F409330

General Info

Members Datasets Scaffolds Average Seq Length
328 194 656 417

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0010661|Ga0395900_0010661_7398_8732
Length 444
Sequence MRNTATSSPSTTWSHTWRSSLGHTLAEKILLAHCDADDFRPGEVITVRCDVVMANDVSGPIAFRAMEKMGAAKVFDPAKVVMVADHFAPAKDARTAELLKGMKEWADGQGVTFYDQGRGGIEHTLLCEEGWIVPGAVIAAGDSHTCTYGALGAFGTGLGSTDIAACLALGEFWQAVPGTIRVEFTGEKQEFVTGKDLILAVIGEIGVGGATNCALEFVGDGAAALSIDERLAVSNMAVEAGAETGFFPADEKTAEYLAGRTDQPWEPDESDPDAEFAQELTIDLSDLTPLVALPHLPGNVVPVDEAAGTRIDQVYIGNCSNGTMTDLRQTAQVLGGHRVHPDCRMIVVPATQSIYRQALAEGLLDVFVEAGAMVSTPTCGACFGGHMGLLAPGERAITTTNRNFRGRMGSTDAEVHLANAYVAAAAAVAGAIVHPAEVSSGVAT

Samples

Sample ID Description Type Environment
1 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
105 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
108 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
109 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
114 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
115 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
116 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
117 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
118 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
124 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
125 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
126 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
127 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
139 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
140 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
141 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
142 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
143 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
144 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
145 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
152 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
161 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
173 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
174 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
175 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
176 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
177 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
178 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
179 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
180 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
181 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
182 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
183 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
184 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
186 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
187 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
188 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
189 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
190 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
191 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
194 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.7
Metatranscriptomes 0.3
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.74
Nodule 0
Rhizoplane 15.85
Rhizosphere 80.79
Stem 0
Stem Tuber 0
Unclassified 4.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395900_0010661 3300037418 Bacteria 9399
2 JGI24743J22301_10001391 3300001991 Bacteria 3329
3 JGI24738J21930_10005004 3300002075 Bacteria 3206
4 JGI25151J46595_10001469 3300003187 Bacteria 15924
5 Ga0055540_1000335 3300003792 Bacteria 40623
6 Ga0070683_100075852 3300005329 Bacteria 3142
7 Ga0070683_100085403 3300005329 Bacteria 2958
8 Ga0070670_100178729 3300005331 Bacteria 1842
9 Ga0070680_100004240 3300005336 Bacteria 10759
10 Ga0070682_100015060 3300005337 Bacteria 4476
11 Ga0070682_100035977 3300005337 Bacteria 3025
12 Ga0068868_100028582 3300005338 Bacteria 4264
13 Ga0070660_100029046 3300005339 Bacteria 4141
14 Ga0070689_100135587 3300005340 Bacteria 1976
15 Ga0070691_10022246 3300005341 Bacteria 2940
16 Ga0070692_10001475 3300005345 Bacteria 8573
17 Ga0070692_10034994 3300005345 Bacteria 2540
18 Ga0070675_100032784 3300005354 Bacteria 4205
19 Ga0070674_100006039 3300005356 Bacteria 7041
20 Ga0070673_100029852 3300005364 Bacteria 4071
21 Ga0070673_100298040 3300005364 Bacteria 1419
22 Ga0070688_100045213 3300005365 Bacteria 2719
23 Ga0070659_100005610 3300005366 Bacteria 9022
24 Ga0070701_10003144 3300005438 Bacteria 6479
25 Ga0070705_100025155 3300005440 Unclassified 3224
26 Ga0070705_100140420 3300005440 Bacteria 1589
27 Ga0070678_100023645 3300005456 Bacteria 4099
28 Ga0070662_100002830 3300005457 Bacteria 10754
29 Ga0070681_10007229 3300005458 Bacteria 10833
30 Ga0070681_10014627 3300005458 Bacteria 7809
31 Ga0070681_10212195 3300005458 Bacteria 1852
32 Ga0070685_10012413 3300005466 Bacteria 4475
33 Ga0070707_100083928 3300005468 Bacteria 3078
34 Ga0070698_100068034 3300005471 Bacteria 3580
35 Ga0070679_100018340 3300005530 Bacteria 6789
36 Ga0070679_100113904 3300005530 Bacteria 2690
37 Ga0070684_100000869 3300005535 Bacteria 21325
38 Ga0070684_100004464 3300005535 Bacteria 10655
39 Ga0070684_100034111 3300005535 Bacteria 4349
40 Ga0068853_100012064 3300005539 Bacteria 7032
41 Ga0070672_100014217 3300005543 Bacteria 5634
42 Ga0070686_100011858 3300005544 Bacteria 4954
43 Ga0070686_100068571 3300005544 Bacteria 2314
44 Ga0070665_100001102 3300005548 Bacteria 33324
45 Ga0070665_100026962 3300005548 Bacteria 5785
46 Ga0070665_100336543 3300005548 Bacteria 1514
47 Ga0068855_100046644 3300005563 Bacteria 5121
48 Ga0070664_100027397 3300005564 Bacteria 4735
49 Ga0068857_100099426 3300005577 Bacteria 2610
50 Ga0068854_100065831 3300005578 Bacteria 2635
51 Ga0068854_100184406 3300005578 Bacteria 1632
52 Ga0068856_100021035 3300005614 Bacteria 6340
53 Ga0068856_100027355 3300005614 Bacteria 5564
54 Ga0068852_100003178 3300005616 Bacteria 11468
55 Ga0068852_100007390 3300005616 Bacteria 8017
56 Ga0068859_100167156 3300005617 Bacteria 2279
57 Ga0068864_100072012 3300005618 Bacteria 3011
58 Ga0068861_100041282 3300005719 Bacteria 3456
59 Ga0068858_100138853 3300005842 Bacteria 2281
60 Ga0068860_100028272 3300005843 Bacteria 5396
61 Ga0081455_10006412 3300005937 Bacteria 12616
62 Ga0081455_10007813 3300005937 Bacteria 11202
63 Ga0081538_10065580 3300005981 Bacteria 2043
64 Ga0070717_10028126 3300006028 Bacteria 4496
65 Ga0075365_10035786 3300006038 Bacteria 3214
66 Ga0075364_10006439 3300006051 Bacteria 6896
67 Ga0068871_100241053 3300006358 Bacteria 1572
68 Ga0097620_100167170 3300006931 Bacteria 2279
69 Ga0111539_10041629 3300009094 Bacteria 5521
70 Ga0111539_10219445 3300009094 Bacteria 2215
71 Ga0105245_10032271 3300009098 Bacteria 4637
72 Ga0105245_10058028 3300009098 Bacteria 3483
73 Ga0105245_10169347 3300009098 Bacteria 2079
74 Ga0105245_10350248 3300009098 Bacteria 1463
75 Ga0105243_10027681 3300009148 Bacteria 4346
76 Ga0105243_10050469 3300009148 Bacteria 3286
77 Ga0105243_10100942 3300009148 Bacteria 2395
78 Ga0105243_10101039 3300009148 Bacteria 2394
79 Ga0105243_10140002 3300009148 Bacteria 2063
80 Ga0105241_10058798 3300009174 Bacteria 2953
81 Ga0105242_10009376 3300009176 Bacteria 7511
82 Ga0105242_10112509 3300009176 Bacteria 2323
83 Ga0105242_10270854 3300009176 Bacteria 1538
84 Ga0105242_10277466 3300009176 Bacteria 1521
85 Ga0105248_10095539 3300009177 Bacteria 3346
86 Ga0105238_10015628 3300009551 Bacteria 7682
87 Ga0105239_10058537 3300010375 Bacteria 4228
88 Ga0105246_10140870 3300011119 Bacteria 1813
89 Ga0157371_10044308 3300013102 Bacteria 3168
90 Ga0157369_10016117 3300013105 Bacteria 8410
91 Ga0157369_10099335 3300013105 Bacteria 3103
92 Ga0157374_10095604 3300013296 Bacteria 2841
93 Ga0163162_10189948 3300013306 Bacteria 2181
94 Ga0157372_10099371 3300013307 Bacteria 3319
95 Ga0157375_10038938 3300013308 Bacteria 4570
96 Ga0157380_10010228 3300014326 Bacteria 6741
97 Ga0157376_10011206 3300014969 Bacteria 6598
98 Ga0206353_11623298 3300020082 Bacteria 3638
99 Ga0209129_1000016 3300025258 Bacteria 485491
100 Ga0209025_1000126 3300025294 Bacteria 200866
101 Ga0209758_1034910 3300025297 Bacteria 1991
102 Ga0209051_1000294 3300025303 Bacteria 79686
103 Ga0207642_10074039 3300025899 Bacteria 1631
104 Ga0207688_10000697 3300025901 Bacteria 16570
105 Ga0207707_10019771 3300025912 Bacteria 5879
106 Ga0207707_10048034 3300025912 Bacteria 3718
107 Ga0207707_10298278 3300025912 Bacteria 1394
108 Ga0207660_10024992 3300025917 Bacteria 4050
109 Ga0207660_10036421 3300025917 Bacteria 3421
110 Ga0207657_10042879 3300025919 Bacteria 3989
111 Ga0207657_10088151 3300025919 Bacteria 2594
112 Ga0207649_10028156 3300025920 Bacteria 3306
113 Ga0207652_10029414 3300025921 Bacteria 4593
114 Ga0207652_10056061 3300025921 Bacteria 3392
115 Ga0207646_10086447 3300025922 Bacteria 2805
116 Ga0207659_10105980 3300025926 Bacteria 2128
117 Ga0207687_10033207 3300025927 Bacteria 3499
118 Ga0207690_10020153 3300025932 Bacteria 4116
119 Ga0207706_10002450 3300025933 Bacteria 18110
120 Ga0207686_10048855 3300025934 Bacteria 2623
121 Ga0207669_10105144 3300025937 Bacteria 1877
122 Ga0207704_10054169 3300025938 Bacteria 2444
123 Ga0207691_10012079 3300025940 Bacteria 8282
124 Ga0207691_10019735 3300025940 Bacteria 6373
125 Ga0207691_10088434 3300025940 Bacteria 2778
126 Ga0207711_10065890 3300025941 Bacteria 3132
127 Ga0207661_10000304 3300025944 Bacteria 31236
128 Ga0207661_10004678 3300025944 Bacteria 9586
129 Ga0207661_10011919 3300025944 Bacteria 6313
130 Ga0207661_10067773 3300025944 Bacteria 2903
131 Ga0207667_10091186 3300025949 Bacteria 3148
132 Ga0207651_10267061 3300025960 Bacteria 1408
133 Ga0207712_10119996 3300025961 Bacteria 1988
134 Ga0207678_10006346 3300026067 Bacteria 10498
135 Ga0207708_10005715 3300026075 Bacteria 9195
136 Ga0207708_10015653 3300026075 Bacteria 5690
137 Ga0207702_10014500 3300026078 Bacteria 6544
138 Ga0207702_10014684 3300026078 Bacteria 6499
139 Ga0207702_10240470 3300026078 Unclassified 1696
140 Ga0207674_10112995 3300026116 Bacteria 2689
141 Ga0207674_10129533 3300026116 Bacteria 2487
142 Ga0207675_100067628 3300026118 Archaea 3339
143 Ga0207675_100184073 3300026118 Bacteria 2001
144 Ga0207683_10039507 3300026121 Bacteria 4117
145 Ga0207698_10065334 3300026142 Bacteria 2857
146 Ga0268266_10020570 3300028379 Bacteria 5623
147 Ga0268266_10137655 3300028379 Bacteria 2189
148 Ga0268264_10170414 3300028381 Bacteria 1968
149 Ga0265318_10007332 3300028577 Bacteria 4993
150 Ga0265325_10002364 3300031241 Bacteria 12759
151 Ga0307416_100173208 3300032002 Bacteria 2012
152 Ga0373960_0006236 3300035121 Bacteria 2791
153 Ga0373947_0023881 3300035725 Bacteria 3559
154 Ga0395900_0019689 3300037418 Bacteria 6879
155 Ga0395900_0139877 3300037418 Bacteria 2479
156 Ga0395900_0167893 3300037418 Bacteria 2235
157 Ga0395898_0010062 3300037466 Bacteria 9898
158 Ga0395898_0046694 3300037466 Bacteria 4253
159 Ga0395905_0009445 3300037471 Bacteria 9529
160 Ga0395905_0009631 3300037471 Bacteria 9429
161 Ga0395905_0010662 3300037471 Bacteria 8913
162 Ga0395905_0141187 3300037471 Bacteria 2265
163 Ga0395905_0201797 3300037471 Bacteria 1864
164 Ga0395905_0285657 3300037471 Bacteria 1537
165 Ga0395901_0049633 3300038443 Bacteria 4360
166 Ga0395901_0099659 3300038443 Bacteria 3047
167 Ga0395901_0124603 3300038443 Unclassified 2707
168 Ga0395901_0273468 3300038443 Bacteria 1756
169 Ga0436363_0334013 3300039450 Bacteria 2972
170 Ga0451853_2240055 3300041512 Bacteria 2972
171 Ga0439449_0005992 3300042007 Bacteria 4643
172 Ga0439446_0006133 3300042156 Bacteria 3122
173 Ga0439434_0009606 3300042435 Bacteria 2846
174 Ga0466963_0023724 3300044694 Bacteria 3899
175 Ga0466963_0054365 3300044694 Bacteria 2661
176 Ga0466963_0109490 3300044694 Bacteria 1895
177 Ga0466957_0056835 3300044842 Bacteria 2393
178 Ga0466958_0001939 3300045836 Bacteria 10139
179 Ga0466958_0058139 3300045836 Bacteria 2351
180 Ga0466958_0113230 3300045836 Bacteria 1695
181 Ga0466967_0013880 3300045976 Bacteria 6247
182 Ga0495603_0005148 3300046455 Bacteria 7809
183 Ga0495603_0030853 3300046455 Bacteria 3228
184 Ga0495603_0035733 3300046455 Bacteria 2984
185 Ga0495603_0126640 3300046455 Unclassified 1488
186 Ga0495629_0018250 3300046459 Bacteria 5024
187 Ga0495629_0086537 3300046459 Bacteria 2186
188 Ga0495641_0044844 3300046461 Bacteria 2038
189 Ga0495651_0139666 3300046462 Bacteria 1758
190 Ga0495662_0055107 3300046476 Bacteria 1921
191 Ga0495608_0060213 3300046511 Bacteria 2499
192 Ga0495618_0020118 3300046514 Bacteria 4109
193 Ga0495618_0021613 3300046514 Unclassified 3967
194 Ga0495628_0044393 3300046516 Bacteria 3537
195 Ga0495630_0090586 3300046517 Unclassified 2310
196 Ga0495652_0041249 3300046529 Bacteria 3985
197 Ga0495640_0016585 3300046533 Bacteria 5507
198 Ga0495640_0171880 3300046533 Bacteria 1384
199 Ga0495586_0067648 3300046535 Bacteria 1948
200 Ga0495587_0064625 3300046536 Unclassified 2138
201 Ga0495645_0049653 3300046543 Bacteria 3055
202 Ga0495667_0009991 3300046559 Bacteria 6426
203 Ga0495656_0012804 3300046615 Bacteria 3105
204 Ga0495634_0072971 3300046642 Bacteria 2257
205 Ga0495635_0052074 3300046663 Unclassified 2820
206 Ga0495635_0086362 3300046663 Bacteria 2147
207 Ga0495599_0064546 3300046678 Bacteria 2287
208 Ga0495613_0045595 3300046689 Bacteria 3242
209 Ga0495613_0049012 3300046689 Bacteria 3118
210 Ga0495624_0119144 3300046690 Bacteria 1622
211 Ga0495604_0074142 3300047317 Bacteria 2566
212 Ga0495674_0071584 3300047319 Bacteria 2992
213 Ga0495674_0082507 3300047319 Bacteria 2756
214 Ga0495676_0152611 3300047321 Bacteria 1642
215 Ga0495680_0000298 3300047322 Bacteria 55499
216 Ga0495680_0002884 3300047322 Bacteria 17280
217 Ga0495680_0040803 3300047322 Bacteria 3695
218 Ga0495680_0085027 3300047322 Bacteria 2383
219 Ga0495684_0018466 3300047471 Bacteria 5373
220 Ga0495684_0034270 3300047471 Unclassified 3896
221 Ga0496100_0002248 3300048903 Bacteria 9755
222 Ga0496100_0015252 3300048903 Bacteria 4484
223 Ga0496100_0276358 3300048903 Bacteria 1251
224 Ga0496102_0050842 3300048905 Bacteria 3775
225 Ga0496102_0101078 3300048905 Bacteria 2678
226 Ga0496102_0142664 3300048905 Bacteria 2247
227 Ga0496102_0288806 3300048905 Bacteria 1546
228 Ga0496104_0002290 3300048907 Bacteria 16514
229 Ga0496104_0003247 3300048907 Bacteria 14012
230 Ga0496104_0056581 3300048907 Bacteria 3709
231 Ga0496104_0106991 3300048907 Bacteria 2680
232 Ga0496104_0124874 3300048907 Bacteria 2471
233 Ga0496104_0368128 3300048907 Bacteria 1350
234 Ga0496104_0383652 3300048907 Bacteria 1318
235 Ga0496105_0000125 3300048908 Bacteria 51796
236 Ga0496105_0008919 3300048908 Bacteria 7819
237 Ga0496105_0017621 3300048908 Bacteria 5729
238 Ga0496105_0062471 3300048908 Bacteria 3074
239 Ga0496106_0042148 3300048909 Bacteria 3423
240 Ga0496106_0082182 3300048909 Bacteria 2476
241 Ga0496107_0103113 3300048910 Bacteria 2093
242 Ga0496107_0307897 3300048910 Bacteria 1179
243 Ga0496108_0009663 3300048911 Bacteria 7817
244 Ga0496108_0013452 3300048911 Bacteria 6676
245 Ga0496108_0039481 3300048911 Bacteria 3934
246 Ga0496108_0054169 3300048911 Bacteria 3366
247 Ga0496108_0071872 3300048911 Bacteria 2920
248 Ga0496109_0012462 3300048912 Bacteria 7340
249 Ga0496109_0029774 3300048912 Bacteria 4891
250 Ga0496109_0056122 3300048912 Unclassified 3594
251 Ga0496109_0091535 3300048912 Bacteria 2813
252 Ga0496109_0139601 3300048912 Bacteria 2266
253 Ga0496109_0280936 3300048912 Bacteria 1569
254 Ga0496110_0000867 3300048913 Bacteria 21349
255 Ga0496110_0028950 3300048913 Bacteria 4761
256 Ga0496110_0033697 3300048913 Bacteria 4432
257 Ga0496110_0256371 3300048913 Bacteria 1592
258 Ga0496111_0001941 3300048914 Bacteria 12248
259 Ga0496111_0006079 3300048914 Bacteria 7806
260 Ga0496111_0012039 3300048914 Bacteria 5847
261 Ga0496111_0057277 3300048914 Bacteria 2821
262 Ga0496112_0018255 3300048915 Bacteria 6604
263 Ga0496112_0079214 3300048915 Bacteria 3250
264 Ga0496112_0100190 3300048915 Bacteria 2867
265 Ga0496112_0242870 3300048915 Bacteria 1753
266 Ga0496113_0045139 3300048916 Bacteria 3267
267 Ga0496113_0134649 3300048916 Bacteria 1941
268 Ga0496114_0003381 3300048917 Bacteria 12250
269 Ga0496114_0010544 3300048917 Bacteria 7353
270 Ga0496114_0024597 3300048917 Bacteria 4917
271 Ga0496114_0086980 3300048917 Bacteria 2649
272 Ga0496115_0001172 3300048918 Bacteria 18793
273 Ga0501031_0012651 3300049568 Bacteria 5510
274 Ga0501033_0003078 3300049570 Bacteria 13860
275 Ga0501037_0042026 3300049573 Bacteria 3360
276 Ga0501038_0059488 3300049574 Bacteria 3273
277 Ga0501038_0094548 3300049574 Bacteria 2498
278 Ga0501039_0009910 3300049575 Bacteria 7265
279 Ga0501039_0233055 3300049575 Bacteria 1447
280 Ga0501040_0000521 3300049576 Bacteria 23078
281 Ga0501040_0042782 3300049576 Bacteria 3086
282 Ga0501041_0078226 3300049577 Unclassified 2035
283 Ga0501042_0003055 3300049578 Bacteria 10413
284 Ga0501043_0057886 3300049579 Unclassified 3043
285 Ga0501046_0062214 3300049580 Bacteria 2917
286 Ga0501046_0133462 3300049580 Bacteria 1882
287 Ga0501048_0006826 3300049582 Bacteria 8672
288 Ga0501048_0039568 3300049582 Bacteria 3382
289 Ga0501067_0075354 3300049583 Bacteria 1869
290 Ga0501067_0089155 3300049583 Bacteria 1712
291 Ga0501069_0042243 3300049585 Bacteria 2522
292 Ga0501069_0059190 3300049585 Bacteria 2138
293 Ga0501070_0269900 3300049586 Bacteria 1389
294 Ga0501072_0000339 3300049588 Bacteria 33380
295 Ga0501072_0013996 3300049588 Bacteria 6148
296 Ga0501072_0056332 3300049588 Bacteria 3098
297 Ga0501073_0002870 3300049589 Bacteria 12909
298 Ga0501074_0006684 3300049590 Bacteria 8326
299 Ga0501075_0048810 3300049591 Bacteria 3181
300 Ga0501076_0000339 3300049592 Bacteria 28861
301 Ga0501076_0028197 3300049592 Bacteria 4358
302 Ga0501077_0004905 3300049593 Bacteria 8121
303 Ga0501079_0011600 3300049741 Bacteria 6728
304 Ga0501079_0012802 3300049741 Bacteria 6405
305 Ga0501080_0340543 3300049742 Unclassified 1355
306 Ga0501081_0003777 3300049743 Bacteria 9697
307 Ga0501081_0082750 3300049743 Bacteria 2249
308 Ga0501081_0090758 3300049743 Bacteria 2148
309 Ga0501035_0083226 3300049822 Bacteria 2823
310 Ga0501035_0086505 3300049822 Unclassified 2762
311 Ga0501045_0000970 3300049824 Bacteria 18745
312 Ga0501045_0046348 3300049824 Bacteria 3166
313 nmdc:mga00v17_12976_c1 3300050491 Bacteria 4613
314 nmdc:mga0n895_205202_c1 3300050512 Bacteria 2001
315 nmdc:mga0rr50_19457_c1 3300050513 Bacteria 4583
316 Ga0495601_0007888 3300053077 Bacteria 6271
317 Ga0495601_0094832 3300053077 Bacteria 1924
318 Ga0495601_0163595 3300053077 Bacteria 1454
319 Ga0495612_0070944 3300053078 Bacteria 1453
320 Ga0495619_0010357 3300053085 Bacteria 5870
321 Ga0495619_0034599 3300053085 Bacteria 3285
322 Ga0495619_0114430 3300053085 Unclassified 1846
323 Ga0501084_0026120 3300054114 Bacteria 4872
324 Ga0501084_0043776 3300054114 Bacteria 3745
325 Ga0501084_0104408 3300054114 Bacteria 2380
326 Ga0501084_0306308 3300054114 Bacteria 1342
327 Ga0501082_0034754 3300060353 Bacteria 4345
328 Ga0530510_0004837 3300061734 Bacteria 9319
329 Ga0395900_0010661
330 JGI24743J22301_10001391
331 JGI24738J21930_10005004
332 JGI25151J46595_10001469
333 Ga0055540_1000335
334 Ga0070683_100075852
335 Ga0070683_100085403
336 Ga0070670_100178729
337 Ga0070680_100004240
338 Ga0070682_100015060
339 Ga0070682_100035977
340 Ga0068868_100028582
341 Ga0070660_100029046
342 Ga0070689_100135587
343 Ga0070691_10022246
344 Ga0070692_10001475
345 Ga0070692_10034994
346 Ga0070675_100032784
347 Ga0070674_100006039
348 Ga0070673_100029852
349 Ga0070673_100298040
350 Ga0070688_100045213
351 Ga0070659_100005610
352 Ga0070701_10003144
353 Ga0070705_100025155
354 Ga0070705_100140420
355 Ga0070678_100023645
356 Ga0070662_100002830
357 Ga0070681_10007229
358 Ga0070681_10014627
359 Ga0070681_10212195
360 Ga0070685_10012413
361 Ga0070707_100083928
362 Ga0070698_100068034
363 Ga0070679_100018340
364 Ga0070679_100113904
365 Ga0070684_100000869
366 Ga0070684_100004464
367 Ga0070684_100034111
368 Ga0068853_100012064
369 Ga0070672_100014217
370 Ga0070686_100011858
371 Ga0070686_100068571
372 Ga0070665_100001102
373 Ga0070665_100026962
374 Ga0070665_100336543
375 Ga0068855_100046644
376 Ga0070664_100027397
377 Ga0068857_100099426
378 Ga0068854_100065831
379 Ga0068854_100184406
380 Ga0068856_100021035
381 Ga0068856_100027355
382 Ga0068852_100003178
383 Ga0068852_100007390
384 Ga0068859_100167156
385 Ga0068864_100072012
386 Ga0068861_100041282
387 Ga0068858_100138853
388 Ga0068860_100028272
389 Ga0081455_10006412
390 Ga0081455_10007813
391 Ga0081538_10065580
392 Ga0070717_10028126
393 Ga0075365_10035786
394 Ga0075364_10006439
395 Ga0068871_100241053
396 Ga0097620_100167170
397 Ga0111539_10041629
398 Ga0111539_10219445
399 Ga0105245_10032271
400 Ga0105245_10058028
401 Ga0105245_10169347
402 Ga0105245_10350248
403 Ga0105243_10027681
404 Ga0105243_10050469
405 Ga0105243_10100942
406 Ga0105243_10101039
407 Ga0105243_10140002
408 Ga0105241_10058798
409 Ga0105242_10009376
410 Ga0105242_10112509
411 Ga0105242_10270854
412 Ga0105242_10277466
413 Ga0105248_10095539
414 Ga0105238_10015628
415 Ga0105239_10058537
416 Ga0105246_10140870
417 Ga0157371_10044308
418 Ga0157369_10016117
419 Ga0157369_10099335
420 Ga0157374_10095604
421 Ga0163162_10189948
422 Ga0157372_10099371
423 Ga0157375_10038938
424 Ga0157380_10010228
425 Ga0157376_10011206
426 Ga0206353_11623298
427 Ga0209129_1000016
428 Ga0209025_1000126
429 Ga0209758_1034910
430 Ga0209051_1000294
431 Ga0207642_10074039
432 Ga0207688_10000697
433 Ga0207707_10019771
434 Ga0207707_10048034
435 Ga0207707_10298278
436 Ga0207660_10024992
437 Ga0207660_10036421
438 Ga0207657_10042879
439 Ga0207657_10088151
440 Ga0207649_10028156
441 Ga0207652_10029414
442 Ga0207652_10056061
443 Ga0207646_10086447
444 Ga0207659_10105980
445 Ga0207687_10033207
446 Ga0207690_10020153
447 Ga0207706_10002450
448 Ga0207686_10048855
449 Ga0207669_10105144
450 Ga0207704_10054169
451 Ga0207691_10012079
452 Ga0207691_10019735
453 Ga0207691_10088434
454 Ga0207711_10065890
455 Ga0207661_10000304
456 Ga0207661_10004678
457 Ga0207661_10011919
458 Ga0207661_10067773
459 Ga0207667_10091186
460 Ga0207651_10267061
461 Ga0207712_10119996
462 Ga0207678_10006346
463 Ga0207708_10005715
464 Ga0207708_10015653
465 Ga0207702_10014500
466 Ga0207702_10014684
467 Ga0207702_10240470
468 Ga0207674_10112995
469 Ga0207674_10129533
470 Ga0207675_100067628
471 Ga0207675_100184073
472 Ga0207683_10039507
473 Ga0207698_10065334
474 Ga0268266_10020570
475 Ga0268266_10137655
476 Ga0268264_10170414
477 Ga0265318_10007332
478 Ga0265325_10002364
479 Ga0307416_100173208
480 Ga0373960_0006236
481 Ga0373947_0023881
482 Ga0395900_0019689
483 Ga0395900_0139877
484 Ga0395900_0167893
485 Ga0395898_0010062
486 Ga0395898_0046694
487 Ga0395905_0009445
488 Ga0395905_0009631
489 Ga0395905_0010662
490 Ga0395905_0141187
491 Ga0395905_0201797
492 Ga0395905_0285657
493 Ga0395901_0049633
494 Ga0395901_0099659
495 Ga0395901_0124603
496 Ga0395901_0273468
497 Ga0436363_0334013
498 Ga0451853_2240055
499 Ga0439449_0005992
500 Ga0439446_0006133
501 Ga0439434_0009606
502 Ga0466963_0023724
503 Ga0466963_0054365
504 Ga0466963_0109490
505 Ga0466957_0056835
506 Ga0466958_0001939
507 Ga0466958_0058139
508 Ga0466958_0113230
509 Ga0466967_0013880
510 Ga0495603_0005148
511 Ga0495603_0030853
512 Ga0495603_0035733
513 Ga0495603_0126640
514 Ga0495629_0018250
515 Ga0495629_0086537
516 Ga0495641_0044844
517 Ga0495651_0139666
518 Ga0495662_0055107
519 Ga0495608_0060213
520 Ga0495618_0020118
521 Ga0495618_0021613
522 Ga0495628_0044393
523 Ga0495630_0090586
524 Ga0495652_0041249
525 Ga0495640_0016585
526 Ga0495640_0171880
527 Ga0495586_0067648
528 Ga0495587_0064625
529 Ga0495645_0049653
530 Ga0495667_0009991
531 Ga0495656_0012804
532 Ga0495634_0072971
533 Ga0495635_0052074
534 Ga0495635_0086362
535 Ga0495599_0064546
536 Ga0495613_0045595
537 Ga0495613_0049012
538 Ga0495624_0119144
539 Ga0495604_0074142
540 Ga0495674_0071584
541 Ga0495674_0082507
542 Ga0495676_0152611
543 Ga0495680_0000298
544 Ga0495680_0002884
545 Ga0495680_0040803
546 Ga0495680_0085027
547 Ga0495684_0018466
548 Ga0495684_0034270
549 Ga0496100_0002248
550 Ga0496100_0015252
551 Ga0496100_0276358
552 Ga0496102_0050842
553 Ga0496102_0101078
554 Ga0496102_0142664
555 Ga0496102_0288806
556 Ga0496104_0002290
557 Ga0496104_0003247
558 Ga0496104_0056581
559 Ga0496104_0106991
560 Ga0496104_0124874
561 Ga0496104_0368128
562 Ga0496104_0383652
563 Ga0496105_0000125
564 Ga0496105_0008919
565 Ga0496105_0017621
566 Ga0496105_0062471
567 Ga0496106_0042148
568 Ga0496106_0082182
569 Ga0496107_0103113
570 Ga0496107_0307897
571 Ga0496108_0009663
572 Ga0496108_0013452
573 Ga0496108_0039481
574 Ga0496108_0054169
575 Ga0496108_0071872
576 Ga0496109_0012462
577 Ga0496109_0029774
578 Ga0496109_0056122
579 Ga0496109_0091535
580 Ga0496109_0139601
581 Ga0496109_0280936
582 Ga0496110_0000867
583 Ga0496110_0028950
584 Ga0496110_0033697
585 Ga0496110_0256371
586 Ga0496111_0001941
587 Ga0496111_0006079
588 Ga0496111_0012039
589 Ga0496111_0057277
590 Ga0496112_0018255
591 Ga0496112_0079214
592 Ga0496112_0100190
593 Ga0496112_0242870
594 Ga0496113_0045139
595 Ga0496113_0134649
596 Ga0496114_0003381
597 Ga0496114_0010544
598 Ga0496114_0024597
599 Ga0496114_0086980
600 Ga0496115_0001172
601 Ga0501031_0012651
602 Ga0501033_0003078
603 Ga0501037_0042026
604 Ga0501038_0059488
605 Ga0501038_0094548
606 Ga0501039_0009910
607 Ga0501039_0233055
608 Ga0501040_0000521
609 Ga0501040_0042782
610 Ga0501041_0078226
611 Ga0501042_0003055
612 Ga0501043_0057886
613 Ga0501046_0062214
614 Ga0501046_0133462
615 Ga0501048_0006826
616 Ga0501048_0039568
617 Ga0501067_0075354
618 Ga0501067_0089155
619 Ga0501069_0042243
620 Ga0501069_0059190
621 Ga0501070_0269900
622 Ga0501072_0000339
623 Ga0501072_0013996
624 Ga0501072_0056332
625 Ga0501073_0002870
626 Ga0501074_0006684
627 Ga0501075_0048810
628 Ga0501076_0000339
629 Ga0501076_0028197
630 Ga0501077_0004905
631 Ga0501079_0011600
632 Ga0501079_0012802
633 Ga0501080_0340543
634 Ga0501081_0003777
635 Ga0501081_0082750
636 Ga0501081_0090758
637 Ga0501035_0083226
638 Ga0501035_0086505
639 Ga0501045_0000970
640 Ga0501045_0046348
641 nmdc:mga00v17_12976_c1
642 nmdc:mga0n895_205202_c1
643 nmdc:mga0rr50_19457_c1
644 Ga0495601_0007888
645 Ga0495601_0094832
646 Ga0495601_0163595
647 Ga0495612_0070944
648 Ga0495619_0010357
649 Ga0495619_0034599
650 Ga0495619_0114430
651 Ga0501084_0026120
652 Ga0501084_0043776
653 Ga0501084_0104408
654 Ga0501084_0306308
655 Ga0501082_0034754
656 Ga0530510_0004837

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00330

Aconitase

Aconitase family (aconitate hydratase)

304

430

0.96

PF00330

Aconitase

Aconitase family (aconitate hydratase)

27

309

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kp2-assembly1.cif.gz_B-2 crystal structure of homoaconitase large subunit from methanococcus jannaschii (mj1003) 0.9443 3 414
4kp1-assembly1.cif.gz_A crystal structure of ipm isomerase large subunit from methanococcus jannaschii (mj0499) 0.9402 4 417
4kp2-assembly1.cif.gz_B-2 crystal structure of homoaconitase large subunit from methanococcus jannaschii (mj1003) 0.9289 3 414
4kp1-assembly1.cif.gz_A crystal structure of ipm isomerase large subunit from methanococcus jannaschii (mj0499) 0.9272 4 417
1c97-assembly1.cif.gz_A s642a:isocitrate complex of aconitase 0.9223 1 412
ID Description Score Start End Superfamily
4kp2B02 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9791 272 414 3.30.499.10
af_Q94AR8_68_346_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9727 4 269 3.30.499.10
af_P81291_4_274_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9727 4 269 3.30.499.10
af_Q9UT74_348_492_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9678 281 414 3.30.499.10
4kp2B02 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9658 272 414 3.30.499.10
ID Description Score Start End GO Terms
AF-A0A7C5WZ87-F1-model_v4 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.9916 315 417 GO:0003861
GO:0009098
GO:0046872
GO:0051536
AF-A0A1C5WZZ1-F1-model_v4 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) 0.9907 1 417 GO:0003861
GO:0009098
GO:0046872
GO:0051539
AF-A0A0F2Q5T4-F1-model_v4 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) 0.9903 1 419 GO:0003861
GO:0009098
GO:0046872
GO:0051539
AF-A0A373LMG2-F1-model_v4 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) 0.9903 1 417 GO:0003861
GO:0009098
GO:0046872
GO:0051539
AF-R5KPG7-F1-model_v4 deleted 0.9901 1 417

Map