974 3300005617 Bacteria 13499
77 Ga0068859_100013736 3300005617 Bacteria 8118
78 Ga0068859_100207935 3300005617 Bacteria 2043
79 Ga0068864_100008371 3300005618 Bacteria 8533
80 Ga0068864_100055535 3300005618 Bacteria 3420
81 Ga0068864_100105298 3300005618 Unclassified 2507
82 Ga0068861_100380678 3300005719 Bacteria 1247
83 Ga0068870_10026198 3300005840 Bacteria 2905
84 Ga0068870_10028821 3300005840 Bacteria 2791
85 Ga0068870_10103395 3300005840 Bacteria 1614
86 Ga0068863_100062670 3300005841 Bacteria 3516
87 Ga0068863_100099842 3300005841 Bacteria 2758
88 Ga0068858_100029183 3300005842 Bacteria 5121
89 Ga0068858_100074180 3300005842 Bacteria 3159
90 Ga0068862_100001404 3300005844 Bacteria 22328
91 Ga0068862_100485638 3300005844 Bacteria 1170
92 Ga0075368_10080180 3300006042 Bacteria 1328
93 Ga0075364_10083989 3300006051 Bacteria 2108
94 Ga0070712_100212300 3300006175 Bacteria 1527
95 Ga0097621_100183144 3300006237 Bacteria 1810
96 Ga0097621_100336996 3300006237 Unclassified 1339
97 Ga0075428_100000563 3300006844 Bacteria 37820
98 Ga0075428_100006130 3300006844 Bacteria 13379
99 Ga0075428_100007160 3300006844 Bacteria 12357
100 Ga0075428_100019089 3300006844 Bacteria 7582
101 Ga0075428_100093794 3300006844 Bacteria 3273
102 Ga0075428_100352240 3300006844 Unclassified 1580
103 Ga0075430_100001235 3300006846 Bacteria 20564
104 Ga0075430_100013106 3300006846 Bacteria 7065
105 Ga0075430_100043442 3300006846 Bacteria 3798
106 Ga0075430_100169587 3300006846 Bacteria 1816
107 Ga0075430_100232326 3300006846 Bacteria 1529
108 Ga0075431_100044124 3300006847 Bacteria 4599
109 Ga0075431_100045888 3300006847 Bacteria 4504
110 Ga0075431_100084158 3300006847 Bacteria 3284
111 Ga0075431_100096334 3300006847 Bacteria 3054
112 Ga0075433_10041819 3300006852 Bacteria 3973
113 Ga0075433_10056318 3300006852 Bacteria 3433
114 Ga0075434_100006038 3300006871 Bacteria 11075
115 Ga0075434_100143622 3300006871 Bacteria 2407
116 Ga0075434_100181665 3300006871 Bacteria 2124
117 Ga0075429_100002422 3300006880 Bacteria 15708
118 Ga0075429_100012661 3300006880 Bacteria 7316
119 Ga0075429_100014274 3300006880 Bacteria 6889
120 Ga0075429_100082464 3300006880 Bacteria 2803
121 Ga0075429_100085548 3300006880 Bacteria 2748
122 Ga0075429_100482003 3300006880 Bacteria 1087
123 Ga0097620_100001625 3300006931 Bacteria 22975
124 Ga0097620_100004974 3300006931 Bacteria 13499
125 Ga0097620_100013736 3300006931 Bacteria 8118
126 Ga0097620_100207937 3300006931 Bacteria 2043
127 Ga0075435_100020440 3300007076 Bacteria 5074
128 Ga0075435_100027661 3300007076 Bacteria 4439
129 Ga0075435_100038741 3300007076 Bacteria 3801
130 Ga0075435_100058298 3300007076 Bacteria 3127
131 Ga0075435_100247538 3300007076 Unclassified 1517
132 Ga0111539_10000037 3300009094 Bacteria 143023
133 Ga0111539_10000262 3300009094 Bacteria 62799
134 Ga0111539_10003722 3300009094 Bacteria 20065
135 Ga0111539_10006769 3300009094 Bacteria 14750
136 Ga0111539_10006803 3300009094 Bacteria 14708
137 Ga0111539_10008716 3300009094 Bacteria 12867
138 Ga0111539_10010211 3300009094 Bacteria 11832
139 Ga0111539_10153003 3300009094 Unclassified 2700
140 Ga0111539_10171859 3300009094 Bacteria 2532
141 Ga0111539_10388494 3300009094 Bacteria 1625
142 Ga0105245_10006383 3300009098 Bacteria 10373
143 Ga0105247_10006853 3300009101 Bacteria 7021
144 Ga0114129_10000019 3300009147 Bacteria 124932
145 Ga0114129_10000827 3300009147 Bacteria 39985
146 Ga0114129_10001032 3300009147 Bacteria 36412
147 Ga0114129_10022927 3300009147 Bacteria 8855
148 Ga0114129_10036786 3300009147 Bacteria 6912
149 Ga0114129_10043707 3300009147 Bacteria 6304
150 Ga0114129_10060162 3300009147 Bacteria 5311
151 Ga0114129_10145735 3300009147 Unclassified 3244
152 Ga0114129_10233504 3300009147 Bacteria 2476
153 Ga0114129_10334334 3300009147 Unclassified 2010
154 Ga0105243_10081073 3300009148 Bacteria 2648
155 Ga0105242_10016718 3300009176 Bacteria 5706
156 Ga0105238_10187217 3300009551 Bacteria 2046
157 Ga0157374_10013781 3300013296 Bacteria 7062
158 Ga0157375_10001240 3300013308 Bacteria 22050
159 Ga0157375_10106695 3300013308 Unclassified 2893
160 Ga0157380_10075079 3300014326 Bacteria 2746
161 Ga0157380_10089209 3300014326 Bacteria 2539
162 Ga0157377_10038891 3300014745 Unclassified 2629
163 Ga0157377_10044185 3300014745 Bacteria 2483
164 Ga0157379_10109983 3300014968 Bacteria 2475
165 Ga0157379_10119935 3300014968 Bacteria 2366
166 Ga0157379_10213827 3300014968 Unclassified 1746
167 Ga0157376_10056886 3300014969 Bacteria 3270
168 Ga0163161_10130445 3300017792 Unclassified 1895
169 Ga0207643_10009791 3300025908 Bacteria 5147
170 Ga0207643_10032464 3300025908 Bacteria 2916
171 Ga0207643_10047129 3300025908 Bacteria 2437
172 Ga0207707_10029062 3300025912 Bacteria 4831
173 Ga0207707_10033889 3300025912 Bacteria 4468
174 Ga0207663_10147413 3300025916 Bacteria 1647
175 Ga0207660_10121564 3300025917 Bacteria 1978
176 Ga0207660_10313678 3300025917 Bacteria 1251
177 Ga0207660_10357104 3300025917 Unclassified 1172
178 Ga0207662_10062236 3300025918 Unclassified 2242
179 Ga0207646_10152611 3300025922 Bacteria 2083
180 Ga0207681_10000855 3300025923 Bacteria 20009
181 Ga0207681_10142566 3300025923 Bacteria 1786
182 Ga0207650_10072201 3300025925 Bacteria 2598
183 Ga0207650_10182068 3300025925 Bacteria 1675
184 Ga0207659_10001690 3300025926 Bacteria 13097
185 Ga0207659_10216516 3300025926 Bacteria 1537
186 Ga0207659_10309971 3300025926 Bacteria 1299
187 Ga0207659_10391523 3300025926 Unclassified 1161
188 Ga0207644_10028762 3300025931 Bacteria 3851
189 Ga0207670_10002817 3300025936 Bacteria 9168
190 Ga0207669_10182021 3300025937 Bacteria 1508
191 Ga0207691_10025513 3300025940 Bacteria 5548
192 Ga0207711_10084848 3300025941 Bacteria 2773
193 Ga0207651_10130752 3300025960 Bacteria 1921
194 Ga0207651_10170027 3300025960 Unclassified 1718
195 Ga0207651_10192690 3300025960 Unclassified 1627
196 Ga0207651_10330576 3300025960 Bacteria 1277
197 Ga0207651_10360173 3300025960 Bacteria 1227
198 Ga0207668_10084612 3300025972 Bacteria 2312
199 Ga0207677_10046642 3300026023 Bacteria 2903
200 Ga0207703_10033316 3300026035 Bacteria 4083
201 Ga0207703_10163434 3300026035 Bacteria 1952
202 Ga0207639_10189897 3300026041 Bacteria 1754
203 Ga0207678_10047779 3300026067 Bacteria 3700
204 Ga0207708_10003200 3300026075 Bacteria 12063
205 Ga0207648_10001246 3300026089 Bacteria 28476
206 Ga0207648_10296750 3300026089 Unclassified 1448
207 Ga0207676_10002646 3300026095 Bacteria 12750
208 Ga0207676_10084456 3300026095 Unclassified 2588
209 Ga0207676_10160303 3300026095 Unclassified 1948
210 Ga0207674_10087220 3300026116 Bacteria 3115
211 Ga0207675_100002358 3300026118 Bacteria 18693
212 Ga0207428_10000608 3300027907 Bacteria 42445
213 Ga0207428_10001026 3300027907 Bacteria 30843
214 Ga0207428_10004063 3300027907 Bacteria 14030
215 Ga0207428_10005268 3300027907 Bacteria 12076
216 Ga0207428_10046036 3300027907 Bacteria 3510
217 Ga0207428_10070283 3300027907 Bacteria 2751
218 Ga0268266_10004990 3300028379 Bacteria 12544
219 Ga0268265_10000420 3300028380 Bacteria 45660
220 Ga0268264_10028750 3300028381 Unclassified 4550
221 Ga0307405_10034214 3300031731 Bacteria 3021
222 Ga0307406_10116193 3300031901 Bacteria 1851
223 Ga0307412_10028857 3300031911 Bacteria 3477
224 Ga0307412_10147690 3300031911 Bacteria 1730
225 Ga0307416_100021428 3300032002 Bacteria 4639
226 Ga0307416_100551940 3300032002 Unclassified 1225
227 Ga0307411_10029088 3300032005 Bacteria 3369
228 Ga0307411_10153173 3300032005 Bacteria 1716
229 Ga0307415_100052371 3300032126 Bacteria 2775
230 Ga0307415_100110538 3300032126 Bacteria 2038
231 Ga0373937_0117815 3300036401 Bacteria 2474
232 Ga0439450_001047 3300042008 Bacteria 3898
233 Ga0439464_0008240 3300042439 Bacteria 2731
234 Ga0451577_0135333 3300042876 Unclassified 2213
235 Ga0451576_0045834 3300045051 Bacteria 4603
236 Ga0495603_0042824 3300046455 Bacteria 2705
237 Ga0495603_0054539 3300046455 Bacteria 2369
238 Ga0495629_0069267 3300046459 Bacteria 2462
239 Ga0495582_0137785 3300046473 Bacteria 1382
240 Ga0495585_0079850 3300046492 Bacteria 1774
241 Ga0495594_0012754 3300046499 Bacteria 4384
242 Ga0495586_0178013 3300046535 Unclassified 1203
243 Ga0495598_0033742 3300046537 Bacteria 1454
244 Ga0495609_0066715 3300046538 Unclassified 1585
245 Ga0495621_0003235 3300046539 Bacteria 4476
246 Ga0495621_0004611 3300046539 Bacteria 3894
247 Ga0495633_0023296 3300046558 Bacteria 3069
248 Ga0495659_0003994 3300046664 Bacteria 4671
249 Ga0495659_0007961 3300046664 Bacteria 3364
250 Ga0495659_0031490 3300046664 Bacteria 1851
251 Ga0495588_0002317 3300046674 Bacteria 8154
252 Ga0495657_0128014 3300046675 Unclassified 1593
253 Ga0495669_0020099 3300046684 Bacteria 2887
254 Ga0495670_0017245 3300046691 Bacteria 3554
255 Ga0496104_0029668 3300048907 Bacteria 5075
256 Ga0496109_0349366 3300048912 Bacteria 1397
257 Ga0496112_0182613 3300048915 Bacteria 2061
258 Ga0496112_0357420 3300048915 Bacteria 1403
259 Ga0501299_010754 3300049522 Bacteria 1534
260 Ga0501031_0141885 3300049568 Unclassified 1570
261 Ga0501033_0066259 3300049570 Bacteria 2656
262 Ga0501034_0020666 3300049571 Bacteria 6724
263 Ga0501039_0026780 3300049575 Unclassified 4431
264 Ga0501039_0072119 3300049575 Bacteria 2684
265 Ga0501040_0001870 3300049576 Bacteria 13494
266 Ga0501040_0059606 3300049576 Bacteria 2623
267 Ga0501041_0008061 3300049577 Bacteria 6199
268 Ga0501041_0018517 3300049577 Unclassified 4149
269 Ga0501042_0020545 3300049578 Bacteria 4597
270 Ga0501042_0118387 3300049578 Bacteria 1907
271 Ga0501048_0030743 3300049582 Bacteria 3886
272 Ga0501067_0113804 3300049583 Unclassified 1504
273 Ga0501068_0116549 3300049584 Unclassified 1664
274 Ga0501069_0079500 3300049585 Bacteria 1846
275 Ga0501071_0020485 3300049587 Bacteria 4597
276 Ga0501072_0145673 3300049588 Bacteria 1888
277 Ga0501075_0063021 3300049591 Bacteria 2795
278 Ga0501075_0169955 3300049591 Unclassified 1663
279 Ga0501075_0320803 3300049591 Bacteria 1180
280 Ga0501076_0007145 3300049592 Bacteria 8115
281 Ga0501076_0043305 3300049592 Bacteria 3546
282 Ga0501076_0053227 3300049592 Bacteria 3207
283 Ga0501079_0100267 3300049741 Bacteria 2245
284 Ga0501079_0118506 3300049741 Bacteria 2058
285 Ga0501080_0254856 3300049742 Bacteria 1600
286 Ga0501080_0476775 3300049742 Bacteria 1117
287 Ga0501081_0004808 3300049743 Bacteria 8677
288 Ga0501081_0039016 3300049743 Bacteria 3248
289 Ga0501081_0154300 3300049743 Unclassified 1651
290 Ga0501045_0003242 3300049824 Bacteria 11110
291 Ga0501045_0053718 3300049824 Unclassified 2944
292 nmdc:mga00v17_28644_c1 3300050491 Bacteria 3263
293 nmdc:mga05p37_200570_c1 3300050507 Bacteria 2417
294 nmdc:mga05p37_214_c1 3300050507 Bacteria 58748
295 nmdc:mga05p37_22410_c1 3300050507 Bacteria 7662
296 nmdc:mga05p37_24451_c1 3300050507 Bacteria 7342
297 nmdc:mga05p37_306824_c1 3300050507 Unclassified 1883
298 nmdc:mga05p37_477822_c1 3300050507 Unclassified 1436
299 nmdc:mga05p37_50167_c1 3300050507 Bacteria 5132
300 nmdc:mga05p37_71223_c1 3300050507 Bacteria 4276
301 nmdc:mga05p37_8347_c1 3300050507 Bacteria 12246
302 nmdc:mga05p37_92303_c1 3300050507 Bacteria 1564
303 nmdc:mga09592_181779_c1 3300050508 Bacteria 1819
304 nmdc:mga09592_227604_c1 3300050508 Bacteria 1615
305 nmdc:mga09592_260406_c1 3300050508 Bacteria 1504
306 nmdc:mga09592_395066_c1 3300050508 Unclassified 1195
307 nmdc:mga09592_68001_c1 3300050508 Bacteria 3022
308 nmdc:mga0qj67_3343_c1 3300050509 Bacteria 11554
309 nmdc:mga0qj67_41384_c1 3300050509 Bacteria 3624
310 nmdc:mga0qj67_61073_c1 3300050509 Bacteria 2992
311 nmdc:mga0qj67_96855_c1 3300050509 Bacteria 2375
312 nmdc:mga06r32_158641_c1 3300050510 Bacteria 2244
313 nmdc:mga06r32_34111_c1 3300050510 Bacteria 4797
314 nmdc:mga06r32_64429_c1 3300050510 Bacteria 3534
315 nmdc:mga08y16_1480_c1 3300050511 Bacteria 23580
316 nmdc:mga08y16_16335_c1 3300050511 Bacteria 7804
317 nmdc:mga08y16_222795_c1 3300050511 Unclassified 1952
318 nmdc:mga08y16_2579_c1 3300050511 Bacteria 18640
319 nmdc:mga08y16_4860_c1 3300050511 Bacteria 14029
320 nmdc:mga08y16_5570_c1 3300050511 Bacteria 13190
321 nmdc:mga08y16_561190_c1 3300050511 Unclassified 1154
322 nmdc:mga08y16_6525_c1 3300050511 Bacteria 12236
323 nmdc:mga0n895_139818_c1 3300050512 Bacteria 2449
324 nmdc:mga0n895_22688_c1 3300050512 Bacteria 5886
325 nmdc:mga0rr50_146417_c1 3300050513 Bacteria 1905
326 nmdc:mga0rr50_210889_c1 3300050513 Unclassified 1600
327 nmdc:mga0rr50_39873_c1 3300050513 Bacteria 3409
328 nmdc:mga0rr50_49104_c1 3300050513 Bacteria 3123
329 nmdc:mga0a205_15058_c1 3300050515 Bacteria 7220
330 nmdc:mga0a205_261506_c1 3300050515 Unclassified 1608
331 nmdc:mga0a205_8847_c1 3300050515 Bacteria 9174
332 Ga0501084_0155501 3300054114 Unclassified 1928
333 Ga0501084_0197432 3300054114 Bacteria 1698
334 Ga0590077_000845 3300059426 Bacteria 7874
335 Ga0501082_0129893 3300060353 Bacteria 2186
336 Ga0530510_0015011 3300061734 Bacteria 5471
337 Ga0530510_0017574 3300061734 Bacteria 5069
338 Ga0530510_0089383 3300061734 Bacteria 2246
339 Ga0495642_0016563
340 MBSR1b_contig_4531297
341 JGI24751J29686_10020283
342 Ga0065712_10001060
343 Ga0065712_10163954
344 Ga0065715_10005914
345 Ga0065715_10177250
346 Ga0065715_10187750
347 Ga0070683_100019014
348 Ga0070683_100069500
349 Ga0070690_100018228
350 Ga0070670_100205600
351 Ga0070670_100249400
352 Ga0070666_10031787
353 Ga0070680_100102303
354 Ga0070680_100153010
355 Ga0068868_100041502
356 Ga0070689_100007303
357 Ga0070689_100018997
358 Ga0070661_100010713
359 Ga0070661_100145150
360 Ga0070692_10033904
361 Ga0070668_100037155
362 Ga0070669_100006364
363 Ga0070675_100000943
364 Ga0070675_100031234
365 Ga0070671_100035131
366 Ga0070673_100035031
367 Ga0070673_100160039
368 Ga0070688_100012274
369 Ga0070688_100015407
370 Ga0070688_100092205
371 Ga0070711_100186413
372 Ga0070705_100022414
373 Ga0070705_100028056
374 Ga0070705_100093564
375 Ga0070705_100113153
376 Ga0070700_100010214
377 Ga0070694_100001099
378 Ga0070708_100152322
379 Ga0070681_10003487
380 Ga0070681_10023854
381 Ga0070681_10224459
382 Ga0068867_100002647
383 Ga0068867_100389860
384 Ga0070706_100134820
385 Ga0070707_100034930
386 Ga0070707_100155852
387 Ga0070707_100374128
388 Ga0070707_100391753
389 Ga0070698_100002109
390 Ga0070698_100015946
391 Ga0070698_100097138
392 Ga0070699_100000499
393 Ga0070699_100008186
394 Ga0070699_100010870
395 Ga0070699_100024276
396 Ga0070679_100041927
397 Ga0070697_100041632
398 Ga0070697_100054438
399 Ga0070697_100222275
400 Ga0070672_100010909
401 Ga0070686_100055653
402 Ga0070686_100144262
403 Ga0070695_100000449
404 Ga0070696_100011053
405 Ga0070696_100014486
406 Ga0070696_100044099
407 Ga0070665_100002710
408 Ga0070665_100184991
409 Ga0070704_100001784
410 Ga0070704_100005504
411 Ga0068855_100462480
412 Ga0070702_100025033
413 Ga0068859_100001625
414 Ga0068859_100004974
415 Ga0068859_100013736
416 Ga0068859_100207935
417 Ga0068864_100008371
418 Ga0068864_100055535
419 Ga0068864_100105298
420 Ga0068861_100380678
421 Ga0068870_10026198
422 Ga0068870_10028821
423 Ga0068870_10103395
424 Ga0068863_100062670
425 Ga0068863_100099842
426 Ga0068858_100029183
427 Ga0068858_100074180
428 Ga0068862_100001404
429 Ga0068862_100485638
430 Ga0075368_10080180
431 Ga0075364_10083989
432 Ga0070712_100212300
433 Ga0097621_100183144
434 Ga0097621_100336996
435 Ga0075428_100000563
436 Ga0075428_100006130
437 Ga0075428_100007160
438 Ga0075428_100019089
439 Ga0075428_100093794
440 Ga0075428_100352240
441 Ga0075430_100001235
442 Ga0075430_100013106
443 Ga0075430_100043442
444 Ga0075430_100169587
445 Ga0075430_100232326
446 Ga0075431_100044124
447 Ga0075431_100045888
448 Ga0075431_100084158
449 Ga0075431_100096334
450 Ga0075433_10041819
451 Ga0075433_10056318
452 Ga0075434_100006038
453 Ga0075434_100143622
454 Ga0075434_100181665
455 Ga0075429_100002422
456 Ga0075429_100012661
457 Ga0075429_100014274
458 Ga0075429_100082464
459 Ga0075429_100085548
460 Ga0075429_100482003
461 Ga0097620_100001625
462 Ga0097620_100004974
463 Ga0097620_100013736
464 Ga0097620_100207937
465 Ga0075435_100020440
466 Ga0075435_100027661
467 Ga0075435_100038741
468 Ga0075435_100058298
469 Ga0075435_100247538
470 Ga0111539_10000037
471 Ga0111539_10000262
472 Ga0111539_10003722
473 Ga0111539_10006769
474 Ga0111539_10006803
475 Ga0111539_10008716
476 Ga0111539_10010211
477 Ga0111539_10153003
478 Ga0111539_10171859
479 Ga0111539_10388494
480 Ga0105245_10006383
481 Ga0105247_10006853
482 Ga0114129_10000019
483 Ga0114129_10000827
484 Ga0114129_10001032
485 Ga0114129_10022927
486 Ga0114129_10036786
487 Ga0114129_10043707
488 Ga0114129_10060162
489 Ga0114129_10145735
490 Ga0114129_10233504
491 Ga0114129_10334334
492 Ga0105243_10081073
493 Ga0105242_10016718
494 Ga0105238_10187217
495 Ga0157374_10013781
496 Ga0157375_10001240
497 Ga0157375_10106695
498 Ga0157380_10075079
499 Ga0157380_10089209
500 Ga0157377_10038891
501 Ga0157377_10044185
502 Ga0157379_10109983
503 Ga0157379_10119935
504 Ga0157379_10213827
505 Ga0157376_10056886
506 Ga0163161_10130445
507 Ga0207643_10009791
508 Ga0207643_10032464
509 Ga0207643_10047129
510 Ga0207707_10029062
511 Ga0207707_10033889
512 Ga0207663_10147413
513 Ga0207660_10121564
514 Ga0207660_10313678
515 Ga0207660_10357104
516 Ga0207662_10062236
517 Ga0207646_10152611
518 Ga0207681_10000855
519 Ga0207681_10142566
520 Ga0207650_10072201
521 Ga0207650_10182068
522 Ga0207659_10001690
523 Ga0207659_10216516
524 Ga0207659_10309971
525 Ga0207659_10391523
526 Ga0207644_10028762
527 Ga0207670_10002817
528 Ga0207669_10182021
529 Ga0207691_10025513
530 Ga0207711_10084848
531 Ga0207651_10130752
532 Ga0207651_10170027
533 Ga0207651_10192690
534 Ga0207651_10330576
535 Ga0207651_10360173
536 Ga0207668_10084612
537 Ga0207677_10046642
538 Ga0207703_10033316
539 Ga0207703_10163434
540 Ga0207639_10189897
541 Ga0207678_10047779
542 Ga0207708_10003200
543 Ga0207648_10001246
544 Ga0207648_10296750
545 Ga0207676_10002646
546 Ga0207676_10084456
547 Ga0207676_10160303
548 Ga0207674_10087220
549 Ga0207675_100002358
550 Ga0207428_10000608
551 Ga0207428_10001026
552 Ga0207428_10004063
553 Ga0207428_10005268
554 Ga0207428_10046036
555 Ga0207428_10070283
556 Ga0268266_10004990
557 Ga0268265_10000420
558 Ga0268264_10028750
559 Ga0307405_10034214
560 Ga0307406_10116193
561 Ga0307412_10028857
562 Ga0307412_10147690
563 Ga0307416_100021428
564 Ga0307416_100551940
565 Ga0307411_10029088
566 Ga0307411_10153173
567 Ga0307415_100052371
568 Ga0307415_100110538
569 Ga0373937_0117815
570 Ga0439450_001047
571 Ga0439464_0008240
572 Ga0451577_0135333
573 Ga0451576_0045834
574 Ga0495603_0042824
575 Ga0495603_0054539
576 Ga0495629_0069267
577 Ga0495582_0137785
578 Ga0495585_0079850
579 Ga0495594_0012754
580 Ga0495586_0178013
581 Ga0495598_0033742
582 Ga0495609_0066715
583 Ga0495621_0003235
584 Ga0495621_0004611
585 Ga0495633_0023296
586 Ga0495659_0003994
587 Ga0495659_0007961
588 Ga0495659_0031490
589 Ga0495588_0002317
590 Ga0495657_0128014
591 Ga0495669_0020099
592 Ga0495670_0017245
593 Ga0496104_0029668
594 Ga0496109_0349366
595 Ga0496112_0182613
596 Ga0496112_0357420
597 Ga0501299_010754
598 Ga0501031_0141885
599 Ga0501033_0066259
600 Ga0501034_0020666
601 Ga0501039_0026780
602 Ga0501039_0072119
603 Ga0501040_0001870
604 Ga0501040_0059606
605 Ga0501041_0008061
606 Ga0501041_0018517
607 Ga0501042_0020545
608 Ga0501042_0118387
609 Ga0501048_0030743
610 Ga0501067_0113804
611 Ga0501068_0116549
612 Ga0501069_0079500
613 Ga0501071_0020485
614 Ga0501072_0145673
615 Ga0501075_0063021
616 Ga0501075_0169955
617 Ga0501075_0320803
618 Ga0501076_0007145
619 Ga0501076_0043305
620 Ga0501076_0053227
621 Ga0501079_0100267
622 Ga0501079_0118506
623 Ga0501080_0254856
624 Ga0501080_0476775
625 Ga0501081_0004808
626 Ga0501081_0039016
627 Ga0501081_0154300
628 Ga0501045_0003242
629 Ga0501045_0053718
630 nmdc:mga00v17_28644_c1
631 nmdc:mga05p37_200570_c1
632 nmdc:mga05p37_214_c1
633 nmdc:mga05p37_22410_c1
634 nmdc:mga05p37_24451_c1
635 nmdc:mga05p37_306824_c1
636 nmdc:mga05p37_477822_c1
637 nmdc:mga05p37_50167_c1
638 nmdc:mga05p37_71223_c1
639 nmdc:mga05p37_8347_c1
640 nmdc:mga05p37_92303_c1
641 nmdc:mga09592_181779_c1
642 nmdc:mga09592_227604_c1
643 nmdc:mga09592_260406_c1
644 nmdc:mga09592_395066_c1
645 nmdc:mga09592_68001_c1
646 nmdc:mga0qj67_3343_c1
647 nmdc:mga0qj67_41384_c1
648 nmdc:mga0qj67_61073_c1
649 nmdc:mga0qj67_96855_c1
650 nmdc:mga06r32_158641_c1
651 nmdc:mga06r32_34111_c1
652 nmdc:mga06r32_64429_c1
653 nmdc:mga08y16_1480_c1
654 nmdc:mga08y16_16335_c1
655 nmdc:mga08y16_222795_c1
656 nmdc:mga08y16_2579_c1
657 nmdc:mga08y16_4860_c1
658 nmdc:mga08y16_5570_c1
659 nmdc:mga08y16_561190_c1
660 nmdc:mga08y16_6525_c1
661 nmdc:mga0n895_139818_c1
662 nmdc:mga0n895_22688_c1
663 nmdc:mga0rr50_146417_c1
664 nmdc:mga0rr50_210889_c1
665 nmdc:mga0rr50_39873_c1
666 nmdc:mga0rr50_49104_c1
667 nmdc:mga0a205_15058_c1
668 nmdc:mga0a205_261506_c1
669 nmdc:mga0a205_8847_c1
670 Ga0501084_0155501
671 Ga0501084_0197432
672 Ga0590077_000845
673 Ga0501082_0129893
674 Ga0530510_0015011
675 Ga0530510_0017574
676 Ga0530510_0089383

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13177

DNA_pol3_delta2

DNA polymerase III, delta subunit

103

221

0.95

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

59

220

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.8333 3 217
2chg-assembly3.cif.gz_C replication factor c domains 1 and 2 0.7591 3 218
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.7459 3 217
1sxj-assembly1.cif.gz_B crystal structure of the eukaryotic clamp loader (replication factor c, rfc) bound to the dna sliding clamp (proliferating cell nuclear antigen, pcna) 0.7347 3 334
8euf-assembly1.cif.gz_T class2 of the ino80-nucleosome complex 0.7344 117 210
ID Description Score Start End Superfamily
af_Q2G2X1_1_121_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9168 40 173 3.40.50.300
3gliB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9094 2 173 3.40.50.300
af_Q2G2X1_1_121_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9024 40 173 3.40.50.300
1xxhJ01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8962 11 169 3.40.50.300
af_O64728_443_623_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8788 3 170 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3C1BVL6-F1-model_v4 DNA polymerase III subunit gamma/tau 0.9513 95 170 GO:0006261
AF-A0A352NGR5-F1-model_v4 DNA polymerase III subunit delta 0.9426 72 170 GO:0006261
GO:0016740
AF-A0A537YA41-F1-model_v4 DNA polymerase III subunit delta (EC 2.7.7.7) 0.9352 3 185 GO:0003887
GO:0005524
GO:0006261
GO:0008408
GO:0016887
AF-A0A3N5J204-F1-model_v4 DNA polymerase III subunit delta (EC 2.7.7.7) 0.935 1 214 GO:0003887
GO:0006261
GO:0008408
AF-A0A525W363-F1-model_v4 DNA polymerase III subunit delta (EC 2.7.7.7) 0.9261 1 171 GO:0000049
GO:0003887
GO:0006261
GO:0008408

Map