F409877

General Info

Members Datasets Scaffolds Average Seq Length
329 201 658 201

Family's Representative Sequence

Representative Sequence 3300053087|Ga0500643_093978|Ga0500643_093978_95_778
Length 227
Sequence LKEASPAIRSFVSGYRLSRKERALVNTKIAIVDDQIEVRKALGELLDAYGYTSTLFESGDAFLEAAAKDEFACVISDVRMPGMDGVQLARELAGRQPAVPAILISGQADVPMAIAALKAGAEDFIEKPVDDIKLVAAINRGLSRVASLNASSRHAMENETRFDSLTAREKEVFDLVSEGQTSQVIAKKLGISSRTVESYRAQIMDKLQIDNIAALVRLAIRLGRITP

Samples

Sample ID Description Type Environment
1 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
54 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
55 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
56 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
57 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
58 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
59 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
60 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
61 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
62 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
63 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
64 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
65 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
66 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
117 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
118 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
119 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
120 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
121 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
122 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
123 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
124 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
125 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
126 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
130 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
133 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
140 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
166 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
167 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
168 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
169 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
170 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
171 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
172 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
173 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
174 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
177 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
178 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
181 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
182 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
183 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
184 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
187 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
188 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
189 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
190 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
191 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
192 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
193 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
194 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
195 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
196 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
197 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
198 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
199 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
200 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
201 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.38
Nodule 0
Rhizoplane 4.26
Rhizosphere 89.36
Stem 0
Stem Tuber 0
Unclassified 8.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500643_093978 3300053087 Bacteria 816
2 JGI25405J52794_10025978 3300003911 Unclassified 1202
3 Ga0068869_100260272 3300005334 Bacteria 1389
4 Ga0070680_100066389 3300005336 Bacteria 2958
5 Ga0070680_100113557 3300005336 Bacteria 2256
6 Ga0070682_100009633 3300005337 Bacteria 5469
7 Ga0070687_100044111 3300005343 Bacteria 2270
8 Ga0070692_10309127 3300005345 Bacteria 968
9 Ga0070668_100486859 3300005347 Bacteria 1066
10 Ga0070688_100142526 3300005365 Bacteria 1630
11 Ga0070659_100014261 3300005366 Bacteria 5933
12 Ga0070703_10094710 3300005406 Bacteria 1042
13 Ga0070714_100717790 3300005435 Bacteria 965
14 Ga0070714_101172495 3300005435 Bacteria 749
15 Ga0070713_100026468 3300005436 Bacteria 4555
16 Ga0070713_100410730 3300005436 Unclassified 1266
17 Ga0070710_10020276 3300005437 Bacteria 3447
18 Ga0070701_10003723 3300005438 Bacteria 6085
19 Ga0070711_100011281 3300005439 Bacteria 5543
20 Ga0070705_100000042 3300005440 Bacteria 64569
21 Ga0070700_100019250 3300005441 Bacteria 3937
22 Ga0070694_100016565 3300005444 Bacteria 4641
23 Ga0070694_100512213 3300005444 Bacteria 956
24 Ga0070708_100008469 3300005445 Bacteria 8259
25 Ga0070708_100029240 3300005445 Bacteria 4751
26 Ga0070663_100017381 3300005455 Bacteria 4693
27 Ga0070678_100308468 3300005456 Bacteria 1347
28 Ga0070662_100270751 3300005457 Bacteria 1371
29 Ga0070681_10005265 3300005458 Bacteria 12491
30 Ga0070681_10135632 3300005458 Bacteria 2392
31 Ga0070706_100087733 3300005467 Bacteria 2884
32 Ga0070707_100029860 3300005468 Bacteria 5188
33 Ga0070698_100029768 3300005471 Bacteria 5666
34 Ga0070698_100036645 3300005471 Bacteria 5064
35 Ga0070699_100001579 3300005518 Bacteria 20835
36 Ga0070699_100138392 3300005518 Unclassified 2148
37 Ga0070679_100045017 3300005530 Bacteria 4397
38 Ga0070697_100030350 3300005536 Bacteria 4342
39 Ga0070697_100032219 3300005536 Bacteria 4217
40 Ga0068853_100057104 3300005539 Bacteria 3367
41 Ga0070686_101089091 3300005544 Bacteria 659
42 Ga0070695_100008012 3300005545 Bacteria 6261
43 Ga0070696_100000734 3300005546 Bacteria 20936
44 Ga0070693_100008180 3300005547 Bacteria 5139
45 Ga0070693_100041926 3300005547 Bacteria 2577
46 Ga0070665_100408490 3300005548 Bacteria 1366
47 Ga0070704_100008644 3300005549 Bacteria 6120
48 Ga0070664_100567786 3300005564 Bacteria 1050
49 Ga0068857_100002345 3300005577 Bacteria 15413
50 Ga0068857_100606382 3300005577 Bacteria 1035
51 Ga0070702_100083996 3300005615 Bacteria 1914
52 Ga0070702_100662163 3300005615 Bacteria 791
53 Ga0068852_101235581 3300005616 Bacteria 768
54 Ga0068859_100002061 3300005617 Bacteria 20514
55 Ga0068866_10047223 3300005718 Bacteria 2170
56 Ga0068861_100009995 3300005719 Bacteria 6572
57 Ga0068870_10015853 3300005840 Bacteria 3586
58 Ga0068863_100500701 3300005841 Bacteria 1196
59 Ga0068858_100333903 3300005842 Bacteria 1450
60 Ga0068860_100206776 3300005843 Bacteria 1904
61 Ga0068860_100215288 3300005843 Bacteria 1864
62 Ga0068862_100122164 3300005844 Bacteria 2296
63 Ga0068862_100456132 3300005844 Bacteria 1206
64 Ga0068862_100899417 3300005844 Bacteria 870
65 Ga0081455_10000217 3300005937 Bacteria 73661
66 Ga0081455_10005582 3300005937 Bacteria 13760
67 Ga0081455_10007201 3300005937 Bacteria 11756
68 Ga0081455_10059622 3300005937 Unclassified 3221
69 Ga0081455_10316564 3300005937 Bacteria 1113
70 Ga0081540_1000099 3300005983 Bacteria 91686
71 Ga0081540_1083475 3300005983 Bacteria 1429
72 Ga0081540_1131615 3300005983 Bacteria 1020
73 Ga0081539_10085777 3300005985 Bacteria 1641
74 Ga0070717_10017096 3300006028 Bacteria 5635
75 Ga0070717_10033496 3300006028 Bacteria 4145
76 Ga0075365_10006502 3300006038 Bacteria 6433
77 Ga0075365_10029629 3300006038 Bacteria 3501
78 Ga0075365_10146697 3300006038 Bacteria 1640
79 Ga0075368_10016299 3300006042 Bacteria 2769
80 Ga0075368_10021178 3300006042 Bacteria 2468
81 Ga0075363_100024880 3300006048 Bacteria 3048
82 Ga0075364_10002100 3300006051 Bacteria 11118
83 Ga0075364_10128658 3300006051 Bacteria 1699
84 Ga0070715_10057634 3300006163 Bacteria 1693
85 Ga0070716_100306566 3300006173 Bacteria 1107
86 Ga0070712_100005794 3300006175 Bacteria 7636
87 Ga0075362_10022000 3300006177 Bacteria 2682
88 Ga0075428_100031567 3300006844 Bacteria 5853
89 Ga0075428_100098418 3300006844 Bacteria 3189
90 Ga0075428_100112557 3300006844 Bacteria 2965
91 Ga0075428_100295015 3300006844 Bacteria 1743
92 Ga0075428_100339151 3300006844 Bacteria 1614
93 Ga0075430_100000476 3300006846 Bacteria 30038
94 Ga0075430_100087029 3300006846 Bacteria 2615
95 Ga0075430_100119782 3300006846 Bacteria 2194
96 Ga0075431_100021647 3300006847 Bacteria 6575
97 Ga0075431_100202048 3300006847 Bacteria 2033
98 Ga0075431_100203540 3300006847 Bacteria 2025
99 Ga0075431_100454894 3300006847 Bacteria 1275
100 Ga0075433_10375224 3300006852 Bacteria 1256
101 Ga0075434_100012899 3300006871 Bacteria 7937
102 Ga0075434_100021689 3300006871 Bacteria 6246
103 Ga0075434_100048857 3300006871 Bacteria 4199
104 Ga0097620_100002061 3300006931 Bacteria 20514
105 Ga0075435_100023265 3300007076 Bacteria 4789
106 Ga0075435_100159301 3300007076 Unclassified 1900
107 Ga0075435_100271842 3300007076 Unclassified 1446
108 Ga0111539_10062720 3300009094 Bacteria 4399
109 Ga0111539_10318102 3300009094 Bacteria 1811
110 Ga0111539_10446394 3300009094 Bacteria 1506
111 Ga0114129_10009892 3300009147 Bacteria 13597
112 Ga0114129_10129694 3300009147 Bacteria 3465
113 Ga0114129_10132983 3300009147 Bacteria 3415
114 Ga0114129_10286440 3300009147 Unclassified 2200
115 Ga0114129_10477381 3300009147 Bacteria 1632
116 Ga0114129_11777005 3300009147 Bacteria 750
117 Ga0105241_10135605 3300009174 Bacteria 1998
118 Ga0105246_10116225 3300011119 Bacteria 1974
119 Ga0157373_10008181 3300013100 Bacteria 7779
120 Ga0157370_10006938 3300013104 Bacteria 12378
121 Ga0157372_10049712 3300013307 Bacteria 4664
122 Ga0157380_10126104 3300014326 Bacteria 2176
123 Ga0157380_11026871 3300014326 Bacteria 859
124 Ga0157379_10159990 3300014968 Bacteria 2033
125 Ga0163161_10685978 3300017792 Bacteria 852
126 Ga0207653_10097593 3300025885 Bacteria 1036
127 Ga0207692_10007444 3300025898 Bacteria 4487
128 Ga0207685_10023227 3300025905 Bacteria 2108
129 Ga0207699_10256815 3300025906 Bacteria 1206
130 Ga0207643_10013047 3300025908 Bacteria 4492
131 Ga0207684_10018561 3300025910 Bacteria 5955
132 Ga0207654_10254006 3300025911 Bacteria 1179
133 Ga0207707_10189542 3300025912 Bacteria 1794
134 Ga0207707_10323255 3300025912 Bacteria 1332
135 Ga0207693_10078750 3300025915 Bacteria 2579
136 Ga0207663_10014664 3300025916 Bacteria 4299
137 Ga0207660_10050336 3300025917 Bacteria 2957
138 Ga0207660_10105303 3300025917 Bacteria 2114
139 Ga0207662_10255369 3300025918 Bacteria 1152
140 Ga0207657_10307574 3300025919 Bacteria 1255
141 Ga0207652_10072447 3300025921 Bacteria 2996
142 Ga0207652_10213698 3300025921 Bacteria 1737
143 Ga0207646_10149318 3300025922 Bacteria 2107
144 Ga0207659_10499466 3300025926 Bacteria 1030
145 Ga0207700_10013400 3300025928 Bacteria 5333
146 Ga0207700_10027409 3300025928 Bacteria 3989
147 Ga0207664_10965590 3300025929 Bacteria 764
148 Ga0207704_10139992 3300025938 Bacteria 1691
149 Ga0207665_10095234 3300025939 Bacteria 2069
150 Ga0207689_10208317 3300025942 Bacteria 1615
151 Ga0207667_10304196 3300025949 Bacteria 1629
152 Ga0207712_10005228 3300025961 Bacteria 8207
153 Ga0207668_10480816 3300025972 Bacteria 1065
154 Ga0207668_10618453 3300025972 Bacteria 945
155 Ga0207703_10170130 3300026035 Bacteria 1916
156 Ga0207639_10222449 3300026041 Bacteria 1631
157 Ga0207678_10098102 3300026067 Bacteria 2504
158 Ga0207708_10029366 3300026075 Bacteria 4167
159 Ga0207708_10032893 3300026075 Bacteria 3937
160 Ga0207708_10310623 3300026075 Unclassified 1284
161 Ga0207674_10021161 3300026116 Bacteria 7011
162 Ga0207674_10338892 3300026116 Bacteria 1454
163 Ga0207675_100011941 3300026118 Bacteria 8115
164 Ga0207698_10541921 3300026142 Bacteria 1139
165 Ga0209813_10031690 3300027866 Bacteria 1562
166 Ga0207428_10062226 3300027907 Bacteria 2952
167 Ga0207428_10139211 3300027907 Bacteria 1854
168 Ga0268266_10424202 3300028379 Bacteria 1261
169 Ga0268266_10801269 3300028379 Unclassified 910
170 Ga0268265_10002472 3300028380 Bacteria 13896
171 Ga0268264_10005501 3300028381 Bacteria 10740
172 Ga0307410_11174770 3300031852 Bacteria 668
173 Ga0373958_0058838 3300034819 Bacteria 828
174 Ga0373938_0076564 3300034957 Bacteria 809
175 Ga0373940_0008381 3300035088 Bacteria 2369
176 Ga0373949_0043775 3300035090 Unclassified 1109
177 Ga0373952_0015664 3300035092 Unclassified 1533
178 Ga0373939_0002721 3300035114 Bacteria 4148
179 Ga0373956_0082217 3300035119 Bacteria 1479
180 Ga0373942_0045701 3300035207 Bacteria 1211
181 Ga0373962_0006918 3300035242 Bacteria 2762
182 Ga0373931_0000926 3300035691 Bacteria 12329
183 Ga0373931_0874566 3300035691 Bacteria 603
184 Ga0373933_0408991 3300035724 Bacteria 885
185 Ga0451577_0133781 3300042876 Bacteria 2226
186 Ga0495629_0021484 3300046459 Bacteria 4606
187 Ga0495582_0462851 3300046473 Bacteria 732
188 Ga0495618_0063924 3300046514 Bacteria 2338
189 Ga0495628_0151424 3300046516 Bacteria 1767
190 Ga0495643_0100721 3300046522 Bacteria 1481
191 Ga0495640_0131889 3300046533 Bacteria 1616
192 Ga0495635_0154289 3300046663 Bacteria 1563
193 Ga0495659_0034112 3300046664 Bacteria 1789
194 Ga0495659_0222261 3300046664 Bacteria 780
195 Ga0495581_0210470 3300047315 Bacteria 1137
196 Ga0495604_0096806 3300047317 Bacteria 2177
197 Ga0495674_0054445 3300047319 Bacteria 3514
198 Ga0495676_0140315 3300047321 Bacteria 1733
199 Ga0495680_0365823 3300047322 Bacteria 1002
200 Ga0496102_0006148 3300048905 Bacteria 10235
201 Ga0496104_0004921 3300048907 Bacteria 11653
202 Ga0496105_0046001 3300048908 Bacteria 3602
203 Ga0496106_0002756 3300048909 Bacteria 13015
204 Ga0496108_0060285 3300048911 Bacteria 3193
205 Ga0496109_0022227 3300048912 Bacteria 5616
206 Ga0496110_0008838 3300048913 Bacteria 8116
207 Ga0496110_0154141 3300048913 Bacteria 2081
208 Ga0496111_0276615 3300048914 Bacteria 1245
209 Ga0496112_0014286 3300048915 Bacteria 7357
210 Ga0496113_0053411 3300048916 Bacteria 3021
211 Ga0496114_0433098 3300048917 Bacteria 1165
212 Ga0496115_0824834 3300048918 Bacteria 720
213 Ga0496115_0981983 3300048918 Bacteria 646
214 Ga0501031_0342437 3300049568 Unclassified 968
215 Ga0501032_0185224 3300049569 Bacteria 1362
216 Ga0501033_0395114 3300049570 Bacteria 965
217 Ga0501034_0152225 3300049571 Bacteria 2289
218 Ga0501036_0418575 3300049572 Bacteria 1117
219 Ga0501036_0793868 3300049572 Unclassified 780
220 Ga0501036_0922245 3300049572 Bacteria 716
221 Ga0501038_0171863 3300049574 Bacteria 1754
222 Ga0501038_0320359 3300049574 Bacteria 1213
223 Ga0501039_0127351 3300049575 Bacteria 1998
224 Ga0501039_0325130 3300049575 Bacteria 1209
225 Ga0501040_0178698 3300049576 Bacteria 1504
226 Ga0501040_0305555 3300049576 Bacteria 1137
227 Ga0501041_0231435 3300049577 Unclassified 1161
228 Ga0501041_0375937 3300049577 Bacteria 899
229 Ga0501041_0527962 3300049577 Bacteria 752
230 Ga0501042_0044004 3300049578 Bacteria 3181
231 Ga0501042_0363148 3300049578 Bacteria 1048
232 Ga0501042_0505196 3300049578 Bacteria 878
233 Ga0501043_0575553 3300049579 Bacteria 834
234 Ga0501046_0049275 3300049580 Bacteria 3332
235 Ga0501046_0127347 3300049580 Bacteria 1933
236 Ga0501046_0452235 3300049580 Bacteria 923
237 Ga0501068_0501828 3300049584 Bacteria 787
238 Ga0501068_0582219 3300049584 Bacteria 729
239 Ga0501069_0214253 3300049585 Bacteria 1118
240 Ga0501070_0097878 3300049586 Bacteria 2427
241 Ga0501070_0196047 3300049586 Bacteria 1659
242 Ga0501070_0815564 3300049586 Bacteria 732
243 Ga0501071_0221712 3300049587 Bacteria 1423
244 Ga0501072_0091887 3300049588 Bacteria 2410
245 Ga0501072_0414920 3300049588 Unclassified 1067
246 Ga0501072_0568816 3300049588 Unclassified 895
247 Ga0501073_0323838 3300049589 Unclassified 1064
248 Ga0501075_0113327 3300049591 Bacteria 2062
249 Ga0501075_0121728 3300049591 Bacteria 1986
250 Ga0501075_0151290 3300049591 Bacteria 1769
251 Ga0501076_0049964 3300049592 Bacteria 3308
252 Ga0501076_0235482 3300049592 Bacteria 1497
253 Ga0501076_0419574 3300049592 Bacteria 1101
254 Ga0501076_0709883 3300049592 Unclassified 830
255 Ga0501076_1151205 3300049592 Unclassified 639
256 Ga0501077_0003581 3300049593 Bacteria 9334
257 Ga0501077_0070738 3300049593 Bacteria 2211
258 Ga0501077_0353848 3300049593 Bacteria 937
259 Ga0501077_0612619 3300049593 Bacteria 699
260 Ga0501079_0008804 3300049741 Bacteria 7648
261 Ga0501079_0088489 3300049741 Bacteria 2398
262 Ga0501079_0184737 3300049741 Bacteria 1627
263 Ga0501079_0327035 3300049741 Unclassified 1200
264 Ga0501080_0140750 3300049742 Bacteria 2231
265 Ga0501080_0710562 3300049742 Unclassified 886
266 Ga0501080_0865143 3300049742 Bacteria 790
267 Ga0501081_0016300 3300049743 Bacteria 4911
268 Ga0501081_0017455 3300049743 Bacteria 4751
269 Ga0501081_0074271 3300049743 Bacteria 2372
270 Ga0501081_0216386 3300049743 Bacteria 1392
271 Ga0501081_0646797 3300049743 Bacteria 792
272 Ga0501083_0248525 3300049744 Unclassified 1158
273 Ga0501035_0444012 3300049822 Bacteria 1074
274 Ga0501044_0201723 3300049823 Bacteria 1947
275 Ga0501045_0070686 3300049824 Bacteria 2568
276 Ga0501045_0089317 3300049824 Bacteria 2276
277 Ga0501045_0120437 3300049824 Bacteria 1949
278 Ga0501045_0207992 3300049824 Bacteria 1458
279 nmdc:mga03683_97062_c1 3300050489 Bacteria 1291
280 nmdc:mga03n38_31445_c1 3300050490 Bacteria 2240
281 nmdc:mga00v17_47587_c1 3300050491 Bacteria 2598
282 nmdc:mga00v17_63323_c1 3300050491 Bacteria 2277
283 nmdc:mga0yw44_141972_c1 3300050492 Bacteria 1561
284 nmdc:mga0yw44_3921_c1 3300050492 Bacteria 6711
285 nmdc:mga06z11_3986_c1 3300050494 Bacteria 5762
286 nmdc:mga04h51_13572_c1 3300050495 Bacteria 2309
287 nmdc:mga04h51_6720_c1 3300050495 Bacteria 2998
288 nmdc:mga05p37_135264_c1 3300050507 Bacteria 3023
289 nmdc:mga05p37_197145_c1 3300050507 Bacteria 1465
290 nmdc:mga05p37_224689_c1 3300050507 Bacteria 2264
291 nmdc:mga05p37_312974_c1 3300050507 Bacteria 1860
292 nmdc:mga05p37_55111_c1 3300050507 Bacteria 4891
293 nmdc:mga05p37_565326_c1 3300050507 Bacteria 1291
294 nmdc:mga05p37_85398_c1 3300050507 Bacteria 2818
295 nmdc:mga09592_699953_c1 3300050508 Bacteria 862
296 nmdc:mga0qj67_66825_c1 3300050509 Bacteria 2864
297 nmdc:mga0qj67_69183_c1 3300050509 Bacteria 2815
298 nmdc:mga0qj67_930_c1 3300050509 Bacteria 20158
299 nmdc:mga06r32_104294_c1 3300050510 Bacteria 2784
300 nmdc:mga06r32_15803_c1 3300050510 Bacteria 6863
301 nmdc:mga06r32_26826_c1 3300050510 Bacteria 4042
302 nmdc:mga06r32_30174_c1 3300050510 Bacteria 5087
303 nmdc:mga06r32_345675_c1 3300050510 Bacteria 1472
304 nmdc:mga06r32_413677_c1 3300050510 Unclassified 1330
305 nmdc:mga08y16_270125_c1 3300050511 Bacteria 1756
306 nmdc:mga08y16_48730_c1 3300050511 Bacteria 4433
307 nmdc:mga0n895_19686_c1 3300050512 Bacteria 6276
308 nmdc:mga0n895_41663_c1 3300050512 Unclassified 4465
309 nmdc:mga0n895_52160_c1 3300050512 Bacteria 4014
310 nmdc:mga0rr50_23887_c1 3300050513 Bacteria 4226
311 nmdc:mga0a205_27070_c1 3300050515 Bacteria 5474
312 Ga0495601_0003099 3300053077 Bacteria 9493
313 Ga0495595_0148083 3300053084 Bacteria 1154
314 Ga0495619_0009325 3300053085 Bacteria 6195
315 Ga0500616_0143693 3300053153 Bacteria 1112
316 Ga0501084_0009889 3300054114 Bacteria 7882
317 Ga0501084_0169859 3300054114 Bacteria 1841
318 Ga0501084_0295982 3300054114 Unclassified 1367
319 Ga0501084_1025470 3300054114 Unclassified 693
320 Ga0501082_0001730 3300060353 Bacteria 19268
321 Ga0501082_0066397 3300060353 Bacteria 3107
322 Ga0501082_0359649 3300060353 Unclassified 1270
323 Ga0501082_0489452 3300060353 Unclassified 1075
324 Ga0501082_0556689 3300060353 Bacteria 1003
325 Ga0501082_1374741 3300060353 Bacteria 617
326 Ga0530510_0039378 3300061734 Bacteria 3412
327 Ga0530510_0233204 3300061734 Bacteria 1369
328 Ga0530510_0383403 3300061734 Unclassified 1058
329 Ga0530510_0704485 3300061734 Bacteria 769
330 Ga0500643_093978
331 JGI25405J52794_10025978
332 Ga0068869_100260272
333 Ga0070680_100066389
334 Ga0070680_100113557
335 Ga0070682_100009633
336 Ga0070687_100044111
337 Ga0070692_10309127
338 Ga0070668_100486859
339 Ga0070688_100142526
340 Ga0070659_100014261
341 Ga0070703_10094710
342 Ga0070714_100717790
343 Ga0070714_101172495
344 Ga0070713_100026468
345 Ga0070713_100410730
346 Ga0070710_10020276
347 Ga0070701_10003723
348 Ga0070711_100011281
349 Ga0070705_100000042
350 Ga0070700_100019250
351 Ga0070694_100016565
352 Ga0070694_100512213
353 Ga0070708_100008469
354 Ga0070708_100029240
355 Ga0070663_100017381
356 Ga0070678_100308468
357 Ga0070662_100270751
358 Ga0070681_10005265
359 Ga0070681_10135632
360 Ga0070706_100087733
361 Ga0070707_100029860
362 Ga0070698_100029768
363 Ga0070698_100036645
364 Ga0070699_100001579
365 Ga0070699_100138392
366 Ga0070679_100045017
367 Ga0070697_100030350
368 Ga0070697_100032219
369 Ga0068853_100057104
370 Ga0070686_101089091
371 Ga0070695_100008012
372 Ga0070696_100000734
373 Ga0070693_100008180
374 Ga0070693_100041926
375 Ga0070665_100408490
376 Ga0070704_100008644
377 Ga0070664_100567786
378 Ga0068857_100002345
379 Ga0068857_100606382
380 Ga0070702_100083996
381 Ga0070702_100662163
382 Ga0068852_101235581
383 Ga0068859_100002061
384 Ga0068866_10047223
385 Ga0068861_100009995
386 Ga0068870_10015853
387 Ga0068863_100500701
388 Ga0068858_100333903
389 Ga0068860_100206776
390 Ga0068860_100215288
391 Ga0068862_100122164
392 Ga0068862_100456132
393 Ga0068862_100899417
394 Ga0081455_10000217
395 Ga0081455_10005582
396 Ga0081455_10007201
397 Ga0081455_10059622
398 Ga0081455_10316564
399 Ga0081540_1000099
400 Ga0081540_1083475
401 Ga0081540_1131615
402 Ga0081539_10085777
403 Ga0070717_10017096
404 Ga0070717_10033496
405 Ga0075365_10006502
406 Ga0075365_10029629
407 Ga0075365_10146697
408 Ga0075368_10016299
409 Ga0075368_10021178
410 Ga0075363_100024880
411 Ga0075364_10002100
412 Ga0075364_10128658
413 Ga0070715_10057634
414 Ga0070716_100306566
415 Ga0070712_100005794
416 Ga0075362_10022000
417 Ga0075428_100031567
418 Ga0075428_100098418
419 Ga0075428_100112557
420 Ga0075428_100295015
421 Ga0075428_100339151
422 Ga0075430_100000476
423 Ga0075430_100087029
424 Ga0075430_100119782
425 Ga0075431_100021647
426 Ga0075431_100202048
427 Ga0075431_100203540
428 Ga0075431_100454894
429 Ga0075433_10375224
430 Ga0075434_100012899
431 Ga0075434_100021689
432 Ga0075434_100048857
433 Ga0097620_100002061
434 Ga0075435_100023265
435 Ga0075435_100159301
436 Ga0075435_100271842
437 Ga0111539_10062720
438 Ga0111539_10318102
439 Ga0111539_10446394
440 Ga0114129_10009892
441 Ga0114129_10129694
442 Ga0114129_10132983
443 Ga0114129_10286440
444 Ga0114129_10477381
445 Ga0114129_11777005
446 Ga0105241_10135605
447 Ga0105246_10116225
448 Ga0157373_10008181
449 Ga0157370_10006938
450 Ga0157372_10049712
451 Ga0157380_10126104
452 Ga0157380_11026871
453 Ga0157379_10159990
454 Ga0163161_10685978
455 Ga0207653_10097593
456 Ga0207692_10007444
457 Ga0207685_10023227
458 Ga0207699_10256815
459 Ga0207643_10013047
460 Ga0207684_10018561
461 Ga0207654_10254006
462 Ga0207707_10189542
463 Ga0207707_10323255
464 Ga0207693_10078750
465 Ga0207663_10014664
466 Ga0207660_10050336
467 Ga0207660_10105303
468 Ga0207662_10255369
469 Ga0207657_10307574
470 Ga0207652_10072447
471 Ga0207652_10213698
472 Ga0207646_10149318
473 Ga0207659_10499466
474 Ga0207700_10013400
475 Ga0207700_10027409
476 Ga0207664_10965590
477 Ga0207704_10139992
478 Ga0207665_10095234
479 Ga0207689_10208317
480 Ga0207667_10304196
481 Ga0207712_10005228
482 Ga0207668_10480816
483 Ga0207668_10618453
484 Ga0207703_10170130
485 Ga0207639_10222449
486 Ga0207678_10098102
487 Ga0207708_10029366
488 Ga0207708_10032893
489 Ga0207708_10310623
490 Ga0207674_10021161
491 Ga0207674_10338892
492 Ga0207675_100011941
493 Ga0207698_10541921
494 Ga0209813_10031690
495 Ga0207428_10062226
496 Ga0207428_10139211
497 Ga0268266_10424202
498 Ga0268266_10801269
499 Ga0268265_10002472
500 Ga0268264_10005501
501 Ga0307410_11174770
502 Ga0373958_0058838
503 Ga0373938_0076564
504 Ga0373940_0008381
505 Ga0373949_0043775
506 Ga0373952_0015664
507 Ga0373939_0002721
508 Ga0373956_0082217
509 Ga0373942_0045701
510 Ga0373962_0006918
511 Ga0373931_0000926
512 Ga0373931_0874566
513 Ga0373933_0408991
514 Ga0451577_0133781
515 Ga0495629_0021484
516 Ga0495582_0462851
517 Ga0495618_0063924
518 Ga0495628_0151424
519 Ga0495643_0100721
520 Ga0495640_0131889
521 Ga0495635_0154289
522 Ga0495659_0034112
523 Ga0495659_0222261
524 Ga0495581_0210470
525 Ga0495604_0096806
526 Ga0495674_0054445
527 Ga0495676_0140315
528 Ga0495680_0365823
529 Ga0496102_0006148
530 Ga0496104_0004921
531 Ga0496105_0046001
532 Ga0496106_0002756
533 Ga0496108_0060285
534 Ga0496109_0022227
535 Ga0496110_0008838
536 Ga0496110_0154141
537 Ga0496111_0276615
538 Ga0496112_0014286
539 Ga0496113_0053411
540 Ga0496114_0433098
541 Ga0496115_0824834
542 Ga0496115_0981983
543 Ga0501031_0342437
544 Ga0501032_0185224
545 Ga0501033_0395114
546 Ga0501034_0152225
547 Ga0501036_0418575
548 Ga0501036_0793868
549 Ga0501036_0922245
550 Ga0501038_0171863
551 Ga0501038_0320359
552 Ga0501039_0127351
553 Ga0501039_0325130
554 Ga0501040_0178698
555 Ga0501040_0305555
556 Ga0501041_0231435
557 Ga0501041_0375937
558 Ga0501041_0527962
559 Ga0501042_0044004
560 Ga0501042_0363148
561 Ga0501042_0505196
562 Ga0501043_0575553
563 Ga0501046_0049275
564 Ga0501046_0127347
565 Ga0501046_0452235
566 Ga0501068_0501828
567 Ga0501068_0582219
568 Ga0501069_0214253
569 Ga0501070_0097878
570 Ga0501070_0196047
571 Ga0501070_0815564
572 Ga0501071_0221712
573 Ga0501072_0091887
574 Ga0501072_0414920
575 Ga0501072_0568816
576 Ga0501073_0323838
577 Ga0501075_0113327
578 Ga0501075_0121728
579 Ga0501075_0151290
580 Ga0501076_0049964
581 Ga0501076_0235482
582 Ga0501076_0419574
583 Ga0501076_0709883
584 Ga0501076_1151205
585 Ga0501077_0003581
586 Ga0501077_0070738
587 Ga0501077_0353848
588 Ga0501077_0612619
589 Ga0501079_0008804
590 Ga0501079_0088489
591 Ga0501079_0184737
592 Ga0501079_0327035
593 Ga0501080_0140750
594 Ga0501080_0710562
595 Ga0501080_0865143
596 Ga0501081_0016300
597 Ga0501081_0017455
598 Ga0501081_0074271
599 Ga0501081_0216386
600 Ga0501081_0646797
601 Ga0501083_0248525
602 Ga0501035_0444012
603 Ga0501044_0201723
604 Ga0501045_0070686
605 Ga0501045_0089317
606 Ga0501045_0120437
607 Ga0501045_0207992
608 nmdc:mga03683_97062_c1
609 nmdc:mga03n38_31445_c1
610 nmdc:mga00v17_47587_c1
611 nmdc:mga00v17_63323_c1
612 nmdc:mga0yw44_141972_c1
613 nmdc:mga0yw44_3921_c1
614 nmdc:mga06z11_3986_c1
615 nmdc:mga04h51_13572_c1
616 nmdc:mga04h51_6720_c1
617 nmdc:mga05p37_135264_c1
618 nmdc:mga05p37_197145_c1
619 nmdc:mga05p37_224689_c1
620 nmdc:mga05p37_312974_c1
621 nmdc:mga05p37_55111_c1
622 nmdc:mga05p37_565326_c1
623 nmdc:mga05p37_85398_c1
624 nmdc:mga09592_699953_c1
625 nmdc:mga0qj67_66825_c1
626 nmdc:mga0qj67_69183_c1
627 nmdc:mga0qj67_930_c1
628 nmdc:mga06r32_104294_c1
629 nmdc:mga06r32_15803_c1
630 nmdc:mga06r32_26826_c1
631 nmdc:mga06r32_30174_c1
632 nmdc:mga06r32_345675_c1
633 nmdc:mga06r32_413677_c1
634 nmdc:mga08y16_270125_c1
635 nmdc:mga08y16_48730_c1
636 nmdc:mga0n895_19686_c1
637 nmdc:mga0n895_41663_c1
638 nmdc:mga0n895_52160_c1
639 nmdc:mga0rr50_23887_c1
640 nmdc:mga0a205_27070_c1
641 Ga0495601_0003099
642 Ga0495595_0148083
643 Ga0495619_0009325
644 Ga0500616_0143693
645 Ga0501084_0009889
646 Ga0501084_0169859
647 Ga0501084_0295982
648 Ga0501084_1025470
649 Ga0501082_0001730
650 Ga0501082_0066397
651 Ga0501082_0359649
652 Ga0501082_0489452
653 Ga0501082_0556689
654 Ga0501082_1374741
655 Ga0530510_0039378
656 Ga0530510_0233204
657 Ga0530510_0383403
658 Ga0530510_0704485

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

29

139

0.99

PF00196

GerE

Bacterial regulatory proteins, luxR family

163

219

0.98

PF08281

Sigma70_r4_2

Sigma-70, region 4

159

207

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wu4-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 22bp dna 0.9551 138 201
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9544 140 202
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9543 138 202
4wsz-assembly1.cif.gz_A crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9533 138 202
7ve5-assembly1.cif.gz_B c-terminal domain of vrar 0.9512 138 202
ID Description Score Start End Superfamily
af_Q11028_1077_1158_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9606 140 199 1.10.10.10
4if4D02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9536 138 202 1.10.10.10
af_P52106_149_214_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9513 141 196 1.10.10.10
4if4B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9512 138 202 1.10.10.10
4if4C02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9492 138 202 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A363TK52-F1-model_v4 DNA-binding response regulator 0.9871 1 204 GO:0000160
GO:0003677
GO:0006355
AF-A0A363TK52-F1-model_v4 DNA-binding response regulator 0.9823 1 204 GO:0000160
GO:0003677
GO:0006355
AF-A0A7C4XRN7-F1-model_v4 Response regulator transcription factor 0.9666 1 204 GO:0000160
GO:0003677
GO:0006355
AF-A0A545U9Z4-F1-model_v4 Response regulator transcription factor 0.9628 3 200 GO:0000160
GO:0003677
GO:0006355
AF-A0A7C4XRN7-F1-model_v4 Response regulator transcription factor 0.962 1 204 GO:0000160
GO:0003677
GO:0006355

Map