F412357

General Info

Members Datasets Scaffolds Average Seq Length
335 215 670 222

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0000266|Ga0466963_0000266_18287_19075
Length 248
Sequence MSPRSASVNEELRRRSRERLLYAAVELVAERGYDSTTLADIADRAGSARGLVSYYFPSKRQLLQSAVHRLMHRTLEEGLERAPATDDGHERMARAIDAVLGLTRDHPVLMRQHMAGILQAEGFVQCPEQQRLAQLLRETVVRNGSDRPDQDYPMLRALLMGAVYAALVPGAPMPLPVLRAELFRRYGLAWEQGMPPETDASAGAHGAHGKDLSRFFATEDRDGARGEPTGQPGRPSPEGTRGGARLEP

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
11 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
12 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
13 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
14 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
15 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
16 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
17 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
18 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
19 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
20 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
21 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
22 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
23 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
24 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
25 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
30 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
31 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
32 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
33 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
34 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
35 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
36 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
37 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
38 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
39 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
40 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
41 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
42 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
43 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
44 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
45 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
46 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
47 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
48 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
49 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
50 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
51 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
52 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
53 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
54 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
55 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
56 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
57 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
58 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
59 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
60 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
61 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
62 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
63 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
67 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
70 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
71 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
72 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
73 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
76 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
79 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
80 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
81 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
82 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
85 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
89 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
90 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
91 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
92 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
93 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
94 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
95 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
98 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
99 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
100 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
104 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
105 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
106 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
110 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
111 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
112 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
117 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
118 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
119 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
120 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
121 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
122 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
123 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
126 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
155 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
156 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
157 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
158 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
161 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
162 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
163 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
164 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
165 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
166 2643221647 Streptomyces sp. Root369 Isolate Unclassified
167 2643221670 Streptomyces sp. Root431 Isolate Unclassified
168 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
169 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
170 2643221714 Streptomyces sp. Root264 Isolate Unclassified
171 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
172 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
173 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
174 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
175 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
176 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
177 2808606448 Streptomyces sp. 193411 Isolate Unclassified
178 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
179 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
180 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
181 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
182 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
183 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
184 2867428634 Streptomyces sp. RP5T Isolate Unclassified
185 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
186 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
187 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
188 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
189 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
190 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
191 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
192 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
193 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
194 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
195 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
196 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
197 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
198 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
199 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
200 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
201 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
202 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
203 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
204 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
205 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
206 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
207 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
208 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
209 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
210 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
211 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
212 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
213 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
214 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
215 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.58
Metatranscriptomes 0
Isolates 16.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.67
Nodule 0.3
Rhizoplane 1.19
Rhizosphere 75.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0000266 3300044694 Bacteria 23069
2 rootH1_10049058 3300003316 Bacteria 2092
3 rootH2_10086849 3300003320 Bacteria 1545
4 rootL2_10007972 3300003322 Bacteria 2338
5 rootL2_10049158 3300003322 Bacteria 3786
6 rootH1_10037327 3300003323 Bacteria 4986
7 rootH1_10037328 3300003323 Bacteria 1522
8 rootH1_10048692 3300003323 Bacteria 3738
9 JGI25160J50197_1006771 3300003354 Bacteria 4595
10 Ga0068854_100723808 3300005578 Bacteria 861
11 Ga0068856_100633422 3300005614 Bacteria 1090
12 Ga0081455_10131206 3300005937 Bacteria 1959
13 Ga0075368_10010669 3300006042 Bacteria 3326
14 Ga0075363_100199438 3300006048 Bacteria 1143
15 Ga0075367_10003130 3300006178 Bacteria 7789
16 Ga0075370_10165286 3300006353 Bacteria 1300
17 Ga0099826_10034309 3300006948 Bacteria 3626
18 Ga0105250_10032945 3300009092 Bacteria 2080
19 Ga0105238_10141694 3300009551 Bacteria 2381
20 Ga0105239_10429701 3300010375 Bacteria 1497
21 Ga0157375_11012978 3300013308 Bacteria 970
22 Ga0182008_10007198 3300014497 Bacteria 6158
23 Ga0182007_10006960 3300015262 Bacteria 4801
24 Ga0182005_1022247 3300015265 Bacteria 1737
25 Ga0183367_1003 3300015688 Bacteria 814276
26 Ga0209758_1013855 3300025297 Bacteria 4349
27 Ga0207426_1000885 3300025302 Bacteria 30850
28 Ga0207647_10108285 3300025904 Bacteria 1644
29 Ga0207694_10248536 3300025924 Bacteria 1455
30 Ga0207690_10707445 3300025932 Bacteria 829
31 Ga0207640_10318672 3300025981 Bacteria 1237
32 Ga0209813_10004177 3300027866 Bacteria 3431
33 Ga0307517_10014827 3300028786 Bacteria 10420
34 Ga0307515_10000633 3300028794 Bacteria 81559
35 Ga0307515_10054462 3300028794 Bacteria 5872
36 Ga0307511_10000229 3300030521 Bacteria 57050
37 Ga0307511_10039501 3300030521 Bacteria 4031
38 Ga0307512_10001476 3300030522 Bacteria 33144
39 Ga0307512_10038445 3300030522 Bacteria 4024
40 Ga0307509_10015421 3300031507 Bacteria 8913
41 Ga0307509_10080316 3300031507 Bacteria 3373
42 Ga0307508_10010966 3300031616 Bacteria 8287
43 Ga0307508_10022510 3300031616 Bacteria 5728
44 Ga0307508_10064933 3300031616 Bacteria 3217
45 Ga0307508_10127946 3300031616 Bacteria 2143
46 Ga0307514_10005510 3300031649 Bacteria 11250
47 Ga0307514_10091862 3300031649 Bacteria 2209
48 Ga0307514_10206689 3300031649 Bacteria 1225
49 Ga0307516_10011857 3300031730 Bacteria 9435
50 Ga0307516_10013467 3300031730 Bacteria 8709
51 Ga0307516_10046622 3300031730 Bacteria 4275
52 Ga0307516_10353503 3300031730 Bacteria 1135
53 Ga0307518_10079090 3300031838 Bacteria 2375
54 Ga0307518_10099609 3300031838 Bacteria 2082
55 Ga0307507_10007275 3300033179 Bacteria 16217
56 Ga0307507_10011225 3300033179 Bacteria 11360
57 Ga0307507_10172215 3300033179 Bacteria 1570
58 Ga0307510_10020477 3300033180 Bacteria 7726
59 Ga0395900_0143404 3300037418 Bacteria 2445
60 Ga0395898_0005345 3300037466 Bacteria 13888
61 Ga0395898_0056734 3300037466 Bacteria 3817
62 Ga0395898_0098961 3300037466 Bacteria 2800
63 Ga0395898_0322833 3300037466 Bacteria 1473
64 Ga0395905_0903194 3300037471 Bacteria 786
65 Ga0436364_0380054 3300037853 Bacteria 24964
66 Ga0395901_0024259 3300038443 Bacteria 6223
67 Ga0439436_0003339 3300041404 Bacteria 4870
68 Ga0451807_0227220 3300041486 Bacteria 942
69 Ga0451833_0024043 3300041491 Bacteria 1621
70 Ga0451837_0955691 3300041494 Bacteria 4152
71 Ga0451853_0207336 3300041512 Bacteria 1334
72 Ga0439433_0009877 3300041999 Bacteria 2083
73 Ga0439448_0014776 3300042005 Bacteria 2358
74 Ga0439432_023765 3300042006 Bacteria 2017
75 Ga0439449_0002517 3300042007 Bacteria 7158
76 Ga0439449_0010308 3300042007 Bacteria 3527
77 Ga0439457_001269 3300042014 Bacteria 7577
78 Ga0439457_003873 3300042014 Bacteria 4009
79 Ga0439462_0019980 3300042015 Bacteria 1745
80 Ga0450903_000265 3300042138 Bacteria 11514
81 Ga0439458_0004347 3300042157 Bacteria 3259
82 Ga0466969_0195282 3300044656 Bacteria 924
83 Ga0466972_0012889 3300044658 Bacteria 4198
84 Ga0466972_0017015 3300044658 Bacteria 3637
85 Ga0466972_0087570 3300044658 Bacteria 1479
86 Ga0466972_0132804 3300044658 Bacteria 1172
87 Ga0466972_0238172 3300044658 Bacteria 851
88 Ga0466965_0001600 3300044683 Bacteria 9243
89 Ga0466965_0035517 3300044683 Bacteria 2442
90 Ga0466965_0053149 3300044683 Bacteria 2013
91 Ga0466965_0098020 3300044683 Bacteria 1497
92 Ga0466966_0101192 3300044684 Bacteria 1782
93 Ga0466966_0167420 3300044684 Bacteria 1336
94 Ga0466961_0074835 3300044693 Bacteria 2147
95 Ga0466961_0143991 3300044693 Bacteria 1491
96 Ga0466963_0000924 3300044694 Bacteria 14981
97 Ga0466970_0004160 3300044765 Bacteria 7122
98 Ga0466970_0010015 3300044765 Bacteria 4801
99 Ga0466957_0002411 3300044842 Bacteria 10037
100 Ga0466959_0000407 3300045049 Bacteria 25154
101 Ga0466958_0017783 3300045836 Bacteria 4116
102 Ga0466967_0122991 3300045976 Bacteria 2400
103 Ga0466967_0188475 3300045976 Bacteria 1948
104 Ga0466967_0271220 3300045976 Bacteria 1626
105 Ga0495617_014395 3300046452 Bacteria 2688
106 Ga0495592_0061899 3300046454 Bacteria 2749
107 Ga0495603_0008147 3300046455 Bacteria 6331
108 Ga0495603_0073113 3300046455 Bacteria 2014
109 Ga0495629_0003411 3300046459 Bacteria 12025
110 Ga0495629_0007096 3300046459 Bacteria 8253
111 Ga0495629_0078296 3300046459 Bacteria 2308
112 Ga0495629_0388395 3300046459 Bacteria 949
113 Ga0495629_0416168 3300046459 Bacteria 912
114 Ga0495638_0017167 3300046460 Bacteria 4833
115 Ga0495638_0313510 3300046460 Bacteria 841
116 Ga0495651_0008209 3300046462 Bacteria 8003
117 Ga0495605_0014269 3300046474 Bacteria 4355
118 Ga0495662_0000672 3300046476 Bacteria 16156
119 Ga0495662_0006384 3300046476 Bacteria 5892
120 Ga0495664_0000531 3300046477 Bacteria 19160
121 Ga0495585_0035564 3300046492 Bacteria 2813
122 Ga0495585_0193279 3300046492 Bacteria 1040
123 Ga0495594_0019666 3300046499 Bacteria 3591
124 Ga0495594_0034479 3300046499 Bacteria 2753
125 Ga0495594_0054917 3300046499 Bacteria 2195
126 Ga0495594_0087935 3300046499 Bacteria 1739
127 Ga0495594_0247777 3300046499 Bacteria 1015
128 Ga0495607_0086992 3300046501 Bacteria 1702
129 Ga0495583_0131969 3300046506 Bacteria 1044
130 Ga0495606_0005812 3300046507 Bacteria 11638
131 Ga0495608_0187980 3300046511 Bacteria 1305
132 Ga0495616_0025381 3300046513 Bacteria 3167
133 Ga0495620_0014327 3300046515 Bacteria 4032
134 Ga0495628_0152170 3300046516 Bacteria 1761
135 Ga0495630_0229728 3300046517 Bacteria 1417
136 Ga0495631_0012555 3300046518 Bacteria 4133
137 Ga0495631_0094924 3300046518 Bacteria 1284
138 Ga0495643_0020004 3300046522 Bacteria 3866
139 Ga0495648_0027624 3300046524 Bacteria 3795
140 Ga0495648_0033703 3300046524 Bacteria 3342
141 Ga0495666_0080672 3300046526 Bacteria 1539
142 Ga0495666_0096087 3300046526 Bacteria 1397
143 Ga0495640_0048084 3300046533 Bacteria 2949
144 Ga0495640_0240535 3300046533 Bacteria 1136
145 Ga0495586_0187405 3300046535 Bacteria 1171
146 Ga0495587_0001605 3300046536 Bacteria 15036
147 Ga0495597_0022779 3300046542 Bacteria 2902
148 Ga0495597_0125881 3300046542 Bacteria 1065
149 Ga0495645_0015583 3300046543 Bacteria 5408
150 Ga0495622_0018498 3300046557 Bacteria 3246
151 Ga0495622_0019596 3300046557 Bacteria 3149
152 Ga0495667_0218118 3300046559 Bacteria 1218
153 Ga0495668_0009440 3300046616 Bacteria 5993
154 Ga0495668_0100975 3300046616 Bacteria 1578
155 Ga0495634_0089005 3300046642 Bacteria 2007
156 Ga0495634_0388146 3300046642 Bacteria 831
157 Ga0495625_0005521 3300046660 Bacteria 11494
158 Ga0495625_0217187 3300046660 Bacteria 1254
159 Ga0495635_0001686 3300046663 Bacteria 14868
160 Ga0495635_0182441 3300046663 Bacteria 1426
161 Ga0495588_0000456 3300046674 Bacteria 20551
162 Ga0495588_0032449 3300046674 Bacteria 2632
163 Ga0495657_0010685 3300046675 Bacteria 6902
164 Ga0495657_0033928 3300046675 Bacteria 3548
165 Ga0495623_0275930 3300046679 Bacteria 937
166 Ga0495623_0320425 3300046679 Bacteria 851
167 Ga0495646_0003292 3300046680 Bacteria 10058
168 Ga0495646_0260932 3300046680 Bacteria 926
169 Ga0495613_0000687 3300046689 Bacteria 26727
170 Ga0495613_0001816 3300046689 Bacteria 16221
171 Ga0495613_0004172 3300046689 Bacteria 10816
172 Ga0495613_0009882 3300046689 Bacteria 7093
173 Ga0495613_0145771 3300046689 Bacteria 1689
174 Ga0495613_0290520 3300046689 Bacteria 1133
175 Ga0495624_0071631 3300046690 Bacteria 2156
176 Ga0495624_0092063 3300046690 Bacteria 1870
177 Ga0495624_0267135 3300046690 Bacteria 1033
178 Ga0495671_0071648 3300046692 Bacteria 1702
179 Ga0495649_0083774 3300046694 Bacteria 1703
180 Ga0495589_0012456 3300046794 Bacteria 4403
181 Ga0495589_0016004 3300046794 Bacteria 3855
182 Ga0495589_0249578 3300046794 Bacteria 829
183 Ga0495581_0040624 3300047315 Bacteria 2691
184 Ga0495581_0142881 3300047315 Bacteria 1396
185 Ga0495604_0000486 3300047317 Bacteria 34884
186 Ga0495604_0021233 3300047317 Bacteria 5183
187 Ga0495604_0358918 3300047317 Bacteria 967
188 Ga0495636_0000378 3300047318 Bacteria 16752
189 Ga0495636_0000480 3300047318 Bacteria 14707
190 Ga0495636_0062679 3300047318 Bacteria 1574
191 Ga0495636_0105553 3300047318 Bacteria 1235
192 Ga0495674_0065324 3300047319 Bacteria 3161
193 Ga0495674_0071717 3300047319 Bacteria 2989
194 Ga0495672_0080951 3300047320 Bacteria 1810
195 Ga0495676_0016402 3300047321 Bacteria 6577
196 Ga0495676_0095651 3300047321 Bacteria 2209
197 Ga0495680_0025907 3300047322 Bacteria 4846
198 Ga0495687_001872 3300047443 Bacteria 18211
199 Ga0495687_002310 3300047443 Bacteria 15565
200 Ga0495687_071200 3300047443 Bacteria 1393
201 Ga0495687_078384 3300047443 Bacteria 1301
202 Ga0495687_104170 3300047443 Bacteria 1057
203 Ga0495675_0043736 3300047444 Bacteria 2853
204 Ga0495675_0112394 3300047444 Bacteria 1700
205 Ga0495675_0186800 3300047444 Bacteria 1267
206 Ga0495685_000580 3300047447 Bacteria 11275
207 Ga0495685_010363 3300047447 Bacteria 3124
208 Ga0495685_058757 3300047447 Bacteria 1298
209 Ga0495685_138927 3300047447 Bacteria 792
210 Ga0495681_0005733 3300047470 Bacteria 8259
211 Ga0495681_0129146 3300047470 Bacteria 1077
212 Ga0495681_0174007 3300047470 Bacteria 889
213 Ga0495593_0001735 3300047673 Bacteria 12919
214 Ga0495593_0039004 3300047673 Bacteria 2563
215 Ga0495602_0069441 3300048088 Bacteria 3020
216 Ga0495614_0003747 3300048089 Bacteria 6835
217 Ga0495626_0021157 3300048091 Bacteria 3231
218 Ga0496108_0090968 3300048911 Bacteria 2594
219 Ga0496109_0060869 3300048912 Bacteria 3451
220 Ga0496113_0281839 3300048916 Bacteria 1329
221 Ga0501031_0040916 3300049568 Bacteria 3025
222 Ga0501032_0034430 3300049569 Bacteria 3468
223 Ga0501032_0431798 3300049569 Bacteria 845
224 Ga0501033_0000804 3300049570 Bacteria 28723
225 Ga0501033_0003240 3300049570 Bacteria 13468
226 Ga0501033_0029681 3300049570 Bacteria 4109
227 Ga0501033_0141894 3300049570 Bacteria 1736
228 Ga0501034_0006262 3300049571 Bacteria 12804
229 Ga0501034_0039799 3300049571 Bacteria 4760
230 Ga0501034_0612804 3300049571 Bacteria 993
231 Ga0501036_0014218 3300049572 Bacteria 6622
232 Ga0501036_0041884 3300049572 Bacteria 3875
233 Ga0501036_0442874 3300049572 Bacteria 1082
234 Ga0501037_0027741 3300049573 Bacteria 4184
235 Ga0501038_0003306 3300049574 Bacteria 15029
236 Ga0501038_0355849 3300049574 Bacteria 1139
237 Ga0501038_0448148 3300049574 Bacteria 993
238 Ga0501039_0004258 3300049575 Bacteria 10774
239 Ga0501039_0352134 3300049575 Bacteria 1157
240 Ga0501039_0421994 3300049575 Bacteria 1048
241 Ga0501043_0008989 3300049579 Bacteria 7861
242 Ga0501043_0493687 3300049579 Bacteria 915
243 Ga0501046_0007115 3300049580 Bacteria 9844
244 Ga0501046_0082174 3300049580 Bacteria 2488
245 Ga0501047_0075160 3300049581 Bacteria 3251
246 Ga0501047_0410163 3300049581 Bacteria 1187
247 Ga0501047_0565673 3300049581 Bacteria 960
248 Ga0501048_0036863 3300049582 Bacteria 3513
249 Ga0501068_0240894 3300049584 Bacteria 1151
250 Ga0501070_0005046 3300049586 Bacteria 11258
251 Ga0501070_0331518 3300049586 Bacteria 1237
252 Ga0501070_0413598 3300049586 Bacteria 1090
253 Ga0501070_0475706 3300049586 Bacteria 1005
254 Ga0501073_0171106 3300049589 Bacteria 1503
255 Ga0501074_0002394 3300049590 Bacteria 13081
256 Ga0501080_0124564 3300049742 Bacteria 2387
257 Ga0501035_0012915 3300049822 Bacteria 7708
258 Ga0501035_0069896 3300049822 Bacteria 3111
259 Ga0501035_0442880 3300049822 Bacteria 1075
260 Ga0501044_0006947 3300049823 Bacteria 12457
261 Ga0501044_0020592 3300049823 Bacteria 7040
262 Ga0501044_0039260 3300049823 Bacteria 4939
263 Ga0501044_0051897 3300049823 Bacteria 4228
264 Ga0501044_0729684 3300049823 Bacteria 874
265 Ga0501045_0362666 3300049824 Bacteria 1078
266 nmdc:mga03n38_184530_c1 3300050490 Bacteria 1071
267 nmdc:mga03n38_224550_c1 3300050490 Bacteria 982
268 nmdc:mga03n38_58088_c1 3300050490 Bacteria 1751
269 nmdc:mga06z11_1510_c1 3300050494 Bacteria 8634
270 nmdc:mga06z11_435631_c1 3300050494 Bacteria 791
271 nmdc:mga04h51_2299_c1 3300050495 Bacteria 4516
272 nmdc:mga07m45_183458_c1 3300050496 Bacteria 1217
273 Ga0495619_0011486 3300053085 Bacteria 5583
274 Ga0500640_130025 3300053095 Bacteria 994
275 Ga0500618_038587 3300053125 Bacteria 1102
276 Ga0500600_0185575 3300053149 Bacteria 996
277 Ga0500636_0077173 3300053177 Bacteria 1925
278 Ga0501082_0602932 3300060353 Bacteria 961
279 Ga0466962_0000216 3300061719 Bacteria 23942
280 Ga0466962_0085128 3300061719 Bacteria 1513
281 2547408963 2547132111 Bacteria 8013147
282 2585306518 2582581313 Bacteria 10042643
283 2585320051 2582581314 Bacteria 11452267
284 2616693285 2616644814 Bacteria 11555299
285 2643947415 2643221587 Bacteria 7586415
286 2644263357 2643221647 Bacteria 10741251
287 2644386147 2643221670 Bacteria 6497041
288 2644433114 2643221677 Bacteria 7584031
289 2644442079 2643221678 Bacteria 9540101
290 2644631676 2643221714 Bacteria 9015452
291 2784586354 2784132148 Bacteria 8627943
292 2785346453 2784746763 Bacteria 9783172
293 2785366610 2784746768 Bacteria 10036182
294 2786667688 2786546132 Bacteria 10419719
295 2808847149 2808606359 Bacteria 9866990
296 2808917956 2808606375 Bacteria 9466072
297 2809229854 2808606448 Bacteria 8656184
298 2811846685 2808606982 Bacteria 7791042
299 2812360811 2811994879 Bacteria 9313447
300 2812482738 2811994917 Bacteria 7761064
301 2852639454 2852635781 Bacteria 8251373
302 2862290150 2862281513 Bacteria 9621493
303 2862293056 2862290372 Bacteria 7471434
304 2867435063 2867428634 Bacteria 9590268
305 2873157905 2873151551 Bacteria 8625867
306 2877683940 2877676314 Bacteria 9512378
307 2912723132 2912715099 Bacteria 9460473
308 2912726599 2912723979 Bacteria 8557534
309 2918502162 2918501144 Bacteria 8668083
310 2919469985 2919468124 Bacteria 9133025
311 2946065059 2946064051 Bacteria 8957905
312 2946073491 2946072368 Bacteria 8999607
313 2947232376 2947224130 Bacteria 9938529
314 2954389236 2954380949 Bacteria 10050426
315 2954673828 2954673503 Bacteria 9685905
316 2954690164 2954682443 Bacteria 9862841
317 2954700011 2954691527 Bacteria 10720516
318 2954702207 2954701450 Bacteria 10834262
319 2954718839 2954711539 Bacteria 10867210
320 2954728808 2954721474 Bacteria 10456478
321 2954733003 2954731030 Bacteria 10243860
322 2954747708 2954740390 Bacteria 10229294
323 2954751883 2954749733 Bacteria 10366972
324 2954766830 2954759201 Bacteria 9358192
325 3006394411 3006393351 Bacteria 6615579
326 3006428508 3006425503 Bacteria 6491253
327 3006486739 3006486233 Bacteria 8157040
328 3006496967 3006493962 Bacteria 8825450
329 8008581152 8008574985 Bacteria 7815457
330 8023626077 8023623736 Bacteria 8593882
331 8025484271 8025478263 Bacteria 8209203
332 8048407287 8048406513 Bacteria 8936924
333 8056451943 8056447290 Bacteria 7680491
334 8056670310 8056667051 Bacteria 6953971
335 8056832743 8056829672 Bacteria 9045328
336 Ga0466963_0000266
337 rootH1_10049058
338 rootH2_10086849
339 rootL2_10007972
340 rootL2_10049158
341 rootH1_10037327
342 rootH1_10037328
343 rootH1_10048692
344 JGI25160J50197_1006771
345 Ga0068854_100723808
346 Ga0068856_100633422
347 Ga0081455_10131206
348 Ga0075368_10010669
349 Ga0075363_100199438
350 Ga0075367_10003130
351 Ga0075370_10165286
352 Ga0099826_10034309
353 Ga0105250_10032945
354 Ga0105238_10141694
355 Ga0105239_10429701
356 Ga0157375_11012978
357 Ga0182008_10007198
358 Ga0182007_10006960
359 Ga0182005_1022247
360 Ga0183367_1003
361 Ga0209758_1013855
362 Ga0207426_1000885
363 Ga0207647_10108285
364 Ga0207694_10248536
365 Ga0207690_10707445
366 Ga0207640_10318672
367 Ga0209813_10004177
368 Ga0307517_10014827
369 Ga0307515_10000633
370 Ga0307515_10054462
371 Ga0307511_10000229
372 Ga0307511_10039501
373 Ga0307512_10001476
374 Ga0307512_10038445
375 Ga0307509_10015421
376 Ga0307509_10080316
377 Ga0307508_10010966
378 Ga0307508_10022510
379 Ga0307508_10064933
380 Ga0307508_10127946
381 Ga0307514_10005510
382 Ga0307514_10091862
383 Ga0307514_10206689
384 Ga0307516_10011857
385 Ga0307516_10013467
386 Ga0307516_10046622
387 Ga0307516_10353503
388 Ga0307518_10079090
389 Ga0307518_10099609
390 Ga0307507_10007275
391 Ga0307507_10011225
392 Ga0307507_10172215
393 Ga0307510_10020477
394 Ga0395900_0143404
395 Ga0395898_0005345
396 Ga0395898_0056734
397 Ga0395898_0098961
398 Ga0395898_0322833
399 Ga0395905_0903194
400 Ga0436364_0380054
401 Ga0395901_0024259
402 Ga0439436_0003339
403 Ga0451807_0227220
404 Ga0451833_0024043
405 Ga0451837_0955691
406 Ga0451853_0207336
407 Ga0439433_0009877
408 Ga0439448_0014776
409 Ga0439432_023765
410 Ga0439449_0002517
411 Ga0439449_0010308
412 Ga0439457_001269
413 Ga0439457_003873
414 Ga0439462_0019980
415 Ga0450903_000265
416 Ga0439458_0004347
417 Ga0466969_0195282
418 Ga0466972_0012889
419 Ga0466972_0017015
420 Ga0466972_0087570
421 Ga0466972_0132804
422 Ga0466972_0238172
423 Ga0466965_0001600
424 Ga0466965_0035517
425 Ga0466965_0053149
426 Ga0466965_0098020
427 Ga0466966_0101192
428 Ga0466966_0167420
429 Ga0466961_0074835
430 Ga0466961_0143991
431 Ga0466963_0000924
432 Ga0466970_0004160
433 Ga0466970_0010015
434 Ga0466957_0002411
435 Ga0466959_0000407
436 Ga0466958_0017783
437 Ga0466967_0122991
438 Ga0466967_0188475
439 Ga0466967_0271220
440 Ga0495617_014395
441 Ga0495592_0061899
442 Ga0495603_0008147
443 Ga0495603_0073113
444 Ga0495629_0003411
445 Ga0495629_0007096
446 Ga0495629_0078296
447 Ga0495629_0388395
448 Ga0495629_0416168
449 Ga0495638_0017167
450 Ga0495638_0313510
451 Ga0495651_0008209
452 Ga0495605_0014269
453 Ga0495662_0000672
454 Ga0495662_0006384
455 Ga0495664_0000531
456 Ga0495585_0035564
457 Ga0495585_0193279
458 Ga0495594_0019666
459 Ga0495594_0034479
460 Ga0495594_0054917
461 Ga0495594_0087935
462 Ga0495594_0247777
463 Ga0495607_0086992
464 Ga0495583_0131969
465 Ga0495606_0005812
466 Ga0495608_0187980
467 Ga0495616_0025381
468 Ga0495620_0014327
469 Ga0495628_0152170
470 Ga0495630_0229728
471 Ga0495631_0012555
472 Ga0495631_0094924
473 Ga0495643_0020004
474 Ga0495648_0027624
475 Ga0495648_0033703
476 Ga0495666_0080672
477 Ga0495666_0096087
478 Ga0495640_0048084
479 Ga0495640_0240535
480 Ga0495586_0187405
481 Ga0495587_0001605
482 Ga0495597_0022779
483 Ga0495597_0125881
484 Ga0495645_0015583
485 Ga0495622_0018498
486 Ga0495622_0019596
487 Ga0495667_0218118
488 Ga0495668_0009440
489 Ga0495668_0100975
490 Ga0495634_0089005
491 Ga0495634_0388146
492 Ga0495625_0005521
493 Ga0495625_0217187
494 Ga0495635_0001686
495 Ga0495635_0182441
496 Ga0495588_0000456
497 Ga0495588_0032449
498 Ga0495657_0010685
499 Ga0495657_0033928
500 Ga0495623_0275930
501 Ga0495623_0320425
502 Ga0495646_0003292
503 Ga0495646_0260932
504 Ga0495613_0000687
505 Ga0495613_0001816
506 Ga0495613_0004172
507 Ga0495613_0009882
508 Ga0495613_0145771
509 Ga0495613_0290520
510 Ga0495624_0071631
511 Ga0495624_0092063
512 Ga0495624_0267135
513 Ga0495671_0071648
514 Ga0495649_0083774
515 Ga0495589_0012456
516 Ga0495589_0016004
517 Ga0495589_0249578
518 Ga0495581_0040624
519 Ga0495581_0142881
520 Ga0495604_0000486
521 Ga0495604_0021233
522 Ga0495604_0358918
523 Ga0495636_0000378
524 Ga0495636_0000480
525 Ga0495636_0062679
526 Ga0495636_0105553
527 Ga0495674_0065324
528 Ga0495674_0071717
529 Ga0495672_0080951
530 Ga0495676_0016402
531 Ga0495676_0095651
532 Ga0495680_0025907
533 Ga0495687_001872
534 Ga0495687_002310
535 Ga0495687_071200
536 Ga0495687_078384
537 Ga0495687_104170
538 Ga0495675_0043736
539 Ga0495675_0112394
540 Ga0495675_0186800
541 Ga0495685_000580
542 Ga0495685_010363
543 Ga0495685_058757
544 Ga0495685_138927
545 Ga0495681_0005733
546 Ga0495681_0129146
547 Ga0495681_0174007
548 Ga0495593_0001735
549 Ga0495593_0039004
550 Ga0495602_0069441
551 Ga0495614_0003747
552 Ga0495626_0021157
553 Ga0496108_0090968
554 Ga0496109_0060869
555 Ga0496113_0281839
556 Ga0501031_0040916
557 Ga0501032_0034430
558 Ga0501032_0431798
559 Ga0501033_0000804
560 Ga0501033_0003240
561 Ga0501033_0029681
562 Ga0501033_0141894
563 Ga0501034_0006262
564 Ga0501034_0039799
565 Ga0501034_0612804
566 Ga0501036_0014218
567 Ga0501036_0041884
568 Ga0501036_0442874
569 Ga0501037_0027741
570 Ga0501038_0003306
571 Ga0501038_0355849
572 Ga0501038_0448148
573 Ga0501039_0004258
574 Ga0501039_0352134
575 Ga0501039_0421994
576 Ga0501043_0008989
577 Ga0501043_0493687
578 Ga0501046_0007115
579 Ga0501046_0082174
580 Ga0501047_0075160
581 Ga0501047_0410163
582 Ga0501047_0565673
583 Ga0501048_0036863
584 Ga0501068_0240894
585 Ga0501070_0005046
586 Ga0501070_0331518
587 Ga0501070_0413598
588 Ga0501070_0475706
589 Ga0501073_0171106
590 Ga0501074_0002394
591 Ga0501080_0124564
592 Ga0501035_0012915
593 Ga0501035_0069896
594 Ga0501035_0442880
595 Ga0501044_0006947
596 Ga0501044_0020592
597 Ga0501044_0039260
598 Ga0501044_0051897
599 Ga0501044_0729684
600 Ga0501045_0362666
601 nmdc:mga03n38_184530_c1
602 nmdc:mga03n38_224550_c1
603 nmdc:mga03n38_58088_c1
604 nmdc:mga06z11_1510_c1
605 nmdc:mga06z11_435631_c1
606 nmdc:mga04h51_2299_c1
607 nmdc:mga07m45_183458_c1
608 Ga0495619_0011486
609 Ga0500640_130025
610 Ga0500618_038587
611 Ga0500600_0185575
612 Ga0500636_0077173
613 Ga0501082_0602932
614 Ga0466962_0000216
615 Ga0466962_0085128
616 2547408963
617 2585306518
618 2585320051
619 2616693285
620 2643947415
621 2644263357
622 2644386147
623 2644433114
624 2644442079
625 2644631676
626 2784586354
627 2785346453
628 2785366610
629 2786667688
630 2808847149
631 2808917956
632 2809229854
633 2811846685
634 2812360811
635 2812482738
636 2852639454
637 2862290150
638 2862293056
639 2867435063
640 2873157905
641 2877683940
642 2912723132
643 2912726599
644 2918502162
645 2919469985
646 2946065059
647 2946073491
648 2947232376
649 2954389236
650 2954673828
651 2954690164
652 2954700011
653 2954702207
654 2954718839
655 2954728808
656 2954733003
657 2954747708
658 2954751883
659 2954766830
660 3006394411
661 3006428508
662 3006486739
663 3006496967
664 8008581152
665 8023626077
666 8025484271
667 8048407287
668 8056451943
669 8056670310
670 8056832743

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

20

66

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mnl-assembly1.cif.gz_A the crystal structure of kstr (rv3574) from mycobacterium tuberculosis h37rv 0.697 11 175
3mnl-assembly1.cif.gz_B the crystal structure of kstr (rv3574) from mycobacterium tuberculosis h37rv 0.6916 11 175
5cxg-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis kstr in complex with peg 0.6859 11 175
5cxg-assembly2.cif.gz_D crystal structure of mycobacterium tuberculosis kstr in complex with peg 0.6827 14 175
3bjb-assembly3.cif.gz_E crystal structure of a tetr transcriptional regulator from rhodococcus sp. rha1 0.6772 19 171
ID Description Score Start End Superfamily
1z77A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9848 16 58 1.10.10.60
5gpaB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.981 19 56 1.10.10.60
3whbA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9808 19 58 1.10.10.60
2wv1B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9785 15 58 1.10.10.60
2fq4A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9718 16 58 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A4R7MIL8-F1-model_v4 TetR family transcriptional regulator 0.752 1 177 GO:0000976
GO:0003700
AF-A0A495HMQ0-F1-model_v4 deleted 0.7118 1 187
AF-A0A4R5A8J6-F1-model_v4 TetR/AcrR family transcriptional regulator 0.7103 1 175 GO:0000976
GO:0003700
AF-A0A0C2AW99-F1-model_v4 TetR family transcriptional regulator 0.7091 1 192 GO:0000976
GO:0003700
AF-S4AUC4-F1-model_v4 Putative HTH-type transcriptional regulator BetI 0.7027 13 193 GO:0000976
GO:0003700
GO:0016020

Map