F411980

General Info

Members Datasets Scaffolds Average Seq Length
334 186 334 152

Family's Representative Sequence

Representative Sequence 3300049580|Ga0501046_0730614|Ga0501046_0730614_50_553
Length 167
Sequence MKRAIVGPERSLKSMNKRFHLTKQGVDELKAELEELVSNRPVIAERIKTAREFGDLGENMEYTAARQDQERNDSRISEIEHILQNVTVITSPKSDSKVVLGSVVKLKSEDGKAKQFQVVGTVEADPLNGKISDESPIGRALMGQKEGTEVEIKTPAETAIYKIVDIS

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
20 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
46 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
47 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
48 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
49 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
50 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
67 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013874 Rhizosphere microbial communities from switchgrass harvested rhizosphere in Austin, TX, USA - RS_213 Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
114 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
115 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
116 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
117 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
118 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
119 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
120 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
121 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
122 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
123 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
124 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
125 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
126 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
127 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
128 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
129 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
130 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
131 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
132 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
133 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
134 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
135 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
136 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
137 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
138 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
139 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
140 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
143 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
144 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
145 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
146 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
147 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
148 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
161 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
162 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
165 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
166 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
167 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
168 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
169 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
170 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
171 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
172 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
173 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
174 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
175 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
176 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
177 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
180 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
181 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
182 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
183 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
184 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
185 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
186 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.7
Metatranscriptomes 0.3
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.36
Nodule 0
Rhizoplane 0.9
Rhizosphere 76.35
Stem 0
Stem Tuber 0
Unclassified 2.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1002611 3300001915 Bacteria 4620
2 JGI24741J21665_1007821 3300001915 Bacteria 2052
3 JGI24740J21852_10003217 3300001979 Bacteria 7207
4 JGI24740J21852_10017892 3300001979 Bacteria 2526
5 JGI24737J22298_10000002 3300001990 Bacteria 76949
6 JGI24735J21928_10000042 3300002067 Bacteria 58971
7 JGI24742J22300_10000112 3300002244 Bacteria 11736
8 rootH1_10182006 3300003316 Bacteria 1774
9 rootH2_10022529 3300003320 Bacteria 2553
10 rootH2_10062804 3300003320 Unclassified 3471
11 rootH2_10301742 3300003320 Unclassified 2093
12 rootH2_10334558 3300003320 Archaea 2690
13 rootL2_10033283 3300003322 Bacteria 1868
14 rootL2_10120990 3300003322 Bacteria 12741
15 rootH1_10114985 3300003323 Bacteria 1912
16 JGI25405J52794_10013206 3300003911 Bacteria 1599
17 Ga0070658_10000064 3300005327 Bacteria 106537
18 Ga0070658_10000669 3300005327 Bacteria 29694
19 Ga0070658_10313236 3300005327 Bacteria 1339
20 Ga0070676_10000946 3300005328 Bacteria 14414
21 Ga0070683_100000130 3300005329 Bacteria 48482
22 Ga0070683_100000630 3300005329 Bacteria 25350
23 Ga0070683_101547820 3300005329 Unclassified 637
24 Ga0070683_101650534 3300005329 Bacteria 616
25 Ga0070690_100000331 3300005330 Bacteria 24172
26 Ga0068869_100304212 3300005334 Unclassified 1288
27 Ga0070680_100000491 3300005336 Bacteria 27129
28 Ga0070680_100001977 3300005336 Bacteria 15080
29 Ga0070680_100318872 3300005336 Bacteria 1319
30 Ga0070680_100464682 3300005336 Unclassified 1081
31 Ga0070682_100825431 3300005337 Bacteria 755
32 Ga0070660_100001133 3300005339 Bacteria 17973
33 Ga0070689_100720100 3300005340 Unclassified 873
34 Ga0070661_100625200 3300005344 Unclassified 872
35 Ga0070668_101240772 3300005347 Bacteria 676
36 Ga0070675_101269916 3300005354 Unclassified 678
37 Ga0070671_100018387 3300005355 Bacteria 5677
38 Ga0070671_100232849 3300005355 Bacteria 1563
39 Ga0070673_100787751 3300005364 Bacteria 877
40 Ga0070673_102156380 3300005364 Bacteria 529
41 Ga0070659_100369465 3300005366 Bacteria 1206
42 Ga0070667_100001577 3300005367 Bacteria 20416
43 Ga0070667_100014792 3300005367 Bacteria 6446
44 Ga0070667_101299885 3300005367 Unclassified 681
45 Ga0070714_100000495 3300005435 Bacteria 28541
46 Ga0070663_100350401 3300005455 Bacteria 1195
47 Ga0070678_100042617 3300005456 Bacteria 3228
48 Ga0070681_10069820 3300005458 Bacteria 3479
49 Ga0070681_10074899 3300005458 Unclassified 3346
50 Ga0068867_101114178 3300005459 Bacteria 721
51 Ga0070679_100000463 3300005530 Bacteria 34512
52 Ga0070679_100061062 3300005530 Bacteria 3757
53 Ga0070679_100081615 3300005530 Unclassified 3223
54 Ga0070679_100215385 3300005530 Bacteria 1883
55 Ga0070679_100215553 3300005530 Unclassified 1882
56 Ga0070679_100825240 3300005530 Unclassified 870
57 Ga0070684_100000268 3300005535 Bacteria 36020
58 Ga0070684_100002696 3300005535 Bacteria 13117
59 Ga0070684_100021351 3300005535 Bacteria 5386
60 Ga0070684_100972500 3300005535 Unclassified 796
61 Ga0068853_100012120 3300005539 Bacteria 7013
62 Ga0068853_100162654 3300005539 Bacteria 2015
63 Ga0068855_100000003 3300005563 Bacteria 589862
64 Ga0068855_100083719 3300005563 Bacteria 3695
65 Ga0068855_100293149 3300005563 Unclassified 1803
66 Ga0068855_100339656 3300005563 Unclassified 1656
67 Ga0068855_101204522 3300005563 Unclassified 787
68 Ga0070664_100371158 3300005564 Unclassified 1304
69 Ga0068857_100118561 3300005577 Bacteria 2382
70 Ga0068856_100001042 3300005614 Bacteria 29439
71 Ga0068852_100314409 3300005616 Bacteria 1519
72 Ga0068859_100563185 3300005617 Bacteria 1234
73 Ga0068859_101032339 3300005617 Bacteria 903
74 Ga0068864_100620750 3300005618 Bacteria 1051
75 Ga0068863_100465875 3300005841 Bacteria 1241
76 Ga0068863_100472885 3300005841 Bacteria 1232
77 Ga0068863_100514427 3300005841 Bacteria 1180
78 Ga0068860_100009922 3300005843 Bacteria 9439
79 Ga0081455_10000003 3300005937 Bacteria 367763
80 Ga0070717_10169316 3300006028 Unclassified 1899
81 Ga0075365_10000021 3300006038 Bacteria 64483
82 Ga0075365_10048115 3300006038 Bacteria 2806
83 Ga0075365_10065255 3300006038 Bacteria 2440
84 Ga0075365_11138450 3300006038 Unclassified 549
85 Ga0075368_10184741 3300006042 Bacteria 879
86 Ga0075364_10000280 3300006051 Bacteria 24925
87 Ga0075364_10036171 3300006051 Bacteria 3192
88 Ga0075364_10053063 3300006051 Unclassified 2650
89 Ga0075364_10053567 3300006051 Bacteria 2637
90 Ga0075364_10123383 3300006051 Unclassified 1735
91 Ga0075364_10446641 3300006051 Unclassified 883
92 Ga0075362_10012279 3300006177 Bacteria 3400
93 Ga0075362_10048084 3300006177 Bacteria 1902
94 Ga0075369_10000012 3300006186 Bacteria 74833
95 Ga0075369_10000086 3300006186 Bacteria 24780
96 Ga0075366_10000001 3300006195 Bacteria 569172
97 Ga0075366_10003444 3300006195 Bacteria 8347
98 Ga0075366_10003796 3300006195 Bacteria 8036
99 Ga0075366_10004767 3300006195 Bacteria 7314
100 Ga0075366_10024601 3300006195 Bacteria 3512
101 Ga0097621_100000002 3300006237 Bacteria 172240
102 Ga0097621_100048777 3300006237 Bacteria 3437
103 Ga0097621_100325409 3300006237 Bacteria 1362
104 Ga0068871_100000425 3300006358 Bacteria 29068
105 Ga0068871_100967665 3300006358 Bacteria 791
106 Ga0075428_100082747 3300006844 Bacteria 3502
107 Ga0097620_100563172 3300006931 Bacteria 1234
108 Ga0097620_101032222 3300006931 Bacteria 903
109 Ga0105240_10028148 3300009093 Bacteria 7346
110 Ga0105240_10082394 3300009093 Bacteria 3951
111 Ga0105240_10105906 3300009093 Bacteria 3413
112 Ga0105240_10354461 3300009093 Bacteria 1664
113 Ga0111539_10061512 3300009094 Unclassified 4448
114 Ga0105245_10000002 3300009098 Bacteria 634374
115 Ga0105245_10028457 3300009098 Unclassified 4930
116 Ga0105245_11145945 3300009098 Unclassified 825
117 Ga0105245_11877511 3300009098 Unclassified 652
118 Ga0105245_11955503 3300009098 Bacteria 640
119 Ga0105247_10049019 3300009101 Bacteria 2596
120 Ga0105247_10311574 3300009101 Bacteria 1095
121 Ga0105247_10747659 3300009101 Unclassified 741
122 Ga0105243_10003826 3300009148 Bacteria 12040
123 Ga0105243_10253914 3300009148 Unclassified 1571
124 Ga0105241_10000007 3300009174 Bacteria 343524
125 Ga0105241_10002472 3300009174 Bacteria 13896
126 Ga0105241_10041959 3300009174 Bacteria 3459
127 Ga0105241_10997565 3300009174 Unclassified 783
128 Ga0105242_12918213 3300009176 Bacteria 529
129 Ga0105248_11269498 3300009177 Bacteria 833
130 Ga0105237_10433756 3300009545 Bacteria 1320
131 Ga0105237_10533651 3300009545 Bacteria 1180
132 Ga0105237_10721904 3300009545 Bacteria 1003
133 Ga0105249_10349997 3300009553 Bacteria 1496
134 Ga0105249_10521952 3300009553 Bacteria 1235
135 Ga0105249_12954039 3300009553 Unclassified 546
136 Ga0105033_111752 3300009986 Unclassified 774
137 Ga0105030_105480 3300009987 Bacteria 1073
138 Ga0157373_10000096 3300013100 Bacteria 72510
139 Ga0157371_10002104 3300013102 Bacteria 19431
140 Ga0157370_10053402 3300013104 Bacteria 3853
141 Ga0157370_10129029 3300013104 Bacteria 2359
142 Ga0157369_10000104 3300013105 Bacteria 118133
143 Ga0157369_10096045 3300013105 Bacteria 3162
144 Ga0157374_10000018 3300013296 Bacteria 286683
145 Ga0157374_10001467 3300013296 Bacteria 19900
146 Ga0157374_10041280 3300013296 Unclassified 4251
147 Ga0157374_10408887 3300013296 Bacteria 1355
148 Ga0157374_10642412 3300013296 Bacteria 1073
149 Ga0157374_10825124 3300013296 Bacteria 944
150 Ga0157378_11298042 3300013297 Unclassified 769
151 Ga0157378_12586733 3300013297 Unclassified 560
152 Ga0157378_12599106 3300013297 Unclassified 559
153 Ga0157372_10003969 3300013307 Bacteria 15896
154 Ga0157372_10007367 3300013307 Bacteria 11707
155 Ga0157514_128355 3300013874 Bacteria 1073
156 Ga0163163_10056822 3300014325 Unclassified 3868
157 Ga0157377_10382122 3300014745 Unclassified 954
158 Ga0157379_10002810 3300014968 Bacteria 14675
159 Ga0154015_1411472 3300020610 Unclassified 668
160 Ga0207710_10104848 3300025900 Bacteria 1337
161 Ga0207647_10001056 3300025904 Bacteria 21205
162 Ga0207645_10001561 3300025907 Bacteria 18736
163 Ga0207705_10000104 3300025909 Bacteria 96668
164 Ga0207654_10000002 3300025911 Bacteria 1460142
165 Ga0207654_10003039 3300025911 Bacteria 8506
166 Ga0207707_10095736 3300025912 Bacteria 2595
167 Ga0207707_10150587 3300025912 Unclassified 2034
168 Ga0207707_10315751 3300025912 Bacteria 1350
169 Ga0207695_10021347 3300025913 Bacteria 7389
170 Ga0207695_10071784 3300025913 Bacteria 3535
171 Ga0207695_10226674 3300025913 Bacteria 1775
172 Ga0207695_10258238 3300025913 Bacteria 1640
173 Ga0207660_10000777 3300025917 Bacteria 21196
174 Ga0207660_10006474 3300025917 Bacteria 7596
175 Ga0207660_10015933 3300025917 Bacteria 4970
176 Ga0207660_10352904 3300025917 Unclassified 1179
177 Ga0207657_10000928 3300025919 Bacteria 31002
178 Ga0207652_10001638 3300025921 Bacteria 19644
179 Ga0207652_10013244 3300025921 Bacteria 6681
180 Ga0207652_10020574 3300025921 Bacteria 5437
181 Ga0207652_10031867 3300025921 Bacteria 4427
182 Ga0207652_10267888 3300025921 Bacteria 1541
183 Ga0207687_10000001 3300025927 Bacteria 1130810
184 Ga0207687_10000008 3300025927 Bacteria 497738
185 Ga0207687_10080723 3300025927 Unclassified 2348
186 Ga0207664_10000516 3300025929 Bacteria 27485
187 Ga0207644_10041640 3300025931 Bacteria 3250
188 Ga0207709_10005516 3300025935 Bacteria 7179
189 Ga0207709_10222738 3300025935 Unclassified 1361
190 Ga0207670_10631072 3300025936 Unclassified 882
191 Ga0207661_10000083 3300025944 Bacteria 66112
192 Ga0207661_10000715 3300025944 Bacteria 21548
193 Ga0207661_11317345 3300025944 Bacteria 663
194 Ga0207679_10299792 3300025945 Unclassified 1385
195 Ga0207667_10000008 3300025949 Bacteria 625138
196 Ga0207667_10103862 3300025949 Bacteria 2930
197 Ga0207667_10251517 3300025949 Unclassified 1808
198 Ga0207667_11695281 3300025949 Unclassified 599
199 Ga0207651_10672647 3300025960 Bacteria 910
200 Ga0207651_11430975 3300025960 Bacteria 622
201 Ga0207712_11017694 3300025961 Bacteria 735
202 Ga0207668_11079264 3300025972 Bacteria 719
203 Ga0207658_10005578 3300025986 Bacteria 8610
204 Ga0207658_10010737 3300025986 Bacteria 6227
205 Ga0207658_11289596 3300025986 Unclassified 668
206 Ga0207639_10139459 3300026041 Bacteria 2018
207 Ga0207702_10000622 3300026078 Bacteria 39021
208 Ga0207641_10605058 3300026088 Bacteria 1073
209 Ga0207641_10747884 3300026088 Unclassified 965
210 Ga0207648_11112660 3300026089 Bacteria 741
211 Ga0207676_10439230 3300026095 Bacteria 1228
212 Ga0207676_10636443 3300026095 Bacteria 1028
213 Ga0207674_10378167 3300026116 Bacteria 1369
214 Ga0207683_10323797 3300026121 Bacteria 1412
215 Ga0207698_10285012 3300026142 Bacteria 1530
216 Ga0209813_10131972 3300027866 Bacteria 879
217 Ga0207428_10228071 3300027907 Bacteria 1394
218 Ga0268266_11662460 3300028379 Unclassified 614
219 Ga0265337_1000080 3300028556 Bacteria 45887
220 Ga0265337_1015308 3300028556 Bacteria 2514
221 Ga0265337_1018112 3300028556 Bacteria 2243
222 Ga0265326_10000184 3300028558 Bacteria 31647
223 Ga0265326_10006544 3300028558 Unclassified 3611
224 Ga0265319_1003371 3300028563 Bacteria 8357
225 Ga0265319_1082415 3300028563 Bacteria 1020
226 Ga0265334_10000045 3300028573 Bacteria 93663
227 Ga0265334_10002540 3300028573 Bacteria 8526
228 Ga0265334_10005537 3300028573 Bacteria 5516
229 Ga0265334_10013752 3300028573 Bacteria 3384
230 Ga0265334_10230641 3300028573 Unclassified 640
231 Ga0265318_10003701 3300028577 Bacteria 7632
232 Ga0265323_10032437 3300028653 Bacteria 1937
233 Ga0265322_10000665 3300028654 Bacteria 12844
234 Ga0265336_10000075 3300028666 Bacteria 81725
235 Ga0265336_10000617 3300028666 Bacteria 19610
236 Ga0265338_10000003 3300028800 Bacteria 733923
237 Ga0265338_10000340 3300028800 Bacteria 85032
238 Ga0265338_10031987 3300028800 Bacteria 5144
239 Ga0265338_10035770 3300028800 Bacteria 4765
240 Ga0265338_10059500 3300028800 Bacteria 3365
241 Ga0265338_10266867 3300028800 Bacteria 1256
242 Ga0265324_10003633 3300029957 Bacteria 7239
243 Ga0265330_10021712 3300031235 Bacteria 2926
244 Ga0265328_10016241 3300031239 Unclassified 2899
245 Ga0265320_10032098 3300031240 Bacteria 2692
246 Ga0265320_10104866 3300031240 Bacteria 1300
247 Ga0265329_10091613 3300031242 Bacteria 965
248 Ga0265340_10037527 3300031247 Bacteria 2400
249 Ga0265339_10010835 3300031249 Bacteria 5639
250 Ga0265339_10104186 3300031249 Unclassified 1473
251 Ga0265331_10020642 3300031250 Unclassified 3379
252 Ga0265331_10211120 3300031250 Unclassified 873
253 Ga0265327_10000017 3300031251 Bacteria 445264
254 Ga0265327_10015066 3300031251 Bacteria 5018
255 Ga0265327_10030184 3300031251 Unclassified 3069
256 Ga0265327_10062454 3300031251 Unclassified 1895
257 Ga0265316_10448866 3300031344 Bacteria 925
258 Ga0265313_10010141 3300031595 Bacteria 6013
259 Ga0265313_10012223 3300031595 Bacteria 5259
260 Ga0265313_10189963 3300031595 Unclassified 859
261 Ga0265342_10027656 3300031712 Bacteria 3539
262 Ga0395899_0058543 3300037312 Bacteria 2841
263 Ga0395900_0043721 3300037418 Bacteria 4617
264 Ga0395900_0084392 3300037418 Unclassified 3264
265 Ga0395898_0010439 3300037466 Bacteria 9709
266 Ga0395905_0000682 3300037471 Bacteria 45023
267 Ga0395901_0124100 3300038443 Bacteria 2713
268 Ga0451804_0321501 3300041463 Bacteria 732
269 Ga0451807_1705116 3300041486 Unclassified 810
270 Ga0495629_0091569 3300046459 Bacteria 2122
271 Ga0495641_0047901 3300046461 Bacteria 1961
272 Ga0495662_0108992 3300046476 Unclassified 1356
273 Ga0495583_0024690 3300046506 Bacteria 3015
274 Ga0495622_0000051 3300046557 Bacteria 105674
275 Ga0495658_0000721 3300046683 Bacteria 17864
276 Ga0495658_0333922 3300046683 Bacteria 962
277 Ga0495672_0000016 3300047320 Bacteria 500601
278 Ga0495593_0060562 3300047673 Bacteria 1982
279 Ga0496112_0564161 3300048915 Unclassified 1072
280 Ga0501046_0730614 3300049580 Unclassified 696
281 Ga0501070_0161848 3300049586 Bacteria 1845
282 Ga0501073_0692621 3300049589 Bacteria 703
283 Ga0501080_0000106 3300049742 Bacteria 57580
284 Ga0501276_014126 3300049773 Bacteria 706
285 Ga0501044_0313111 3300049823 Bacteria 1496
286 nmdc:mga03683_595_c1 3300050489 Bacteria 10381
287 nmdc:mga03683_7702_c1 3300050489 Bacteria 3283
288 nmdc:mga00v17_108128_c1 3300050491 Unclassified 1762
289 nmdc:mga00v17_348_c1 3300050491 Bacteria 26056
290 nmdc:mga00v17_42794_c1 3300050491 Unclassified 2725
291 nmdc:mga00v17_47267_c1 3300050491 Bacteria 2606
292 nmdc:mga00v17_816_c1 3300050491 Bacteria 16942
293 nmdc:mga0yw44_13_c1 3300050492 Bacteria 120183
294 nmdc:mga0yw44_171119_c2 3300050492 Unclassified 549
295 nmdc:mga0yw44_3051_c1 3300050492 Bacteria 7329
296 nmdc:mga0yw44_357548_c1 3300050492 Bacteria 984
297 nmdc:mga0k408_12224_c2 3300050493 Bacteria 3452
298 nmdc:mga0k408_1_c1 3300050493 Bacteria 1089059
299 nmdc:mga0k408_21977_c1 3300050493 Bacteria 3588
300 nmdc:mga0k408_722_c1 3300050493 Bacteria 18106
301 nmdc:mga0k408_995_c1 3300050493 Bacteria 15597
302 nmdc:mga06z11_116_c1 3300050494 Bacteria 32792
303 nmdc:mga04h51_154581_c1 3300050495 Bacteria 879
304 nmdc:mga07m45_215750_c1 3300050496 Bacteria 1116
305 nmdc:mga08y16_52219_c1 3300050511 Unclassified 4277
306 nmdc:mga0sz30_1_c1 3300050516 Bacteria 796501
307 nmdc:mga0sz30_4_c1 3300050516 Bacteria 84956
308 Ga0500610_0162131 3300053079 Bacteria 1111
309 Ga0500643_000010 3300053087 Bacteria 408084
310 Ga0500643_000512 3300053087 Bacteria 27514
311 Ga0500644_0000454 3300053088 Bacteria 18751
312 Ga0500644_0055257 3300053088 Bacteria 1377
313 Ga0500583_0000057 3300053092 Bacteria 71874
314 Ga0500583_0002017 3300053092 Bacteria 5987
315 Ga0500651_0195341 3300053093 Bacteria 1196
316 Ga0500566_0000001 3300053094 Bacteria 1101031
317 Ga0500641_0093111 3300053096 Bacteria 1288
318 Ga0500555_000001 3300053103 Bacteria 1353713
319 Ga0500555_098237 3300053103 Unclassified 746
320 Ga0500562_000002 3300053108 Bacteria 977234
321 Ga0500593_000001 3300053117 Bacteria 784404
322 Ga0500594_0000145 3300053118 Bacteria 19337
323 Ga0500614_000993 3300053123 Bacteria 7047
324 Ga0500628_000009 3300053129 Bacteria 122386
325 Ga0500559_0092605 3300053136 Bacteria 1385
326 Ga0500561_0000001 3300053137 Bacteria 957685
327 Ga0500568_0010232 3300053139 Bacteria 4406
328 Ga0500577_0000116 3300053142 Bacteria 19551
329 Ga0500589_000002 3300053147 Bacteria 245055
330 Ga0500589_096779 3300053147 Bacteria 1289
331 Ga0500603_020104 3300053150 Bacteria 1627
332 Ga0500604_0018207 3300053151 Bacteria 1955
333 Ga0500611_000268 3300053727 Bacteria 5534
334 Ga0501084_0484597 3300054114 Unclassified 1045

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300002244 JGI24742J22300_10000112 JGI24742J22300_1000011211 136
2 3300005328 Ga0070676_10000946 Ga0070676_100009468 136
3 3300005337 Ga0070682_100825431 Ga0070682_1008254312 136
4 3300005364 Ga0070673_102156380 Ga0070673_1021563801 136
5 3300005459 Ga0068867_101114178 Ga0068867_1011141781 136
6 3300009098 Ga0105245_11955503 Ga0105245_119555031 136
7 3300009553 Ga0105249_10521952 Ga0105249_105219522 136
8 3300025907 Ga0207645_10001561 Ga0207645_100015618 136
9 3300025960 Ga0207651_11430975 Ga0207651_114309751 136
10 3300025961 Ga0207712_11017694 Ga0207712_110176941 136
11 3300026089 Ga0207648_11112660 Ga0207648_111126602 136
12 3300006038 Ga0075365_11138450 Ga0075365_111384501 137
13 3300031251 Ga0265327_10000017 Ga0265327_10000017458 137
14 3300050492 nmdc:mga0yw44_171119_c2 nmdc:mga0yw44_171119_c2_13_474 137
15 3300005364 Ga0070673_100787751 Ga0070673_1007877512 142
16 3300025960 Ga0207651_10672647 Ga0207651_106726472 142
17 3300009148 Ga0105243_10253914 Ga0105243_102539142 147
18 3300025935 Ga0207709_10222738 Ga0207709_102227382 147
19 3300028556 Ga0265337_1000080 Ga0265337_10000803 147
20 3300028563 Ga0265319_1082415 Ga0265319_10824152 147
21 3300028573 Ga0265334_10230641 Ga0265334_102306411 147
22 3300028800 Ga0265338_10031987 Ga0265338_100319874 147
23 3300031240 Ga0265320_10104866 Ga0265320_101048662 147
24 3300031344 Ga0265316_10448866 Ga0265316_104488662 147
25 3300013296 Ga0157374_10825124 Ga0157374_108251242 148
26 3300028800 Ga0265338_10266867 Ga0265338_102668672 148
27 3300005367 Ga0070667_100014792 Ga0070667_1000147926 149
28 3300005617 Ga0068859_101032339 Ga0068859_1010323392 149
29 3300005841 Ga0068863_100465875 Ga0068863_1004658752 149
30 3300005843 Ga0068860_100009922 Ga0068860_1000099228 149
31 3300006931 Ga0097620_101032222 Ga0097620_1010322222 149
32 3300025986 Ga0207658_10010737 Ga0207658_100107373 149
33 3300026088 Ga0207641_10747884 Ga0207641_107478842 149
34 3300005327 Ga0070658_10000669 Ga0070658_1000066915 151
35 3300005327 Ga0070658_10313236 Ga0070658_103132362 151
36 3300005336 Ga0070680_100000491 Ga0070680_10000049118 151
37 3300005336 Ga0070680_100464682 Ga0070680_1004646822 151
38 3300005339 Ga0070660_100001133 Ga0070660_10000113319 151
39 3300005344 Ga0070661_100625200 Ga0070661_1006252002 151
40 3300005355 Ga0070671_100018387 Ga0070671_1000183871 151
41 3300005618 Ga0068864_100620750 Ga0068864_1006207502 151
42 3300005841 Ga0068863_100472885 Ga0068863_1004728852 151
43 3300005841 Ga0068863_100514427 Ga0068863_1005144272 151
44 3300006051 Ga0075364_10446641 Ga0075364_104466412 151
45 3300009098 Ga0105245_11145945 Ga0105245_111459451 151
46 3300009098 Ga0105245_11877511 Ga0105245_118775111 151
47 3300009101 Ga0105247_10311574 Ga0105247_103115742 151
48 3300009174 Ga0105241_10997565 Ga0105241_109975652 151
49 3300009553 Ga0105249_10349997 Ga0105249_103499972 151
50 3300013105 Ga0157369_10096045 Ga0157369_100960453 151
51 3300013297 Ga0157378_11298042 Ga0157378_112980422 151
52 3300013307 Ga0157372_10003969 Ga0157372_100039694 151
53 3300013307 Ga0157372_10007367 Ga0157372_1000736714 151
54 3300014968 Ga0157379_10002810 Ga0157379_100028109 151
55 3300020610 Ga0154015_1411472 Ga0154015_14114722 151
56 3300025917 Ga0207660_10000777 Ga0207660_1000077713 151
57 3300025917 Ga0207660_10352904 Ga0207660_103529042 151
58 3300025919 Ga0207657_10000928 Ga0207657_1000092834 151
59 3300025921 Ga0207652_10020574 Ga0207652_100205741 151
60 3300025931 Ga0207644_10041640 Ga0207644_100416404 151
61 3300025949 Ga0207667_11695281 Ga0207667_116952811 151
62 3300026088 Ga0207641_10605058 Ga0207641_106050582 151
63 3300026095 Ga0207676_10439230 Ga0207676_104392302 151
64 3300028556 Ga0265337_1018112 Ga0265337_10181122 151
65 3300028563 Ga0265319_1003371 Ga0265319_10033712 151
66 3300028573 Ga0265334_10002540 Ga0265334_100025403 151
67 3300028577 Ga0265318_10003701 Ga0265318_100037012 151
68 3300028653 Ga0265323_10032437 Ga0265323_100324372 151
69 3300028654 Ga0265322_10000665 Ga0265322_1000066511 151
70 3300028666 Ga0265336_10000617 Ga0265336_1000061714 151
71 3300029957 Ga0265324_10003633 Ga0265324_100036339 151
72 3300031235 Ga0265330_10021712 Ga0265330_100217122 151
73 3300031239 Ga0265328_10016241 Ga0265328_100162411 151
74 3300031240 Ga0265320_10032098 Ga0265320_100320982 151
75 3300031247 Ga0265340_10037527 Ga0265340_100375272 151
76 3300031249 Ga0265339_10010835 Ga0265339_100108352 151
77 3300031250 Ga0265331_10020642 Ga0265331_100206422 151
78 3300031251 Ga0265327_10062454 Ga0265327_100624542 151
79 3300031595 Ga0265313_10010141 Ga0265313_100101412 151
80 3300031712 Ga0265342_10027656 Ga0265342_100276563 151
81 3300041463 Ga0451804_0321501 Ga0451804_0321501_238_699 151
82 3300041486 Ga0451807_1705116 Ga0451807_1705116_234_695 151
83 3300047320 Ga0495672_0000016 Ga0495672_0000016_396785_397246 151
84 3300049586 Ga0501070_0161848 Ga0501070_0161848_998_1453 151
85 3300053087 Ga0500643_000512 Ga0500643_000512_26397_26858 151
86 3300053092 Ga0500583_0002017 Ga0500583_0002017_5324_5785 151
87 3300053147 Ga0500589_096779 Ga0500589_096779_370_831 151
88 3300005327 Ga0070658_10000064 Ga0070658_10000064100 152
89 3300005336 Ga0070680_100318872 Ga0070680_1003188722 152
90 3300005355 Ga0070671_100232849 Ga0070671_1002328492 152
91 3300005367 Ga0070667_100001577 Ga0070667_10000157719 152
92 3300005435 Ga0070714_100000495 Ga0070714_1000004955 152
93 3300005456 Ga0070678_100042617 Ga0070678_1000426172 152
94 3300005458 Ga0070681_10074899 Ga0070681_100748991 152
95 3300005530 Ga0070679_100061062 Ga0070679_1000610623 152
96 3300005530 Ga0070679_100215553 Ga0070679_1002155532 152
97 3300005530 Ga0070679_100825240 Ga0070679_1008252401 152
98 3300005535 Ga0070684_100021351 Ga0070684_1000213517 152
99 3300005535 Ga0070684_100972500 Ga0070684_1009725001 152
100 3300005539 Ga0068853_100012120 Ga0068853_1000121203 152
101 3300005539 Ga0068853_100162654 Ga0068853_1001626541 152
102 3300005563 Ga0068855_100083719 Ga0068855_1000837192 152
103 3300005577 Ga0068857_100118561 Ga0068857_1001185612 152
104 3300006237 Ga0097621_100048777 Ga0097621_1000487772 152
105 3300006237 Ga0097621_100325409 Ga0097621_1003254092 152
106 3300006358 Ga0068871_100967665 Ga0068871_1009676652 152
107 3300009093 Ga0105240_10082394 Ga0105240_100823942 152
108 3300009093 Ga0105240_10354461 Ga0105240_103544612 152
109 3300009101 Ga0105247_10049019 Ga0105247_100490193 152
110 3300009176 Ga0105242_12918213 Ga0105242_129182131 152
111 3300009177 Ga0105248_11269498 Ga0105248_112694982 152
112 3300009545 Ga0105237_10433756 Ga0105237_104337562 152
113 3300013104 Ga0157370_10129029 Ga0157370_101290292 152
114 3300013296 Ga0157374_10001467 Ga0157374_1000146722 152
115 3300013297 Ga0157378_12586733 Ga0157378_125867331 152
116 3300013297 Ga0157378_12599106 Ga0157378_125991061 152
117 3300025900 Ga0207710_10104848 Ga0207710_101048482 152
118 3300025909 Ga0207705_10000104 Ga0207705_1000010425 152
119 3300025912 Ga0207707_10150587 Ga0207707_101505872 152
120 3300025913 Ga0207695_10071784 Ga0207695_100717842 152
121 3300025913 Ga0207695_10258238 Ga0207695_102582382 152
122 3300025921 Ga0207652_10013244 Ga0207652_100132444 152
123 3300025921 Ga0207652_10267888 Ga0207652_102678882 152
124 3300025929 Ga0207664_10000516 Ga0207664_1000051621 152
125 3300025949 Ga0207667_10103862 Ga0207667_101038622 152
126 3300025986 Ga0207658_10005578 Ga0207658_1000557810 152
127 3300026041 Ga0207639_10139459 Ga0207639_101394591 152
128 3300026116 Ga0207674_10378167 Ga0207674_103781672 152
129 3300026121 Ga0207683_10323797 Ga0207683_103237972 152
130 3300028556 Ga0265337_1015308 Ga0265337_10153082 152
131 3300028558 Ga0265326_10000184 Ga0265326_1000018419 152
132 3300028558 Ga0265326_10006544 Ga0265326_100065443 152
133 3300028573 Ga0265334_10000045 Ga0265334_1000004545 152
134 3300028573 Ga0265334_10005537 Ga0265334_100055375 152
135 3300028666 Ga0265336_10000075 Ga0265336_1000007544 152
136 3300028800 Ga0265338_10000003 Ga0265338_10000003665 152
137 3300028800 Ga0265338_10000340 Ga0265338_1000034044 152
138 3300028800 Ga0265338_10059500 Ga0265338_100595003 152
139 3300031242 Ga0265329_10091613 Ga0265329_100916132 152
140 3300031249 Ga0265339_10104186 Ga0265339_101041862 152
141 3300031250 Ga0265331_10211120 Ga0265331_102111202 152
142 3300031251 Ga0265327_10015066 Ga0265327_100150664 152
143 3300031251 Ga0265327_10030184 Ga0265327_100301842 152
144 3300031595 Ga0265313_10012223 Ga0265313_100122232 152
145 3300031595 Ga0265313_10189963 Ga0265313_101899632 152
146 3300049742 Ga0501080_0000106 Ga0501080_0000106_3489_3947 152
147 3300049823 Ga0501044_0313111 Ga0501044_0313111_109_567 152
148 3300053088 Ga0500644_0055257 Ga0500644_0055257_848_1306 152
149 3300053118 Ga0500594_0000145 Ga0500594_0000145_16933_17391 152
150 3300053129 Ga0500628_000009 Ga0500628_000009_35983_36441 152
151 3300054114 Ga0501084_0484597 Ga0501084_0484597_264_722 152
152 3300001915 JGI24741J21665_1002611 JGI24741J21665_10026112 153
153 3300001915 JGI24741J21665_1007821 JGI24741J21665_10078212 153
154 3300001979 JGI24740J21852_10003217 JGI24740J21852_100032174 153
155 3300001979 JGI24740J21852_10017892 JGI24740J21852_100178922 153
156 3300001990 JGI24737J22298_10000002 JGI24737J22298_1000000281 153
157 3300002067 JGI24735J21928_10000042 JGI24735J21928_1000004258 153
158 3300003316 rootH1_10182006 rootH1_101820062 153
159 3300003320 rootH2_10022529 rootH2_100225291 153
160 3300003320 rootH2_10062804 rootH2_100628044 153
161 3300003320 rootH2_10301742 rootH2_103017422 153
162 3300003320 rootH2_10334558 rootH2_103345582 153
163 3300003322 rootL2_10033283 rootL2_100332831 153
164 3300003322 rootL2_10120990 rootL2_1012099012 153
165 3300003323 rootH1_10114985 rootH1_101149852 153
166 3300003911 JGI25405J52794_10013206 JGI25405J52794_100132061 153
167 3300005329 Ga0070683_100000130 Ga0070683_1000001304 153
168 3300005329 Ga0070683_100000630 Ga0070683_10000063010 153
169 3300005329 Ga0070683_101547820 Ga0070683_1015478202 153
170 3300005329 Ga0070683_101650534 Ga0070683_1016505341 153
171 3300005330 Ga0070690_100000331 Ga0070690_10000033120 153
172 3300005334 Ga0068869_100304212 Ga0068869_1003042122 153
173 3300005336 Ga0070680_100001977 Ga0070680_10000197718 153
174 3300005340 Ga0070689_100720100 Ga0070689_1007201002 153
175 3300005347 Ga0070668_101240772 Ga0070668_1012407721 153
176 3300005354 Ga0070675_101269916 Ga0070675_1012699162 153
177 3300005366 Ga0070659_100369465 Ga0070659_1003694652 153
178 3300005367 Ga0070667_101299885 Ga0070667_1012998851 153
179 3300005455 Ga0070663_100350401 Ga0070663_1003504011 153
180 3300005458 Ga0070681_10069820 Ga0070681_100698204 153
181 3300005530 Ga0070679_100000463 Ga0070679_1000004637 153
182 3300005530 Ga0070679_100081615 Ga0070679_1000816155 153
183 3300005530 Ga0070679_100215385 Ga0070679_1002153852 153
184 3300005535 Ga0070684_100000268 Ga0070684_10000026821 153
185 3300005535 Ga0070684_100002696 Ga0070684_1000026964 153
186 3300005563 Ga0068855_100000003 Ga0068855_100000003618 153
187 3300005563 Ga0068855_100293149 Ga0068855_1002931492 153
188 3300005563 Ga0068855_100339656 Ga0068855_1003396561 153
189 3300005563 Ga0068855_101204522 Ga0068855_1012045221 153
190 3300005564 Ga0070664_100371158 Ga0070664_1003711581 153
191 3300005614 Ga0068856_100001042 Ga0068856_10000104226 153
192 3300005616 Ga0068852_100314409 Ga0068852_1003144092 153
193 3300005617 Ga0068859_100563185 Ga0068859_1005631852 153
194 3300005937 Ga0081455_10000003 Ga0081455_1000000319 153
195 3300006028 Ga0070717_10169316 Ga0070717_101693162 153
196 3300006038 Ga0075365_10000021 Ga0075365_1000002124 153
197 3300006038 Ga0075365_10048115 Ga0075365_100481153 153
198 3300006038 Ga0075365_10065255 Ga0075365_100652552 153
199 3300006042 Ga0075368_10184741 Ga0075368_101847412 153
200 3300006051 Ga0075364_10000280 Ga0075364_1000028020 153
201 3300006051 Ga0075364_10036171 Ga0075364_100361714 153
202 3300006051 Ga0075364_10053063 Ga0075364_100530633 153
203 3300006051 Ga0075364_10053567 Ga0075364_100535672 153
204 3300006051 Ga0075364_10123383 Ga0075364_101233832 153
205 3300006177 Ga0075362_10012279 Ga0075362_100122792 153
206 3300006177 Ga0075362_10048084 Ga0075362_100480841 153
207 3300006186 Ga0075369_10000012 Ga0075369_1000001223 153
208 3300006186 Ga0075369_10000086 Ga0075369_1000008616 153
209 3300006195 Ga0075366_10000001 Ga0075366_1000000145 153
210 3300006195 Ga0075366_10003444 Ga0075366_1000344411 153
211 3300006195 Ga0075366_10003796 Ga0075366_100037966 153
212 3300006195 Ga0075366_10004767 Ga0075366_100047672 153
213 3300006195 Ga0075366_10024601 Ga0075366_100246012 153
214 3300006237 Ga0097621_100000002 Ga0097621_100000002182 153
215 3300006358 Ga0068871_100000425 Ga0068871_10000042524 153
216 3300006844 Ga0075428_100082747 Ga0075428_1000827472 153
217 3300006931 Ga0097620_100563172 Ga0097620_1005631722 153
218 3300009093 Ga0105240_10028148 Ga0105240_100281484 153
219 3300009093 Ga0105240_10105906 Ga0105240_101059063 153
220 3300009094 Ga0111539_10061512 Ga0111539_100615122 153
221 3300009098 Ga0105245_10000002 Ga0105245_10000002626 153
222 3300009098 Ga0105245_10028457 Ga0105245_100284575 153
223 3300009101 Ga0105247_10747659 Ga0105247_107476591 153
224 3300009148 Ga0105243_10003826 Ga0105243_1000382613 153
225 3300009174 Ga0105241_10000007 Ga0105241_1000000750 153
226 3300009174 Ga0105241_10002472 Ga0105241_1000247212 153
227 3300009174 Ga0105241_10041959 Ga0105241_100419593 153
228 3300009545 Ga0105237_10533651 Ga0105237_105336512 153
229 3300009545 Ga0105237_10721904 Ga0105237_107219042 153
230 3300009553 Ga0105249_12954039 Ga0105249_129540391 153
231 3300009986 Ga0105033_111752 Ga0105033_1117521 153
232 3300009987 Ga0105030_105480 Ga0105030_1054802 153
233 3300013100 Ga0157373_10000096 Ga0157373_1000009624 153
234 3300013102 Ga0157371_10002104 Ga0157371_100021049 153
235 3300013104 Ga0157370_10053402 Ga0157370_100534024 153
236 3300013105 Ga0157369_10000104 Ga0157369_1000010426 153
237 3300013296 Ga0157374_10000018 Ga0157374_1000001841 153
238 3300013296 Ga0157374_10041280 Ga0157374_100412801 153
239 3300013296 Ga0157374_10408887 Ga0157374_104088873 153
240 3300013296 Ga0157374_10642412 Ga0157374_106424122 153
241 3300013874 Ga0157514_128355 Ga0157514_1283552 153
242 3300014325 Ga0163163_10056822 Ga0163163_100568222 153
243 3300014745 Ga0157377_10382122 Ga0157377_103821222 153
244 3300025904 Ga0207647_10001056 Ga0207647_1000105620 153
245 3300025911 Ga0207654_10000002 Ga0207654_100000021497 153
246 3300025911 Ga0207654_10003039 Ga0207654_100030394 153
247 3300025912 Ga0207707_10095736 Ga0207707_100957362 153
248 3300025912 Ga0207707_10315751 Ga0207707_103157512 153
249 3300025913 Ga0207695_10021347 Ga0207695_100213474 153
250 3300025913 Ga0207695_10226674 Ga0207695_102266742 153
251 3300025917 Ga0207660_10006474 Ga0207660_100064742 153
252 3300025917 Ga0207660_10015933 Ga0207660_100159332 153
253 3300025921 Ga0207652_10001638 Ga0207652_1000163816 153
254 3300025921 Ga0207652_10031867 Ga0207652_100318672 153
255 3300025927 Ga0207687_10000001 Ga0207687_10000001585 153
256 3300025927 Ga0207687_10000008 Ga0207687_10000008475 153
257 3300025927 Ga0207687_10080723 Ga0207687_100807232 153
258 3300025935 Ga0207709_10005516 Ga0207709_100055166 153
259 3300025936 Ga0207670_10631072 Ga0207670_106310722 153
260 3300025944 Ga0207661_10000083 Ga0207661_1000008349 153
261 3300025944 Ga0207661_10000715 Ga0207661_1000071522 153
262 3300025944 Ga0207661_11317345 Ga0207661_113173451 153
263 3300025945 Ga0207679_10299792 Ga0207679_102997921 153
264 3300025949 Ga0207667_10000008 Ga0207667_10000008608 153
265 3300025949 Ga0207667_10251517 Ga0207667_102515172 153
266 3300025972 Ga0207668_11079264 Ga0207668_110792641 153
267 3300025986 Ga0207658_11289596 Ga0207658_112895962 153
268 3300026078 Ga0207702_10000622 Ga0207702_1000062218 153
269 3300026095 Ga0207676_10636443 Ga0207676_106364431 153
270 3300026142 Ga0207698_10285012 Ga0207698_102850122 153
271 3300027866 Ga0209813_10131972 Ga0209813_101319722 153
272 3300027907 Ga0207428_10228071 Ga0207428_102280712 153
273 3300028379 Ga0268266_11662460 Ga0268266_116624602 153
274 3300028573 Ga0265334_10013752 Ga0265334_100137523 153
275 3300028800 Ga0265338_10035770 Ga0265338_100357702 153
276 3300037312 Ga0395899_0058543 Ga0395899_0058543_889_1350 153
277 3300037418 Ga0395900_0043721 Ga0395900_0043721_1464_1925 153
278 3300037418 Ga0395900_0084392 Ga0395900_0084392_97_558 153
279 3300037466 Ga0395898_0010439 Ga0395898_0010439_1442_1903 153
280 3300037471 Ga0395905_0000682 Ga0395905_0000682_1373_1834 153
281 3300038443 Ga0395901_0124100 Ga0395901_0124100_1463_1924 153
282 3300046459 Ga0495629_0091569 Ga0495629_0091569_198_659 153
283 3300046461 Ga0495641_0047901 Ga0495641_0047901_659_1120 153
284 3300046476 Ga0495662_0108992 Ga0495662_0108992_816_1277 153
285 3300046506 Ga0495583_0024690 Ga0495583_0024690_2320_2781 153
286 3300046557 Ga0495622_0000051 Ga0495622_0000051_78706_79167 153
287 3300046683 Ga0495658_0000721 Ga0495658_0000721_13879_14340 153
288 3300046683 Ga0495658_0333922 Ga0495658_0333922_160_621 153
289 3300047673 Ga0495593_0060562 Ga0495593_0060562_679_1140 153
290 3300048915 Ga0496112_0564161 Ga0496112_0564161_457_918 153
291 3300049580 Ga0501046_0730614 Ga0501046_0730614_50_553 153
292 3300049589 Ga0501073_0692621 Ga0501073_0692621_187_648 153
293 3300049773 Ga0501276_014126 Ga0501276_014126_66_527 153
294 3300050489 nmdc:mga03683_595_c1 nmdc:mga03683_595_c1_4153_4614 153
295 3300050489 nmdc:mga03683_7702_c1 nmdc:mga03683_7702_c1_2221_2682 153
296 3300050491 nmdc:mga00v17_108128_c1 nmdc:mga00v17_108128_c1_721_1182 153
297 3300050491 nmdc:mga00v17_348_c1 nmdc:mga00v17_348_c1_12665_13126 153
298 3300050491 nmdc:mga00v17_42794_c1 nmdc:mga00v17_42794_c1_2007_2474 153
299 3300050491 nmdc:mga00v17_47267_c1 nmdc:mga00v17_47267_c1_70_531 153
300 3300050491 nmdc:mga00v17_816_c1 nmdc:mga00v17_816_c1_15532_15993 153
301 3300050492 nmdc:mga0yw44_13_c1 nmdc:mga0yw44_13_c1_61948_62409 153
302 3300050492 nmdc:mga0yw44_3051_c1 nmdc:mga0yw44_3051_c1_4631_5098 153
303 3300050492 nmdc:mga0yw44_357548_c1 nmdc:mga0yw44_357548_c1_329_790 153
304 3300050493 nmdc:mga0k408_12224_c2 nmdc:mga0k408_12224_c2_1002_1463 153
305 3300050493 nmdc:mga0k408_1_c1 nmdc:mga0k408_1_c1_1034066_1034527 153
306 3300050493 nmdc:mga0k408_21977_c1 nmdc:mga0k408_21977_c1_2153_2614 153
307 3300050493 nmdc:mga0k408_722_c1 nmdc:mga0k408_722_c1_13286_13747 153
308 3300050493 nmdc:mga0k408_995_c1 nmdc:mga0k408_995_c1_5033_5494 153
309 3300050494 nmdc:mga06z11_116_c1 nmdc:mga06z11_116_c1_28643_29104 153
310 3300050495 nmdc:mga04h51_154581_c1 nmdc:mga04h51_154581_c1_68_529 153
311 3300050496 nmdc:mga07m45_215750_c1 nmdc:mga07m45_215750_c1_475_936 153
312 3300050511 nmdc:mga08y16_52219_c1 nmdc:mga08y16_52219_c1_2914_3375 153
313 3300050516 nmdc:mga0sz30_1_c1 nmdc:mga0sz30_1_c1_778751_779212 153
314 3300050516 nmdc:mga0sz30_4_c1 nmdc:mga0sz30_4_c1_52806_53267 153
315 3300053079 Ga0500610_0162131 Ga0500610_0162131_270_731 153
316 3300053087 Ga0500643_000010 Ga0500643_000010_32885_33352 153
317 3300053088 Ga0500644_0000454 Ga0500644_0000454_9836_10297 153
318 3300053092 Ga0500583_0000057 Ga0500583_0000057_19032_19493 153
319 3300053093 Ga0500651_0195341 Ga0500651_0195341_338_799 153
320 3300053094 Ga0500566_0000001 Ga0500566_0000001_1010730_1011191 153
321 3300053096 Ga0500641_0093111 Ga0500641_0093111_384_845 153
322 3300053103 Ga0500555_000001 Ga0500555_000001_1259348_1259809 153
323 3300053103 Ga0500555_098237 Ga0500555_098237_73_537 153
324 3300053108 Ga0500562_000002 Ga0500562_000002_169893_170354 153
325 3300053117 Ga0500593_000001 Ga0500593_000001_338634_339098 153
326 3300053123 Ga0500614_000993 Ga0500614_000993_4120_4581 153
327 3300053136 Ga0500559_0092605 Ga0500559_0092605_555_1016 153
328 3300053137 Ga0500561_0000001 Ga0500561_0000001_64749_65210 153
329 3300053139 Ga0500568_0010232 Ga0500568_0010232_3367_3834 153
330 3300053142 Ga0500577_0000116 Ga0500577_0000116_4864_5325 153
331 3300053147 Ga0500589_000002 Ga0500589_000002_153501_153962 153
332 3300053150 Ga0500603_020104 Ga0500603_020104_26_487 153
333 3300053151 Ga0500604_0018207 Ga0500604_0018207_1223_1684 153
334 3300053727 Ga0500611_000268 Ga0500611_000268_4472_4933 153

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03449

GreA_GreB_N

Transcription elongation factor, N-terminal

19

88

0.98

PF01272

GreA_GreB

Transcription elongation factor, GreA/GreB, C-term

93

167

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tob-assembly1.cif.gz_E 1.95a resolution structure of bfrb (q151l) from pseudomonas aeruginosa 0.9285 12 70
5d8s-assembly1.cif.gz_D-2 2.55a resolution structure of bfrb (e85a) from pseudomonas aeruginosa 0.9257 15 70
4pjw-assembly1.cif.gz_A crystal structure of human stromal antigen 2 (sa2) in complex with sister chromatid cohesion protein 1 (scc1), with bound mes 0.9176 12 71
4wqt-assembly3.cif.gz_Z thermus thermophilus rna polymerase complexed with an rna cleavage stimulating factor (a grea/gfh1 chimeric protein) 0.9118 3 152
1grj-assembly1.cif.gz_A grea transcript cleavage factor from escherichia coli 0.9061 3 152
ID Description Score Start End Superfamily
af_Q2FXW7_4_78_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9944 3 75 1.10.287.180
af_P0A6W5_1_75_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9829 4 75 1.10.287.180
af_P9WMT9_4_78_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9745 3 76 1.10.287.180
1grjA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9592 3 75 1.10.287.180
af_Q2FXW7_4_78_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9554 3 75 1.10.287.180
ID Description Score Start End GO Terms
AF-A0A660LXI5-F1-model_v4 Transcription elongation factor GreA 0.9723 1 131 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A7W4RBT2-F1-model_v4 deleted 0.9626 4 153
AF-A0A660LXI5-F1-model_v4 Transcription elongation factor GreA 0.9578 1 131 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-C9KJ19-F1-model_v4 Transcription elongation factor GreA (Transcript cleavage factor GreA) 0.9542 2 153 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-L7UAW9-F1-model_v4 Transcription elongation factor GreB (Transcript cleavage factor GreB) 0.9542 6 153 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063

Feature Viewer

pLDDT pTM Quality
86.02 0.66 Medium
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Predicted Structure (AlphaFold2)

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