F411398

General Info

Members Datasets Scaffolds Average Seq Length
333 159 666 187

Family's Representative Sequence

Representative Sequence 3300026116|Ga0207674_10025566|Ga0207674_100255666
Length 213
Sequence VRVLTTASHPGPLTSASRVGLTAIKMPGRRESYAERRERRAAVDDPAVVLDAAARFLETRSRSVAEVRRRLTTAGYRSDLIDGAITRLSELGMLDDEAFARLWVESRDRARPRGERALRDELRLKGIDRSIVDLVLDERRATDVDAAMAPDRTAAERLLEKNARTLRRIADPRQRRQRAYALLARNGFDPETCREVAATVATMDDELDGDVPA

Samples

Sample ID Description Type Environment
1 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
103 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
104 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
105 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
108 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
109 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
112 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.3
Nodule 0
Rhizoplane 10.81
Rhizosphere 88.29
Stem 0
Stem Tuber 0
Unclassified 10.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207674_10025566 3300026116 Bacteria 6292
2 rootH2_10016923 3300003320 Bacteria 1418
3 rootL2_10319559 3300003322 Bacteria 1078
4 Ga0070683_100936028 3300005329 Unclassified 831
5 Ga0068869_100228212 3300005334 Bacteria 1479
6 Ga0068869_100299541 3300005334 Bacteria 1298
7 Ga0070680_100357849 3300005336 Bacteria 1241
8 Ga0070680_100636315 3300005336 Bacteria 916
9 Ga0068868_101129593 3300005338 Unclassified 722
10 Ga0070687_100118975 3300005343 Bacteria 1508
11 Ga0070692_10071143 3300005345 Bacteria 1853
12 Ga0070674_100009354 3300005356 Bacteria 5867
13 Ga0070674_100095824 3300005356 Bacteria 2152
14 Ga0070673_100154119 3300005364 Bacteria 1948
15 Ga0070673_100991259 3300005364 Unclassified 782
16 Ga0070703_10007153 3300005406 Bacteria 3133
17 Ga0070709_10205417 3300005434 Bacteria 1397
18 Ga0070705_100107924 3300005440 Bacteria 1772
19 Ga0070705_100426069 3300005440 Bacteria 989
20 Ga0070700_100149304 3300005441 Bacteria 1597
21 Ga0070694_100154131 3300005444 Bacteria 1680
22 Ga0070694_100487693 3300005444 Unclassified 979
23 Ga0070708_100005501 3300005445 Bacteria 10043
24 Ga0070708_100018154 3300005445 Bacteria 5885
25 Ga0070708_100022424 3300005445 Bacteria 5357
26 Ga0070708_100056771 3300005445 Bacteria 3484
27 Ga0068867_100031139 3300005459 Bacteria 3850
28 Ga0070706_100003888 3300005467 Bacteria 14576
29 Ga0070706_100028067 3300005467 Bacteria 5179
30 Ga0070706_100038444 3300005467 Bacteria 4416
31 Ga0070706_100088081 3300005467 Bacteria 2878
32 Ga0070706_100197037 3300005467 Bacteria 1881
33 Ga0070707_100002015 3300005468 Bacteria 19451
34 Ga0070707_100013341 3300005468 Bacteria 7686
35 Ga0070707_100032247 3300005468 Bacteria 4991
36 Ga0070707_100068694 3300005468 Bacteria 3411
37 Ga0070698_100005135 3300005471 Bacteria 14329
38 Ga0070698_100021861 3300005471 Bacteria 6699
39 Ga0070698_100117528 3300005471 Bacteria 2621
40 Ga0070698_100170480 3300005471 Bacteria 2118
41 Ga0070699_100029160 3300005518 Bacteria 4758
42 Ga0070699_100192319 3300005518 Unclassified 1813
43 Ga0070699_100203945 3300005518 Bacteria 1759
44 Ga0070699_100220629 3300005518 Bacteria 1689
45 Ga0070699_100457347 3300005518 Bacteria 1157
46 Ga0070699_100682047 3300005518 Bacteria 938
47 Ga0070697_100013801 3300005536 Bacteria 6337
48 Ga0070697_100061212 3300005536 Bacteria 3070
49 Ga0070697_100127402 3300005536 Bacteria 2133
50 Ga0070697_100150899 3300005536 Bacteria 1958
51 Ga0070697_100695873 3300005536 Unclassified 897
52 Ga0068853_100458057 3300005539 Bacteria 1200
53 Ga0070686_100040773 3300005544 Bacteria 2898
54 Ga0070686_100160982 3300005544 Bacteria 1581
55 Ga0070695_100058840 3300005545 Bacteria 2486
56 Ga0070695_100101238 3300005545 Bacteria 1941
57 Ga0070695_100120172 3300005545 Bacteria 1796
58 Ga0070695_100281683 3300005545 Bacteria 1222
59 Ga0070695_100697758 3300005545 Bacteria 805
60 Ga0070696_100000309 3300005546 Bacteria 29644
61 Ga0070696_100012933 3300005546 Bacteria 5605
62 Ga0070696_100245848 3300005546 Unclassified 1351
63 Ga0070696_100480180 3300005546 Bacteria 985
64 Ga0070693_100368900 3300005547 Unclassified 987
65 Ga0070704_100259674 3300005549 Bacteria 1430
66 Ga0070704_100623354 3300005549 Bacteria 950
67 Ga0070704_100807426 3300005549 Bacteria 839
68 Ga0068857_100873194 3300005577 Bacteria 861
69 Ga0068856_100737590 3300005614 Bacteria 1005
70 Ga0070702_100011769 3300005615 Bacteria 4362
71 Ga0070702_100050197 3300005615 Bacteria 2382
72 Ga0068852_100901056 3300005616 Bacteria 901
73 Ga0068864_100016334 3300005618 Bacteria 6178
74 Ga0068864_100201030 3300005618 Bacteria 1830
75 Ga0068864_100716262 3300005618 Bacteria 978
76 Ga0068861_100484486 3300005719 Bacteria 1115
77 Ga0068863_100116359 3300005841 Bacteria 2548
78 Ga0068863_100133959 3300005841 Bacteria 2367
79 Ga0068863_100623111 3300005841 Bacteria 1069
80 Ga0068858_100178451 3300005842 Bacteria 2005
81 Ga0068858_100288085 3300005842 Bacteria 1565
82 Ga0068858_100349347 3300005842 Bacteria 1416
83 Ga0068858_100358175 3300005842 Bacteria 1398
84 Ga0068858_100483590 3300005842 Unclassified 1195
85 Ga0068860_100288006 3300005843 Bacteria 1607
86 Ga0068860_100473917 3300005843 Bacteria 1247
87 Ga0068860_100650504 3300005843 Unclassified 1062
88 Ga0097621_100294016 3300006237 Bacteria 1433
89 Ga0097621_100359980 3300006237 Bacteria 1296
90 Ga0075433_10126169 3300006852 Bacteria 2273
91 Ga0075433_10167626 3300006852 Bacteria 1954
92 Ga0075433_10497215 3300006852 Bacteria 1073
93 Ga0075434_100540187 3300006871 Bacteria 1186
94 Ga0068865_100200192 3300006881 Bacteria 1550
95 Ga0075436_100398462 3300006914 Bacteria 997
96 Ga0075436_100491474 3300006914 Bacteria 897
97 Ga0075435_100151513 3300007076 Bacteria 1950
98 Ga0075435_100274021 3300007076 Bacteria 1440
99 Ga0075435_100775749 3300007076 Bacteria 834
100 Ga0111539_10006242 3300009094 Bacteria 15380
101 Ga0105245_10043771 3300009098 Bacteria 3994
102 Ga0105245_10159502 3300009098 Bacteria 2139
103 Ga0105245_10367796 3300009098 Bacteria 1429
104 Ga0105245_10622307 3300009098 Unclassified 1108
105 Ga0105245_10758241 3300009098 Bacteria 1007
106 Ga0114129_10415840 3300009147 Bacteria 1770
107 Ga0114129_11015658 3300009147 Bacteria 1043
108 Ga0105243_10019238 3300009148 Bacteria 5178
109 Ga0105243_10475793 3300009148 Bacteria 1178
110 Ga0105241_10698689 3300009174 Bacteria 926
111 Ga0105242_10101693 3300009176 Bacteria 2436
112 Ga0105242_10285895 3300009176 Bacteria 1500
113 Ga0105242_10542162 3300009176 Bacteria 1114
114 Ga0105248_10317223 3300009177 Bacteria 1755
115 Ga0105249_10142220 3300009553 Bacteria 2302
116 Ga0105249_10250232 3300009553 Bacteria 1757
117 Ga0105239_10151190 3300010375 Bacteria 2591
118 Ga0105239_10597491 3300010375 Bacteria 1259
119 Ga0105239_11781020 3300010375 Bacteria 713
120 Ga0105246_10117987 3300011119 Bacteria 1961
121 Ga0157374_10879052 3300013296 Unclassified 913
122 Ga0157374_11132102 3300013296 Bacteria 803
123 Ga0157378_10023462 3300013297 Bacteria 5429
124 Ga0157378_10032331 3300013297 Bacteria 4623
125 Ga0163162_11508091 3300013306 Bacteria 766
126 Ga0157375_10254378 3300013308 Bacteria 1918
127 Ga0157375_10438375 3300013308 Bacteria 1472
128 Ga0163163_10034644 3300014325 Bacteria 4892
129 Ga0163163_10115644 3300014325 Bacteria 2713
130 Ga0163163_10211174 3300014325 Bacteria 1990
131 Ga0163163_10599593 3300014325 Bacteria 1165
132 Ga0157380_10556179 3300014326 Bacteria 1126
133 Ga0182008_10219155 3300014497 Bacteria 973
134 Ga0157377_10052486 3300014745 Bacteria 2302
135 Ga0157377_10230597 3300014745 Bacteria 1190
136 Ga0157379_10117650 3300014968 Bacteria 2391
137 Ga0157379_10120834 3300014968 Bacteria 2356
138 Ga0157376_10154818 3300014969 Bacteria 2071
139 Ga0157376_10661201 3300014969 Bacteria 1046
140 Ga0163161_10096764 3300017792 Bacteria 2192
141 Ga0207642_10011142 3300025899 Bacteria 3197
142 Ga0207680_10190871 3300025903 Bacteria 1391
143 Ga0207645_10016357 3300025907 Bacteria 4911
144 Ga0207643_10021036 3300025908 Bacteria 3583
145 Ga0207684_10002414 3300025910 Bacteria 18845
146 Ga0207684_10083326 3300025910 Bacteria 2723
147 Ga0207684_10175167 3300025910 Unclassified 1849
148 Ga0207684_10353544 3300025910 Bacteria 1265
149 Ga0207684_10411420 3300025910 Bacteria 1162
150 Ga0207660_10403356 3300025917 Unclassified 1101
151 Ga0207662_10100915 3300025918 Bacteria 1788
152 Ga0207649_10347928 3300025920 Bacteria 1096
153 Ga0207652_10107159 3300025921 Bacteria 2475
154 Ga0207646_10002605 3300025922 Bacteria 21235
155 Ga0207646_10003007 3300025922 Bacteria 19437
156 Ga0207646_10008988 3300025922 Bacteria 9935
157 Ga0207646_10181021 3300025922 Unclassified 1904
158 Ga0207646_10364632 3300025922 Unclassified 1305
159 Ga0207687_10179337 3300025927 Bacteria 1640
160 Ga0207687_10397007 3300025927 Bacteria 1133
161 Ga0207687_10681999 3300025927 Unclassified 871
162 Ga0207706_10016931 3300025933 Bacteria 6575
163 Ga0207686_10057888 3300025934 Bacteria 2441
164 Ga0207669_10002792 3300025937 Bacteria 7482
165 Ga0207689_10148338 3300025942 Bacteria 1933
166 Ga0207689_10262365 3300025942 Bacteria 1429
167 Ga0207667_10158579 3300025949 Bacteria 2328
168 Ga0207712_10057235 3300025961 Bacteria 2750
169 Ga0207677_10276794 3300026023 Bacteria 1376
170 Ga0207677_10629809 3300026023 Bacteria 944
171 Ga0207703_10291407 3300026035 Bacteria 1485
172 Ga0207703_10307519 3300026035 Bacteria 1448
173 Ga0207639_10303589 3300026041 Bacteria 1412
174 Ga0207708_10250090 3300026075 Bacteria 1428
175 Ga0207708_11099452 3300026075 Unclassified 693
176 Ga0207702_10445419 3300026078 Bacteria 1256
177 Ga0207648_10071226 3300026089 Bacteria 3030
178 Ga0207676_10661019 3300026095 Bacteria 1009
179 Ga0207675_100413465 3300026118 Bacteria 1331
180 Ga0207675_100710681 3300026118 Bacteria 1014
181 Ga0207683_10272384 3300026121 Bacteria 1546
182 Ga0207683_10443116 3300026121 Bacteria 1197
183 Ga0207428_10025758 3300027907 Bacteria 4918
184 Ga0268264_10574227 3300028381 Bacteria 1108
185 Ga0268264_10638315 3300028381 Bacteria 1053
186 Ga0268264_11205607 3300028381 Bacteria 766
187 Ga0307407_10499577 3300031903 Bacteria 891
188 Ga0307416_100318196 3300032002 Bacteria 1557
189 Ga0373960_0043333 3300035121 Bacteria 1310
190 Ga0373960_0169952 3300035121 Unclassified 755
191 Ga0373931_0070485 3300035691 Bacteria 1907
192 Ga0373931_0371343 3300035691 Bacteria 900
193 Ga0373935_0504297 3300035692 Unclassified 879
194 Ga0373947_0427263 3300035725 Unclassified 896
195 Ga0373937_0335815 3300036401 Bacteria 1431
196 Ga0395901_0323266 3300038443 Bacteria 1596
197 Ga0451793_1541135 3300041452 Bacteria 1459
198 Ga0439441_060227 3300042001 Bacteria 798
199 Ga0450910_015690 3300042147 Bacteria 1116
200 Ga0439435_0023943 3300042436 Bacteria 1607
201 Ga0451577_0258145 3300042876 Bacteria 1578
202 Ga0453683_0315965 3300044673 Unclassified 1000
203 Ga0495641_0221110 3300046461 Unclassified 850
204 Ga0495658_0140251 3300046683 Bacteria 1478
205 Ga0495680_0371764 3300047322 Unclassified 992
206 Ga0495680_0547273 3300047322 Unclassified 780
207 Ga0496100_0448428 3300048903 Unclassified 989
208 Ga0496101_0010453 3300048904 Bacteria 6130
209 Ga0496101_0502648 3300048904 Bacteria 958
210 Ga0496102_0075809 3300048905 Bacteria 3092
211 Ga0496102_0258732 3300048905 Bacteria 1641
212 Ga0496102_0432065 3300048905 Bacteria 1236
213 Ga0496102_0504807 3300048905 Bacteria 1132
214 Ga0496103_0483230 3300048906 Unclassified 793
215 Ga0496104_0012354 3300048907 Bacteria 7675
216 Ga0496104_0127062 3300048907 Bacteria 2448
217 Ga0496104_0400370 3300048907 Bacteria 1285
218 Ga0496105_0004326 3300048908 Bacteria 10700
219 Ga0496106_0453957 3300048909 Bacteria 1030
220 Ga0496107_0075178 3300048910 Bacteria 2459
221 Ga0496107_0481226 3300048910 Unclassified 921
222 Ga0496108_0007618 3300048911 Bacteria 8767
223 Ga0496109_0008330 3300048912 Bacteria 8803
224 Ga0496109_0039762 3300048912 Bacteria 4258
225 Ga0496109_0341343 3300048912 Bacteria 1414
226 Ga0496109_0371290 3300048912 Bacteria 1351
227 Ga0496110_0003293 3300048913 Bacteria 12326
228 Ga0496110_0053133 3300048913 Bacteria 3561
229 Ga0496110_0175337 3300048913 Bacteria 1946
230 Ga0496111_0016033 3300048914 Bacteria 5157
231 Ga0496111_0074400 3300048914 Bacteria 2474
232 Ga0496111_0142645 3300048914 Bacteria 1775
233 Ga0496112_0000010 3300048915 Bacteria 245046
234 Ga0496112_0072472 3300048915 Bacteria 3405
235 Ga0496112_0076092 3300048915 Bacteria 3320
236 Ga0496112_0139020 3300048915 Bacteria 2398
237 Ga0496112_0602777 3300048915 Bacteria 1030
238 Ga0496112_1202462 3300048915 Bacteria 675
239 Ga0496113_0104274 3300048916 Bacteria 2200
240 Ga0496114_0015495 3300048917 Bacteria 6129
241 Ga0496114_0284394 3300048917 Bacteria 1459
242 Ga0501031_0093976 3300049568 Bacteria 1957
243 Ga0501031_0129599 3300049568 Bacteria 1648
244 Ga0501036_0073784 3300049572 Bacteria 2885
245 Ga0501036_0084630 3300049572 Bacteria 2681
246 Ga0501036_0258258 3300049572 Bacteria 1460
247 Ga0501038_0270182 3300049574 Bacteria 1341
248 Ga0501039_0131396 3300049575 Bacteria 1965
249 Ga0501039_0272831 3300049575 Bacteria 1329
250 Ga0501039_0905836 3300049575 Bacteria 686
251 Ga0501040_0037648 3300049576 Bacteria 3287
252 Ga0501040_0158562 3300049576 Bacteria 1599
253 Ga0501041_0038243 3300049577 Bacteria 2909
254 Ga0501041_0101212 3300049577 Unclassified 1784
255 Ga0501041_0112552 3300049577 Bacteria 1689
256 Ga0501041_0169157 3300049577 Bacteria 1367
257 Ga0501046_0237533 3300049580 Bacteria 1345
258 Ga0501046_0246078 3300049580 Bacteria 1317
259 Ga0501046_0467055 3300049580 Bacteria 906
260 Ga0501048_0044697 3300049582 Bacteria 3165
261 Ga0501067_0444632 3300049583 Unclassified 724
262 Ga0501071_0038300 3300049587 Bacteria 3426
263 Ga0501071_0178386 3300049587 Bacteria 1591
264 Ga0501071_0220105 3300049587 Bacteria 1429
265 Ga0501071_0257643 3300049587 Bacteria 1317
266 Ga0501071_0708985 3300049587 Bacteria 775
267 Ga0501072_0012686 3300049588 Bacteria 6444
268 Ga0501072_0014026 3300049588 Bacteria 6142
269 Ga0501072_0131093 3300049588 Bacteria 1998
270 Ga0501072_0284840 3300049588 Bacteria 1314
271 Ga0501072_0579203 3300049588 Bacteria 885
272 Ga0501074_0208629 3300049590 Bacteria 1392
273 Ga0501075_0047552 3300049591 Bacteria 3224
274 Ga0501075_0165447 3300049591 Unclassified 1687
275 Ga0501075_0178233 3300049591 Bacteria 1622
276 Ga0501075_0273258 3300049591 Bacteria 1288
277 Ga0501075_0473874 3300049591 Bacteria 955
278 Ga0501076_0140176 3300049592 Bacteria 1964
279 Ga0501076_0140389 3300049592 Bacteria 1962
280 Ga0501076_0159572 3300049592 Bacteria 1837
281 Ga0501076_0280780 3300049592 Bacteria 1364
282 Ga0501076_0319024 3300049592 Bacteria 1275
283 Ga0501077_0063888 3300049593 Bacteria 2335
284 Ga0501077_0072756 3300049593 Bacteria 2178
285 Ga0501077_0721997 3300049593 Bacteria 640
286 Ga0501079_0013926 3300049741 Bacteria 6134
287 Ga0501079_0177003 3300049741 Bacteria 1664
288 Ga0501079_0262492 3300049741 Bacteria 1350
289 Ga0501079_0376862 3300049741 Unclassified 1112
290 Ga0501079_0379365 3300049741 Bacteria 1108
291 Ga0501080_0123176 3300049742 Bacteria 2402
292 Ga0501080_0247083 3300049742 Bacteria 1627
293 Ga0501081_0042575 3300049743 Bacteria 3112
294 Ga0501081_0270478 3300049743 Bacteria 1243
295 Ga0501081_0369823 3300049743 Bacteria 1058
296 Ga0501081_0447676 3300049743 Bacteria 959
297 Ga0501081_0513498 3300049743 Bacteria 893
298 Ga0501081_0812632 3300049743 Bacteria 704
299 Ga0501083_0455207 3300049744 Bacteria 833
300 Ga0501083_0535650 3300049744 Bacteria 762
301 Ga0501035_0173661 3300049822 Unclassified 1861
302 Ga0501035_0504705 3300049822 Bacteria 995
303 Ga0501044_0586738 3300049823 Bacteria 1009
304 Ga0501045_0006632 3300049824 Bacteria 8024
305 Ga0501045_0019356 3300049824 Bacteria 4852
306 Ga0501045_0131575 3300049824 Bacteria 1860
307 Ga0501045_0154479 3300049824 Bacteria 1707
308 nmdc:mga0yw44_459655_c1 3300050492 Unclassified 863
309 nmdc:mga05p37_504680_c1 3300050507 Bacteria 1387
310 nmdc:mga05p37_56438_c1 3300050507 Bacteria 4836
311 nmdc:mga0n895_598407_c1 3300050512 Bacteria 1105
312 nmdc:mga0n895_607943_c1 3300050512 Unclassified 1095
313 nmdc:mga0rr50_159603_c1 3300050513 Bacteria 1829
314 nmdc:mga08x19_62499_c1 3300050514 Bacteria 2414
315 nmdc:mga0a205_707675_c1 3300050515 Bacteria 857
316 nmdc:mga0a205_72552_c1 3300050515 Bacteria 3326
317 Ga0495612_0008694 3300053078 Bacteria 4118
318 Ga0501084_0248930 3300054114 Bacteria 1500
319 Ga0501084_0331038 3300054114 Bacteria 1286
320 Ga0501084_0359083 3300054114 Bacteria 1231
321 Ga0501084_0542845 3300054114 Unclassified 982
322 Ga0501084_0756576 3300054114 Bacteria 819
323 Ga0590071_004643 3300059421 Bacteria 3322
324 Ga0590075_024337 3300059424 Bacteria 1519
325 Ga0501082_0028216 3300060353 Bacteria 4836
326 Ga0501082_0086123 3300060353 Bacteria 2710
327 Ga0501082_0627011 3300060353 Bacteria 941
328 Ga0501082_0797565 3300060353 Bacteria 826
329 Ga0530510_0012690 3300061734 Bacteria 5925
330 Ga0530510_0090462 3300061734 Bacteria 2232
331 Ga0530510_0093447 3300061734 Bacteria 2196
332 Ga0530510_0301320 3300061734 Bacteria 1199
333 Ga0530510_0417706 3300061734 Bacteria 1012
334 Ga0207674_10025566
335 rootH2_10016923
336 rootL2_10319559
337 Ga0070683_100936028
338 Ga0068869_100228212
339 Ga0068869_100299541
340 Ga0070680_100357849
341 Ga0070680_100636315
342 Ga0068868_101129593
343 Ga0070687_100118975
344 Ga0070692_10071143
345 Ga0070674_100009354
346 Ga0070674_100095824
347 Ga0070673_100154119
348 Ga0070673_100991259
349 Ga0070703_10007153
350 Ga0070709_10205417
351 Ga0070705_100107924
352 Ga0070705_100426069
353 Ga0070700_100149304
354 Ga0070694_100154131
355 Ga0070694_100487693
356 Ga0070708_100005501
357 Ga0070708_100018154
358 Ga0070708_100022424
359 Ga0070708_100056771
360 Ga0068867_100031139
361 Ga0070706_100003888
362 Ga0070706_100028067
363 Ga0070706_100038444
364 Ga0070706_100088081
365 Ga0070706_100197037
366 Ga0070707_100002015
367 Ga0070707_100013341
368 Ga0070707_100032247
369 Ga0070707_100068694
370 Ga0070698_100005135
371 Ga0070698_100021861
372 Ga0070698_100117528
373 Ga0070698_100170480
374 Ga0070699_100029160
375 Ga0070699_100192319
376 Ga0070699_100203945
377 Ga0070699_100220629
378 Ga0070699_100457347
379 Ga0070699_100682047
380 Ga0070697_100013801
381 Ga0070697_100061212
382 Ga0070697_100127402
383 Ga0070697_100150899
384 Ga0070697_100695873
385 Ga0068853_100458057
386 Ga0070686_100040773
387 Ga0070686_100160982
388 Ga0070695_100058840
389 Ga0070695_100101238
390 Ga0070695_100120172
391 Ga0070695_100281683
392 Ga0070695_100697758
393 Ga0070696_100000309
394 Ga0070696_100012933
395 Ga0070696_100245848
396 Ga0070696_100480180
397 Ga0070693_100368900
398 Ga0070704_100259674
399 Ga0070704_100623354
400 Ga0070704_100807426
401 Ga0068857_100873194
402 Ga0068856_100737590
403 Ga0070702_100011769
404 Ga0070702_100050197
405 Ga0068852_100901056
406 Ga0068864_100016334
407 Ga0068864_100201030
408 Ga0068864_100716262
409 Ga0068861_100484486
410 Ga0068863_100116359
411 Ga0068863_100133959
412 Ga0068863_100623111
413 Ga0068858_100178451
414 Ga0068858_100288085
415 Ga0068858_100349347
416 Ga0068858_100358175
417 Ga0068858_100483590
418 Ga0068860_100288006
419 Ga0068860_100473917
420 Ga0068860_100650504
421 Ga0097621_100294016
422 Ga0097621_100359980
423 Ga0075433_10126169
424 Ga0075433_10167626
425 Ga0075433_10497215
426 Ga0075434_100540187
427 Ga0068865_100200192
428 Ga0075436_100398462
429 Ga0075436_100491474
430 Ga0075435_100151513
431 Ga0075435_100274021
432 Ga0075435_100775749
433 Ga0111539_10006242
434 Ga0105245_10043771
435 Ga0105245_10159502
436 Ga0105245_10367796
437 Ga0105245_10622307
438 Ga0105245_10758241
439 Ga0114129_10415840
440 Ga0114129_11015658
441 Ga0105243_10019238
442 Ga0105243_10475793
443 Ga0105241_10698689
444 Ga0105242_10101693
445 Ga0105242_10285895
446 Ga0105242_10542162
447 Ga0105248_10317223
448 Ga0105249_10142220
449 Ga0105249_10250232
450 Ga0105239_10151190
451 Ga0105239_10597491
452 Ga0105239_11781020
453 Ga0105246_10117987
454 Ga0157374_10879052
455 Ga0157374_11132102
456 Ga0157378_10023462
457 Ga0157378_10032331
458 Ga0163162_11508091
459 Ga0157375_10254378
460 Ga0157375_10438375
461 Ga0163163_10034644
462 Ga0163163_10115644
463 Ga0163163_10211174
464 Ga0163163_10599593
465 Ga0157380_10556179
466 Ga0182008_10219155
467 Ga0157377_10052486
468 Ga0157377_10230597
469 Ga0157379_10117650
470 Ga0157379_10120834
471 Ga0157376_10154818
472 Ga0157376_10661201
473 Ga0163161_10096764
474 Ga0207642_10011142
475 Ga0207680_10190871
476 Ga0207645_10016357
477 Ga0207643_10021036
478 Ga0207684_10002414
479 Ga0207684_10083326
480 Ga0207684_10175167
481 Ga0207684_10353544
482 Ga0207684_10411420
483 Ga0207660_10403356
484 Ga0207662_10100915
485 Ga0207649_10347928
486 Ga0207652_10107159
487 Ga0207646_10002605
488 Ga0207646_10003007
489 Ga0207646_10008988
490 Ga0207646_10181021
491 Ga0207646_10364632
492 Ga0207687_10179337
493 Ga0207687_10397007
494 Ga0207687_10681999
495 Ga0207706_10016931
496 Ga0207686_10057888
497 Ga0207669_10002792
498 Ga0207689_10148338
499 Ga0207689_10262365
500 Ga0207667_10158579
501 Ga0207712_10057235
502 Ga0207677_10276794
503 Ga0207677_10629809
504 Ga0207703_10291407
505 Ga0207703_10307519
506 Ga0207639_10303589
507 Ga0207708_10250090
508 Ga0207708_11099452
509 Ga0207702_10445419
510 Ga0207648_10071226
511 Ga0207676_10661019
512 Ga0207675_100413465
513 Ga0207675_100710681
514 Ga0207683_10272384
515 Ga0207683_10443116
516 Ga0207428_10025758
517 Ga0268264_10574227
518 Ga0268264_10638315
519 Ga0268264_11205607
520 Ga0307407_10499577
521 Ga0307416_100318196
522 Ga0373960_0043333
523 Ga0373960_0169952
524 Ga0373931_0070485
525 Ga0373931_0371343
526 Ga0373935_0504297
527 Ga0373947_0427263
528 Ga0373937_0335815
529 Ga0395901_0323266
530 Ga0451793_1541135
531 Ga0439441_060227
532 Ga0450910_015690
533 Ga0439435_0023943
534 Ga0451577_0258145
535 Ga0453683_0315965
536 Ga0495641_0221110
537 Ga0495658_0140251
538 Ga0495680_0371764
539 Ga0495680_0547273
540 Ga0496100_0448428
541 Ga0496101_0010453
542 Ga0496101_0502648
543 Ga0496102_0075809
544 Ga0496102_0258732
545 Ga0496102_0432065
546 Ga0496102_0504807
547 Ga0496103_0483230
548 Ga0496104_0012354
549 Ga0496104_0127062
550 Ga0496104_0400370
551 Ga0496105_0004326
552 Ga0496106_0453957
553 Ga0496107_0075178
554 Ga0496107_0481226
555 Ga0496108_0007618
556 Ga0496109_0008330
557 Ga0496109_0039762
558 Ga0496109_0341343
559 Ga0496109_0371290
560 Ga0496110_0003293
561 Ga0496110_0053133
562 Ga0496110_0175337
563 Ga0496111_0016033
564 Ga0496111_0074400
565 Ga0496111_0142645
566 Ga0496112_0000010
567 Ga0496112_0072472
568 Ga0496112_0076092
569 Ga0496112_0139020
570 Ga0496112_0602777
571 Ga0496112_1202462
572 Ga0496113_0104274
573 Ga0496114_0015495
574 Ga0496114_0284394
575 Ga0501031_0093976
576 Ga0501031_0129599
577 Ga0501036_0073784
578 Ga0501036_0084630
579 Ga0501036_0258258
580 Ga0501038_0270182
581 Ga0501039_0131396
582 Ga0501039_0272831
583 Ga0501039_0905836
584 Ga0501040_0037648
585 Ga0501040_0158562
586 Ga0501041_0038243
587 Ga0501041_0101212
588 Ga0501041_0112552
589 Ga0501041_0169157
590 Ga0501046_0237533
591 Ga0501046_0246078
592 Ga0501046_0467055
593 Ga0501048_0044697
594 Ga0501067_0444632
595 Ga0501071_0038300
596 Ga0501071_0178386
597 Ga0501071_0220105
598 Ga0501071_0257643
599 Ga0501071_0708985
600 Ga0501072_0012686
601 Ga0501072_0014026
602 Ga0501072_0131093
603 Ga0501072_0284840
604 Ga0501072_0579203
605 Ga0501074_0208629
606 Ga0501075_0047552
607 Ga0501075_0165447
608 Ga0501075_0178233
609 Ga0501075_0273258
610 Ga0501075_0473874
611 Ga0501076_0140176
612 Ga0501076_0140389
613 Ga0501076_0159572
614 Ga0501076_0280780
615 Ga0501076_0319024
616 Ga0501077_0063888
617 Ga0501077_0072756
618 Ga0501077_0721997
619 Ga0501079_0013926
620 Ga0501079_0177003
621 Ga0501079_0262492
622 Ga0501079_0376862
623 Ga0501079_0379365
624 Ga0501080_0123176
625 Ga0501080_0247083
626 Ga0501081_0042575
627 Ga0501081_0270478
628 Ga0501081_0369823
629 Ga0501081_0447676
630 Ga0501081_0513498
631 Ga0501081_0812632
632 Ga0501083_0455207
633 Ga0501083_0535650
634 Ga0501035_0173661
635 Ga0501035_0504705
636 Ga0501044_0586738
637 Ga0501045_0006632
638 Ga0501045_0019356
639 Ga0501045_0131575
640 Ga0501045_0154479
641 nmdc:mga0yw44_459655_c1
642 nmdc:mga05p37_504680_c1
643 nmdc:mga05p37_56438_c1
644 nmdc:mga0n895_598407_c1
645 nmdc:mga0n895_607943_c1
646 nmdc:mga0rr50_159603_c1
647 nmdc:mga08x19_62499_c1
648 nmdc:mga0a205_707675_c1
649 nmdc:mga0a205_72552_c1
650 Ga0495612_0008694
651 Ga0501084_0248930
652 Ga0501084_0331038
653 Ga0501084_0359083
654 Ga0501084_0542845
655 Ga0501084_0756576
656 Ga0590071_004643
657 Ga0590075_024337
658 Ga0501082_0028216
659 Ga0501082_0086123
660 Ga0501082_0627011
661 Ga0501082_0797565
662 Ga0530510_0012690
663 Ga0530510_0090462
664 Ga0530510_0093447
665 Ga0530510_0301320
666 Ga0530510_0417706

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02631

RecX_HTH2

RecX, second three-helix domain

95

136

0.97

PF21982

RecX_HTH1

RecX, first three-helix domain

50

88

0.97

PF21981

RecX_HTH3

RecX, third three-helix domain

151

196

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d5l-assembly2.cif.gz_B crystal structure of regulatory protein recx 0.8868 22 172
3e3v-assembly1.cif.gz_A crystal structure of recx from lactobacillus salivarius 0.8786 22 176
3c1d-assembly3.cif.gz_A x-ray crystal structure of recx 0.8422 22 172
3e3v-assembly1.cif.gz_A crystal structure of recx from lactobacillus salivarius 0.8368 22 176
3d5l-assembly1.cif.gz_A crystal structure of regulatory protein recx 0.8298 9 168
ID Description Score Start End Superfamily
af_Q2G2G9_1_107_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9646 22 70 1.10.10.10
3e3vA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9321 71 113 1.10.10.10
3dfgA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9127 25 69 1.10.10.10
3e3vA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9114 22 70 1.10.10.10
3d5lA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8991 71 114 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2E7QSS7-F1-model_v4 Regulatory protein RecX 0.9588 22 177 GO:0005737
GO:0006282
AF-A0A535W0Q8-F1-model_v4 Regulatory protein RecX 0.9579 1 182 GO:0005737
GO:0006282
AF-A0A3A4SDW9-F1-model_v4 Regulatory protein RecX 0.957 22 176 GO:0005737
GO:0006282
AF-A0A660UAY2-F1-model_v4 Regulatory protein RecX 0.9541 22 176 GO:0005737
GO:0006282
AF-A0A524PPF8-F1-model_v4 Regulatory protein RecX 0.9528 22 176 GO:0005737
GO:0006282

Map