F411272

General Info

Members Datasets Scaffolds Average Seq Length
333 205 666 327

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100135334|Ga0070698_1001353342
Length 384
Sequence MARMESDDVVSSSKKRKAPAILTLLTAIFVAVALASVRTAAADPNVDAKRAQAQDVLDQIHAIDSQLEVAVEAYNLANVKLDRIKADLELNARHLTIAKSSLHNAQTHLSARLVSLYVNGGEGNALEVMLGAKSLDDLLNRMDAVERVSDQDAKVLREVTRFRAEVKQRKLRLDRARTAQAQVVAQKEAQRRSIEGQLAERQRMLSSIKSEIASLEAAEQLRQRRLEDQARARLAAQSAQGQGFATDSQVVALGAASVDATLAPAPDARYGGVVGVAMQFLGTPYVWGGASPGGFDCSGLIMYAYGQMGVSLPHHAASQYSMGVPVSRDQLQAGDLVFFNGLSHAGIYIGGGQFIHAPHSGDVVKISSLSDSWYASTYYGARRL

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
4 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
54 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
77 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
115 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
118 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
119 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
120 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
121 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
122 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
123 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
130 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
131 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
132 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
135 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
136 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
137 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
138 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
139 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
140 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
141 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
142 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
143 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
144 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
145 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
146 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
147 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
148 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
149 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
150 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
151 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
152 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
153 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
154 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
166 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
167 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
168 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
182 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
183 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
184 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
185 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
186 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
187 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
188 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
189 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
190 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
191 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
192 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
193 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
194 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
197 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
198 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
199 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
200 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
201 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
202 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
203 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
204 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
205 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.4
Metatranscriptomes 0.6
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.3
Nodule 0
Rhizoplane 8.71
Rhizosphere 90.99
Stem 0
Stem Tuber 0
Unclassified 0.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100135334 3300005471 Bacteria 2418
2 JGI24739J22299_10037139 3300001989 Bacteria 1642
3 JGI24743J22301_10006996 3300001991 Bacteria 1943
4 JGI24738J21930_10012003 3300002075 Bacteria 1896
5 Ga0070658_10006462 3300005327 Bacteria 9500
6 Ga0070658_10012318 3300005327 Bacteria 6867
7 Ga0070683_100056807 3300005329 Bacteria 3635
8 Ga0070683_100079923 3300005329 Bacteria 3060
9 Ga0070683_100170882 3300005329 Bacteria 2063
10 Ga0070682_100004123 3300005337 Bacteria 8062
11 Ga0068868_100004540 3300005338 Bacteria 9743
12 Ga0070660_100017003 3300005339 Bacteria 5294
13 Ga0070660_100055099 3300005339 Bacteria 3072
14 Ga0070660_100088453 3300005339 Bacteria 2439
15 Ga0070689_100015515 3300005340 Bacteria 5557
16 Ga0070687_100132455 3300005343 Bacteria 1441
17 Ga0070661_100010160 3300005344 Bacteria 6538
18 Ga0070692_10047049 3300005345 Bacteria 2231
19 Ga0070669_100092618 3300005353 Bacteria 2268
20 Ga0070675_100038525 3300005354 Bacteria 3897
21 Ga0070675_100192106 3300005354 Bacteria 1769
22 Ga0070674_100014621 3300005356 Bacteria 4883
23 Ga0070674_100105172 3300005356 Bacteria 2063
24 Ga0070674_100123238 3300005356 Bacteria 1922
25 Ga0070673_100022744 3300005364 Bacteria 4568
26 Ga0070688_100201188 3300005365 Bacteria 1393
27 Ga0070659_100017432 3300005366 Bacteria 5406
28 Ga0070659_100110829 3300005366 Bacteria 2215
29 Ga0070714_100072131 3300005435 Bacteria 2989
30 Ga0070713_100084874 3300005436 Bacteria 2711
31 Ga0070701_10033261 3300005438 Bacteria 2575
32 Ga0070705_100015247 3300005440 Bacteria 3968
33 Ga0070700_100032681 3300005441 Bacteria 3129
34 Ga0070708_100009821 3300005445 Bacteria 7727
35 Ga0070663_100113605 3300005455 Bacteria 2038
36 Ga0070678_100148430 3300005456 Bacteria 1885
37 Ga0070662_100084450 3300005457 Bacteria 2371
38 Ga0070681_10074316 3300005458 Bacteria 3360
39 Ga0070681_10096012 3300005458 Bacteria 2912
40 Ga0070681_10113180 3300005458 Bacteria 2653
41 Ga0068867_100026371 3300005459 Bacteria 4172
42 Ga0068867_100132418 3300005459 Bacteria 1939
43 Ga0070706_100087143 3300005467 Bacteria 2894
44 Ga0070699_100150808 3300005518 Bacteria 2056
45 Ga0070679_100153379 3300005530 Bacteria 2280
46 Ga0070684_100002415 3300005535 Bacteria 13774
47 Ga0070684_100017120 3300005535 Bacteria 5941
48 Ga0070684_100066502 3300005535 Bacteria 3164
49 Ga0070684_100155947 3300005535 Bacteria 2070
50 Ga0068853_100006057 3300005539 Bacteria 9568
51 Ga0070672_100027631 3300005543 Bacteria 4234
52 Ga0070672_100108580 3300005543 Bacteria 2259
53 Ga0070686_100065632 3300005544 Bacteria 2358
54 Ga0070693_100090964 3300005547 Bacteria 1839
55 Ga0068855_100043973 3300005563 Bacteria 5288
56 Ga0068855_100204254 3300005563 Bacteria 2223
57 Ga0070664_100096592 3300005564 Bacteria 2564
58 Ga0068857_100004642 3300005577 Bacteria 11637
59 Ga0068857_100050013 3300005577 Bacteria 3708
60 Ga0068854_100005167 3300005578 Bacteria 8230
61 Ga0068856_100054592 3300005614 Bacteria 3941
62 Ga0068856_100427596 3300005614 Bacteria 1344
63 Ga0070702_100135287 3300005615 Bacteria 1563
64 Ga0068852_100012672 3300005616 Bacteria 6413
65 Ga0068864_100216299 3300005618 Bacteria 1766
66 Ga0068866_10030140 3300005718 Bacteria 2600
67 Ga0068866_10095207 3300005718 Bacteria 1630
68 Ga0068870_10008928 3300005840 Bacteria 4531
69 Ga0068863_100054158 3300005841 Bacteria 3801
70 Ga0068858_100060321 3300005842 Bacteria 3506
71 Ga0068860_100086177 3300005843 Bacteria 2989
72 Ga0070717_10008012 3300006028 Bacteria 7873
73 Ga0075365_10035005 3300006038 Bacteria 3247
74 Ga0070712_100005437 3300006175 Bacteria 7888
75 Ga0070712_100124296 3300006175 Bacteria 1946
76 Ga0070712_100212077 3300006175 Bacteria 1528
77 Ga0068865_100014076 3300006881 Bacteria 5075
78 Ga0068865_100032749 3300006881 Bacteria 3475
79 Ga0105240_10031763 3300009093 Bacteria 6842
80 Ga0114129_10260932 3300009147 Bacteria 2322
81 Ga0105243_10004391 3300009148 Bacteria 11156
82 Ga0105241_10329420 3300009174 Bacteria 1319
83 Ga0105242_10014568 3300009176 Bacteria 6090
84 Ga0105248_10039248 3300009177 Bacteria 5302
85 Ga0105238_10143965 3300009551 Bacteria 2360
86 Ga0105249_10117907 3300009553 Bacteria 2518
87 Ga0105246_10111048 3300011119 Bacteria 2014
88 Ga0157371_10008889 3300013102 Bacteria 7955
89 Ga0157371_10059513 3300013102 Bacteria 2708
90 Ga0157370_10019625 3300013104 Bacteria 6771
91 Ga0157370_10022222 3300013104 Bacteria 6312
92 Ga0157369_10007592 3300013105 Bacteria 12476
93 Ga0157369_10016949 3300013105 Bacteria 8188
94 Ga0163162_10119318 3300013306 Bacteria 2740
95 Ga0157372_10036153 3300013307 Bacteria 5443
96 Ga0157372_10183266 3300013307 Bacteria 2424
97 Ga0157375_10006851 3300013308 Bacteria 9931
98 Ga0157375_10114701 3300013308 Bacteria 2796
99 Ga0157375_10150633 3300013308 Bacteria 2461
100 Ga0157380_10002422 3300014326 Bacteria 12568
101 Ga0157377_10106096 3300014745 Bacteria 1682
102 Ga0157379_10012557 3300014968 Bacteria 7399
103 Ga0157376_10005875 3300014969 Bacteria 8610
104 Ga0157376_10089629 3300014969 Bacteria 2660
105 Ga0206356_11343804 3300020070 Bacteria 1625
106 Ga0206353_10085037 3300020082 Bacteria 1571
107 Ga0207642_10075918 3300025899 Bacteria 1616
108 Ga0207688_10032552 3300025901 Bacteria 2882
109 Ga0207688_10045004 3300025901 Bacteria 2461
110 Ga0207688_10076446 3300025901 Bacteria 1906
111 Ga0207643_10081385 3300025908 Bacteria 1877
112 Ga0207705_10015537 3300025909 Bacteria 5463
113 Ga0207705_10104829 3300025909 Bacteria 2083
114 Ga0207684_10116319 3300025910 Bacteria 2291
115 Ga0207707_10074953 3300025912 Bacteria 2952
116 Ga0207693_10030829 3300025915 Bacteria 4235
117 Ga0207693_10149204 3300025915 Bacteria 1839
118 Ga0207660_10201638 3300025917 Bacteria 1554
119 Ga0207662_10035076 3300025918 Bacteria 2929
120 Ga0207657_10007253 3300025919 Bacteria 11384
121 Ga0207657_10073443 3300025919 Bacteria 2890
122 Ga0207657_10100579 3300025919 Bacteria 2400
123 Ga0207649_10066852 3300025920 Bacteria 2280
124 Ga0207694_10062228 3300025924 Bacteria 2906
125 Ga0207650_10073496 3300025925 Bacteria 2575
126 Ga0207659_10028125 3300025926 Bacteria 3817
127 Ga0207659_10147635 3300025926 Bacteria 1833
128 Ga0207664_10031340 3300025929 Bacteria 4067
129 Ga0207664_10059941 3300025929 Bacteria 3033
130 Ga0207664_10103145 3300025929 Bacteria 2360
131 Ga0207690_10201714 3300025932 Bacteria 1511
132 Ga0207706_10091577 3300025933 Bacteria 2673
133 Ga0207709_10059614 3300025935 Bacteria 2377
134 Ga0207709_10077277 3300025935 Bacteria 2134
135 Ga0207709_10303050 3300025935 Bacteria 1189
136 Ga0207669_10082876 3300025937 Bacteria 2060
137 Ga0207704_10120317 3300025938 Bacteria 1795
138 Ga0207665_10203848 3300025939 Bacteria 1442
139 Ga0207691_10057383 3300025940 Bacteria 3544
140 Ga0207691_10118049 3300025940 Bacteria 2353
141 Ga0207711_10083209 3300025941 Bacteria 2799
142 Ga0207689_10098444 3300025942 Bacteria 2403
143 Ga0207661_10029146 3300025944 Bacteria 4236
144 Ga0207661_10089229 3300025944 Bacteria 2564
145 Ga0207661_10145738 3300025944 Bacteria 2042
146 Ga0207679_10142449 3300025945 Bacteria 1940
147 Ga0207667_10297559 3300025949 Bacteria 1649
148 Ga0207651_10069025 3300025960 Bacteria 2494
149 Ga0207651_10070811 3300025960 Unclassified 2469
150 Ga0207640_10096713 3300025981 Bacteria 2059
151 Ga0207639_10121843 3300026041 Bacteria 2144
152 Ga0207678_10025282 3300026067 Bacteria 5184
153 Ga0207678_10030002 3300026067 Bacteria 4748
154 Ga0207702_10044498 3300026078 Bacteria 3731
155 Ga0207702_10390090 3300026078 Bacteria 1341
156 Ga0207648_10025286 3300026089 Bacteria 5291
157 Ga0207676_10135912 3300026095 Bacteria 2097
158 Ga0207674_10011587 3300026116 Bacteria 9903
159 Ga0207674_10079064 3300026116 Bacteria 3294
160 Ga0207674_10355495 3300026116 Bacteria 1416
161 Ga0207683_10246812 3300026121 Bacteria 1629
162 Ga0207698_10175924 3300026142 Bacteria 1890
163 Ga0207428_10052682 3300027907 Bacteria 3249
164 Ga0265338_10011615 3300028800 Bacteria 10149
165 Ga0307409_100022581 3300031995 Bacteria 4342
166 Ga0307409_100178652 3300031995 Bacteria 1876
167 Ga0307416_100025834 3300032002 Bacteria 4315
168 Ga0307416_100036048 3300032002 Bacteria 3788
169 Ga0307416_100301498 3300032002 Bacteria 1593
170 Ga0307415_100023991 3300032126 Bacteria 3800
171 Ga0373939_0021801 3300035114 Bacteria 1759
172 Ga0373960_0012989 3300035121 Bacteria 2080
173 Ga0373955_0061434 3300035172 Bacteria 2075
174 Ga0373942_0025686 3300035207 Bacteria 1520
175 Ga0373962_0008594 3300035242 Bacteria 2515
176 Ga0373937_0019999 3300036401 Bacteria 5997
177 Ga0395899_0040694 3300037312 Bacteria 3476
178 Ga0395899_0206504 3300037312 Bacteria 1367
179 Ga0395900_0204179 3300037418 Bacteria 1998
180 Ga0395898_0133254 3300037466 Bacteria 2379
181 Ga0395898_0227396 3300037466 Bacteria 1779
182 Ga0395898_0386702 3300037466 Bacteria 1334
183 Ga0395905_0087705 3300037471 Bacteria 2917
184 Ga0395901_0042267 3300038443 Bacteria 4725
185 Ga0395901_0102711 3300038443 Bacteria 3000
186 Ga0395901_0114668 3300038443 Bacteria 2830
187 Ga0395901_0283185 3300038443 Bacteria 1722
188 Ga0439461_0007026 3300041410 Bacteria 1981
189 Ga0451807_2145425 3300041486 Bacteria 1502
190 Ga0439446_0012926 3300042156 Bacteria 2285
191 Ga0466963_0045789 3300044694 Bacteria 2882
192 Ga0466963_0122789 3300044694 Bacteria 1788
193 Ga0495592_0034239 3300046454 Bacteria 3829
194 Ga0495603_0027563 3300046455 Bacteria 3428
195 Ga0495603_0028177 3300046455 Bacteria 3388
196 Ga0495653_0026316 3300046463 Bacteria 4666
197 Ga0495653_0109108 3300046463 Bacteria 1992
198 Ga0495582_0010046 3300046473 Bacteria 5210
199 Ga0495608_0094385 3300046511 Bacteria 1933
200 Ga0495630_0011555 3300046517 Bacteria 6393
201 Ga0495652_0068552 3300046529 Bacteria 2971
202 Ga0495652_0080233 3300046529 Bacteria 2696
203 Ga0495665_0116163 3300046531 Bacteria 1402
204 Ga0495667_0016761 3300046559 Bacteria 4949
205 Ga0495656_0111555 3300046615 Bacteria 1280
206 Ga0495635_0078564 3300046663 Bacteria 2259
207 Ga0495635_0079580 3300046663 Bacteria 2243
208 Ga0495599_0023967 3300046678 Bacteria 3816
209 Ga0495623_0084636 3300046679 Bacteria 1957
210 Ga0495600_0083221 3300046809 Bacteria 2089
211 Ga0495581_0004250 3300047315 Bacteria 8258
212 Ga0495676_0056820 3300047321 Bacteria 3092
213 Ga0495680_0006904 3300047322 Bacteria 10477
214 Ga0495684_0031248 3300047471 Bacteria 4088
215 Ga0495602_0135320 3300048088 Bacteria 1959
216 Ga0496100_0145602 3300048903 Bacteria 1684
217 Ga0496101_0087859 3300048904 Bacteria 2308
218 Ga0496101_0200552 3300048904 Bacteria 1542
219 Ga0496102_0031125 3300048905 Bacteria 4784
220 Ga0496104_0001101 3300048907 Bacteria 23115
221 Ga0496104_0001456 3300048907 Bacteria 20455
222 Ga0496105_0011961 3300048908 Bacteria 6872
223 Ga0496105_0013573 3300048908 Bacteria 6470
224 Ga0496106_0012682 3300048909 Bacteria 6226
225 Ga0496107_0003446 3300048910 Bacteria 10570
226 Ga0496107_0076407 3300048910 Bacteria 2439
227 Ga0496108_0004941 3300048911 Bacteria 10771
228 Ga0496109_0010050 3300048912 Bacteria 8075
229 Ga0496109_0010238 3300048912 Bacteria 8009
230 Ga0496110_0000951 3300048913 Bacteria 20276
231 Ga0496110_0010588 3300048913 Bacteria 7509
232 Ga0496110_0062948 3300048913 Bacteria 3278
233 Ga0496111_0002184 3300048914 Bacteria 11720
234 Ga0496111_0139385 3300048914 Bacteria 1797
235 Ga0496112_0008773 3300048915 Bacteria 9071
236 Ga0496112_0018915 3300048915 Bacteria 6490
237 Ga0496112_0315616 3300048915 Bacteria 1508
238 Ga0496113_0003597 3300048916 Bacteria 9310
239 Ga0496113_0163974 3300048916 Bacteria 1758
240 Ga0496113_0205692 3300048916 Bacteria 1566
241 Ga0496114_0151583 3300048917 Bacteria 2011
242 Ga0496114_0325911 3300048917 Unclassified 1357
243 Ga0496115_0048145 3300048918 Bacteria 3409
244 Ga0501031_0009474 3300049568 Bacteria 6334
245 Ga0501031_0015601 3300049568 Bacteria 4932
246 Ga0501031_0048450 3300049568 Bacteria 2769
247 Ga0501031_0200882 3300049568 Bacteria 1301
248 Ga0501032_0004186 3300049569 Bacteria 10923
249 Ga0501032_0138585 3300049569 Bacteria 1603
250 Ga0501033_0028450 3300049570 Bacteria 4198
251 Ga0501033_0077520 3300049570 Bacteria 2439
252 Ga0501036_0003630 3300049572 Bacteria 12343
253 Ga0501036_0105079 3300049572 Bacteria 2388
254 Ga0501036_0223323 3300049572 Bacteria 1581
255 Ga0501038_0110822 3300049574 Bacteria 2274
256 Ga0501039_0055124 3300049575 Bacteria 3078
257 Ga0501039_0127725 3300049575 Bacteria 1994
258 Ga0501039_0157096 3300049575 Bacteria 1787
259 Ga0501040_0085874 3300049576 Bacteria 2184
260 Ga0501041_0007097 3300049577 Bacteria 6569
261 Ga0501041_0010016 3300049577 Bacteria 5584
262 Ga0501041_0030151 3300049577 Bacteria 3274
263 Ga0501041_0040980 3300049577 Bacteria 2812
264 Ga0501041_0045750 3300049577 Bacteria 2661
265 Ga0501042_0000614 3300049578 Bacteria 18996
266 Ga0501042_0019518 3300049578 Bacteria 4709
267 Ga0501043_0007115 3300049579 Bacteria 8903
268 Ga0501046_0018579 3300049580 Bacteria 5781
269 Ga0501046_0022344 3300049580 Bacteria 5211
270 Ga0501046_0085073 3300049580 Bacteria 2438
271 Ga0501047_0164045 3300049581 Bacteria 2093
272 Ga0501048_0003990 3300049582 Bacteria 11204
273 Ga0501048_0008911 3300049582 Bacteria 7553
274 Ga0501048_0011254 3300049582 Bacteria 6672
275 Ga0501048_0036099 3300049582 Bacteria 3554
276 Ga0501048_0106925 3300049582 Bacteria 1975
277 Ga0501068_0004333 3300049584 Bacteria 7714
278 Ga0501069_0079159 3300049585 Bacteria 1849
279 Ga0501069_0098778 3300049585 Bacteria 1656
280 Ga0501070_0014401 3300049586 Bacteria 6654
281 Ga0501070_0017654 3300049586 Bacteria 5990
282 Ga0501071_0063564 3300049587 Bacteria 2676
283 Ga0501071_0104218 3300049587 Bacteria 2093
284 Ga0501072_0003386 3300049588 Bacteria 11996
285 Ga0501072_0020796 3300049588 Bacteria 5086
286 Ga0501072_0116933 3300049588 Bacteria 2124
287 Ga0501072_0158303 3300049588 Bacteria 1806
288 Ga0501073_0001011 3300049589 Bacteria 20308
289 Ga0501074_0022642 3300049590 Bacteria 4567
290 Ga0501074_0080485 3300049590 Bacteria 2337
291 Ga0501075_0001226 3300049591 Bacteria 16617
292 Ga0501075_0004840 3300049591 Bacteria 9167
293 Ga0501075_0040728 3300049591 Bacteria 3480
294 Ga0501076_0001810 3300049592 Bacteria 14505
295 Ga0501076_0061187 3300049592 Bacteria 2996
296 Ga0501076_0075025 3300049592 Bacteria 2710
297 Ga0501076_0130870 3300049592 Bacteria 2035
298 Ga0501077_0010540 3300049593 Bacteria 5755
299 Ga0501079_0013250 3300049741 Bacteria 6286
300 Ga0501079_0059693 3300049741 Bacteria 2941
301 Ga0501079_0072082 3300049741 Bacteria 2669
302 Ga0501080_0002374 3300049742 Bacteria 16416
303 Ga0501080_0005005 3300049742 Bacteria 11804
304 Ga0501080_0016137 3300049742 Bacteria 6894
305 Ga0501081_0003023 3300049743 Bacteria 10673
306 Ga0501081_0010224 3300049743 Bacteria 6124
307 Ga0501081_0100008 3300049743 Bacteria 2049
308 Ga0501081_0122858 3300049743 Bacteria 1850
309 Ga0501081_0196189 3300049743 Bacteria 1463
310 Ga0501035_0074572 3300049822 Bacteria 3001
311 Ga0501044_0021919 3300049823 Bacteria 6812
312 Ga0501044_0388945 3300049823 Bacteria 1309
313 Ga0501045_0006328 3300049824 Bacteria 8189
314 Ga0501045_0006944 3300049824 Bacteria 7847
315 Ga0501045_0030424 3300049824 Bacteria 3907
316 Ga0501045_0088457 3300049824 Bacteria 2288
317 nmdc:mga05p37_104549_c1 3300050507 Bacteria 3484
318 nmdc:mga0rr50_160371_c1 3300050513 Bacteria 1825
319 Ga0495601_0020437 3300053077 Bacteria 4045
320 Ga0495612_0020851 3300053078 Bacteria 2628
321 Ga0495595_0054347 3300053084 Bacteria 1862
322 Ga0495619_0023166 3300053085 Bacteria 3979
323 Ga0495619_0065145 3300053085 Bacteria 2430
324 Ga0501084_0027984 3300054114 Bacteria 4710
325 Ga0501084_0069062 3300054114 Bacteria 2958
326 Ga0501084_0083633 3300054114 Bacteria 2679
327 Ga0501084_0155341 3300054114 Bacteria 1929
328 Ga0501082_0003489 3300060353 Bacteria 13720
329 Ga0501082_0081457 3300060353 Bacteria 2793
330 Ga0501082_0169054 3300060353 Bacteria 1900
331 Ga0530510_0010376 3300061734 Bacteria 6531
332 Ga0530510_0096516 3300061734 Bacteria 2161
333 Ga0530510_0111058 3300061734 Bacteria 2008
334 Ga0070698_100135334
335 JGI24739J22299_10037139
336 JGI24743J22301_10006996
337 JGI24738J21930_10012003
338 Ga0070658_10006462
339 Ga0070658_10012318
340 Ga0070683_100056807
341 Ga0070683_100079923
342 Ga0070683_100170882
343 Ga0070682_100004123
344 Ga0068868_100004540
345 Ga0070660_100017003
346 Ga0070660_100055099
347 Ga0070660_100088453
348 Ga0070689_100015515
349 Ga0070687_100132455
350 Ga0070661_100010160
351 Ga0070692_10047049
352 Ga0070669_100092618
353 Ga0070675_100038525
354 Ga0070675_100192106
355 Ga0070674_100014621
356 Ga0070674_100105172
357 Ga0070674_100123238
358 Ga0070673_100022744
359 Ga0070688_100201188
360 Ga0070659_100017432
361 Ga0070659_100110829
362 Ga0070714_100072131
363 Ga0070713_100084874
364 Ga0070701_10033261
365 Ga0070705_100015247
366 Ga0070700_100032681
367 Ga0070708_100009821
368 Ga0070663_100113605
369 Ga0070678_100148430
370 Ga0070662_100084450
371 Ga0070681_10074316
372 Ga0070681_10096012
373 Ga0070681_10113180
374 Ga0068867_100026371
375 Ga0068867_100132418
376 Ga0070706_100087143
377 Ga0070699_100150808
378 Ga0070679_100153379
379 Ga0070684_100002415
380 Ga0070684_100017120
381 Ga0070684_100066502
382 Ga0070684_100155947
383 Ga0068853_100006057
384 Ga0070672_100027631
385 Ga0070672_100108580
386 Ga0070686_100065632
387 Ga0070693_100090964
388 Ga0068855_100043973
389 Ga0068855_100204254
390 Ga0070664_100096592
391 Ga0068857_100004642
392 Ga0068857_100050013
393 Ga0068854_100005167
394 Ga0068856_100054592
395 Ga0068856_100427596
396 Ga0070702_100135287
397 Ga0068852_100012672
398 Ga0068864_100216299
399 Ga0068866_10030140
400 Ga0068866_10095207
401 Ga0068870_10008928
402 Ga0068863_100054158
403 Ga0068858_100060321
404 Ga0068860_100086177
405 Ga0070717_10008012
406 Ga0075365_10035005
407 Ga0070712_100005437
408 Ga0070712_100124296
409 Ga0070712_100212077
410 Ga0068865_100014076
411 Ga0068865_100032749
412 Ga0105240_10031763
413 Ga0114129_10260932
414 Ga0105243_10004391
415 Ga0105241_10329420
416 Ga0105242_10014568
417 Ga0105248_10039248
418 Ga0105238_10143965
419 Ga0105249_10117907
420 Ga0105246_10111048
421 Ga0157371_10008889
422 Ga0157371_10059513
423 Ga0157370_10019625
424 Ga0157370_10022222
425 Ga0157369_10007592
426 Ga0157369_10016949
427 Ga0163162_10119318
428 Ga0157372_10036153
429 Ga0157372_10183266
430 Ga0157375_10006851
431 Ga0157375_10114701
432 Ga0157375_10150633
433 Ga0157380_10002422
434 Ga0157377_10106096
435 Ga0157379_10012557
436 Ga0157376_10005875
437 Ga0157376_10089629
438 Ga0206356_11343804
439 Ga0206353_10085037
440 Ga0207642_10075918
441 Ga0207688_10032552
442 Ga0207688_10045004
443 Ga0207688_10076446
444 Ga0207643_10081385
445 Ga0207705_10015537
446 Ga0207705_10104829
447 Ga0207684_10116319
448 Ga0207707_10074953
449 Ga0207693_10030829
450 Ga0207693_10149204
451 Ga0207660_10201638
452 Ga0207662_10035076
453 Ga0207657_10007253
454 Ga0207657_10073443
455 Ga0207657_10100579
456 Ga0207649_10066852
457 Ga0207694_10062228
458 Ga0207650_10073496
459 Ga0207659_10028125
460 Ga0207659_10147635
461 Ga0207664_10031340
462 Ga0207664_10059941
463 Ga0207664_10103145
464 Ga0207690_10201714
465 Ga0207706_10091577
466 Ga0207709_10059614
467 Ga0207709_10077277
468 Ga0207709_10303050
469 Ga0207669_10082876
470 Ga0207704_10120317
471 Ga0207665_10203848
472 Ga0207691_10057383
473 Ga0207691_10118049
474 Ga0207711_10083209
475 Ga0207689_10098444
476 Ga0207661_10029146
477 Ga0207661_10089229
478 Ga0207661_10145738
479 Ga0207679_10142449
480 Ga0207667_10297559
481 Ga0207651_10069025
482 Ga0207651_10070811
483 Ga0207640_10096713
484 Ga0207639_10121843
485 Ga0207678_10025282
486 Ga0207678_10030002
487 Ga0207702_10044498
488 Ga0207702_10390090
489 Ga0207648_10025286
490 Ga0207676_10135912
491 Ga0207674_10011587
492 Ga0207674_10079064
493 Ga0207674_10355495
494 Ga0207683_10246812
495 Ga0207698_10175924
496 Ga0207428_10052682
497 Ga0265338_10011615
498 Ga0307409_100022581
499 Ga0307409_100178652
500 Ga0307416_100025834
501 Ga0307416_100036048
502 Ga0307416_100301498
503 Ga0307415_100023991
504 Ga0373939_0021801
505 Ga0373960_0012989
506 Ga0373955_0061434
507 Ga0373942_0025686
508 Ga0373962_0008594
509 Ga0373937_0019999
510 Ga0395899_0040694
511 Ga0395899_0206504
512 Ga0395900_0204179
513 Ga0395898_0133254
514 Ga0395898_0227396
515 Ga0395898_0386702
516 Ga0395905_0087705
517 Ga0395901_0042267
518 Ga0395901_0102711
519 Ga0395901_0114668
520 Ga0395901_0283185
521 Ga0439461_0007026
522 Ga0451807_2145425
523 Ga0439446_0012926
524 Ga0466963_0045789
525 Ga0466963_0122789
526 Ga0495592_0034239
527 Ga0495603_0027563
528 Ga0495603_0028177
529 Ga0495653_0026316
530 Ga0495653_0109108
531 Ga0495582_0010046
532 Ga0495608_0094385
533 Ga0495630_0011555
534 Ga0495652_0068552
535 Ga0495652_0080233
536 Ga0495665_0116163
537 Ga0495667_0016761
538 Ga0495656_0111555
539 Ga0495635_0078564
540 Ga0495635_0079580
541 Ga0495599_0023967
542 Ga0495623_0084636
543 Ga0495600_0083221
544 Ga0495581_0004250
545 Ga0495676_0056820
546 Ga0495680_0006904
547 Ga0495684_0031248
548 Ga0495602_0135320
549 Ga0496100_0145602
550 Ga0496101_0087859
551 Ga0496101_0200552
552 Ga0496102_0031125
553 Ga0496104_0001101
554 Ga0496104_0001456
555 Ga0496105_0011961
556 Ga0496105_0013573
557 Ga0496106_0012682
558 Ga0496107_0003446
559 Ga0496107_0076407
560 Ga0496108_0004941
561 Ga0496109_0010050
562 Ga0496109_0010238
563 Ga0496110_0000951
564 Ga0496110_0010588
565 Ga0496110_0062948
566 Ga0496111_0002184
567 Ga0496111_0139385
568 Ga0496112_0008773
569 Ga0496112_0018915
570 Ga0496112_0315616
571 Ga0496113_0003597
572 Ga0496113_0163974
573 Ga0496113_0205692
574 Ga0496114_0151583
575 Ga0496114_0325911
576 Ga0496115_0048145
577 Ga0501031_0009474
578 Ga0501031_0015601
579 Ga0501031_0048450
580 Ga0501031_0200882
581 Ga0501032_0004186
582 Ga0501032_0138585
583 Ga0501033_0028450
584 Ga0501033_0077520
585 Ga0501036_0003630
586 Ga0501036_0105079
587 Ga0501036_0223323
588 Ga0501038_0110822
589 Ga0501039_0055124
590 Ga0501039_0127725
591 Ga0501039_0157096
592 Ga0501040_0085874
593 Ga0501041_0007097
594 Ga0501041_0010016
595 Ga0501041_0030151
596 Ga0501041_0040980
597 Ga0501041_0045750
598 Ga0501042_0000614
599 Ga0501042_0019518
600 Ga0501043_0007115
601 Ga0501046_0018579
602 Ga0501046_0022344
603 Ga0501046_0085073
604 Ga0501047_0164045
605 Ga0501048_0003990
606 Ga0501048_0008911
607 Ga0501048_0011254
608 Ga0501048_0036099
609 Ga0501048_0106925
610 Ga0501068_0004333
611 Ga0501069_0079159
612 Ga0501069_0098778
613 Ga0501070_0014401
614 Ga0501070_0017654
615 Ga0501071_0063564
616 Ga0501071_0104218
617 Ga0501072_0003386
618 Ga0501072_0020796
619 Ga0501072_0116933
620 Ga0501072_0158303
621 Ga0501073_0001011
622 Ga0501074_0022642
623 Ga0501074_0080485
624 Ga0501075_0001226
625 Ga0501075_0004840
626 Ga0501075_0040728
627 Ga0501076_0001810
628 Ga0501076_0061187
629 Ga0501076_0075025
630 Ga0501076_0130870
631 Ga0501077_0010540
632 Ga0501079_0013250
633 Ga0501079_0059693
634 Ga0501079_0072082
635 Ga0501080_0002374
636 Ga0501080_0005005
637 Ga0501080_0016137
638 Ga0501081_0003023
639 Ga0501081_0010224
640 Ga0501081_0100008
641 Ga0501081_0122858
642 Ga0501081_0196189
643 Ga0501035_0074572
644 Ga0501044_0021919
645 Ga0501044_0388945
646 Ga0501045_0006328
647 Ga0501045_0006944
648 Ga0501045_0030424
649 Ga0501045_0088457
650 nmdc:mga05p37_104549_c1
651 nmdc:mga0rr50_160371_c1
652 Ga0495601_0020437
653 Ga0495612_0020851
654 Ga0495595_0054347
655 Ga0495619_0023166
656 Ga0495619_0065145
657 Ga0501084_0027984
658 Ga0501084_0069062
659 Ga0501084_0083633
660 Ga0501084_0155341
661 Ga0501082_0003489
662 Ga0501082_0081457
663 Ga0501082_0169054
664 Ga0530510_0010376
665 Ga0530510_0096516
666 Ga0530510_0111058

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00877

NLPC_P60

NlpC/P60 family

282

383

0.98

PF24568

97

170

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cfl-assembly4.cif.gz_D x-ray structure of autolysin acd24020 catalytic domain from clostridium difficile 0.937 215 328
7cfl-assembly1.cif.gz_A x-ray structure of autolysin acd24020 catalytic domain from clostridium difficile 0.9317 215 328
6biq-assembly5.cif.gz_D structure of nlpc2 from trichomonas vaginalis 0.9221 213 327
8i2f-assembly1.cif.gz_B crystal structure of bacillus subtilis lyte catalytic domain in complex with isea 0.9181 215 326
4hpe-assembly4.cif.gz_D crystal structure of a putative cell wall hydrolase (cd630_03720) from clostridium difficile 630 at 2.38 a resolution 0.906 215 328
ID Description Score Start End Superfamily
af_Q47151_26_234_3.90.1720.10 Alpha Beta;Alpha-Beta Complex;endopeptidase fold (from Nostoc punctiforme);endopeptidase domain like (from Nostoc punctiforme) 0.9163 215 317 3.90.1720.10
af_P23898_36_154_3.90.1720.10 Alpha Beta;Alpha-Beta Complex;endopeptidase fold (from Nostoc punctiforme);endopeptidase domain like (from Nostoc punctiforme) 0.8972 215 327 3.90.1720.10
af_P0AFV4_62_188_3.90.1720.10 Alpha Beta;Alpha-Beta Complex;endopeptidase fold (from Nostoc punctiforme);endopeptidase domain like (from Nostoc punctiforme) 0.8906 213 328 3.90.1720.10
3h41A03 Alpha Beta;Alpha-Beta Complex;endopeptidase fold (from Nostoc punctiforme);endopeptidase domain like (from Nostoc punctiforme) 0.8855 215 328 3.90.1720.10
af_P23898_36_154_3.90.1720.10 Alpha Beta;Alpha-Beta Complex;endopeptidase fold (from Nostoc punctiforme);endopeptidase domain like (from Nostoc punctiforme) 0.8477 215 327 3.90.1720.10
ID Description Score Start End GO Terms
AF-A0A2V6Q5B8-F1-model_v4 NlpC/P60 domain-containing protein 0.9896 215 328 GO:0008234
AF-A0A3D9T3V3-F1-model_v4 NlpC/P60 family protein 0.9789 215 327 GO:0006508
GO:0008234
AF-A0A7W5YC42-F1-model_v4 Cell wall-associated NlpC family hydrolase 0.9785 219 327 GO:0008234
AF-A0A7K0C0Z9-F1-model_v4 NlpC/P60 domain-containing protein 0.978 215 327 GO:0006508
GO:0008234
AF-A0A6H9YWK1-F1-model_v4 NlpC/P60 family protein 0.9778 215 327 GO:0008234

Map