F411413

General Info

Members Datasets Scaffolds Average Seq Length
333 213 666 223

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100013394|Ga0307408_1000133943
Length 232
Sequence VARTPGRGRLVVFEGAEGVGKSTQIALLLDGLASAGVPHLALREPGGTALGDEIRRLLLDPARDDVTARAEALLFMASRAQLVEHEIRPALGRGETVVLDRFFLSTYAYQVAGRGLAEEDIRQANRFATGGLVPDLTLLLALAEGAGLARADARGGRDRMERSGDEFHRRVTAAFTRFASQEWQAAHPECGPIERVDASGSESDVRRRVADVLGSRWPETFDPLSRSHKSGY

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
3 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
77 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
78 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
123 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
124 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
125 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
126 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
127 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
128 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
129 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
130 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
131 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
132 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
133 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
134 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
135 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
136 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
137 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
138 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
139 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
140 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
141 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
142 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
143 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
144 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
145 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
146 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
147 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
148 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
149 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
150 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
151 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
152 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
153 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
154 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
155 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
156 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
157 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
158 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
159 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
160 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
161 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
162 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
163 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
164 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
165 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
166 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
167 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
168 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
169 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
170 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
171 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
172 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
173 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
174 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
175 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
176 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
177 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
178 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
179 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
180 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
181 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
182 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
183 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
184 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
185 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
186 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
187 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
188 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
189 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
190 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
191 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
192 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
193 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
194 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
195 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
196 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
197 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
198 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
200 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
203 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
204 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
205 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
206 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
207 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
208 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
209 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
210 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
211 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
212 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
213 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.7
Metatranscriptomes 0.3
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.3
Rhizosphere 98.8
Stem 0
Stem Tuber 0
Unclassified 15.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100013394 3300031548 Bacteria 5442
2 JGI24750J21931_1009656 3300002070 Bacteria 1246
3 Ga0058863_11851151 3300004799 Bacteria 2107
4 Ga0070658_10219861 3300005327 Bacteria 1606
5 Ga0070658_10358484 3300005327 Bacteria 1249
6 Ga0070683_100059533 3300005329 Bacteria 3549
7 Ga0070683_100165528 3300005329 Bacteria 2098
8 Ga0070683_100399689 3300005329 Unclassified 1310
9 Ga0070690_100009798 3300005330 Bacteria 5559
10 Ga0070670_100039370 3300005331 Bacteria 4065
11 Ga0070680_100000057 3300005336 Bacteria 57308
12 Ga0070680_100001545 3300005336 Bacteria 16796
13 Ga0070680_100004452 3300005336 Bacteria 10550
14 Ga0070680_100042699 3300005336 Bacteria 3680
15 Ga0070680_100109556 3300005336 Unclassified 2298
16 Ga0070680_100364262 3300005336 Bacteria 1230
17 Ga0070660_100023695 3300005339 Bacteria 4550
18 Ga0070661_100009718 3300005344 Bacteria 6672
19 Ga0070661_100134098 3300005344 Bacteria 1862
20 Ga0070668_100004588 3300005347 Bacteria 10237
21 Ga0070669_100017549 3300005353 Bacteria 5106
22 Ga0070669_100220555 3300005353 Unclassified 1499
23 Ga0070671_100071590 3300005355 Bacteria 2894
24 Ga0070671_100218581 3300005355 Bacteria 1617
25 Ga0070671_100378956 3300005355 Unclassified 1209
26 Ga0070674_100024694 3300005356 Bacteria 3904
27 Ga0070674_100132539 3300005356 Bacteria 1860
28 Ga0070674_100227888 3300005356 Bacteria 1453
29 Ga0070673_100024418 3300005364 Bacteria 4432
30 Ga0070659_100186883 3300005366 Bacteria 1702
31 Ga0070709_10127903 3300005434 Unclassified 1730
32 Ga0070714_100025195 3300005435 Bacteria 4908
33 Ga0070714_100249691 3300005435 Bacteria 1640
34 Ga0070714_100311089 3300005435 Unclassified 1471
35 Ga0070713_100000992 3300005436 Bacteria 18184
36 Ga0070713_100062086 3300005436 Unclassified 3129
37 Ga0070711_100156804 3300005439 Bacteria 1722
38 Ga0070711_100279977 3300005439 Unclassified 1319
39 Ga0070700_100009704 3300005441 Bacteria 5290
40 Ga0070694_100032971 3300005444 Bacteria 3404
41 Ga0070708_100000006 3300005445 Bacteria 150596
42 Ga0070708_100204769 3300005445 Bacteria 1848
43 Ga0070663_100028615 3300005455 Bacteria 3796
44 Ga0070681_10002813 3300005458 Bacteria 16066
45 Ga0070681_10019734 3300005458 Bacteria 6751
46 Ga0070681_10126699 3300005458 Bacteria 2486
47 Ga0070681_10193826 3300005458 Bacteria 1951
48 Ga0068867_100013749 3300005459 Bacteria 5731
49 Ga0070706_100108961 3300005467 Bacteria 2577
50 Ga0070707_101057982 3300005468 Unclassified 777
51 Ga0070679_100003303 3300005530 Bacteria 14766
52 Ga0070679_100003361 3300005530 Bacteria 14660
53 Ga0070679_100054461 3300005530 Bacteria 3982
54 Ga0070679_100057644 3300005530 Bacteria 3872
55 Ga0070679_100059120 3300005530 Bacteria 3820
56 Ga0070679_100063269 3300005530 Bacteria 3688
57 Ga0070679_100434034 3300005530 Unclassified 1259
58 Ga0070684_100119321 3300005535 Bacteria 2372
59 Ga0070684_100774875 3300005535 Unclassified 896
60 Ga0070684_100998544 3300005535 Unclassified 785
61 Ga0068853_100012026 3300005539 Bacteria 7040
62 Ga0068853_100432224 3300005539 Unclassified 1236
63 Ga0068853_100627943 3300005539 Bacteria 1021
64 Ga0070672_100042506 3300005543 Bacteria 3499
65 Ga0070686_100057538 3300005544 Bacteria 2498
66 Ga0070695_100045183 3300005545 Unclassified 2806
67 Ga0070696_100000058 3300005546 Bacteria 52810
68 Ga0070693_100008225 3300005547 Bacteria 5130
69 Ga0070665_100357504 3300005548 Unclassified 1466
70 Ga0068855_100015355 3300005563 Bacteria 9220
71 Ga0068855_100894830 3300005563 Bacteria 938
72 Ga0070664_100094819 3300005564 Bacteria 2588
73 Ga0070664_100609213 3300005564 Bacteria 1013
74 Ga0068857_100008912 3300005577 Bacteria 8691
75 Ga0068854_100020666 3300005578 Bacteria 4460
76 Ga0068856_100114865 3300005614 Bacteria 2691
77 Ga0068852_100175220 3300005616 Bacteria 2013
78 Ga0068864_100428076 3300005618 Unclassified 1262
79 Ga0068866_10088008 3300005718 Bacteria 1684
80 Ga0068861_100003989 3300005719 Bacteria 9887
81 Ga0068870_10024584 3300005840 Unclassified 2982
82 Ga0068863_100183736 3300005841 Bacteria 2008
83 Ga0068858_100218569 3300005842 Bacteria 1804
84 Ga0068862_100000229 3300005844 Bacteria 62419
85 Ga0068862_100468747 3300005844 Unclassified 1190
86 Ga0081539_10000075 3300005985 Bacteria 229419
87 Ga0070712_100001941 3300006175 Bacteria 12666
88 Ga0070712_100050451 3300006175 Bacteria 2895
89 Ga0075428_100004955 3300006844 Bacteria 14787
90 Ga0075428_100456273 3300006844 Unclassified 1369
91 Ga0075430_100003318 3300006846 Bacteria 13491
92 Ga0075430_100148609 3300006846 Bacteria 1951
93 Ga0075431_100454704 3300006847 Bacteria 1276
94 Ga0075433_10008719 3300006852 Bacteria 8093
95 Ga0075434_100006998 3300006871 Bacteria 10400
96 Ga0075434_100836549 3300006871 Unclassified 936
97 Ga0075435_100094938 3300007076 Bacteria 2466
98 Ga0105240_10059165 3300009093 Bacteria 4783
99 Ga0105240_10170404 3300009093 Unclassified 2579
100 Ga0105240_10173705 3300009093 Bacteria 2549
101 Ga0111539_10054897 3300009094 Bacteria 4738
102 Ga0111539_10072758 3300009094 Bacteria 4054
103 Ga0114129_11056994 3300009147 Bacteria 1019
104 Ga0105241_10127112 3300009174 Bacteria 2060
105 Ga0105242_10019094 3300009176 Bacteria 5369
106 Ga0105238_10009821 3300009551 Bacteria 9584
107 Ga0105238_10022185 3300009551 Bacteria 6473
108 Ga0105249_10000179 3300009553 Bacteria 74358
109 Ga0105249_10005273 3300009553 Bacteria 11157
110 Ga0105239_10077118 3300010375 Bacteria 3667
111 Ga0105239_10408083 3300010375 Unclassified 1538
112 Ga0157373_10033552 3300013100 Bacteria 3692
113 Ga0157373_10334874 3300013100 Bacteria 1078
114 Ga0157370_10007535 3300013104 Bacteria 11823
115 Ga0157369_10026120 3300013105 Bacteria 6479
116 Ga0157369_10403446 3300013105 Bacteria 1418
117 Ga0157374_10210458 3300013296 Bacteria 1906
118 Ga0157378_10008672 3300013297 Bacteria 8847
119 Ga0163162_10115932 3300013306 Bacteria 2779
120 Ga0157372_10022152 3300013307 Bacteria 6873
121 Ga0157372_10118343 3300013307 Bacteria 3040
122 Ga0157375_10008054 3300013308 Bacteria 9219
123 Ga0157375_10027760 3300013308 Bacteria 5295
124 Ga0157380_10068341 3300014326 Bacteria 2863
125 Ga0157380_11027732 3300014326 Bacteria 859
126 Ga0182008_10036767 3300014497 Bacteria 2450
127 Ga0182008_10095773 3300014497 Bacteria 1465
128 Ga0213876_10014938 3300021384 Bacteria 4116
129 Ga0207642_10207058 3300025899 Bacteria 1087
130 Ga0207699_10016635 3300025906 Bacteria 3852
131 Ga0207643_10041981 3300025908 Unclassified 2578
132 Ga0207705_10033592 3300025909 Bacteria 3666
133 Ga0207705_10379266 3300025909 Bacteria 1092
134 Ga0207684_10055712 3300025910 Unclassified 3354
135 Ga0207654_10121779 3300025911 Bacteria 1639
136 Ga0207707_10007747 3300025912 Bacteria 9350
137 Ga0207707_10007988 3300025912 Bacteria 9192
138 Ga0207707_10087875 3300025912 Bacteria 2715
139 Ga0207707_10098401 3300025912 Bacteria 2557
140 Ga0207695_10177602 3300025913 Bacteria 2051
141 Ga0207695_10467911 3300025913 Bacteria 1143
142 Ga0207693_10029976 3300025915 Bacteria 4294
143 Ga0207693_10082876 3300025915 Bacteria 2512
144 Ga0207663_10017578 3300025916 Bacteria 3988
145 Ga0207663_10105763 3300025916 Unclassified 1900
146 Ga0207660_10000331 3300025917 Bacteria 30542
147 Ga0207660_10008379 3300025917 Bacteria 6687
148 Ga0207660_10127827 3300025917 Bacteria 1931
149 Ga0207660_10188466 3300025917 Bacteria 1605
150 Ga0207660_10199388 3300025917 Bacteria 1563
151 Ga0207662_10003546 3300025918 Bacteria 8047
152 Ga0207657_10038491 3300025919 Bacteria 4257
153 Ga0207649_10026629 3300025920 Bacteria 3384
154 Ga0207649_10231846 3300025920 Unclassified 1321
155 Ga0207652_10005659 3300025921 Bacteria 10137
156 Ga0207652_10006508 3300025921 Bacteria 9416
157 Ga0207652_10007408 3300025921 Bacteria 8849
158 Ga0207652_10024151 3300025921 Bacteria 5042
159 Ga0207652_10043324 3300025921 Bacteria 3832
160 Ga0207652_10085149 3300025921 Bacteria 2770
161 Ga0207652_10163391 3300025921 Bacteria 1996
162 Ga0207652_10213956 3300025921 Unclassified 1736
163 Ga0207681_10001136 3300025923 Bacteria 17174
164 Ga0207681_10170923 3300025923 Bacteria 1647
165 Ga0207694_10084218 3300025924 Bacteria 2501
166 Ga0207650_10021663 3300025925 Bacteria 4542
167 Ga0207659_10165368 3300025926 Unclassified 1741
168 Ga0207700_10006395 3300025928 Bacteria 7110
169 Ga0207700_10018523 3300025928 Bacteria 4682
170 Ga0207700_10077208 3300025928 Unclassified 2587
171 Ga0207664_10374725 3300025929 Unclassified 1263
172 Ga0207664_10665270 3300025929 Bacteria 936
173 Ga0207644_10068992 3300025931 Bacteria 2581
174 Ga0207644_10497014 3300025931 Bacteria 1006
175 Ga0207690_10064309 3300025932 Bacteria 2505
176 Ga0207706_10048098 3300025933 Bacteria 3773
177 Ga0207686_10075511 3300025934 Bacteria 2182
178 Ga0207669_10081536 3300025937 Bacteria 2073
179 Ga0207691_10004568 3300025940 Bacteria 13404
180 Ga0207661_10021673 3300025944 Bacteria 4819
181 Ga0207661_10026996 3300025944 Bacteria 4382
182 Ga0207667_10085690 3300025949 Bacteria 3261
183 Ga0207651_10274461 3300025960 Bacteria 1390
184 Ga0207712_10002781 3300025961 Bacteria 11191
185 Ga0207712_10003602 3300025961 Bacteria 9769
186 Ga0207668_10008180 3300025972 Bacteria 6227
187 Ga0207668_10062484 3300025972 Unclassified 2622
188 Ga0207640_10045650 3300025981 Bacteria 2814
189 Ga0207639_10018378 3300026041 Bacteria 4966
190 Ga0207678_10023566 3300026067 Bacteria 5382
191 Ga0207702_10033778 3300026078 Bacteria 4274
192 Ga0207702_10498117 3300026078 Bacteria 1187
193 Ga0207641_10303104 3300026088 Bacteria 1510
194 Ga0207648_10008811 3300026089 Bacteria 9718
195 Ga0207674_10018479 3300026116 Bacteria 7576
196 Ga0207675_100052170 3300026118 Bacteria 3816
197 Ga0207698_10059803 3300026142 Bacteria 2960
198 Ga0207428_10079931 3300027907 Bacteria 2555
199 Ga0207428_10179248 3300027907 Unclassified 1601
200 Ga0268266_10048359 3300028379 Bacteria 3646
201 Ga0268265_10000907 3300028380 Bacteria 27403
202 Ga0268265_10230397 3300028380 Unclassified 1628
203 Ga0265332_10010499 3300031238 Bacteria 4122
204 Ga0265332_10029561 3300031238 Bacteria 2395
205 Ga0307405_10197383 3300031731 Unclassified 1458
206 Ga0307413_10003308 3300031824 Bacteria 6764
207 Ga0307413_10067044 3300031824 Bacteria 2242
208 Ga0307413_10096983 3300031824 Bacteria 1937
209 Ga0307413_10322253 3300031824 Unclassified 1181
210 Ga0307410_10004029 3300031852 Bacteria 7505
211 Ga0307410_10129789 3300031852 Bacteria 1850
212 Ga0307410_10617078 3300031852 Unclassified 906
213 Ga0307406_10005851 3300031901 Bacteria 6742
214 Ga0307406_10198341 3300031901 Bacteria 1475
215 Ga0307406_10295529 3300031901 Bacteria 1242
216 Ga0307407_10026990 3300031903 Bacteria 3049
217 Ga0307412_10001963 3300031911 Bacteria 11388
218 Ga0307412_10176819 3300031911 Bacteria 1601
219 Ga0307409_100051479 3300031995 Bacteria 3151
220 Ga0307416_100054269 3300032002 Bacteria 3220
221 Ga0307416_100147383 3300032002 Bacteria 2152
222 Ga0307416_100179196 3300032002 Bacteria 1984
223 Ga0307416_100331455 3300032002 Bacteria 1530
224 Ga0307416_100335931 3300032002 Bacteria 1521
225 Ga0307414_10151360 3300032004 Bacteria 1831
226 Ga0307411_10010371 3300032005 Bacteria 4962
227 Ga0307415_100451034 3300032126 Bacteria 1112
228 Ga0373926_0004201 3300035083 Bacteria 4703
229 Ga0373934_0007126 3300035086 Bacteria 4149
230 Ga0373923_0005363 3300035111 Bacteria 4351
231 Ga0373923_0107905 3300035111 Bacteria 1234
232 Ga0373936_0038085 3300035113 Unclassified 1922
233 Ga0373953_0008666 3300035117 Unclassified 3463
234 Ga0373957_0007921 3300035120 Unclassified 3420
235 Ga0373943_0013335 3300035170 Bacteria 3712
236 Ga0373946_0022415 3300035171 Bacteria 2458
237 Ga0373955_0005099 3300035172 Bacteria 5870
238 Ga0373924_0001195 3300035410 Bacteria 8333
239 Ga0373935_0005753 3300035692 Bacteria 7328
240 Ga0373927_0001092 3300035695 Bacteria 20629
241 Ga0373933_0001651 3300035724 Bacteria 12982
242 Ga0373947_0001983 3300035725 Bacteria 12529
243 Ga0373937_0000144 3300036401 Bacteria 68655
244 Ga0373937_0000650 3300036401 Bacteria 30511
245 Ga0373925_0005293 3300037068 Bacteria 9630
246 Ga0395905_0065583 3300037471 Bacteria 3400
247 Ga0436365_0295054 3300039437 Bacteria 6390
248 Ga0436365_1094984 3300039437 Bacteria 2840
249 Ga0439446_0076214 3300042156 Unclassified 1032
250 Ga0451577_0004294 3300042876 Bacteria 15133
251 Ga0451577_0006079 3300042876 Bacteria 12136
252 Ga0466966_0063904 3300044684 Unclassified 2318
253 Ga0466961_0034781 3300044693 Unclassified 3235
254 Ga0466959_0046807 3300045049 Bacteria 3183
255 Ga0466959_0121199 3300045049 Bacteria 1859
256 Ga0451576_0111443 3300045051 Bacteria 2848
257 Ga0451576_0140232 3300045051 Bacteria 2521
258 Ga0451576_0154144 3300045051 Bacteria 2396
259 Ga0466958_0048593 3300045836 Bacteria 2565
260 Ga0466967_0186106 3300045976 Bacteria 1961
261 Ga0466967_1137429 3300045976 Bacteria 778
262 Ga0495592_0038727 3300046454 Bacteria 3584
263 Ga0495603_0001731 3300046455 Bacteria 12857
264 Ga0495629_0055791 3300046459 Bacteria 2763
265 Ga0495629_0079556 3300046459 Unclassified 2289
266 Ga0495651_0017548 3300046462 Bacteria 5542
267 Ga0495651_0047786 3300046462 Bacteria 3306
268 Ga0495653_0076124 3300046463 Unclassified 2495
269 Ga0495580_0007005 3300046472 Bacteria 9090
270 Ga0495582_0003055 3300046473 Bacteria 9375
271 Ga0495639_0000419 3300046475 Bacteria 20264
272 Ga0495662_0164948 3300046476 Unclassified 1092
273 Ga0495664_0137195 3300046477 Unclassified 1482
274 Ga0495618_0089295 3300046514 Bacteria 1971
275 Ga0495628_0004617 3300046516 Bacteria 12174
276 Ga0495630_0003224 3300046517 Bacteria 11359
277 Ga0495630_0029319 3300046517 Bacteria 4091
278 Ga0495652_0009281 3300046529 Bacteria 8941
279 Ga0495652_0059472 3300046529 Unclassified 3233
280 Ga0495665_0001031 3300046531 Bacteria 14764
281 Ga0495586_0391993 3300046535 Bacteria 799
282 Ga0495587_0001063 3300046536 Bacteria 18054
283 Ga0495587_0003666 3300046536 Bacteria 10226
284 Ga0495587_0043201 3300046536 Bacteria 2685
285 Ga0495645_0002356 3300046543 Bacteria 12820
286 Ga0495645_0037036 3300046543 Unclassified 3555
287 Ga0495622_0211022 3300046557 Bacteria 863
288 Ga0495667_0010187 3300046559 Bacteria 6363
289 Ga0495635_0000671 3300046663 Bacteria 22005
290 Ga0495588_0000764 3300046674 Bacteria 14622
291 Ga0495657_0012148 3300046675 Bacteria 6406
292 Ga0495657_0110087 3300046675 Bacteria 1746
293 Ga0495623_0000690 3300046679 Bacteria 22439
294 Ga0495623_0010190 3300046679 Bacteria 6081
295 Ga0495646_0055310 3300046680 Unclassified 2383
296 Ga0495658_0000919 3300046683 Bacteria 15719
297 Ga0495613_0013238 3300046689 Bacteria 6131
298 Ga0495613_0031396 3300046689 Bacteria 3946
299 Ga0495600_0000492 3300046809 Bacteria 20419
300 Ga0495600_0149100 3300046809 Bacteria 1515
301 Ga0495600_0195966 3300046809 Unclassified 1298
302 Ga0495581_0001411 3300047315 Bacteria 13315
303 Ga0495604_0000528 3300047317 Bacteria 33758
304 Ga0495674_0018655 3300047319 Bacteria 6455
305 Ga0495680_0049672 3300047322 Bacteria 3284
306 Ga0495675_0005121 3300047444 Bacteria 7979
307 Ga0495684_0001711 3300047471 Bacteria 17655
308 Ga0495593_0003375 3300047673 Bacteria 9563
309 Ga0495614_0001349 3300048089 Bacteria 10588
310 Ga0496115_0075487 3300048918 Bacteria 2738
311 Ga0501033_0002587 3300049570 Bacteria 15255
312 Ga0501034_0244753 3300049571 Bacteria 1738
313 Ga0501036_0023653 3300049572 Bacteria 5177
314 Ga0501038_0039100 3300049574 Bacteria 4151
315 Ga0501047_0288245 3300049581 Bacteria 1486
316 Ga0501071_0588841 3300049587 Bacteria 855
317 Ga0501044_0020520 3300049823 Bacteria 7056
318 Ga0501044_0417710 3300049823 Bacteria 1252
319 nmdc:mga05p37_929964_c1 3300050507 Bacteria 933
320 nmdc:mga09592_71832_c1 3300050508 Bacteria 2938
321 nmdc:mga0qj67_1599_c1 3300050509 Bacteria 15932
322 nmdc:mga0qj67_44187_c1 3300050509 Bacteria 3510
323 nmdc:mga08y16_44380_c1 3300050511 Bacteria 4657
324 nmdc:mga08y16_76892_c1 3300050511 Bacteria 3479
325 nmdc:mga0n895_190744_c1 3300050512 Bacteria 2080
326 nmdc:mga0n895_208475_c1 3300050512 Bacteria 1985
327 nmdc:mga0n895_4029_c1 3300050512 Bacteria 11956
328 nmdc:mga0rr50_127940_c1 3300050513 Bacteria 2030
329 nmdc:mga0rr50_403944_c1 3300050513 Unclassified 1154
330 nmdc:mga0a205_9039_c1 3300050515 Bacteria 9083
331 Ga0495601_0022118 3300053077 Bacteria 3902
332 Ga0495595_0017760 3300053084 Unclassified 3065
333 Ga0590071_016747 3300059421 Unclassified 1720
334 Ga0307408_100013394
335 JGI24750J21931_1009656
336 Ga0058863_11851151
337 Ga0070658_10219861
338 Ga0070658_10358484
339 Ga0070683_100059533
340 Ga0070683_100165528
341 Ga0070683_100399689
342 Ga0070690_100009798
343 Ga0070670_100039370
344 Ga0070680_100000057
345 Ga0070680_100001545
346 Ga0070680_100004452
347 Ga0070680_100042699
348 Ga0070680_100109556
349 Ga0070680_100364262
350 Ga0070660_100023695
351 Ga0070661_100009718
352 Ga0070661_100134098
353 Ga0070668_100004588
354 Ga0070669_100017549
355 Ga0070669_100220555
356 Ga0070671_100071590
357 Ga0070671_100218581
358 Ga0070671_100378956
359 Ga0070674_100024694
360 Ga0070674_100132539
361 Ga0070674_100227888
362 Ga0070673_100024418
363 Ga0070659_100186883
364 Ga0070709_10127903
365 Ga0070714_100025195
366 Ga0070714_100249691
367 Ga0070714_100311089
368 Ga0070713_100000992
369 Ga0070713_100062086
370 Ga0070711_100156804
371 Ga0070711_100279977
372 Ga0070700_100009704
373 Ga0070694_100032971
374 Ga0070708_100000006
375 Ga0070708_100204769
376 Ga0070663_100028615
377 Ga0070681_10002813
378 Ga0070681_10019734
379 Ga0070681_10126699
380 Ga0070681_10193826
381 Ga0068867_100013749
382 Ga0070706_100108961
383 Ga0070707_101057982
384 Ga0070679_100003303
385 Ga0070679_100003361
386 Ga0070679_100054461
387 Ga0070679_100057644
388 Ga0070679_100059120
389 Ga0070679_100063269
390 Ga0070679_100434034
391 Ga0070684_100119321
392 Ga0070684_100774875
393 Ga0070684_100998544
394 Ga0068853_100012026
395 Ga0068853_100432224
396 Ga0068853_100627943
397 Ga0070672_100042506
398 Ga0070686_100057538
399 Ga0070695_100045183
400 Ga0070696_100000058
401 Ga0070693_100008225
402 Ga0070665_100357504
403 Ga0068855_100015355
404 Ga0068855_100894830
405 Ga0070664_100094819
406 Ga0070664_100609213
407 Ga0068857_100008912
408 Ga0068854_100020666
409 Ga0068856_100114865
410 Ga0068852_100175220
411 Ga0068864_100428076
412 Ga0068866_10088008
413 Ga0068861_100003989
414 Ga0068870_10024584
415 Ga0068863_100183736
416 Ga0068858_100218569
417 Ga0068862_100000229
418 Ga0068862_100468747
419 Ga0081539_10000075
420 Ga0070712_100001941
421 Ga0070712_100050451
422 Ga0075428_100004955
423 Ga0075428_100456273
424 Ga0075430_100003318
425 Ga0075430_100148609
426 Ga0075431_100454704
427 Ga0075433_10008719
428 Ga0075434_100006998
429 Ga0075434_100836549
430 Ga0075435_100094938
431 Ga0105240_10059165
432 Ga0105240_10170404
433 Ga0105240_10173705
434 Ga0111539_10054897
435 Ga0111539_10072758
436 Ga0114129_11056994
437 Ga0105241_10127112
438 Ga0105242_10019094
439 Ga0105238_10009821
440 Ga0105238_10022185
441 Ga0105249_10000179
442 Ga0105249_10005273
443 Ga0105239_10077118
444 Ga0105239_10408083
445 Ga0157373_10033552
446 Ga0157373_10334874
447 Ga0157370_10007535
448 Ga0157369_10026120
449 Ga0157369_10403446
450 Ga0157374_10210458
451 Ga0157378_10008672
452 Ga0163162_10115932
453 Ga0157372_10022152
454 Ga0157372_10118343
455 Ga0157375_10008054
456 Ga0157375_10027760
457 Ga0157380_10068341
458 Ga0157380_11027732
459 Ga0182008_10036767
460 Ga0182008_10095773
461 Ga0213876_10014938
462 Ga0207642_10207058
463 Ga0207699_10016635
464 Ga0207643_10041981
465 Ga0207705_10033592
466 Ga0207705_10379266
467 Ga0207684_10055712
468 Ga0207654_10121779
469 Ga0207707_10007747
470 Ga0207707_10007988
471 Ga0207707_10087875
472 Ga0207707_10098401
473 Ga0207695_10177602
474 Ga0207695_10467911
475 Ga0207693_10029976
476 Ga0207693_10082876
477 Ga0207663_10017578
478 Ga0207663_10105763
479 Ga0207660_10000331
480 Ga0207660_10008379
481 Ga0207660_10127827
482 Ga0207660_10188466
483 Ga0207660_10199388
484 Ga0207662_10003546
485 Ga0207657_10038491
486 Ga0207649_10026629
487 Ga0207649_10231846
488 Ga0207652_10005659
489 Ga0207652_10006508
490 Ga0207652_10007408
491 Ga0207652_10024151
492 Ga0207652_10043324
493 Ga0207652_10085149
494 Ga0207652_10163391
495 Ga0207652_10213956
496 Ga0207681_10001136
497 Ga0207681_10170923
498 Ga0207694_10084218
499 Ga0207650_10021663
500 Ga0207659_10165368
501 Ga0207700_10006395
502 Ga0207700_10018523
503 Ga0207700_10077208
504 Ga0207664_10374725
505 Ga0207664_10665270
506 Ga0207644_10068992
507 Ga0207644_10497014
508 Ga0207690_10064309
509 Ga0207706_10048098
510 Ga0207686_10075511
511 Ga0207669_10081536
512 Ga0207691_10004568
513 Ga0207661_10021673
514 Ga0207661_10026996
515 Ga0207667_10085690
516 Ga0207651_10274461
517 Ga0207712_10002781
518 Ga0207712_10003602
519 Ga0207668_10008180
520 Ga0207668_10062484
521 Ga0207640_10045650
522 Ga0207639_10018378
523 Ga0207678_10023566
524 Ga0207702_10033778
525 Ga0207702_10498117
526 Ga0207641_10303104
527 Ga0207648_10008811
528 Ga0207674_10018479
529 Ga0207675_100052170
530 Ga0207698_10059803
531 Ga0207428_10079931
532 Ga0207428_10179248
533 Ga0268266_10048359
534 Ga0268265_10000907
535 Ga0268265_10230397
536 Ga0265332_10010499
537 Ga0265332_10029561
538 Ga0307405_10197383
539 Ga0307413_10003308
540 Ga0307413_10067044
541 Ga0307413_10096983
542 Ga0307413_10322253
543 Ga0307410_10004029
544 Ga0307410_10129789
545 Ga0307410_10617078
546 Ga0307406_10005851
547 Ga0307406_10198341
548 Ga0307406_10295529
549 Ga0307407_10026990
550 Ga0307412_10001963
551 Ga0307412_10176819
552 Ga0307409_100051479
553 Ga0307416_100054269
554 Ga0307416_100147383
555 Ga0307416_100179196
556 Ga0307416_100331455
557 Ga0307416_100335931
558 Ga0307414_10151360
559 Ga0307411_10010371
560 Ga0307415_100451034
561 Ga0373926_0004201
562 Ga0373934_0007126
563 Ga0373923_0005363
564 Ga0373923_0107905
565 Ga0373936_0038085
566 Ga0373953_0008666
567 Ga0373957_0007921
568 Ga0373943_0013335
569 Ga0373946_0022415
570 Ga0373955_0005099
571 Ga0373924_0001195
572 Ga0373935_0005753
573 Ga0373927_0001092
574 Ga0373933_0001651
575 Ga0373947_0001983
576 Ga0373937_0000144
577 Ga0373937_0000650
578 Ga0373925_0005293
579 Ga0395905_0065583
580 Ga0436365_0295054
581 Ga0436365_1094984
582 Ga0439446_0076214
583 Ga0451577_0004294
584 Ga0451577_0006079
585 Ga0466966_0063904
586 Ga0466961_0034781
587 Ga0466959_0046807
588 Ga0466959_0121199
589 Ga0451576_0111443
590 Ga0451576_0140232
591 Ga0451576_0154144
592 Ga0466958_0048593
593 Ga0466967_0186106
594 Ga0466967_1137429
595 Ga0495592_0038727
596 Ga0495603_0001731
597 Ga0495629_0055791
598 Ga0495629_0079556
599 Ga0495651_0017548
600 Ga0495651_0047786
601 Ga0495653_0076124
602 Ga0495580_0007005
603 Ga0495582_0003055
604 Ga0495639_0000419
605 Ga0495662_0164948
606 Ga0495664_0137195
607 Ga0495618_0089295
608 Ga0495628_0004617
609 Ga0495630_0003224
610 Ga0495630_0029319
611 Ga0495652_0009281
612 Ga0495652_0059472
613 Ga0495665_0001031
614 Ga0495586_0391993
615 Ga0495587_0001063
616 Ga0495587_0003666
617 Ga0495587_0043201
618 Ga0495645_0002356
619 Ga0495645_0037036
620 Ga0495622_0211022
621 Ga0495667_0010187
622 Ga0495635_0000671
623 Ga0495588_0000764
624 Ga0495657_0012148
625 Ga0495657_0110087
626 Ga0495623_0000690
627 Ga0495623_0010190
628 Ga0495646_0055310
629 Ga0495658_0000919
630 Ga0495613_0013238
631 Ga0495613_0031396
632 Ga0495600_0000492
633 Ga0495600_0149100
634 Ga0495600_0195966
635 Ga0495581_0001411
636 Ga0495604_0000528
637 Ga0495674_0018655
638 Ga0495680_0049672
639 Ga0495675_0005121
640 Ga0495684_0001711
641 Ga0495593_0003375
642 Ga0495614_0001349
643 Ga0496115_0075487
644 Ga0501033_0002587
645 Ga0501034_0244753
646 Ga0501036_0023653
647 Ga0501038_0039100
648 Ga0501047_0288245
649 Ga0501071_0588841
650 Ga0501044_0020520
651 Ga0501044_0417710
652 nmdc:mga05p37_929964_c1
653 nmdc:mga09592_71832_c1
654 nmdc:mga0qj67_1599_c1
655 nmdc:mga0qj67_44187_c1
656 nmdc:mga08y16_44380_c1
657 nmdc:mga08y16_76892_c1
658 nmdc:mga0n895_190744_c1
659 nmdc:mga0n895_208475_c1
660 nmdc:mga0n895_4029_c1
661 nmdc:mga0rr50_127940_c1
662 nmdc:mga0rr50_403944_c1
663 nmdc:mga0a205_9039_c1
664 Ga0495601_0022118
665 Ga0495595_0017760
666 Ga0590071_016747

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02223

Thymidylate_kin

Thymidylate kinase

13

199

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5h56-assembly1.cif.gz_B adp and dtdp bound crystal structure of thymidylate kinase (aq_969) from aquifex aeolicus vf5 0.9574 8 212
5xb5-assembly1.cif.gz_A crystal structure of r90a mutant of thymidylate kinase (aq_969) from aquifex aeolicus vf5 0.9564 8 211
5xbh-assembly1.cif.gz_B crystal structure of r145e mutant of thymidylate kinase (aq_969) from aquifex aeolicus vf5 0.9542 8 213
5xb5-assembly1.cif.gz_B crystal structure of r90a mutant of thymidylate kinase (aq_969) from aquifex aeolicus vf5 0.9533 8 212
3hjn-assembly1.cif.gz_B crystal structure of thymidylate kinase in complex with dtdp and adp from thermotoga maritima 0.9441 9 208
ID Description Score Start End Superfamily
2pbrA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9481 8 215 3.40.50.300
2pbrA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.934 8 215 3.40.50.300
5x7jB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9296 6 215 3.40.50.300
5x7jB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9206 6 215 3.40.50.300
3ld9C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9175 6 210 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A257RZB2-F1-model_v4 dTMP kinase (EC 2.7.4.9) 0.9882 5 185 GO:0004798
GO:0005524
GO:0005829
GO:0006227
GO:0006233
GO:0006235
AF-A0A660V5P1-F1-model_v4 dTMP kinase (EC 2.7.4.9) 0.9822 5 140 GO:0004798
GO:0005524
GO:0005829
GO:0006227
GO:0006233
GO:0006235
AF-A0A3D4R5F8-F1-model_v4 dTMP kinase (EC 2.7.4.9) 0.9745 5 150 GO:0004798
GO:0005524
GO:0005829
GO:0006227
GO:0006233
GO:0006235
AF-A0A1F8MNX2-F1-model_v4 dTMP kinase (EC 2.7.4.9) 0.9744 5 117 GO:0004798
GO:0005524
GO:0005829
GO:0006227
GO:0006233
GO:0006235
AF-A0A3B8PGB8-F1-model_v4 deleted 0.9725 5 146

Map