F411058

General Info

Members Datasets Scaffolds Average Seq Length
332 250 664 301

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0000169|Ga0495638_0000169_95598_96629
Length 343
Sequence MKKVFRDMICKHSLIEDGFDKYYEKACASIADSMNMLPNPIPGDRDRTERREMVELAGVLAPRHGYNPTALDSVRILRTEAVLHDIPVLYKPGAVFVLQGSKQGILEGEVFRYDEEHYLAVSVPVPFRMESTASQERPLLAVYVEFDMQMAAEIAIQVEKHAELASDKPRGVVSSRMASDIEDVLLRLLMALRSTVDIAVLGASILRELHYRVLVGPQGGAMIAALQQKGPSGKLIQSLAWLRENYGSEIAVTDLAREVGMSVPSYHVHFKGLTGNSPMQYVKAMRLHEARLMIAGQSRTIAEVAASVGYASPAQFSRDFKRHFGRTASEEMKWVQYHLGEPA

Samples

Sample ID Description Type Environment
1 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
18 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
22 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
25 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
28 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
29 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
30 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
31 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
32 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
34 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
35 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
37 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
39 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
41 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
52 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
56 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
57 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
58 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
59 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
60 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
61 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
62 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
63 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
64 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
65 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
66 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
69 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
70 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
71 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
74 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
75 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
76 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
77 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
82 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
83 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
84 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
85 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
86 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
87 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
88 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
91 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
92 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
93 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
94 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
95 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
96 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
97 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
98 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
101 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
102 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
107 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
108 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
109 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
110 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
111 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
112 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
113 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
114 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
115 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
116 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
117 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
118 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
119 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
120 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
121 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
122 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
123 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
124 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
125 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
126 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
127 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
128 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
129 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
130 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
131 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
132 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
133 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
134 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
135 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
136 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
137 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
138 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
139 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
140 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
141 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
142 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
143 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
144 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
145 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
146 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
147 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
148 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
149 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
150 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
151 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
152 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
153 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
154 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
155 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
156 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
157 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
158 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
159 2643221607 Rhizobium sp. Root73 Isolate Unclassified
160 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
161 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
162 2738541293 Rhizobium sp. GV031 Isolate Unclassified
163 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
164 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
165 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
166 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
167 2802429633 Rhizobium anhuiense J3 Isolate Nodule
168 2802429634 Rhizobium anhuiense S10 Isolate Nodule
169 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
170 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
171 2802429637 Rhizobium anhuiense C15 Isolate Nodule
172 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
173 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
174 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
175 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
176 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
177 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
178 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
179 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
180 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
181 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
182 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
183 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
184 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
185 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
186 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
187 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
188 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
189 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
190 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
191 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
192 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
193 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
194 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
195 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
196 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
197 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
198 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
199 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
200 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
201 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
202 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
203 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
204 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
205 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
206 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
207 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
208 2876377896 Mesorhizobium sp. M2C.T.Ca.TU.009.01.2.1 Isolate Nodule
209 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
210 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
211 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
212 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
213 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
214 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
215 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
216 2922185730 Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 Isolate Nodule
217 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
218 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
219 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
220 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
221 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
222 2938014810 Mesorhizobium sp. M2C.T.Ca.TU.002.02.1.1 Isolate Nodule
223 2958100919 Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 Isolate Nodule
224 2958172287 Mesorhizobium sp. M2A.F.Ca.ET.029.05.1.1 Isolate Nodule
225 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
226 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
227 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
228 2979710463 Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 Isolate Nodule
229 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
230 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
231 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
232 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
233 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
234 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
235 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
236 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
237 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
238 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
239 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
240 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
241 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
242 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
243 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
244 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
245 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
246 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
247 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
248 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
249 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
250 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 63.55
Metatranscriptomes 0
Isolates 36.45

Biome Distribution

Category Percentage (%)
Aerial Root 1.2
Bulb 0
Endosphere 14.16
Nodule 22.29
Rhizoplane 2.11
Rhizosphere 31.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495638_0000169 3300046460 Bacteria 101640
2 JGI24740J21852_10014982 3300001979 Bacteria 2844
3 JGI25152J39213_1000401 3300002773 Bacteria 26413
4 JGI25150J39212_1000088 3300002774 Bacteria 53538
5 JGI25151J46595_10000280 3300003187 Bacteria 58125
6 JGI25151J46595_10001825 3300003187 Bacteria 13731
7 JGI25153J46596_10004388 3300003215 Bacteria 7609
8 rootH1_10072325 3300003316 Bacteria 6020
9 rootL2_10065419 3300003322 Bacteria 5470
10 JGI25160J50197_1001505 3300003354 Bacteria 11577
11 Ga0055526_1006157 3300003771 Bacteria 6606
12 Ga0055524_1001735 3300003775 Bacteria 12094
13 Ga0070670_100000133 3300005331 Bacteria 69691
14 Ga0068854_100088616 3300005578 Bacteria 2298
15 Ga0075364_10013496 3300006051 Bacteria 5024
16 Ga0075362_10108362 3300006177 Bacteria 1305
17 Ga0075367_10137457 3300006178 Bacteria 1512
18 Ga0075369_10044027 3300006186 Bacteria 1917
19 Ga0075369_10046413 3300006186 Bacteria 1870
20 Ga0079104_1000015 3300006946 Bacteria 321803
21 Ga0105240_10002575 3300009093 Bacteria 29071
22 Ga0105243_10024705 3300009148 Bacteria 4585
23 Ga0105243_10198526 3300009148 Bacteria 1758
24 Ga0105237_10002023 3300009545 Bacteria 25780
25 Ga0123342_1009171 3300009766 Bacteria 11998
26 Ga0105239_10004895 3300010375 Bacteria 15842
27 Ga0157373_10015867 3300013100 Bacteria 5499
28 Ga0157373_10142073 3300013100 Bacteria 1688
29 Ga0157371_10024423 3300013102 Bacteria 4413
30 Ga0157370_10000661 3300013104 Bacteria 42855
31 Ga0157370_10001604 3300013104 Bacteria 27946
32 Ga0182007_10006344 3300015262 Bacteria 5085
33 Ga0182005_1003932 3300015265 Bacteria 4906
34 Ga0228711_1004434 3300022739 Bacteria 21595
35 Ga0228710_1004658 3300022740 Bacteria 21595
36 Ga0207425_1000432 3300025245 Bacteria 27708
37 Ga0209677_100364 3300025253 Bacteria 27796
38 Ga0209129_1000029 3300025258 Bacteria 401149
39 Ga0209129_1004094 3300025258 Bacteria 5937
40 Ga0209233_1000250 3300025261 Bacteria 85129
41 Ga0209673_1003139 3300025273 Bacteria 10091
42 Ga0209673_1028170 3300025273 Bacteria 1814
43 Ga0209130_1022489 3300025284 Bacteria 1406
44 Ga0209676_1016263 3300025292 Bacteria 2696
45 Ga0209025_1000044 3300025294 Bacteria 349480
46 Ga0209025_1000070 3300025294 Bacteria 287776
47 Ga0209025_1000205 3300025294 Bacteria 141452
48 Ga0209564_1009163 3300025295 Bacteria 4758
49 Ga0209758_1000094 3300025297 Bacteria 241068
50 Ga0209758_1000567 3300025297 Bacteria 58201
51 Ga0209758_1013631 3300025297 Bacteria 4408
52 Ga0209758_1030575 3300025297 Bacteria 2228
53 Ga0209050_1002468 3300025298 Bacteria 15765
54 Ga0209256_1003442 3300025299 Bacteria 11105
55 Ga0207426_1000538 3300025302 Bacteria 54233
56 Ga0209051_1055182 3300025303 Bacteria 1291
57 Ga0207695_10002230 3300025913 Bacteria 29083
58 Ga0207671_10000448 3300025914 Bacteria 56985
59 Ga0207650_10000592 3300025925 Bacteria 29057
60 Ga0207667_10087023 3300025949 Bacteria 3232
61 Ga0207640_10072708 3300025981 Bacteria 2321
62 Ga0207698_10372135 3300026142 Bacteria 1357
63 Ga0209281_1000034 3300027111 Bacteria 382562
64 Ga0209371_1001172 3300027312 Bacteria 19161
65 Ga0268266_10060884 3300028379 Bacteria 3255
66 Ga0307406_10011665 3300031901 Bacteria 4988
67 Ga0307412_10002568 3300031911 Bacteria 10085
68 Ga0307414_10069373 3300032004 Bacteria 2534
69 Ga0439465_0029484 3300041413 Bacteria 1743
70 Ga0451797_0722621 3300041453 Bacteria 1750
71 Ga0451833_0156114 3300041491 Bacteria 2316
72 Ga0451835_0011824 3300041492 Bacteria 3600
73 Ga0451837_0305137 3300041494 Bacteria 1969
74 Ga0451841_0920080 3300041498 Bacteria 1576
75 Ga0451845_0219800 3300041501 Bacteria 1464
76 Ga0451847_0841732 3300041503 Bacteria 3328
77 Ga0451855_0255178 3300041511 Bacteria 3218
78 Ga0451853_0007728 3300041512 Bacteria 4723
79 Ga0466963_0005690 3300044694 Bacteria 7323
80 Ga0466964_0126968 3300044706 Bacteria 1156
81 Ga0466971_0033168 3300044719 Bacteria 2314
82 Ga0466970_0000872 3300044765 Bacteria 14575
83 Ga0466959_0179985 3300045049 Bacteria 1479
84 Ga0466967_0085193 3300045976 Bacteria 2861
85 Ga0466967_0134751 3300045976 Bacteria 2296
86 Ga0495650_0054763 3300046471 Bacteria 1626
87 Ga0495585_0084055 3300046492 Bacteria 1722
88 Ga0495596_0001391 3300046500 Bacteria 13896
89 Ga0495607_0019127 3300046501 Bacteria 4355
90 Ga0495583_0000992 3300046506 Bacteria 32503
91 Ga0495606_0049416 3300046507 Bacteria 2758
92 Ga0495610_0000361 3300046512 Bacteria 47455
93 Ga0495610_0000961 3300046512 Bacteria 26635
94 Ga0495610_0005218 3300046512 Bacteria 9300
95 Ga0495610_0032233 3300046512 Bacteria 2725
96 Ga0495610_0036214 3300046512 Bacteria 2524
97 Ga0495610_0064021 3300046512 Bacteria 1739
98 Ga0495610_0066925 3300046512 Bacteria 1690
99 Ga0495610_0068222 3300046512 Bacteria 1667
100 Ga0495616_0034960 3300046513 Bacteria 2604
101 Ga0495620_0058403 3300046515 Bacteria 1615
102 Ga0495632_0029572 3300046519 Bacteria 2851
103 Ga0495632_0078158 3300046519 Bacteria 1581
104 Ga0495632_0120428 3300046519 Bacteria 1227
105 Ga0495643_0000041 3300046522 Bacteria 231342
106 Ga0495648_0070491 3300046524 Bacteria 2031
107 Ga0495654_0000083 3300046530 Bacteria 107518
108 Ga0495654_0012778 3300046530 Bacteria 4507
109 Ga0495609_0011230 3300046538 Bacteria 4271
110 Ga0495633_0016108 3300046558 Bacteria 3865
111 Ga0495611_0047510 3300046648 Bacteria 1927
112 Ga0495625_0018865 3300046660 Bacteria 5370
113 Ga0495625_0025457 3300046660 Bacteria 4489
114 Ga0495625_0090561 3300046660 Bacteria 2115
115 Ga0495625_0096736 3300046660 Bacteria 2033
116 Ga0495625_0136432 3300046660 Bacteria 1658
117 Ga0495661_0033658 3300046665 Bacteria 3231
118 Ga0495661_0118193 3300046665 Bacteria 1468
119 Ga0495588_0014578 3300046674 Bacteria 3763
120 Ga0495588_0054183 3300046674 Bacteria 2069
121 Ga0495649_0011304 3300046694 Bacteria 5241
122 Ga0495649_0160914 3300046694 Bacteria 1177
123 Ga0495589_0075293 3300046794 Bacteria 1646
124 Ga0495672_0027771 3300047320 Bacteria 3591
125 Ga0495683_0039145 3300047323 Bacteria 2397
126 Ga0495687_019100 3300047443 Bacteria 3371
127 Ga0495673_0042682 3300047469 Bacteria 2034
128 Ga0495681_0085042 3300047470 Bacteria 1405
129 Ga0495686_0004330 3300047472 Bacteria 11732
130 Ga0495686_0062739 3300047472 Bacteria 2304
131 Ga0495615_0013861 3300048090 Bacteria 1692
132 Ga0495626_0001617 3300048091 Bacteria 17518
133 Ga0496100_0004012 3300048903 Bacteria 7746
134 Ga0496102_0107670 3300048905 Bacteria 2595
135 Ga0496103_0041537 3300048906 Bacteria 2827
136 Ga0496106_0221189 3300048909 Bacteria 1510
137 Ga0496116_0002660 3300048919 Bacteria 18500
138 Ga0496116_0003199 3300048919 Bacteria 16377
139 Ga0496116_0003539 3300048919 Bacteria 15371
140 Ga0496116_0004652 3300048919 Bacteria 12999
141 Ga0496116_0014992 3300048919 Bacteria 6148
142 Ga0496116_0026128 3300048919 Bacteria 4276
143 Ga0496116_0081495 3300048919 Bacteria 2006
144 Ga0496116_0177833 3300048919 Bacteria 1143
145 Ga0496117_0003151 3300048920 Bacteria 19665
146 Ga0496117_0004687 3300048920 Bacteria 14851
147 Ga0496117_0011927 3300048920 Bacteria 7724
148 Ga0496117_0061970 3300048920 Bacteria 2566
149 Ga0496118_0009400 3300048921 Bacteria 9877
150 Ga0496118_0019977 3300048921 Bacteria 5962
151 Ga0496118_0025572 3300048921 Bacteria 5056
152 Ga0496118_0068890 3300048921 Bacteria 2566
153 Ga0496119_0003127 3300048922 Bacteria 17432
154 Ga0496119_0004507 3300048922 Bacteria 13821
155 Ga0496119_0039788 3300048922 Bacteria 3018
156 Ga0496119_0173876 3300048922 Bacteria 1135
157 Ga0496120_0002550 3300048923 Bacteria 18169
158 Ga0496120_0003022 3300048923 Bacteria 15931
159 Ga0496121_0001058 3300048924 Bacteria 48765
160 Ga0496121_0003073 3300048924 Bacteria 24180
161 Ga0496121_0005364 3300048924 Bacteria 16480
162 Ga0496121_0024213 3300048924 Bacteria 5814
163 Ga0496121_0098385 3300048924 Bacteria 2264
164 Ga0496121_0277848 3300048924 Bacteria 1147
165 Ga0496122_0002345 3300048925 Bacteria 27302
166 Ga0496122_0003047 3300048925 Bacteria 22665
167 Ga0496122_0005368 3300048925 Bacteria 15305
168 Ga0496122_0016206 3300048925 Bacteria 7076
169 Ga0496122_0025600 3300048925 Bacteria 5118
170 Ga0496122_0031010 3300048925 Bacteria 4461
171 Ga0496122_0038126 3300048925 Bacteria 3856
172 Ga0496122_0041650 3300048925 Bacteria 3627
173 Ga0496123_0001894 3300048926 Bacteria 27302
174 Ga0496123_0002549 3300048926 Bacteria 22213
175 Ga0496123_0003801 3300048926 Bacteria 16515
176 Ga0496123_0005095 3300048926 Bacteria 13418
177 Ga0496123_0015650 3300048926 Bacteria 6207
178 Ga0496123_0016868 3300048926 Bacteria 5903
179 Ga0496123_0078491 3300048926 Bacteria 2022
180 Ga0496123_0179034 3300048926 Bacteria 1109
181 Ga0496124_0002281 3300048927 Bacteria 25370
182 Ga0496124_0002807 3300048927 Bacteria 22062
183 Ga0496124_0011943 3300048927 Bacteria 8642
184 Ga0496124_0035757 3300048927 Bacteria 4342
185 Ga0496124_0036011 3300048927 Bacteria 4323
186 Ga0496124_0053476 3300048927 Bacteria 3422
187 Ga0496124_0058643 3300048927 Bacteria 3237
188 Ga0496124_0348405 3300048927 Bacteria 1049
189 Ga0496125_0004877 3300048928 Bacteria 15223
190 Ga0496125_0005914 3300048928 Bacteria 13413
191 Ga0496125_0030401 3300048928 Bacteria 4833
192 Ga0496125_0150582 3300048928 Bacteria 1599
193 Ga0496126_0008699 3300048929 Bacteria 10901
194 Ga0496126_0014162 3300048929 Bacteria 8072
195 Ga0496126_0015813 3300048929 Bacteria 7579
196 Ga0496126_0100754 3300048929 Bacteria 2527
197 Ga0495678_027989 3300049459 Bacteria 2384
198 Ga0495682_0090456 3300049460 Bacteria 1099
199 nmdc:mga03n38_68402_c1 3300050490 Bacteria 1637
200 nmdc:mga00v17_109325_c1 3300050491 Bacteria 1752
201 nmdc:mga00v17_72922_c1 3300050491 Bacteria 2131
202 nmdc:mga0yw44_40726_c1 3300050492 Bacteria 2762
203 nmdc:mga06z11_181454_c1 3300050494 Bacteria 1214
204 Ga0500618_000056 3300053125 Bacteria 98509
205 Ga0500618_000348 3300053125 Bacteria 32595
206 Ga0500658_0145821 3300053134 Bacteria 1064
207 Ga0500568_0004470 3300053139 Bacteria 7467
208 Ga0500616_0004850 3300053153 Bacteria 9389
209 Ga0500627_0021312 3300053158 Bacteria 2614
210 Ga0500636_0007967 3300053177 Bacteria 6128
211 Ga0500645_018595 3300053730 Bacteria 2170
212 2503203608 2503198000 Bacteria 6884444
213 2509115805 2508501123 Bacteria 6283661
214 2509393308 2509276022 Bacteria 6200534
215 2510898230 2510461076 Bacteria 8618824
216 2513580596 2513237085 Bacteria 7695351
217 2513709582 2513237103 Bacteria 7647401
218 2514022980 2513237162 Bacteria 7468464
219 2515110877 2515075009 Bacteria 7288508
220 2515638600 2515154113 Bacteria 7807172
221 2515645730 2515154114 Bacteria 7848616
222 2515661080 2515154116 Bacteria 7552979
223 2515743181 2515154134 Bacteria 7220242
224 2517039565 2516653077 Bacteria 7555578
225 2517075070 2516653085 Bacteria 7346596
226 2517405487 2517287029 Bacteria 6905599
227 2559298584 2558860242 Bacteria 5568029
228 2585254666 2582581304 Bacteria 5831370
229 2585282333 2582581308 Bacteria 7413247
230 2585404254 2582581867 Bacteria 7184437
231 2585525232 2585427526 Bacteria 7258840
232 2585540030 2585427528 Bacteria 6842387
233 2585556483 2585427530 Bacteria 7383882
234 2585823186 2585427590 Bacteria 6824633
235 2585838011 2585427593 Bacteria 7141551
236 2585900103 2585427608 Bacteria 6544331
237 2599336342 2599185156 Bacteria 5403036
238 2599606291 2599185210 Bacteria 5624189
239 2616310085 2615840626 Bacteria 7921970
240 2616554527 2615840698 Bacteria 7319877
241 2644049050 2643221607 Bacteria 6314006
242 2644481800 2643221686 Bacteria 6310811
243 2644500978 2643221689 Bacteria 6042950
244 2738800294 2738541293 Bacteria 7065685
245 2738948555 2738541317 Bacteria 5340176
246 2739034897 2738541333 Bacteria 7106503
247 2739349477 2738543031 Bacteria 5769731
248 2766062624 2765235942 Bacteria 7445910
249 2806044184 2802429633 Bacteria 7341974
250 2806052004 2802429634 Bacteria 7083200
251 2806058306 2802429635 Bacteria 7650140
252 2806069210 2802429636 Bacteria 7597525
253 2806074537 2802429637 Bacteria 7067217
254 2808989961 2808606387 Bacteria 5697198
255 2819561653 2818991439 Bacteria 6907412
256 2819609415 2818991448 Bacteria 6772224
257 2819642494 2818991453 Bacteria 7181617
258 2819685222 2818991461 Bacteria 7026071
259 2821125747 2821123053 Bacteria 7836056
260 2838033322 2838029111 Bacteria 6603031
261 2838689015 2838686498 Bacteria 7807632
262 2838718528 2838714209 Bacteria 5525906
263 2838723527 2838719591 Bacteria 5523910
264 2838731310 2838729681 Bacteria 7400765
265 2838737802 2838736955 Bacteria 5760694
266 2838743796 2838742623 Bacteria 7396178
267 2841841829 2841840854 Bacteria 5761912
268 2841857144 2841851746 Bacteria 7532261
269 2842117158 2842110456 Bacteria 7656360
270 2842141608 2842140634 Bacteria 5759631
271 2842159649 2842156927 Bacteria 6894975
272 2842169480 2842163707 Bacteria 6916235
273 2842174875 2842170452 Bacteria 5525737
274 2842183735 2842180545 Bacteria 6888678
275 2842191356 2842187318 Bacteria 5524014
276 2842215570 2842211629 Bacteria 5523832
277 2842220952 2842217011 Bacteria 7497767
278 2842228291 2842224351 Bacteria 5524473
279 2842233785 2842229732 Bacteria 7475766
280 2842245260 2842243621 Bacteria 7421798
281 2842260090 2842257432 Bacteria 7401195
282 2842278567 2842271015 Bacteria 7807131
283 2842307171 2842304105 Bacteria 7023636
284 2842480013 2842475841 Bacteria 6603183
285 2842505202 2842502639 Bacteria 6604161
286 2842927906 2842922631 Bacteria 5824079
287 2844455540 2844454524 Bacteria 7952546
288 2857523291 2857516855 Bacteria 7787325
289 2857532308 2857531043 Bacteria 6754041
290 2876382535 2876377896 Bacteria 6565995
291 2899846862 2899845264 Bacteria 5672268
292 2904579841 2904578770 Bacteria 5302906
293 2909400819 2909399089 Bacteria 3922598
294 2913313515 2913308742 Bacteria 5350706
295 2917700625 2917699015 Bacteria 7043791
296 2919120489 2919119836 Bacteria 5208557
297 2919453486 2919450847 Bacteria 5631160
298 2922191214 2922185730 Bacteria 7113964
299 2926765336 2926760298 Bacteria 5505990
300 2933572715 2933570622 Bacteria 7023390
301 2933593323 2933586486 Bacteria 7667493
302 2935906707 2935901341 Bacteria 7341747
303 2936368529 2936367885 Bacteria 7324495
304 2938017944 2938014810 Bacteria 6700592
305 2958106507 2958100919 Bacteria 6800575
306 2958175362 2958172287 Bacteria 6716688
307 2977971534 2977971508 Bacteria 7472917
308 2979095423 2979089926 Bacteria 5670289
309 2979097675 2979095461 Bacteria 5669583
310 2979711528 2979710463 Bacteria 6785254
311 2984514255 2984509177 Bacteria 5274802
312 2984523286 2984518228 Bacteria 5277463
313 2984542692 2984537506 Bacteria 5277481
314 2984589030 2984587000 Bacteria 5263363
315 2995397071 2995392953 Bacteria 4539380
316 2995951815 2995948881 Bacteria 6358104
317 3005418901 3005416602 Bacteria 7064308
318 639647109 639633055 Bacteria 7751309
319 650741449 650716007 Bacteria 5573770
320 8005310927 8005307578 Bacteria 7395396
321 8005318207 8005314921 Bacteria 7072929
322 8005461516 8005460587 Bacteria 7157962
323 8005488916 8005484373 Bacteria 6297373
324 8005562764 8005556819 Bacteria 6908598
325 8005570037 8005563573 Bacteria 7153261
326 8005577282 8005570704 Bacteria 6957481
327 8005645998 8005645114 Bacteria 6950293
328 8005682608 8005682033 Bacteria 6726518
329 8018154316 8018150411 Bacteria 5549903
330 8018168554 8018163183 Bacteria 7277977
331 8023687386 8023680758 Bacteria 7729763
332 8057881612 8057874678 Bacteria 7494653
333 Ga0495638_0000169
334 JGI24740J21852_10014982
335 JGI25152J39213_1000401
336 JGI25150J39212_1000088
337 JGI25151J46595_10000280
338 JGI25151J46595_10001825
339 JGI25153J46596_10004388
340 rootH1_10072325
341 rootL2_10065419
342 JGI25160J50197_1001505
343 Ga0055526_1006157
344 Ga0055524_1001735
345 Ga0070670_100000133
346 Ga0068854_100088616
347 Ga0075364_10013496
348 Ga0075362_10108362
349 Ga0075367_10137457
350 Ga0075369_10044027
351 Ga0075369_10046413
352 Ga0079104_1000015
353 Ga0105240_10002575
354 Ga0105243_10024705
355 Ga0105243_10198526
356 Ga0105237_10002023
357 Ga0123342_1009171
358 Ga0105239_10004895
359 Ga0157373_10015867
360 Ga0157373_10142073
361 Ga0157371_10024423
362 Ga0157370_10000661
363 Ga0157370_10001604
364 Ga0182007_10006344
365 Ga0182005_1003932
366 Ga0228711_1004434
367 Ga0228710_1004658
368 Ga0207425_1000432
369 Ga0209677_100364
370 Ga0209129_1000029
371 Ga0209129_1004094
372 Ga0209233_1000250
373 Ga0209673_1003139
374 Ga0209673_1028170
375 Ga0209130_1022489
376 Ga0209676_1016263
377 Ga0209025_1000044
378 Ga0209025_1000070
379 Ga0209025_1000205
380 Ga0209564_1009163
381 Ga0209758_1000094
382 Ga0209758_1000567
383 Ga0209758_1013631
384 Ga0209758_1030575
385 Ga0209050_1002468
386 Ga0209256_1003442
387 Ga0207426_1000538
388 Ga0209051_1055182
389 Ga0207695_10002230
390 Ga0207671_10000448
391 Ga0207650_10000592
392 Ga0207667_10087023
393 Ga0207640_10072708
394 Ga0207698_10372135
395 Ga0209281_1000034
396 Ga0209371_1001172
397 Ga0268266_10060884
398 Ga0307406_10011665
399 Ga0307412_10002568
400 Ga0307414_10069373
401 Ga0439465_0029484
402 Ga0451797_0722621
403 Ga0451833_0156114
404 Ga0451835_0011824
405 Ga0451837_0305137
406 Ga0451841_0920080
407 Ga0451845_0219800
408 Ga0451847_0841732
409 Ga0451855_0255178
410 Ga0451853_0007728
411 Ga0466963_0005690
412 Ga0466964_0126968
413 Ga0466971_0033168
414 Ga0466970_0000872
415 Ga0466959_0179985
416 Ga0466967_0085193
417 Ga0466967_0134751
418 Ga0495650_0054763
419 Ga0495585_0084055
420 Ga0495596_0001391
421 Ga0495607_0019127
422 Ga0495583_0000992
423 Ga0495606_0049416
424 Ga0495610_0000361
425 Ga0495610_0000961
426 Ga0495610_0005218
427 Ga0495610_0032233
428 Ga0495610_0036214
429 Ga0495610_0064021
430 Ga0495610_0066925
431 Ga0495610_0068222
432 Ga0495616_0034960
433 Ga0495620_0058403
434 Ga0495632_0029572
435 Ga0495632_0078158
436 Ga0495632_0120428
437 Ga0495643_0000041
438 Ga0495648_0070491
439 Ga0495654_0000083
440 Ga0495654_0012778
441 Ga0495609_0011230
442 Ga0495633_0016108
443 Ga0495611_0047510
444 Ga0495625_0018865
445 Ga0495625_0025457
446 Ga0495625_0090561
447 Ga0495625_0096736
448 Ga0495625_0136432
449 Ga0495661_0033658
450 Ga0495661_0118193
451 Ga0495588_0014578
452 Ga0495588_0054183
453 Ga0495649_0011304
454 Ga0495649_0160914
455 Ga0495589_0075293
456 Ga0495672_0027771
457 Ga0495683_0039145
458 Ga0495687_019100
459 Ga0495673_0042682
460 Ga0495681_0085042
461 Ga0495686_0004330
462 Ga0495686_0062739
463 Ga0495615_0013861
464 Ga0495626_0001617
465 Ga0496100_0004012
466 Ga0496102_0107670
467 Ga0496103_0041537
468 Ga0496106_0221189
469 Ga0496116_0002660
470 Ga0496116_0003199
471 Ga0496116_0003539
472 Ga0496116_0004652
473 Ga0496116_0014992
474 Ga0496116_0026128
475 Ga0496116_0081495
476 Ga0496116_0177833
477 Ga0496117_0003151
478 Ga0496117_0004687
479 Ga0496117_0011927
480 Ga0496117_0061970
481 Ga0496118_0009400
482 Ga0496118_0019977
483 Ga0496118_0025572
484 Ga0496118_0068890
485 Ga0496119_0003127
486 Ga0496119_0004507
487 Ga0496119_0039788
488 Ga0496119_0173876
489 Ga0496120_0002550
490 Ga0496120_0003022
491 Ga0496121_0001058
492 Ga0496121_0003073
493 Ga0496121_0005364
494 Ga0496121_0024213
495 Ga0496121_0098385
496 Ga0496121_0277848
497 Ga0496122_0002345
498 Ga0496122_0003047
499 Ga0496122_0005368
500 Ga0496122_0016206
501 Ga0496122_0025600
502 Ga0496122_0031010
503 Ga0496122_0038126
504 Ga0496122_0041650
505 Ga0496123_0001894
506 Ga0496123_0002549
507 Ga0496123_0003801
508 Ga0496123_0005095
509 Ga0496123_0015650
510 Ga0496123_0016868
511 Ga0496123_0078491
512 Ga0496123_0179034
513 Ga0496124_0002281
514 Ga0496124_0002807
515 Ga0496124_0011943
516 Ga0496124_0035757
517 Ga0496124_0036011
518 Ga0496124_0053476
519 Ga0496124_0058643
520 Ga0496124_0348405
521 Ga0496125_0004877
522 Ga0496125_0005914
523 Ga0496125_0030401
524 Ga0496125_0150582
525 Ga0496126_0008699
526 Ga0496126_0014162
527 Ga0496126_0015813
528 Ga0496126_0100754
529 Ga0495678_027989
530 Ga0495682_0090456
531 nmdc:mga03n38_68402_c1
532 nmdc:mga00v17_109325_c1
533 nmdc:mga00v17_72922_c1
534 nmdc:mga0yw44_40726_c1
535 nmdc:mga06z11_181454_c1
536 Ga0500618_000056
537 Ga0500618_000348
538 Ga0500658_0145821
539 Ga0500568_0004470
540 Ga0500616_0004850
541 Ga0500627_0021312
542 Ga0500636_0007967
543 Ga0500645_018595
544 2503203608
545 2509115805
546 2509393308
547 2510898230
548 2513580596
549 2513709582
550 2514022980
551 2515110877
552 2515638600
553 2515645730
554 2515661080
555 2515743181
556 2517039565
557 2517075070
558 2517405487
559 2559298584
560 2585254666
561 2585282333
562 2585404254
563 2585525232
564 2585540030
565 2585556483
566 2585823186
567 2585838011
568 2585900103
569 2599336342
570 2599606291
571 2616310085
572 2616554527
573 2644049050
574 2644481800
575 2644500978
576 2738800294
577 2738948555
578 2739034897
579 2739349477
580 2766062624
581 2806044184
582 2806052004
583 2806058306
584 2806069210
585 2806074537
586 2808989961
587 2819561653
588 2819609415
589 2819642494
590 2819685222
591 2821125747
592 2838033322
593 2838689015
594 2838718528
595 2838723527
596 2838731310
597 2838737802
598 2838743796
599 2841841829
600 2841857144
601 2842117158
602 2842141608
603 2842159649
604 2842169480
605 2842174875
606 2842183735
607 2842191356
608 2842215570
609 2842220952
610 2842228291
611 2842233785
612 2842245260
613 2842260090
614 2842278567
615 2842307171
616 2842480013
617 2842505202
618 2842927906
619 2844455540
620 2857523291
621 2857532308
622 2876382535
623 2899846862
624 2904579841
625 2909400819
626 2913313515
627 2917700625
628 2919120489
629 2919453486
630 2922191214
631 2926765336
632 2933572715
633 2933593323
634 2935906707
635 2936368529
636 2938017944
637 2958106507
638 2958175362
639 2977971534
640 2979095423
641 2979097675
642 2979711528
643 2984514255
644 2984523286
645 2984542692
646 2984589030
647 2995397071
648 2995951815
649 3005418901
650 639647109
651 650741449
652 8005310927
653 8005318207
654 8005461516
655 8005488916
656 8005562764
657 8005570037
658 8005577282
659 8005645998
660 8005682608
661 8018154316
662 8018168554
663 8023687386
664 8057881612

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

255

333

0.97

PF06719

AraC_N

AraC-type transcriptional regulator N-terminus

70

221

0.95

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

294

333

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3oio-assembly1.cif.gz_A crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum 0.9206 202 305
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.9195 202 304
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9156 205 300
3lsg-assembly3.cif.gz_E the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9126 205 295
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.8986 197 302
ID Description Score Start End Superfamily
3lsgC02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9519 256 300 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9453 256 300 1.10.10.60
af_P09377_170_274_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9396 202 302 1.10.10.60
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9256 254 301 1.10.10.60
af_P31449_179_288_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9211 197 305 1.10.10.60
ID Description Score Start End GO Terms
AF-U2DEG8-F1-model_v4 deleted 0.966 202 301
AF-V6AIN8-F1-model_v4 deleted 0.9591 1 304
AF-A0A1V3IPU0-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9564 208 304 GO:0003700
GO:0043565
AF-A0A6D1W0T7-F1-model_v4 deleted 0.9556 202 302
AF-A0A7X8JQA0-F1-model_v4 deleted 0.9539 197 302

Map