F411594

General Info

Members Datasets Scaffolds Average Seq Length
333 216 667 221

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2997600082|2997602563
Length 260
Sequence RELRFLIGLSFVVLRVTRCSCCVGTMRAMGTPTDELWRELTRLGIRPGDEVVVPSYGTPEAAEAVLLAGARPVFVDIDAETFCIDPAAVAEAITPRTAAVVAVHTFGHPADMAGLTALGQRHGVQIVGYGAQPDPAGEILRRQANAAYLDGKLRGVITPGVRQGVEHTYQQYVVRVPGNGRPDRDAFARTLRSRGVVCHVPVQTPAHRTARFRRDLWLAETERAADECLALPVDPAMSRRELQRVVSACNALGGLLQSAA

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
11 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
12 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
13 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
14 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
15 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
16 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
17 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
18 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
22 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
23 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
24 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
25 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
26 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
27 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
28 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
29 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
30 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
31 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
32 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
33 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
34 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
35 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
36 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
37 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
38 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
39 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
40 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
41 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
42 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
43 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
44 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
45 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
46 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
47 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
48 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
49 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
50 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
51 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
52 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
55 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
56 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
57 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
58 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
59 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
60 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
61 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
62 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
65 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
66 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
67 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
68 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
69 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
70 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
71 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
74 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
77 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
78 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
79 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
80 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
83 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
84 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
85 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
86 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
87 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
88 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
91 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
92 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
93 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
94 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
97 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
98 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
99 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
100 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
101 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
102 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
103 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
104 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
117 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
118 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
119 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
120 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
121 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
122 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
137 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
144 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
145 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
146 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
147 3300053106 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 endosphere Metagenome Endosphere
148 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
149 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
150 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
151 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
152 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
153 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
154 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
155 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
156 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
157 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
158 2643221647 Streptomyces sp. Root369 Isolate Unclassified
159 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
160 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
161 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
162 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
163 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
164 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
165 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
166 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
167 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
168 2808606448 Streptomyces sp. 193411 Isolate Unclassified
169 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
170 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
171 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
172 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
173 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
174 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
175 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
176 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
177 2862574272 Streptomyces sp. AcE210 Isolate Nodule
178 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
179 2867428634 Streptomyces sp. RP5T Isolate Unclassified
180 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
181 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
182 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
183 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
184 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
185 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
186 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
187 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
188 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
189 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
190 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
191 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
192 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
193 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
194 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
195 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
196 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
197 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
198 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
199 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
200 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
201 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
202 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
203 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
204 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
205 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
206 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
207 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
208 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
209 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
210 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
211 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
212 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
213 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
214 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
215 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
216 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.48
Metatranscriptomes 0.3
Isolates 19.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.8
Nodule 1.2
Rhizoplane 0.6
Rhizosphere 78.08
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10041478 3300001989 Bacteria 1531
2 JGI24737J22298_10042299 3300001990 Bacteria 1396
3 JGI24735J21928_10036435 3300002067 Bacteria 1443
4 rootH1_10061537 3300003316 Bacteria 2056
5 rootH1_10092348 3300003316 Bacteria 1678
6 rootH1_10000485 3300003316 Bacteria 30150
7 rootH1_10000485 3300003323 Bacteria 1099
8 rootH1_10010837 3300003323 Bacteria 1099
9 JGI25160J50197_1010438 3300003354 Bacteria 3360
10 JGI25160J50197_1043958 3300003354 Bacteria 1001
11 JGI25160J50197_1052597 3300003354 Bacteria 855
12 Ga0006562J51391_1166950 3300003578 Bacteria 872
13 Ga0081455_10127894 3300005937 Bacteria 1991
14 Ga0075365_10109860 3300006038 Bacteria 1894
15 Ga0075367_10071617 3300006178 Bacteria 2085
16 Ga0099826_10275525 3300006948 Bacteria 873
17 Ga0105244_10152021 3300009036 Bacteria 1109
18 Ga0157369_10352324 3300013105 Bacteria 1529
19 Ga0157372_10124277 3300013307 Bacteria 2966
20 Ga0182007_10000101 3300015262 Bacteria 60723
21 Ga0182005_1015235 3300015265 Bacteria 2147
22 Ga0183367_1019 3300015688 Bacteria 100516
23 Ga0207696_1094373 3300025711 Bacteria 818
24 Ga0207647_10053846 3300025904 Bacteria 2478
25 Ga0209371_1003823 3300027312 Bacteria 6989
26 Ga0307517_10029578 3300028786 Bacteria 6461
27 Ga0307515_10010525 3300028794 Bacteria 17719
28 Ga0307515_10167687 3300028794 Bacteria 2205
29 Ga0307515_10388988 3300028794 Bacteria 1024
30 Ga0268256_1026148 3300030500 Bacteria 1472
31 Ga0307511_10008445 3300030521 Bacteria 10297
32 Ga0307512_10014324 3300030522 Bacteria 7393
33 Ga0307512_10078105 3300030522 Bacteria 2400
34 Ga0307513_10076798 3300031456 Bacteria 3462
35 Ga0307509_10054575 3300031507 Bacteria 4253
36 Ga0307508_10029837 3300031616 Bacteria 4928
37 Ga0307508_10051752 3300031616 Bacteria 3649
38 Ga0307508_10116003 3300031616 Bacteria 2279
39 Ga0307508_10260148 3300031616 Bacteria 1330
40 Ga0307514_10050814 3300031649 Bacteria 3215
41 Ga0307514_10124064 3300031649 Bacteria 1794
42 Ga0307516_10060826 3300031730 Bacteria 3668
43 Ga0307516_10127093 3300031730 Bacteria 2333
44 Ga0307518_10142000 3300031838 Bacteria 1673
45 Ga0307518_10285187 3300031838 Bacteria 1018
46 Ga0307507_10136011 3300033179 Bacteria 1903
47 Ga0307507_10299220 3300033179 Bacteria 988
48 Ga0307510_10158406 3300033180 Bacteria 1866
49 Ga0307510_10192670 3300033180 Bacteria 1584
50 Ga0307510_10438590 3300033180 Bacteria 747
51 Ga0395900_0182704 3300037418 Bacteria 2130
52 Ga0395898_0006034 3300037466 Bacteria 13009
53 Ga0395898_0028130 3300037466 Bacteria 5637
54 Ga0395905_0650933 3300037471 Bacteria 956
55 Ga0439436_0002037 3300041404 Bacteria 6015
56 Ga0439436_0002667 3300041404 Bacteria 5378
57 Ga0439439_0029958 3300041406 Bacteria 1382
58 Ga0439439_0054481 3300041406 Bacteria 1053
59 Ga0451802_0313481 3300041460 Bacteria 898
60 Ga0451853_0740374 3300041512 Bacteria 1875
61 Ga0451853_1501221 3300041512 Bacteria 2551
62 Ga0439433_0013873 3300041999 Bacteria 1772
63 Ga0439433_0052565 3300041999 Bacteria 962
64 Ga0439448_0022457 3300042005 Bacteria 1961
65 Ga0439449_0005372 3300042007 Bacteria 4907
66 Ga0439457_012512 3300042014 Bacteria 1912
67 Ga0439457_020491 3300042014 Bacteria 1467
68 Ga0439462_0098081 3300042015 Bacteria 806
69 Ga0450894_000742 3300042131 Bacteria 5362
70 Ga0439458_0018457 3300042157 Bacteria 1599
71 Ga0439458_0066277 3300042157 Bacteria 907
72 Ga0466969_0144291 3300044656 Bacteria 1099
73 Ga0466969_0168335 3300044656 Bacteria 1005
74 Ga0466972_0033007 3300044658 Bacteria 2539
75 Ga0466972_0258192 3300044658 Bacteria 814
76 Ga0466965_0002468 3300044683 Bacteria 7864
77 Ga0466965_0167571 3300044683 Bacteria 1154
78 Ga0466966_0012872 3300044684 Bacteria 5540
79 Ga0466961_0000460 3300044693 Bacteria 25690
80 Ga0466961_0056770 3300044693 Bacteria 2494
81 Ga0466961_0340533 3300044693 Bacteria 913
82 Ga0466963_0008410 3300044694 Bacteria 6183
83 Ga0466963_0014990 3300044694 Bacteria 4790
84 Ga0466964_0004668 3300044706 Bacteria 5065
85 Ga0466971_0013886 3300044719 Bacteria 3541
86 Ga0466968_0017666 3300044735 Bacteria 2855
87 Ga0466968_0486034 3300044735 Bacteria 614
88 Ga0466970_0023638 3300044765 Bacteria 3211
89 Ga0466970_0200162 3300044765 Bacteria 1111
90 Ga0466957_0000184 3300044842 Bacteria 28327
91 Ga0466959_0000481 3300045049 Bacteria 23265
92 Ga0466958_0009020 3300045836 Bacteria 5538
93 Ga0466958_0255287 3300045836 Bacteria 1122
94 Ga0466967_0123836 3300045976 Bacteria 2392
95 Ga0466967_0557554 3300045976 Bacteria 1128
96 Ga0495617_017814 3300046452 Bacteria 2400
97 Ga0495592_0112440 3300046454 Bacteria 1925
98 Ga0495592_0225263 3300046454 Bacteria 1251
99 Ga0495603_0030320 3300046455 Bacteria 3257
100 Ga0495603_0059797 3300046455 Bacteria 2252
101 Ga0495603_0109039 3300046455 Bacteria 1615
102 Ga0495603_0232916 3300046455 Bacteria 1061
103 Ga0495629_0108951 3300046459 Bacteria 1931
104 Ga0495629_0121016 3300046459 Bacteria 1823
105 Ga0495629_0158660 3300046459 Bacteria 1571
106 Ga0495629_0292085 3300046459 Bacteria 1117
107 Ga0495629_0302426 3300046459 Bacteria 1095
108 Ga0495629_0567707 3300046459 Bacteria 760
109 Ga0495638_0092747 3300046460 Bacteria 1817
110 Ga0495651_0239738 3300046462 Bacteria 1244
111 Ga0495580_0110887 3300046472 Bacteria 1905
112 Ga0495582_0310934 3300046473 Bacteria 906
113 Ga0495605_0002672 3300046474 Bacteria 10916
114 Ga0495639_0007350 3300046475 Bacteria 4729
115 Ga0495662_0006779 3300046476 Bacteria 5700
116 Ga0495662_0040752 3300046476 Bacteria 2242
117 Ga0495662_0056293 3300046476 Bacteria 1899
118 Ga0495662_0133604 3300046476 Bacteria 1220
119 Ga0495664_0000591 3300046477 Bacteria 18340
120 Ga0495664_0135463 3300046477 Bacteria 1492
121 Ga0495585_0022977 3300046492 Bacteria 3579
122 Ga0495585_0263732 3300046492 Bacteria 856
123 Ga0495594_0015782 3300046499 Bacteria 3972
124 Ga0495594_0081854 3300046499 Bacteria 1803
125 Ga0495594_0350888 3300046499 Bacteria 840
126 Ga0495607_0144928 3300046501 Bacteria 1221
127 Ga0495583_0057811 3300046506 Bacteria 1743
128 Ga0495583_0083635 3300046506 Bacteria 1383
129 Ga0495616_0022167 3300046513 Bacteria 3431
130 Ga0495618_0292003 3300046514 Bacteria 1014
131 Ga0495618_0331975 3300046514 Bacteria 940
132 Ga0495620_0072286 3300046515 Bacteria 1408
133 Ga0495620_0080881 3300046515 Bacteria 1314
134 Ga0495628_0039115 3300046516 Bacteria 3794
135 Ga0495628_0111897 3300046516 Bacteria 2099
136 Ga0495631_0005908 3300046518 Bacteria 6372
137 Ga0495652_0035810 3300046529 Bacteria 4318
138 Ga0495652_0304584 3300046529 Bacteria 1157
139 Ga0495652_0360818 3300046529 Bacteria 1038
140 Ga0495640_0035312 3300046533 Bacteria 3538
141 Ga0495640_0452169 3300046533 Bacteria 784
142 Ga0495586_0072104 3300046535 Bacteria 1888
143 Ga0495587_0076213 3300046536 Bacteria 1947
144 Ga0495609_0096776 3300046538 Bacteria 1280
145 Ga0495597_0198853 3300046542 Bacteria 803
146 Ga0495645_0460803 3300046543 Bacteria 800
147 Ga0495622_0036033 3300046557 Bacteria 2307
148 Ga0495633_0019088 3300046558 Bacteria 3470
149 Ga0495668_0057235 3300046616 Bacteria 2151
150 Ga0495611_0150993 3300046648 Bacteria 1084
151 Ga0495611_0199495 3300046648 Bacteria 933
152 Ga0495625_0018796 3300046660 Bacteria 5382
153 Ga0495625_0166519 3300046660 Bacteria 1473
154 Ga0495625_0400570 3300046660 Bacteria 857
155 Ga0495635_0003082 3300046663 Bacteria 11467
156 Ga0495635_0322064 3300046663 Bacteria 1034
157 Ga0495588_0080367 3300046674 Bacteria 1701
158 Ga0495588_0109669 3300046674 Bacteria 1453
159 Ga0495657_0038259 3300046675 Bacteria 3302
160 Ga0495657_0104260 3300046675 Bacteria 1803
161 Ga0495657_0118558 3300046675 Bacteria 1669
162 Ga0495657_0134716 3300046675 Bacteria 1544
163 Ga0495623_0226728 3300046679 Bacteria 1062
164 Ga0495646_0000577 3300046680 Bacteria 19936
165 Ga0495613_0055738 3300046689 Bacteria 2903
166 Ga0495613_0074351 3300046689 Bacteria 2475
167 Ga0495613_0088303 3300046689 Bacteria 2246
168 Ga0495613_0119031 3300046689 Bacteria 1897
169 Ga0495613_0151393 3300046689 Bacteria 1654
170 Ga0495613_0325787 3300046689 Bacteria 1059
171 Ga0495613_0340598 3300046689 Bacteria 1031
172 Ga0495624_0114766 3300046690 Bacteria 1655
173 Ga0495624_0267161 3300046690 Bacteria 1033
174 Ga0495624_0346033 3300046690 Bacteria 894
175 Ga0495670_0272151 3300046691 Bacteria 905
176 Ga0495649_0125743 3300046694 Bacteria 1354
177 Ga0495649_0158193 3300046694 Bacteria 1188
178 Ga0495589_0034095 3300046794 Bacteria 2555
179 Ga0495589_0037189 3300046794 Bacteria 2439
180 Ga0495589_0080423 3300046794 Bacteria 1585
181 Ga0495589_0166914 3300046794 Bacteria 1047
182 Ga0495589_0189217 3300046794 Bacteria 974
183 Ga0495600_0005086 3300046809 Bacteria 7904
184 Ga0495581_0005618 3300047315 Bacteria 7269
185 Ga0495581_0305320 3300047315 Bacteria 930
186 Ga0495581_0353905 3300047315 Bacteria 857
187 Ga0495581_0395542 3300047315 Bacteria 806
188 Ga0495604_0048301 3300047317 Bacteria 3310
189 Ga0495604_0050353 3300047317 Bacteria 3234
190 Ga0495636_0026139 3300047318 Bacteria 2373
191 Ga0495636_0066887 3300047318 Bacteria 1528
192 Ga0495636_0133186 3300047318 Bacteria 1106
193 Ga0495636_0163260 3300047318 Bacteria 1004
194 Ga0495674_0237515 3300047319 Bacteria 1503
195 Ga0495674_0427601 3300047319 Bacteria 1066
196 Ga0495672_0110999 3300047320 Bacteria 1472
197 Ga0495676_0194822 3300047321 Bacteria 1411
198 Ga0495676_0285834 3300047321 Bacteria 1115
199 Ga0495676_0317861 3300047321 Bacteria 1046
200 Ga0495676_0347760 3300047321 Bacteria 991
201 Ga0495680_0154040 3300047322 Bacteria 1673
202 Ga0495683_0125058 3300047323 Bacteria 1217
203 Ga0495683_0125746 3300047323 Bacteria 1213
204 Ga0495687_002591 3300047443 Bacteria 14240
205 Ga0495687_030814 3300047443 Bacteria 2467
206 Ga0495687_066150 3300047443 Bacteria 1468
207 Ga0495687_092946 3300047443 Bacteria 1150
208 Ga0495687_139710 3300047443 Bacteria 844
209 Ga0495675_0011785 3300047444 Bacteria 5493
210 Ga0495675_0154797 3300047444 Bacteria 1414
211 Ga0495677_0130172 3300047445 Bacteria 963
212 Ga0495685_003616 3300047447 Bacteria 4943
213 Ga0495685_029418 3300047447 Bacteria 1888
214 Ga0495685_054622 3300047447 Bacteria 1351
215 Ga0495685_096480 3300047447 Bacteria 977
216 Ga0495685_101229 3300047447 Bacteria 951
217 Ga0495685_112501 3300047447 Bacteria 895
218 Ga0495685_117291 3300047447 Bacteria 874
219 Ga0495681_0020936 3300047470 Bacteria 3535
220 Ga0495684_0208153 3300047471 Bacteria 1439
221 Ga0495593_0006205 3300047673 Bacteria 7029
222 Ga0495593_0064206 3300047673 Bacteria 1916
223 Ga0495614_0061004 3300048089 Bacteria 1620
224 Ga0495614_0198743 3300048089 Bacteria 906
225 Ga0495678_085094 3300049459 Bacteria 1126
226 Ga0501032_0118380 3300049569 Bacteria 1751
227 Ga0501033_0208934 3300049570 Bacteria 1392
228 Ga0501033_0366620 3300049570 Bacteria 1007
229 Ga0501034_0073106 3300049571 Bacteria 3437
230 Ga0501034_0176999 3300049571 Bacteria 2099
231 Ga0501034_0509380 3300049571 Bacteria 1116
232 Ga0501036_0020597 3300049572 Bacteria 5539
233 Ga0501036_0137070 3300049572 Bacteria 2065
234 Ga0501037_0027964 3300049573 Bacteria 4166
235 Ga0501038_0026013 3300049574 Bacteria 5213
236 Ga0501039_0396281 3300049575 Bacteria 1084
237 Ga0501043_0042828 3300049579 Bacteria 3558
238 Ga0501046_0130620 3300049580 Bacteria 1905
239 Ga0501046_0349157 3300049580 Bacteria 1074
240 Ga0501047_0036744 3300049581 Bacteria 4735
241 Ga0501047_0087101 3300049581 Bacteria 3000
242 Ga0501048_0031167 3300049582 Bacteria 3857
243 Ga0501067_0225018 3300049583 Bacteria 1045
244 Ga0501070_0381347 3300049586 Bacteria 1142
245 Ga0501070_0554589 3300049586 Bacteria 920
246 Ga0501070_0576227 3300049586 Bacteria 899
247 Ga0501235_009496 3300049669 Bacteria 2126
248 Ga0501282_001618 3300049778 Bacteria 2487
249 Ga0501035_0145128 3300049822 Bacteria 2062
250 Ga0501035_0337718 3300049822 Bacteria 1263
251 Ga0501035_0348494 3300049822 Bacteria 1239
252 Ga0501044_0029681 3300049823 Bacteria 5765
253 Ga0501044_0092368 3300049823 Bacteria 3052
254 Ga0501044_0126523 3300049823 Bacteria 2552
255 Ga0501044_0172710 3300049823 Bacteria 2131
256 Ga0501045_0199955 3300049824 Bacteria 1489
257 nmdc:mga0yw44_77436_c1 3300050492 Bacteria 2077
258 nmdc:mga06z11_68315_c1 3300050494 Bacteria 1873
259 nmdc:mga07m45_206048_c1 3300050496 Bacteria 1144
260 Ga0495612_0170029 3300053078 Bacteria 954
261 Ga0500583_0242238 3300053092 Bacteria 891
262 Ga0500640_000154 3300053095 Bacteria 13658
263 Ga0500558_150753 3300053106 Bacteria 864
264 Ga0500560_115827 3300053107 Bacteria 899
265 Ga0500572_057048 3300053111 Bacteria 1178
266 Ga0500573_0121917 3300053140 Bacteria 1450
267 Ga0500573_0248826 3300053140 Bacteria 917
268 Ga0500600_0062716 3300053149 Bacteria 2066
269 Ga0466962_0003561 3300061719 Bacteria 7416
270 Ga0466962_0132017 3300061719 Bacteria 1207
271 2997602563 2997600082 Bacteria 9896405
272 2547407229 2547132111 Bacteria 8013147
273 2585307780 2582581313 Bacteria 10042643
274 2585318392 2582581314 Bacteria 11452267
275 2616699370 2616644814 Bacteria 11555299
276 2644267138 2643221647 Bacteria 10741251
277 2644442251 2643221678 Bacteria 9540101
278 2784590725 2784132148 Bacteria 8627943
279 2785340832 2784746763 Bacteria 9783172
280 2785371932 2784746768 Bacteria 10036182
281 2786673039 2786546132 Bacteria 10419719
282 2793981154 2791355406 Bacteria 11364898
283 2804848263 2802429296 Bacteria 7227771
284 2808844438 2808606359 Bacteria 9866990
285 2808914017 2808606375 Bacteria 9466072
286 2809234431 2808606448 Bacteria 8656184
287 2812355588 2811994879 Bacteria 9313447
288 2812478431 2811994917 Bacteria 7761064
289 2852641647 2852635781 Bacteria 8251373
290 2862182396 2862178590 Bacteria 8583590
291 2862284247 2862281513 Bacteria 9621493
292 2862294743 2862290372 Bacteria 7471434
293 2862388956 2862382967 Bacteria 10317375
294 2862510527 2862507626 Bacteria 9425308
295 2862577112 2862574272 Bacteria 10567477
296 2863409007 2863404153 Bacteria 9672205
297 2867437785 2867428634 Bacteria 9590268
298 2873153726 2873151551 Bacteria 8625867
299 2877678650 2877676314 Bacteria 9512378
300 2912717223 2912715099 Bacteria 9460473
301 2912729813 2912723979 Bacteria 8557534
302 2919474073 2919468124 Bacteria 9133025
303 2946070220 2946064051 Bacteria 8957905
304 2947226593 2947224130 Bacteria 9938529
305 2954010707 2954002825 Bacteria 9173742
306 2954383614 2954380949 Bacteria 10050426
307 2954679353 2954673503 Bacteria 9685905
308 2954684802 2954682443 Bacteria 9862841
309 2954694405 2954691527 Bacteria 10720516
310 2954709607 2954701450 Bacteria 10834262
311 2954713906 2954711539 Bacteria 10867210
312 2954723873 2954721474 Bacteria 10456478
313 2954737962 2954731030 Bacteria 10243860
314 2954742774 2954740390 Bacteria 10229294
315 2954756820 2954749733 Bacteria 10366972
316 2954761735 2954759201 Bacteria 9358192
317 2990067349 2990059506 Bacteria 9321252
318 2997455001 2997451912 Bacteria 8492419
319 3006394333 3006393351 Bacteria 6615579
320 3006501518 3006493962 Bacteria 8825450
321 8008563162 8008558824 Bacteria 10610750
322 8008576799 8008574985 Bacteria 7815457
323 8023627675 8023623736 Bacteria 8593882
324 8025417871 8025413630 Bacteria 7014048
325 8025478511 8025478263 Bacteria 8209203
326 8047895719 8047893842 Bacteria 11723082
327 8048128500 8048127548 Bacteria 11053136
328 8048363220 8048356638 Bacteria 11044339
329 8048372743 8048369669 Bacteria 11666822
330 8048381677 8048379754 Bacteria 11877923
331 8054163982 8054160619 Bacteria 7783213
332 8056451396 8056447290 Bacteria 7680491
333 8056669354 8056667051 Bacteria 6953971
334 8056830139 8056829672 Bacteria 9045328
335 JGI24739J22299_10041478
336 JGI24737J22298_10042299
337 JGI24735J21928_10036435
338 rootH1_10061537
339 rootH1_10092348
340 rootH1_10000485
341 rootH1_10010837
342 JGI25160J50197_1010438
343 JGI25160J50197_1043958
344 JGI25160J50197_1052597
345 Ga0006562J51391_1166950
346 Ga0081455_10127894
347 Ga0075365_10109860
348 Ga0075367_10071617
349 Ga0099826_10275525
350 Ga0105244_10152021
351 Ga0157369_10352324
352 Ga0157372_10124277
353 Ga0182007_10000101
354 Ga0182005_1015235
355 Ga0183367_1019
356 Ga0207696_1094373
357 Ga0207647_10053846
358 Ga0209371_1003823
359 Ga0307517_10029578
360 Ga0307515_10010525
361 Ga0307515_10167687
362 Ga0307515_10388988
363 Ga0268256_1026148
364 Ga0307511_10008445
365 Ga0307512_10014324
366 Ga0307512_10078105
367 Ga0307513_10076798
368 Ga0307509_10054575
369 Ga0307508_10029837
370 Ga0307508_10051752
371 Ga0307508_10116003
372 Ga0307508_10260148
373 Ga0307514_10050814
374 Ga0307514_10124064
375 Ga0307516_10060826
376 Ga0307516_10127093
377 Ga0307518_10142000
378 Ga0307518_10285187
379 Ga0307507_10136011
380 Ga0307507_10299220
381 Ga0307510_10158406
382 Ga0307510_10192670
383 Ga0307510_10438590
384 Ga0395900_0182704
385 Ga0395898_0006034
386 Ga0395898_0028130
387 Ga0395905_0650933
388 Ga0439436_0002037
389 Ga0439436_0002667
390 Ga0439439_0029958
391 Ga0439439_0054481
392 Ga0451802_0313481
393 Ga0451853_0740374
394 Ga0451853_1501221
395 Ga0439433_0013873
396 Ga0439433_0052565
397 Ga0439448_0022457
398 Ga0439449_0005372
399 Ga0439457_012512
400 Ga0439457_020491
401 Ga0439462_0098081
402 Ga0450894_000742
403 Ga0439458_0018457
404 Ga0439458_0066277
405 Ga0466969_0144291
406 Ga0466969_0168335
407 Ga0466972_0033007
408 Ga0466972_0258192
409 Ga0466965_0002468
410 Ga0466965_0167571
411 Ga0466966_0012872
412 Ga0466961_0000460
413 Ga0466961_0056770
414 Ga0466961_0340533
415 Ga0466963_0008410
416 Ga0466963_0014990
417 Ga0466964_0004668
418 Ga0466971_0013886
419 Ga0466968_0017666
420 Ga0466968_0486034
421 Ga0466970_0023638
422 Ga0466970_0200162
423 Ga0466957_0000184
424 Ga0466959_0000481
425 Ga0466958_0009020
426 Ga0466958_0255287
427 Ga0466967_0123836
428 Ga0466967_0557554
429 Ga0495617_017814
430 Ga0495592_0112440
431 Ga0495592_0225263
432 Ga0495603_0030320
433 Ga0495603_0059797
434 Ga0495603_0109039
435 Ga0495603_0232916
436 Ga0495629_0108951
437 Ga0495629_0121016
438 Ga0495629_0158660
439 Ga0495629_0292085
440 Ga0495629_0302426
441 Ga0495629_0567707
442 Ga0495638_0092747
443 Ga0495651_0239738
444 Ga0495580_0110887
445 Ga0495582_0310934
446 Ga0495605_0002672
447 Ga0495639_0007350
448 Ga0495662_0006779
449 Ga0495662_0040752
450 Ga0495662_0056293
451 Ga0495662_0133604
452 Ga0495664_0000591
453 Ga0495664_0135463
454 Ga0495585_0022977
455 Ga0495585_0263732
456 Ga0495594_0015782
457 Ga0495594_0081854
458 Ga0495594_0350888
459 Ga0495607_0144928
460 Ga0495583_0057811
461 Ga0495583_0083635
462 Ga0495616_0022167
463 Ga0495618_0292003
464 Ga0495618_0331975
465 Ga0495620_0072286
466 Ga0495620_0080881
467 Ga0495628_0039115
468 Ga0495628_0111897
469 Ga0495631_0005908
470 Ga0495652_0035810
471 Ga0495652_0304584
472 Ga0495652_0360818
473 Ga0495640_0035312
474 Ga0495640_0452169
475 Ga0495586_0072104
476 Ga0495587_0076213
477 Ga0495609_0096776
478 Ga0495597_0198853
479 Ga0495645_0460803
480 Ga0495622_0036033
481 Ga0495633_0019088
482 Ga0495668_0057235
483 Ga0495611_0150993
484 Ga0495611_0199495
485 Ga0495625_0018796
486 Ga0495625_0166519
487 Ga0495625_0400570
488 Ga0495635_0003082
489 Ga0495635_0322064
490 Ga0495588_0080367
491 Ga0495588_0109669
492 Ga0495657_0038259
493 Ga0495657_0104260
494 Ga0495657_0118558
495 Ga0495657_0134716
496 Ga0495623_0226728
497 Ga0495646_0000577
498 Ga0495613_0055738
499 Ga0495613_0074351
500 Ga0495613_0088303
501 Ga0495613_0119031
502 Ga0495613_0151393
503 Ga0495613_0325787
504 Ga0495613_0340598
505 Ga0495624_0114766
506 Ga0495624_0267161
507 Ga0495624_0346033
508 Ga0495670_0272151
509 Ga0495649_0125743
510 Ga0495649_0158193
511 Ga0495589_0034095
512 Ga0495589_0037189
513 Ga0495589_0080423
514 Ga0495589_0166914
515 Ga0495589_0189217
516 Ga0495600_0005086
517 Ga0495581_0005618
518 Ga0495581_0305320
519 Ga0495581_0353905
520 Ga0495581_0395542
521 Ga0495604_0048301
522 Ga0495604_0050353
523 Ga0495636_0026139
524 Ga0495636_0066887
525 Ga0495636_0133186
526 Ga0495636_0163260
527 Ga0495674_0237515
528 Ga0495674_0427601
529 Ga0495672_0110999
530 Ga0495676_0194822
531 Ga0495676_0285834
532 Ga0495676_0317861
533 Ga0495676_0347760
534 Ga0495680_0154040
535 Ga0495683_0125058
536 Ga0495683_0125746
537 Ga0495687_002591
538 Ga0495687_030814
539 Ga0495687_066150
540 Ga0495687_092946
541 Ga0495687_139710
542 Ga0495675_0011785
543 Ga0495675_0154797
544 Ga0495677_0130172
545 Ga0495685_003616
546 Ga0495685_029418
547 Ga0495685_054622
548 Ga0495685_096480
549 Ga0495685_101229
550 Ga0495685_112501
551 Ga0495685_117291
552 Ga0495681_0020936
553 Ga0495684_0208153
554 Ga0495593_0006205
555 Ga0495593_0064206
556 Ga0495614_0061004
557 Ga0495614_0198743
558 Ga0495678_085094
559 Ga0501032_0118380
560 Ga0501033_0208934
561 Ga0501033_0366620
562 Ga0501034_0073106
563 Ga0501034_0176999
564 Ga0501034_0509380
565 Ga0501036_0020597
566 Ga0501036_0137070
567 Ga0501037_0027964
568 Ga0501038_0026013
569 Ga0501039_0396281
570 Ga0501043_0042828
571 Ga0501046_0130620
572 Ga0501046_0349157
573 Ga0501047_0036744
574 Ga0501047_0087101
575 Ga0501048_0031167
576 Ga0501067_0225018
577 Ga0501070_0381347
578 Ga0501070_0554589
579 Ga0501070_0576227
580 Ga0501235_009496
581 Ga0501282_001618
582 Ga0501035_0145128
583 Ga0501035_0337718
584 Ga0501035_0348494
585 Ga0501044_0029681
586 Ga0501044_0092368
587 Ga0501044_0126523
588 Ga0501044_0172710
589 Ga0501045_0199955
590 nmdc:mga0yw44_77436_c1
591 nmdc:mga06z11_68315_c1
592 nmdc:mga07m45_206048_c1
593 Ga0495612_0170029
594 Ga0500583_0242238
595 Ga0500640_000154
596 Ga0500558_150753
597 Ga0500560_115827
598 Ga0500572_057048
599 Ga0500573_0121917
600 Ga0500573_0248826
601 Ga0500600_0062716
602 Ga0466962_0003561
603 Ga0466962_0132017
604 2997602563
605 2547407229
606 2585307780
607 2585318392
608 2616699370
609 2644267138
610 2644442251
611 2784590725
612 2785340832
613 2785371932
614 2786673039
615 2793981154
616 2804848263
617 2808844438
618 2808914017
619 2809234431
620 2812355588
621 2812478431
622 2852641647
623 2862182396
624 2862284247
625 2862294743
626 2862388956
627 2862510527
628 2862577112
629 2863409007
630 2867437785
631 2873153726
632 2877678650
633 2912717223
634 2912729813
635 2919474073
636 2946070220
637 2947226593
638 2954010707
639 2954383614
640 2954679353
641 2954684802
642 2954694405
643 2954709607
644 2954713906
645 2954723873
646 2954737962
647 2954742774
648 2954756820
649 2954761735
650 2990067349
651 2997455001
652 3006394333
653 3006501518
654 8008563162
655 8008576799
656 8023627675
657 8025417871
658 8025478511
659 8047895719
660 8048128500
661 8048363220
662 8048372743
663 8048381677
664 8054163982
665 8056451396
666 8056669354
667 8056830139

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

23

133

0.93

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

136

250

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nys-assembly1.cif.gz_A x-ray structure of the k185a mutant of wbpe (wlbe) from pseudomonas aeruginosa in complex with plp at 1.45 angstrom resolution 0.9023 2 210
3frk-assembly1.cif.gz_B x-ray structure of qdtb from t. thermosaccharolyticum in complex with a plp:tdp-3-aminoquinovose aldimine 0.9022 2 211
7b0d-assembly1.cif.gz_B sugar transaminase from archaeoglobus veneficus 0.9001 2 215
4qgr-assembly1.cif.gz_B crystal structure of a degt dnrj eryc1 strs aminotransferase from brucella abortus 0.9001 2 214
7n63-assembly1.cif.gz_A-2 x-ray structure of hcan_0200, an aminotransferase from helicobacter canadensis in complex with its external aldimine 0.8974 2 211
ID Description Score Start End Superfamily
5w70B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9848 2 90 3.40.640.10
5w71B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9834 2 90 3.40.640.10
4k2bA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9738 2 90 3.40.640.10
3bn1B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.972 2 91 3.40.640.10
1b9iA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9716 2 91 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A7V4MR77-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.992 2 90 GO:0000271
GO:0008483
GO:0030170
AF-A0A401MAB0-F1-model_v4 Pleiotropic regulatory protein 0.9898 1 220 GO:0000271
GO:0008483
GO:0017000
GO:0030170
AF-A0A7C4A8H2-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9889 2 91 GO:0000271
GO:0008483
GO:0030170
AF-A0A2M8Q735-F1-model_v4 Aminotransferase DegT 0.9869 2 87 GO:0000271
GO:0008483
GO:0030170
AF-A0A7V8WD87-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9856 2 91 GO:0000271
GO:0008483
GO:0030170

Map