F409201

General Info

Members Datasets Scaffolds Average Seq Length
328 153 656 506

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100062507|Ga0075434_1000625073
Length 585
Sequence MRNAIRFVIALLLAACALRTTAAQITTNPIPTPITKHGLAVEIKDVVRLPDTRGIRPADQDVTPAGWARIQFVRDLPDGRRFVNDSRGFLYLIDTSNQPRVYANLAEVFPLAVYNRLESGFIGFAFHPEFARNGLFYTVHGERGPGNPRTPDFIPPGFTAKDVTYHDIITEWHAANPAANTFAGTRRELLREVHVVANLGHPMGTAEFNPTAKPGDPDYGLLYTSGSDHGFSNGGGPNSNTASQTQRLDSVMTAILRFDPRSPKVTGGTKGLGDYTIPIANKFASDGDPNTLGEIYAYGFRNAHRISWDTDGTMFASDIGMNNIEEINIVRNGENYGWMKREGYWENGRWRGGQLNELFPLPQEVLDGRVKDGLTYPVAIYDHDEGHAVTDGFAYHGRIAALRGKFVFGDIQNGRLFASDLAELKKADDGIPQTVAPIEEVQLYIRGANGSRIDVSMRELVERTMGTSLPRVDLHISRTRDGELLLTSRQDGVIRMLVPDSTVTAAASPRRSPVTEAGSESYRNQRLDVAVRHAGSHPVRSPAASTVSATSPAVPSRSWRCRSSSSASSPRRHAWPHRHRRQAHR

Samples

Sample ID Description Type Environment
1 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
110 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
114 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
119 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
120 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
121 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
122 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
128 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
129 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
130 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
153 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.91
Nodule 0
Rhizoplane 3.35
Rhizosphere 95.73
Stem 0
Stem Tuber 0
Unclassified 14.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075434_100062507 3300006871 Bacteria 3706
2 JGI25406J46586_10023719 3300003203 Unclassified 2421
3 JGI25404J52841_10014446 3300003659 Unclassified 1713
4 Ga0065715_10095275 3300005293 Bacteria 4095
5 Ga0065715_10125299 3300005293 Bacteria 2134
6 Ga0065715_10148035 3300005293 Unclassified 1763
7 Ga0065707_10138913 3300005295 Bacteria 1800
8 Ga0070676_10054728 3300005328 Bacteria 2353
9 Ga0070683_100232938 3300005329 Bacteria 1751
10 Ga0070690_100031612 3300005330 Bacteria 3299
11 Ga0070690_100031655 3300005330 Bacteria 3297
12 Ga0070670_100003224 3300005331 Bacteria 13470
13 Ga0070670_100104176 3300005331 Bacteria 2444
14 Ga0070677_10011583 3300005333 Bacteria 3045
15 Ga0070666_10002313 3300005335 Bacteria 11524
16 Ga0070666_10003938 3300005335 Bacteria 9018
17 Ga0068868_100008833 3300005338 Bacteria 7218
18 Ga0068868_100038420 3300005338 Unclassified 3716
19 Ga0070689_100032072 3300005340 Bacteria 3995
20 Ga0070689_100033422 3300005340 Bacteria 3919
21 Ga0070669_100012133 3300005353 Bacteria 6116
22 Ga0070669_100127217 3300005353 Bacteria 1951
23 Ga0070675_100000113 3300005354 Bacteria 47301
24 Ga0070675_100000604 3300005354 Bacteria 24703
25 Ga0070675_100001738 3300005354 Bacteria 16089
26 Ga0070675_100003154 3300005354 Bacteria 12477
27 Ga0070675_100003299 3300005354 Bacteria 12239
28 Ga0070675_100096483 3300005354 Bacteria 2484
29 Ga0070671_100009762 3300005355 Bacteria 7708
30 Ga0070671_100009844 3300005355 Bacteria 7676
31 Ga0070671_100119677 3300005355 Bacteria 2216
32 Ga0070674_100011432 3300005356 Bacteria 5407
33 Ga0070674_100045212 3300005356 Bacteria 3008
34 Ga0070673_100063404 3300005364 Unclassified 2941
35 Ga0070673_100161283 3300005364 Bacteria 1907
36 Ga0070667_100003027 3300005367 Bacteria 14450
37 Ga0070667_100003251 3300005367 Bacteria 13889
38 Ga0070667_100047832 3300005367 Bacteria 3599
39 Ga0070714_100076518 3300005435 Unclassified 2905
40 Ga0070701_10027496 3300005438 Bacteria 2787
41 Ga0070705_100000627 3300005440 Bacteria 20377
42 Ga0070694_100003135 3300005444 Bacteria 9849
43 Ga0070694_100006378 3300005444 Bacteria 7156
44 Ga0070663_100059512 3300005455 Bacteria 2745
45 Ga0070681_10078705 3300005458 Bacteria 3253
46 Ga0070681_10085260 3300005458 Unclassified 3111
47 Ga0068867_100008173 3300005459 Bacteria 7391
48 Ga0068867_100145351 3300005459 Unclassified 1858
49 Ga0070685_10009958 3300005466 Bacteria 4931
50 Ga0070707_100002057 3300005468 Bacteria 19275
51 Ga0070707_100156132 3300005468 Unclassified 2223
52 Ga0070698_100002146 3300005471 Bacteria 21864
53 Ga0070699_100000371 3300005518 Bacteria 43874
54 Ga0070679_100014925 3300005530 Bacteria 7462
55 Ga0070679_100077773 3300005530 Bacteria 3307
56 Ga0068853_100168296 3300005539 Bacteria 1982
57 Ga0070686_100009094 3300005544 Bacteria 5573
58 Ga0070686_100034522 3300005544 Bacteria 3118
59 Ga0070695_100001243 3300005545 Bacteria 14004
60 Ga0070665_100003635 3300005548 Bacteria 16339
61 Ga0068855_100107513 3300005563 Bacteria 3205
62 Ga0068855_100141317 3300005563 Unclassified 2744
63 Ga0070664_100005312 3300005564 Bacteria 10332
64 Ga0070664_100021988 3300005564 Bacteria 5259
65 Ga0068857_100112775 3300005577 Bacteria 2444
66 Ga0070702_100003232 3300005615 Bacteria 7250
67 Ga0068859_100023248 3300005617 Bacteria 6219
68 Ga0068859_100129174 3300005617 Unclassified 2598
69 Ga0068859_100169436 3300005617 Bacteria 2264
70 Ga0068859_100230862 3300005617 Bacteria 1939
71 Ga0068859_100251068 3300005617 Unclassified 1859
72 Ga0068864_100011886 3300005618 Bacteria 7186
73 Ga0068864_100033950 3300005618 Unclassified 4338
74 Ga0068864_100035694 3300005618 Bacteria 4234
75 Ga0068863_100002937 3300005841 Bacteria 16851
76 Ga0068863_100003077 3300005841 Bacteria 16483
77 Ga0068863_100061630 3300005841 Bacteria 3547
78 Ga0068858_100001096 3300005842 Bacteria 28006
79 Ga0068858_100003155 3300005842 Bacteria 16506
80 Ga0068860_100002420 3300005843 Bacteria 19586
81 Ga0068860_100007689 3300005843 Bacteria 10774
82 Ga0068860_100026360 3300005843 Bacteria 5604
83 Ga0068860_100129054 3300005843 Unclassified 2424
84 Ga0068862_100004992 3300005844 Bacteria 11168
85 Ga0068862_100013418 3300005844 Bacteria 6779
86 Ga0081455_10026527 3300005937 Bacteria 5325
87 Ga0081455_10043252 3300005937 Bacteria 3943
88 Ga0081540_1000747 3300005983 Bacteria 29934
89 Ga0081539_10000222 3300005985 Bacteria 133128
90 Ga0081539_10002429 3300005985 Bacteria 26313
91 Ga0081539_10009614 3300005985 Bacteria 8031
92 Ga0075367_10022592 3300006178 Bacteria 3530
93 Ga0097621_100001360 3300006237 Bacteria 16810
94 Ga0097621_100012570 3300006237 Bacteria 6280
95 Ga0068871_100003480 3300006358 Bacteria 10818
96 Ga0068871_100013976 3300006358 Bacteria 5971
97 Ga0068871_100078690 3300006358 Bacteria 2726
98 Ga0075428_100001756 3300006844 Bacteria 23145
99 Ga0075428_100033655 3300006844 Bacteria 5657
100 Ga0075428_100110405 3300006844 Bacteria 2996
101 Ga0075428_100130187 3300006844 Bacteria 2737
102 Ga0075430_100000823 3300006846 Bacteria 24231
103 Ga0075431_100001997 3300006847 Bacteria 19449
104 Ga0075431_100094021 3300006847 Bacteria 3094
105 Ga0075431_100243275 3300006847 Bacteria 1830
106 Ga0075433_10007684 3300006852 Bacteria 8564
107 Ga0075433_10068124 3300006852 Bacteria 3124
108 Ga0075434_100014292 3300006871 Bacteria 7586
109 Ga0075434_100028393 3300006871 Bacteria 5497
110 Ga0075434_100075547 3300006871 Bacteria 3363
111 Ga0075434_100081636 3300006871 Bacteria 3230
112 Ga0075429_100020587 3300006880 Bacteria 5725
113 Ga0075429_100178780 3300006880 Bacteria 1859
114 Ga0068865_100005988 3300006881 Bacteria 7408
115 Ga0097620_100023248 3300006931 Bacteria 6219
116 Ga0097620_100129183 3300006931 Unclassified 2598
117 Ga0097620_100169433 3300006931 Bacteria 2264
118 Ga0097620_100230869 3300006931 Bacteria 1939
119 Ga0097620_100251066 3300006931 Unclassified 1859
120 Ga0075435_100001889 3300007076 Bacteria 13630
121 Ga0075435_100002560 3300007076 Bacteria 12120
122 Ga0075435_100024943 3300007076 Bacteria 4649
123 Ga0111539_10001660 3300009094 Bacteria 29729
124 Ga0111539_10016758 3300009094 Bacteria 9081
125 Ga0111539_10020010 3300009094 Bacteria 8244
126 Ga0111539_10021193 3300009094 Bacteria 8003
127 Ga0111539_10054195 3300009094 Bacteria 4772
128 Ga0111539_10249673 3300009094 Bacteria 2066
129 Ga0105245_10004462 3300009098 Bacteria 12374
130 Ga0105245_10006646 3300009098 Bacteria 10154
131 Ga0105245_10016839 3300009098 Bacteria 6382
132 Ga0105247_10003091 3300009101 Bacteria 11012
133 Ga0105247_10041757 3300009101 Bacteria 2807
134 Ga0105247_10060716 3300009101 Unclassified 2343
135 Ga0114129_10003673 3300009147 Bacteria 21588
136 Ga0114129_10005207 3300009147 Bacteria 18324
137 Ga0114129_10006469 3300009147 Bacteria 16615
138 Ga0114129_10022617 3300009147 Bacteria 8916
139 Ga0114129_10026437 3300009147 Bacteria 8217
140 Ga0114129_10043675 3300009147 Bacteria 6306
141 Ga0114129_10044929 3300009147 Bacteria 6212
142 Ga0114129_10111783 3300009147 Unclassified 3769
143 Ga0114129_10236330 3300009147 Bacteria 2458
144 Ga0114129_10356150 3300009147 Bacteria 1937
145 Ga0105243_10015829 3300009148 Bacteria 5705
146 Ga0105243_10074230 3300009148 Bacteria 2758
147 Ga0105241_10007514 3300009174 Bacteria 8018
148 Ga0105241_10030458 3300009174 Bacteria 4033
149 Ga0105242_10013322 3300009176 Bacteria 6352
150 Ga0105242_10033039 3300009176 Unclassified 4141
151 Ga0105242_10044675 3300009176 Bacteria 3589
152 Ga0105242_10118039 3300009176 Unclassified 2272
153 Ga0105248_10003727 3300009177 Bacteria 16900
154 Ga0105248_10006048 3300009177 Bacteria 13280
155 Ga0105248_10019040 3300009177 Bacteria 7591
156 Ga0105248_10092272 3300009177 Bacteria 3410
157 Ga0105248_10121230 3300009177 Bacteria 2950
158 Ga0105248_10131221 3300009177 Bacteria 2827
159 Ga0105237_10027896 3300009545 Bacteria 5754
160 Ga0105238_10031273 3300009551 Bacteria 5419
161 Ga0105238_10032334 3300009551 Bacteria 5323
162 Ga0105249_10007298 3300009553 Bacteria 9638
163 Ga0105249_10112213 3300009553 Bacteria 2578
164 Ga0105246_10004081 3300011119 Bacteria 8865
165 Ga0105246_10042895 3300011119 Unclassified 3065
166 Ga0157370_10189369 3300013104 Bacteria 1910
167 Ga0157374_10094267 3300013296 Unclassified 2860
168 Ga0157374_10200953 3300013296 Bacteria 1952
169 Ga0157378_10005799 3300013297 Bacteria 10823
170 Ga0157378_10009055 3300013297 Bacteria 8664
171 Ga0163162_10010427 3300013306 Bacteria 9034
172 Ga0163162_10018645 3300013306 Bacteria 6799
173 Ga0163162_10024759 3300013306 Bacteria 5928
174 Ga0163162_10095264 3300013306 Bacteria 3063
175 Ga0163162_10100012 3300013306 Bacteria 2991
176 Ga0163162_10111626 3300013306 Bacteria 2832
177 Ga0157375_10000563 3300013308 Bacteria 33386
178 Ga0157375_10002768 3300013308 Bacteria 15169
179 Ga0157375_10072438 3300013308 Unclassified 3462
180 Ga0157375_10121785 3300013308 Bacteria 2719
181 Ga0163163_10000643 3300014325 Bacteria 29951
182 Ga0163163_10017363 3300014325 Bacteria 6711
183 Ga0163163_10023413 3300014325 Bacteria 5862
184 Ga0163163_10045880 3300014325 Bacteria 4291
185 Ga0163163_10142685 3300014325 Unclassified 2438
186 Ga0163163_10145508 3300014325 Bacteria 2413
187 Ga0157380_10138561 3300014326 Bacteria 2087
188 Ga0157379_10000236 3300014968 Bacteria 43430
189 Ga0157379_10008954 3300014968 Bacteria 8726
190 Ga0157379_10095532 3300014968 Bacteria 2667
191 Ga0157379_10110497 3300014968 Bacteria 2468
192 Ga0157376_10001609 3300014969 Bacteria 14942
193 Ga0157376_10002550 3300014969 Bacteria 12359
194 Ga0207697_10011285 3300025315 Bacteria 3783
195 Ga0207682_10008149 3300025893 Bacteria 4155
196 Ga0207699_10050709 3300025906 Bacteria 2449
197 Ga0207654_10007147 3300025911 Bacteria 5621
198 Ga0207646_10003815 3300025922 Bacteria 16756
199 Ga0207681_10038190 3300025923 Bacteria 3179
200 Ga0207694_10002465 3300025924 Bacteria 15079
201 Ga0207694_10028323 3300025924 Bacteria 4270
202 Ga0207650_10024712 3300025925 Bacteria 4274
203 Ga0207659_10002152 3300025926 Bacteria 11704
204 Ga0207659_10002697 3300025926 Bacteria 10574
205 Ga0207659_10007235 3300025926 Bacteria 6819
206 Ga0207659_10011389 3300025926 Bacteria 5616
207 Ga0207687_10005333 3300025927 Bacteria 8514
208 Ga0207687_10026711 3300025927 Bacteria 3868
209 Ga0207687_10040230 3300025927 Bacteria 3204
210 Ga0207687_10041682 3300025927 Bacteria 3154
211 Ga0207644_10007839 3300025931 Bacteria 6976
212 Ga0207706_10028275 3300025933 Bacteria 5008
213 Ga0207709_10032418 3300025935 Bacteria 3059
214 Ga0207709_10035611 3300025935 Bacteria 2944
215 Ga0207670_10000975 3300025936 Bacteria 15096
216 Ga0207670_10008346 3300025936 Bacteria 5841
217 Ga0207670_10068576 3300025936 Bacteria 2444
218 Ga0207669_10040636 3300025937 Bacteria 2700
219 Ga0207669_10107364 3300025937 Unclassified 1862
220 Ga0207711_10025508 3300025941 Unclassified 4958
221 Ga0207711_10028661 3300025941 Bacteria 4688
222 Ga0207689_10002108 3300025942 Bacteria 18714
223 Ga0207679_10053479 3300025945 Bacteria 2968
224 Ga0207679_10079625 3300025945 Bacteria 2499
225 Ga0207679_10082571 3300025945 Bacteria 2461
226 Ga0207679_10153612 3300025945 Bacteria 1877
227 Ga0207658_10050101 3300025986 Bacteria 3071
228 Ga0207677_10037750 3300026023 Unclassified 3160
229 Ga0207677_10064942 3300026023 Bacteria 2544
230 Ga0207703_10015958 3300026035 Bacteria 5857
231 Ga0207703_10024045 3300026035 Bacteria 4794
232 Ga0207703_10050555 3300026035 Bacteria 3365
233 Ga0207703_10116763 3300026035 Bacteria 2285
234 Ga0207639_10055413 3300026041 Unclassified 3034
235 Ga0207678_10081019 3300026067 Bacteria 2779
236 Ga0207641_10001757 3300026088 Bacteria 20882
237 Ga0207641_10010236 3300026088 Bacteria 7712
238 Ga0207641_10065024 3300026088 Unclassified 3119
239 Ga0207676_10040138 3300026095 Bacteria 3585
240 Ga0207674_10008664 3300026116 Bacteria 11716
241 Ga0207674_10013186 3300026116 Bacteria 9193
242 Ga0207674_10090603 3300026116 Bacteria 3049
243 Ga0207675_100225631 3300026118 Bacteria 1806
244 Ga0207698_10096411 3300026142 Unclassified 2437
245 Ga0209813_10002191 3300027866 Bacteria 4458
246 Ga0207428_10004620 3300027907 Bacteria 13054
247 Ga0207428_10015034 3300027907 Bacteria 6705
248 Ga0207428_10018125 3300027907 Bacteria 6023
249 Ga0207428_10022233 3300027907 Bacteria 5355
250 Ga0207428_10036518 3300027907 Bacteria 4007
251 Ga0268265_10008997 3300028380 Bacteria 6755
252 Ga0268265_10012066 3300028380 Bacteria 5851
253 Ga0268264_10004754 3300028381 Bacteria 11527
254 Ga0268264_10018702 3300028381 Bacteria 5664
255 Ga0268264_10154235 3300028381 Unclassified 2062
256 Ga0373949_0017435 3300035090 Unclassified 1619
257 Ga0373952_0006930 3300035092 Unclassified 2110
258 Ga0373947_0016041 3300035725 Bacteria 4305
259 Ga0373947_0053304 3300035725 Bacteria 2439
260 Ga0373937_0071004 3300036401 Bacteria 3212
261 Ga0373925_0017124 3300037068 Bacteria 5247
262 Ga0373925_0128518 3300037068 Unclassified 1973
263 Ga0373925_0141071 3300037068 Bacteria 1886
264 Ga0439464_0003082 3300042439 Unclassified 4171
265 Ga0439460_0017067 3300042461 Bacteria 1941
266 Ga0495603_0044315 3300046455 Bacteria 2655
267 Ga0495580_0032014 3300046472 Unclassified 3797
268 Ga0495582_0001398 3300046473 Bacteria 13591
269 Ga0495594_0012793 3300046499 Bacteria 4376
270 Ga0495628_0061348 3300046516 Unclassified 2949
271 Ga0495630_0015552 3300046517 Bacteria 5558
272 Ga0495665_0017767 3300046531 Bacteria 3823
273 Ga0495586_0046736 3300046535 Bacteria 2334
274 Ga0495656_0037592 3300046615 Unclassified 2001
275 Ga0495634_0010611 3300046642 Bacteria 6746
276 Ga0495634_0046331 3300046642 Unclassified 2935
277 Ga0495647_0004565 3300046681 Bacteria 4509
278 Ga0495658_0009087 3300046683 Bacteria 4942
279 Ga0495669_0078793 3300046684 Bacteria 1510
280 Ga0495674_0104418 3300047319 Bacteria 2409
281 Ga0495602_0079790 3300048088 Bacteria 2759
282 Ga0496102_0092702 3300048905 Bacteria 2798
283 Ga0496104_0005798 3300048907 Bacteria 10815
284 Ga0496104_0058300 3300048907 Bacteria 3655
285 Ga0496104_0126363 3300048907 Unclassified 2455
286 Ga0496105_0115071 3300048908 Bacteria 2218
287 Ga0496108_0010069 3300048911 Bacteria 7671
288 Ga0496108_0088784 3300048911 Bacteria 2627
289 Ga0496109_0002969 3300048912 Bacteria 14185
290 Ga0496110_0021564 3300048913 Bacteria 5457
291 Ga0496111_0182507 3300048914 Unclassified 1560
292 Ga0496112_0120148 3300048915 Unclassified 2598
293 Ga0501071_0084805 3300049587 Bacteria 2323
294 nmdc:mga05p37_19848_c1 3300050507 Bacteria 8132
295 nmdc:mga05p37_29781_c1 3300050507 Bacteria 6661
296 nmdc:mga05p37_36244_c1 3300050507 Bacteria 6053
297 nmdc:mga05p37_4890_c1 3300050507 Bacteria 15684
298 nmdc:mga05p37_55214_c1 3300050507 Bacteria 4887
299 nmdc:mga05p37_77329_c1 3300050507 Bacteria 4097
300 nmdc:mga09592_13201_c1 3300050508 Bacteria 6744
301 nmdc:mga09592_172949_c1 3300050508 Bacteria 1868
302 nmdc:mga09592_211220_c1 3300050508 Unclassified 1681
303 nmdc:mga09592_228757_c1 3300050508 Bacteria 1611
304 nmdc:mga09592_9651_c1 3300050508 Bacteria 7842
305 nmdc:mga0qj67_35_c1 3300050509 Bacteria 93990
306 nmdc:mga06r32_4395_c1 3300050510 Bacteria 12607
307 nmdc:mga06r32_57066_c1 3300050510 Unclassified 3750
308 nmdc:mga06r32_772_c1 3300050510 Bacteria 28263
309 nmdc:mga08y16_127470_c1 3300050511 Bacteria 2647
310 nmdc:mga08y16_1769_c1 3300050511 Bacteria 21886
311 nmdc:mga08y16_18617_c1 3300050511 Bacteria 5499
312 nmdc:mga08y16_219803_c1 3300050511 Bacteria 1967
313 nmdc:mga08y16_5760_c1 3300050511 Bacteria 12969
314 nmdc:mga08y16_7497_c1 3300050511 Bacteria 11424
315 nmdc:mga08y16_9496_c1 3300050511 Bacteria 10211
316 nmdc:mga0n895_146803_c1 3300050512 Bacteria 2388
317 nmdc:mga0n895_228248_c1 3300050512 Unclassified 1890
318 nmdc:mga0n895_601_c1 3300050512 Bacteria 24893
319 nmdc:mga0n895_77527_c1 3300050512 Bacteria 3306
320 nmdc:mga0rr50_9398_c1 3300050513 Bacteria 6143
321 nmdc:mga0rr50_97499_c1 3300050513 Bacteria 2302
322 nmdc:mga0a205_123888_c1 3300050515 Unclassified 2484
323 nmdc:mga0a205_205910_c1 3300050515 Bacteria 1856
324 nmdc:mga0a205_30503_c1 3300050515 Bacteria 4378
325 nmdc:mga0a205_34675_c1 3300050515 Bacteria 4842
326 nmdc:mga0a205_73037_c1 3300050515 Bacteria 3315
327 Ga0495601_0047212 3300053077 Bacteria 2711
328 Ga0500641_0028601 3300053096 Bacteria 2178
329 Ga0075434_100062507
330 JGI25406J46586_10023719
331 JGI25404J52841_10014446
332 Ga0065715_10095275
333 Ga0065715_10125299
334 Ga0065715_10148035
335 Ga0065707_10138913
336 Ga0070676_10054728
337 Ga0070683_100232938
338 Ga0070690_100031612
339 Ga0070690_100031655
340 Ga0070670_100003224
341 Ga0070670_100104176
342 Ga0070677_10011583
343 Ga0070666_10002313
344 Ga0070666_10003938
345 Ga0068868_100008833
346 Ga0068868_100038420
347 Ga0070689_100032072
348 Ga0070689_100033422
349 Ga0070669_100012133
350 Ga0070669_100127217
351 Ga0070675_100000113
352 Ga0070675_100000604
353 Ga0070675_100001738
354 Ga0070675_100003154
355 Ga0070675_100003299
356 Ga0070675_100096483
357 Ga0070671_100009762
358 Ga0070671_100009844
359 Ga0070671_100119677
360 Ga0070674_100011432
361 Ga0070674_100045212
362 Ga0070673_100063404
363 Ga0070673_100161283
364 Ga0070667_100003027
365 Ga0070667_100003251
366 Ga0070667_100047832
367 Ga0070714_100076518
368 Ga0070701_10027496
369 Ga0070705_100000627
370 Ga0070694_100003135
371 Ga0070694_100006378
372 Ga0070663_100059512
373 Ga0070681_10078705
374 Ga0070681_10085260
375 Ga0068867_100008173
376 Ga0068867_100145351
377 Ga0070685_10009958
378 Ga0070707_100002057
379 Ga0070707_100156132
380 Ga0070698_100002146
381 Ga0070699_100000371
382 Ga0070679_100014925
383 Ga0070679_100077773
384 Ga0068853_100168296
385 Ga0070686_100009094
386 Ga0070686_100034522
387 Ga0070695_100001243
388 Ga0070665_100003635
389 Ga0068855_100107513
390 Ga0068855_100141317
391 Ga0070664_100005312
392 Ga0070664_100021988
393 Ga0068857_100112775
394 Ga0070702_100003232
395 Ga0068859_100023248
396 Ga0068859_100129174
397 Ga0068859_100169436
398 Ga0068859_100230862
399 Ga0068859_100251068
400 Ga0068864_100011886
401 Ga0068864_100033950
402 Ga0068864_100035694
403 Ga0068863_100002937
404 Ga0068863_100003077
405 Ga0068863_100061630
406 Ga0068858_100001096
407 Ga0068858_100003155
408 Ga0068860_100002420
409 Ga0068860_100007689
410 Ga0068860_100026360
411 Ga0068860_100129054
412 Ga0068862_100004992
413 Ga0068862_100013418
414 Ga0081455_10026527
415 Ga0081455_10043252
416 Ga0081540_1000747
417 Ga0081539_10000222
418 Ga0081539_10002429
419 Ga0081539_10009614
420 Ga0075367_10022592
421 Ga0097621_100001360
422 Ga0097621_100012570
423 Ga0068871_100003480
424 Ga0068871_100013976
425 Ga0068871_100078690
426 Ga0075428_100001756
427 Ga0075428_100033655
428 Ga0075428_100110405
429 Ga0075428_100130187
430 Ga0075430_100000823
431 Ga0075431_100001997
432 Ga0075431_100094021
433 Ga0075431_100243275
434 Ga0075433_10007684
435 Ga0075433_10068124
436 Ga0075434_100014292
437 Ga0075434_100028393
438 Ga0075434_100075547
439 Ga0075434_100081636
440 Ga0075429_100020587
441 Ga0075429_100178780
442 Ga0068865_100005988
443 Ga0097620_100023248
444 Ga0097620_100129183
445 Ga0097620_100169433
446 Ga0097620_100230869
447 Ga0097620_100251066
448 Ga0075435_100001889
449 Ga0075435_100002560
450 Ga0075435_100024943
451 Ga0111539_10001660
452 Ga0111539_10016758
453 Ga0111539_10020010
454 Ga0111539_10021193
455 Ga0111539_10054195
456 Ga0111539_10249673
457 Ga0105245_10004462
458 Ga0105245_10006646
459 Ga0105245_10016839
460 Ga0105247_10003091
461 Ga0105247_10041757
462 Ga0105247_10060716
463 Ga0114129_10003673
464 Ga0114129_10005207
465 Ga0114129_10006469
466 Ga0114129_10022617
467 Ga0114129_10026437
468 Ga0114129_10043675
469 Ga0114129_10044929
470 Ga0114129_10111783
471 Ga0114129_10236330
472 Ga0114129_10356150
473 Ga0105243_10015829
474 Ga0105243_10074230
475 Ga0105241_10007514
476 Ga0105241_10030458
477 Ga0105242_10013322
478 Ga0105242_10033039
479 Ga0105242_10044675
480 Ga0105242_10118039
481 Ga0105248_10003727
482 Ga0105248_10006048
483 Ga0105248_10019040
484 Ga0105248_10092272
485 Ga0105248_10121230
486 Ga0105248_10131221
487 Ga0105237_10027896
488 Ga0105238_10031273
489 Ga0105238_10032334
490 Ga0105249_10007298
491 Ga0105249_10112213
492 Ga0105246_10004081
493 Ga0105246_10042895
494 Ga0157370_10189369
495 Ga0157374_10094267
496 Ga0157374_10200953
497 Ga0157378_10005799
498 Ga0157378_10009055
499 Ga0163162_10010427
500 Ga0163162_10018645
501 Ga0163162_10024759
502 Ga0163162_10095264
503 Ga0163162_10100012
504 Ga0163162_10111626
505 Ga0157375_10000563
506 Ga0157375_10002768
507 Ga0157375_10072438
508 Ga0157375_10121785
509 Ga0163163_10000643
510 Ga0163163_10017363
511 Ga0163163_10023413
512 Ga0163163_10045880
513 Ga0163163_10142685
514 Ga0163163_10145508
515 Ga0157380_10138561
516 Ga0157379_10000236
517 Ga0157379_10008954
518 Ga0157379_10095532
519 Ga0157379_10110497
520 Ga0157376_10001609
521 Ga0157376_10002550
522 Ga0207697_10011285
523 Ga0207682_10008149
524 Ga0207699_10050709
525 Ga0207654_10007147
526 Ga0207646_10003815
527 Ga0207681_10038190
528 Ga0207694_10002465
529 Ga0207694_10028323
530 Ga0207650_10024712
531 Ga0207659_10002152
532 Ga0207659_10002697
533 Ga0207659_10007235
534 Ga0207659_10011389
535 Ga0207687_10005333
536 Ga0207687_10026711
537 Ga0207687_10040230
538 Ga0207687_10041682
539 Ga0207644_10007839
540 Ga0207706_10028275
541 Ga0207709_10032418
542 Ga0207709_10035611
543 Ga0207670_10000975
544 Ga0207670_10008346
545 Ga0207670_10068576
546 Ga0207669_10040636
547 Ga0207669_10107364
548 Ga0207711_10025508
549 Ga0207711_10028661
550 Ga0207689_10002108
551 Ga0207679_10053479
552 Ga0207679_10079625
553 Ga0207679_10082571
554 Ga0207679_10153612
555 Ga0207658_10050101
556 Ga0207677_10037750
557 Ga0207677_10064942
558 Ga0207703_10015958
559 Ga0207703_10024045
560 Ga0207703_10050555
561 Ga0207703_10116763
562 Ga0207639_10055413
563 Ga0207678_10081019
564 Ga0207641_10001757
565 Ga0207641_10010236
566 Ga0207641_10065024
567 Ga0207676_10040138
568 Ga0207674_10008664
569 Ga0207674_10013186
570 Ga0207674_10090603
571 Ga0207675_100225631
572 Ga0207698_10096411
573 Ga0209813_10002191
574 Ga0207428_10004620
575 Ga0207428_10015034
576 Ga0207428_10018125
577 Ga0207428_10022233
578 Ga0207428_10036518
579 Ga0268265_10008997
580 Ga0268265_10012066
581 Ga0268264_10004754
582 Ga0268264_10018702
583 Ga0268264_10154235
584 Ga0373949_0017435
585 Ga0373952_0006930
586 Ga0373947_0016041
587 Ga0373947_0053304
588 Ga0373937_0071004
589 Ga0373925_0017124
590 Ga0373925_0128518
591 Ga0373925_0141071
592 Ga0439464_0003082
593 Ga0439460_0017067
594 Ga0495603_0044315
595 Ga0495580_0032014
596 Ga0495582_0001398
597 Ga0495594_0012793
598 Ga0495628_0061348
599 Ga0495630_0015552
600 Ga0495665_0017767
601 Ga0495586_0046736
602 Ga0495656_0037592
603 Ga0495634_0010611
604 Ga0495634_0046331
605 Ga0495647_0004565
606 Ga0495658_0009087
607 Ga0495669_0078793
608 Ga0495674_0104418
609 Ga0495602_0079790
610 Ga0496102_0092702
611 Ga0496104_0005798
612 Ga0496104_0058300
613 Ga0496104_0126363
614 Ga0496105_0115071
615 Ga0496108_0010069
616 Ga0496108_0088784
617 Ga0496109_0002969
618 Ga0496110_0021564
619 Ga0496111_0182507
620 Ga0496112_0120148
621 Ga0501071_0084805
622 nmdc:mga05p37_19848_c1
623 nmdc:mga05p37_29781_c1
624 nmdc:mga05p37_36244_c1
625 nmdc:mga05p37_4890_c1
626 nmdc:mga05p37_55214_c1
627 nmdc:mga05p37_77329_c1
628 nmdc:mga09592_13201_c1
629 nmdc:mga09592_172949_c1
630 nmdc:mga09592_211220_c1
631 nmdc:mga09592_228757_c1
632 nmdc:mga09592_9651_c1
633 nmdc:mga0qj67_35_c1
634 nmdc:mga06r32_4395_c1
635 nmdc:mga06r32_57066_c1
636 nmdc:mga06r32_772_c1
637 nmdc:mga08y16_127470_c1
638 nmdc:mga08y16_1769_c1
639 nmdc:mga08y16_18617_c1
640 nmdc:mga08y16_219803_c1
641 nmdc:mga08y16_5760_c1
642 nmdc:mga08y16_7497_c1
643 nmdc:mga08y16_9496_c1
644 nmdc:mga0n895_146803_c1
645 nmdc:mga0n895_228248_c1
646 nmdc:mga0n895_601_c1
647 nmdc:mga0n895_77527_c1
648 nmdc:mga0rr50_9398_c1
649 nmdc:mga0rr50_97499_c1
650 nmdc:mga0a205_123888_c1
651 nmdc:mga0a205_205910_c1
652 nmdc:mga0a205_30503_c1
653 nmdc:mga0a205_34675_c1
654 nmdc:mga0a205_73037_c1
655 Ga0495601_0047212
656 Ga0500641_0028601

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07995

GSDH

Glucose / Sorbosone dehydrogenase

270

442

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yje-assembly1.cif.gz_C crystal structure of hira(644-1017) 0.8135 66 102
7cgz-assembly1.cif.gz_B glucose dehydrogenase 0.7997 40 499
3a9h-assembly1.cif.gz_A crystal structure of pqq-dependent sugar dehydrogenase holo-form 0.7994 37 498
7cdy-assembly1.cif.gz_A crystal structure of glucose dehydrogenase 0.7926 40 499
7cdy-assembly2.cif.gz_B crystal structure of glucose dehydrogenase 0.7897 40 499
ID Description Score Start End Superfamily
af_Q14DK5_187_578_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7715 37 498 2.120.10.30
af_Q14DK5_187_578_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7678 37 498 2.120.10.30
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7675 38 498 2.120.10.30
2ismB00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7675 39 498 2.120.10.30
2ismB00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7632 39 498 2.120.10.30
ID Description Score Start End GO Terms
AF-Q0GNJ0-F1-model_v4 Smu15B 0.9794 250 499
AF-A0A1F2S7B2-F1-model_v4 Glucose/Sorbosone dehydrogenase domain-containing protein 0.9773 23 499
AF-A0A3N5GD25-F1-model_v4 Glucose/Sorbosone dehydrogenase domain-containing protein 0.9724 106 499
AF-A0A1Q7HKG2-F1-model_v4 Glucose/Sorbosone dehydrogenase domain-containing protein 0.9695 23 499
AF-A0A351D1V1-F1-model_v4 Sugar dehydrogenase 0.9616 23 434

Map