F408608

General Info

Members Datasets Scaffolds Average Seq Length
327 186 319 200

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10000565|rootL2_100005655
Length 228
Sequence VIDERLYDGVNKKLRNVXXNEHSFIFVPFIMRTRDENKEQAIRRKAIEMIVEEGFDGLSMQKLAKAAGVSPATIYIYFKDRDDLIMQVWMGEMKKMVDAILKNFDPEASFEEGMRIQWMNRAKFLMENPMSMHFMEQVKYSPYHNVSLTKMDSNFQEVMGRFVHNAIKRKELVKLPFEVYWSVAFAPLYQLVKTHISGRGLRGNPEKFELDEKTMNMTLKLVIKALKP

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738541283 Pedobacter sp. OK701 Isolate Unclassified
3 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
4 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
5 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
6 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
7 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
8 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
9 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
10 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
11 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
12 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
13 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
14 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
19 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
20 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
21 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
24 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
25 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
26 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
61 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
62 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
63 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
89 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
102 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
103 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
104 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
105 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
106 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
107 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
108 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
109 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
110 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
111 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
112 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
113 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
114 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
115 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
116 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
117 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
121 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
122 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
123 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
124 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
125 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
126 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
127 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
128 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
129 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
130 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
134 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
135 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
136 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
139 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
146 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
147 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
148 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
149 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
150 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
151 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
152 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
153 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
154 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
157 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
161 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
162 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
163 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053097 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 endosphere Metagenome Endosphere
167 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
168 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
169 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
170 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
171 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
172 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
173 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
174 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
175 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
176 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
177 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
178 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
179 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
180 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
181 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
182 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
183 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
184 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
185 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
186 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.25
Metatranscriptomes 0
Isolates 2.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.88
Nodule 0
Rhizoplane 1.53
Rhizosphere 64.22
Stem 0
Stem Tuber 0
Unclassified 14.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10000991 3300001989 Bacteria 10567
2 JGI24739J22299_10003764 3300001989 Bacteria 5794
3 JGI24737J22298_10000568 3300001990 Bacteria 12974
4 JGI24735J21928_10000008 3300002067 Bacteria 319819
5 JGI25162J39368_1000046 3300002737 Bacteria 169695
6 JGI25157J39369_1015165 3300002741 Unclassified 950
7 rootH1_10008019 3300003316 Bacteria 5100
8 rootH1_10013502 3300003316 Bacteria 10913
9 rootH1_10047104 3300003316 Bacteria 9319
10 rootH2_10067950 3300003320 Bacteria 2146
11 rootH2_10151386 3300003320 Bacteria 1301
12 rootH2_10202314 3300003320 Bacteria 2998
13 rootH2_10209674 3300003320 Bacteria 1115
14 rootH2_10313174 3300003320 Bacteria 1533
15 rootL2_10000565 3300003322 Bacteria 5498
16 rootL2_10002427 3300003322 Bacteria 15148
17 rootL2_10030809 3300003322 Bacteria 4830
18 rootL2_10107076 3300003322 Bacteria 7603
19 rootL2_10160063 3300003322 Unclassified 4681
20 rootL2_10182105 3300003322 Bacteria 3998
21 rootL2_10187106 3300003322 Unclassified 2623
22 rootL2_10272950 3300003322 Bacteria 1583
23 rootL2_10287374 3300003322 Bacteria 2647
24 rootH1_10010281 3300003323 Bacteria 22319
25 rootH1_10011906 3300003323 Bacteria 17140
26 rootH1_10055582 3300003316 Bacteria 3056
27 rootH1_10055582 3300003323 Bacteria 3857
28 rootH1_10072350 3300003323 Unclassified 4518
29 rootH1_10120933 3300003323 Bacteria 8580
30 rootH1_10312626 3300003323 Bacteria 1611
31 rootH1_10333144 3300003323 Bacteria 1391
32 Ga0055526_1004781 3300003771 Bacteria 8020
33 Ga0055526_1020440 3300003771 Bacteria 2356
34 Ga0055528_1000180 3300003790 Bacteria 53597
35 Ga0055530_10008238 3300003791 Bacteria 4211
36 Ga0055543_1003696 3300004625 Bacteria 4395
37 Ga0065165_1000019 3300005262 Bacteria 271815
38 Ga0065165_1000724 3300005262 Bacteria 46099
39 Ga0065714_10094607 3300005288 Bacteria 1811
40 Ga0070666_10025366 3300005335 Unclassified 3864
41 Ga0068868_100073715 3300005338 Unclassified 2726
42 Ga0068868_101054065 3300005338 Bacteria 746
43 Ga0070671_100268200 3300005355 Bacteria 1451
44 Ga0070667_100432204 3300005367 Bacteria 1201
45 Ga0070684_100515741 3300005535 Bacteria 1108
46 Ga0068853_100048365 3300005539 Unclassified 3653
47 Ga0068853_100090240 3300005539 Bacteria 2693
48 Ga0068853_100134298 3300005539 Bacteria 2217
49 Ga0068853_100782227 3300005539 Bacteria 913
50 Ga0070665_100000008 3300005548 Bacteria 606341
51 Ga0068855_100008221 3300005563 Bacteria 12613
52 Ga0068857_100000507 3300005577 Bacteria 27953
53 Ga0068854_100006282 3300005578 Bacteria 7554
54 Ga0068854_100052564 3300005578 Bacteria 2922
55 Ga0068856_100020886 3300005614 Bacteria 6364
56 Ga0068856_100233360 3300005614 Bacteria 1855
57 Ga0068856_100689743 3300005614 Bacteria 1042
58 Ga0068852_100000123 3300005616 Bacteria 52266
59 Ga0068864_100689455 3300005618 Bacteria 997
60 Ga0068860_100000039 3300005843 Bacteria 232543
61 Ga0068860_100001055 3300005843 Bacteria 30405
62 Ga0075366_10033199 3300006195 Bacteria 3039
63 Ga0075366_10083526 3300006195 Bacteria 1909
64 Ga0075366_10329703 3300006195 Unclassified 935
65 Ga0075366_10341634 3300006195 Bacteria 918
66 Ga0075370_10195387 3300006353 Bacteria 1193
67 Ga0068871_100290987 3300006358 Bacteria 1431
68 Ga0105240_10000165 3300009093 Bacteria 134738
69 Ga0105240_10001248 3300009093 Bacteria 44154
70 Ga0105240_10006266 3300009093 Bacteria 17502
71 Ga0105240_10170146 3300009093 Bacteria 2581
72 Ga0105240_10173109 3300009093 Bacteria 2555
73 Ga0105240_10226349 3300009093 Unclassified 2176
74 Ga0105240_10769091 3300009093 Unclassified 1046
75 Ga0111539_10001121 3300009094 Bacteria 35428
76 Ga0114129_10006980 3300009147 Bacteria 16071
77 Ga0105241_10006481 3300009174 Bacteria 8629
78 Ga0105241_10056872 3300009174 Bacteria 3000
79 Ga0105241_10167962 3300009174 Bacteria 1809
80 Ga0105241_10308057 3300009174 Bacteria 1361
81 Ga0105241_10449474 3300009174 Unclassified 1140
82 Ga0105237_10000126 3300009545 Bacteria 107192
83 Ga0105237_10001477 3300009545 Bacteria 30982
84 Ga0105237_10001523 3300009545 Bacteria 30382
85 Ga0105237_10002812 3300009545 Bacteria 21141
86 Ga0105237_10005524 3300009545 Bacteria 14252
87 Ga0105237_10011842 3300009545 Bacteria 9226
88 Ga0105237_10189666 3300009545 Unclassified 2056
89 Ga0105237_10557661 3300009545 Bacteria 1152
90 Ga0105237_11326659 3300009545 Unclassified 726
91 Ga0105238_10001245 3300009551 Bacteria 25664
92 Ga0105238_10262476 3300009551 Unclassified 1707
93 Ga0105238_10475993 3300009551 Unclassified 1248
94 Ga0105238_10970315 3300009551 Bacteria 870
95 Ga0105249_10181651 3300009553 Unclassified 2047
96 Ga0105249_10278453 3300009553 Bacteria 1669
97 Ga0105249_11812037 3300009553 Unclassified 683
98 Ga0105239_10000332 3300010375 Bacteria 69065
99 Ga0105239_10001657 3300010375 Bacteria 29355
100 Ga0105239_10002251 3300010375 Bacteria 24667
101 Ga0105239_10003550 3300010375 Bacteria 19072
102 Ga0105239_10019076 3300010375 Bacteria 7580
103 Ga0105239_10488659 3300010375 Bacteria 1399
104 Ga0105246_10043637 3300011119 Bacteria 3043
105 Ga0157371_10015737 3300013102 Bacteria 5662
106 Ga0157371_10017987 3300013102 Bacteria 5236
107 Ga0157371_11005612 3300013102 Bacteria 636
108 Ga0157370_10013809 3300013104 Bacteria 8297
109 Ga0157370_10757141 3300013104 Bacteria 885
110 Ga0157369_10829605 3300013105 Bacteria 949
111 Ga0157369_11112873 3300013105 Unclassified 807
112 Ga0157369_11242117 3300013105 Bacteria 760
113 Ga0157374_10008418 3300013296 Bacteria 8813
114 Ga0157378_10351525 3300013297 Unclassified 1440
115 Ga0163162_10000203 3300013306 Bacteria 54901
116 Ga0163162_10002007 3300013306 Bacteria 19142
117 Ga0163162_10524415 3300013306 Bacteria 1314
118 Ga0163162_11344810 3300013306 Bacteria 812
119 Ga0157372_10000441 3300013307 Bacteria 45823
120 Ga0157372_10002053 3300013307 Bacteria 21900
121 Ga0157372_10701906 3300013307 Bacteria 1177
122 Ga0157372_10964473 3300013307 Bacteria 988
123 Ga0157375_10012207 3300013308 Bacteria 7615
124 Ga0157375_10198930 3300013308 Bacteria 2159
125 Ga0163163_10403946 3300014325 Unclassified 1424
126 Ga0163161_10022557 3300017792 Bacteria 4434
127 Ga0163161_10167396 3300017792 Unclassified 1679
128 Ga0209437_100070 3300025233 Bacteria 306718
129 Ga0209646_1000004 3300025246 Bacteria 786587
130 Ga0209646_1002262 3300025246 Bacteria 4412
131 Ga0209026_1000132 3300025250 Bacteria 119048
132 Ga0209673_1000042 3300025273 Bacteria 300704
133 Ga0209564_1001966 3300025295 Bacteria 18095
134 Ga0209758_1003644 3300025297 Bacteria 13740
135 Ga0209758_1004920 3300025297 Bacteria 10738
136 Ga0209050_1000308 3300025298 Bacteria 99516
137 Ga0207426_1002967 3300025302 Bacteria 9931
138 Ga0209051_1041380 3300025303 Bacteria 1640
139 Ga0209257_1001059 3300025304 Bacteria 36382
140 Ga0207680_10010408 3300025903 Unclassified 4650
141 Ga0207647_10010723 3300025904 Bacteria 6455
142 Ga0207647_10021385 3300025904 Bacteria 4319
143 Ga0207654_10001652 3300025911 Bacteria 11658
144 Ga0207654_10236695 3300025911 Bacteria 1218
145 Ga0207695_10000027 3300025913 Bacteria 612456
146 Ga0207695_10000247 3300025913 Bacteria 140966
147 Ga0207695_10003194 3300025913 Bacteria 23345
148 Ga0207695_10018360 3300025913 Bacteria 8091
149 Ga0207695_10096908 3300025913 Unclassified 2951
150 Ga0207695_10173548 3300025913 Bacteria 2080
151 Ga0207695_10191338 3300025913 Unclassified 1963
152 Ga0207671_10000560 3300025914 Bacteria 49995
153 Ga0207671_10000646 3300025914 Bacteria 45529
154 Ga0207671_10000960 3300025914 Bacteria 35779
155 Ga0207671_10002165 3300025914 Bacteria 21344
156 Ga0207671_10007859 3300025914 Bacteria 9157
157 Ga0207671_10009126 3300025914 Bacteria 8327
158 Ga0207671_10017456 3300025914 Bacteria 5531
159 Ga0207671_10100309 3300025914 Bacteria 2192
160 Ga0207694_10024653 3300025924 Unclassified 4569
161 Ga0207694_10082603 3300025924 Unclassified 2525
162 Ga0207694_10332775 3300025924 Bacteria 1255
163 Ga0207694_10506689 3300025924 Bacteria 1011
164 Ga0207644_10008662 3300025931 Bacteria 6655
165 Ga0207667_10000337 3300025949 Bacteria 64244
166 Ga0207667_10062699 3300025949 Unclassified 3886
167 Ga0207712_10300338 3300025961 Unclassified 1317
168 Ga0207640_10080852 3300025981 Bacteria 2220
169 Ga0207640_10243439 3300025981 Bacteria 1391
170 Ga0207677_10184382 3300026023 Bacteria 1644
171 Ga0207677_11145717 3300026023 Bacteria 710
172 Ga0207639_10046496 3300026041 Bacteria 3275
173 Ga0207639_10138797 3300026041 Unclassified 2023
174 Ga0207639_10870650 3300026041 Bacteria 841
175 Ga0207639_11031566 3300026041 Bacteria 771
176 Ga0207702_10254168 3300026078 Bacteria 1651
177 Ga0207702_10808898 3300026078 Bacteria 926
178 Ga0207676_10460116 3300026095 Bacteria 1201
179 Ga0207674_10002587 3300026116 Bacteria 22784
180 Ga0207674_10582752 3300026116 Bacteria 1081
181 Ga0207698_10000290 3300026142 Bacteria 30465
182 Ga0207698_11073751 3300026142 Bacteria 817
183 Ga0268266_10000016 3300028379 Bacteria 629101
184 Ga0268264_10000080 3300028381 Bacteria 249126
185 Ga0268264_10000532 3300028381 Bacteria 48255
186 Ga0307517_10003919 3300028786 Bacteria 23073
187 Ga0307517_10193647 3300028786 Bacteria 1285
188 Ga0307511_10000917 3300030521 Bacteria 31125
189 Ga0265327_10006758 3300031251 Bacteria 9063
190 Ga0307513_10058329 3300031456 Bacteria 4105
191 Ga0307513_10337076 3300031456 Bacteria 1260
192 Ga0307513_10418913 3300031456 Bacteria 1070
193 Ga0307509_10433223 3300031507 Bacteria 1013
194 Ga0307408_100168079 3300031548 Bacteria 1749
195 Ga0307405_10882652 3300031731 Unclassified 755
196 Ga0307510_10006258 3300033180 Bacteria 14207
197 Ga0373945_0056402 3300035116 Bacteria 1457
198 Ga0373935_0125054 3300035692 Bacteria 1722
199 Ga0373927_0082990 3300035695 Bacteria 2078
200 Ga0373925_0222246 3300037068 Bacteria 1508
201 Ga0395901_0338415 3300038443 Bacteria 1555
202 Ga0439436_0003908 3300041404 Bacteria 4570
203 Ga0439439_0002058 3300041406 Bacteria 4196
204 Ga0451793_1825578 3300041452 Bacteria 1486
205 Ga0451800_0075835 3300041459 Unclassified 680
206 Ga0451804_0943664 3300041463 Bacteria 1039
207 Ga0451807_0517279 3300041486 Bacteria 1236
208 Ga0451835_0398742 3300041492 Bacteria 1248
209 Ga0451837_1852020 3300041494 Bacteria 1085
210 Ga0451841_0010911 3300041498 Bacteria 920
211 Ga0451855_1129279 3300041511 Unclassified 688
212 Ga0451853_2973926 3300041512 Unclassified 1024
213 Ga0439431_0002289 3300041997 Bacteria 4224
214 Ga0439457_001334 3300042014 Bacteria 7408
215 Ga0439462_0001300 3300042015 Bacteria 5491
216 Ga0450899_017825 3300042135 Unclassified 819
217 Ga0466972_0000013 3300044658 Bacteria 229345
218 Ga0466972_0002053 3300044658 Bacteria 9861
219 Ga0466972_0009299 3300044658 Bacteria 4939
220 Ga0495629_0222473 3300046459 Bacteria 1302
221 Ga0495638_0074283 3300046460 Bacteria 2074
222 Ga0495650_0000087 3300046471 Bacteria 234870
223 Ga0495585_0000017 3300046492 Bacteria 164054
224 Ga0495585_0001591 3300046492 Bacteria 17564
225 Ga0495596_0030681 3300046500 Bacteria 2151
226 Ga0495583_0025953 3300046506 Bacteria 2916
227 Ga0495583_0121504 3300046506 Bacteria 1099
228 Ga0495606_0001935 3300046507 Bacteria 25671
229 Ga0495606_0028371 3300046507 Bacteria 3949
230 Ga0495610_0000762 3300046512 Bacteria 30369
231 Ga0495616_0004823 3300046513 Bacteria 8450
232 Ga0495616_0034425 3300046513 Bacteria 2631
233 Ga0495631_0005883 3300046518 Bacteria 6391
234 Ga0495632_0057975 3300046519 Bacteria 1889
235 Ga0495632_0154933 3300046519 Bacteria 1058
236 Ga0495648_0113420 3300046524 Bacteria 1470
237 Ga0495654_0286265 3300046530 Bacteria 676
238 Ga0495609_0011247 3300046538 Bacteria 4268
239 Ga0495633_0000097 3300046558 Bacteria 117316
240 Ga0495633_0004853 3300046558 Bacteria 8413
241 Ga0495668_0000009 3300046616 Bacteria 492623
242 Ga0495611_0000095 3300046648 Bacteria 61293
243 Ga0495625_0000008 3300046660 Bacteria 536165
244 Ga0495625_0000097 3300046660 Bacteria 141191
245 Ga0495625_0014644 3300046660 Bacteria 6248
246 Ga0495625_0028246 3300046660 Bacteria 4209
247 Ga0495625_0080840 3300046660 Bacteria 2263
248 Ga0495661_0034945 3300046665 Bacteria 3158
249 Ga0495661_0268736 3300046665 Bacteria 864
250 Ga0495661_0327117 3300046665 Bacteria 760
251 Ga0495649_0000018 3300046694 Bacteria 220586
252 Ga0495687_000004 3300047443 Bacteria 779298
253 Ga0495687_000401 3300047443 Bacteria 53921
254 Ga0495687_000601 3300047443 Bacteria 42037
255 Ga0495679_034989 3300047446 Bacteria 1595
256 Ga0495673_0023942 3300047469 Bacteria 2960
257 Ga0495686_0161658 3300047472 Bacteria 1308
258 Ga0495682_0075575 3300049460 Bacteria 1212
259 Ga0501032_0600136 3300049569 Bacteria 700
260 Ga0501047_0015196 3300049581 Bacteria 7330
261 Ga0501047_0123412 3300049581 Bacteria 2470
262 Ga0501048_0034883 3300049582 Bacteria 3626
263 Ga0501207_013616 3300049654 Bacteria 1234
264 Ga0501217_000535 3300049661 Bacteria 6326
265 Ga0501236_000231 3300049670 Bacteria 5929
266 Ga0501240_040245 3300049673 Bacteria 775
267 Ga0501247_004031 3300049677 Bacteria 1593
268 Ga0501257_004068 3300049686 Bacteria 3176
269 Ga0501219_000186 3300049703 Bacteria 11481
270 Ga0501225_0004614 3300049705 Unclassified 4099
271 Ga0501241_004995 3300049758 Bacteria 2481
272 Ga0501264_001408 3300049761 Bacteria 2604
273 Ga0501044_0002880 3300049823 Bacteria 19578
274 Ga0501284_00062 3300050005 Bacteria 37409
275 nmdc:mga0k408_63581_c1 3300050493 Bacteria 2147
276 nmdc:mga05p37_7573_c1 3300050507 Bacteria 12807
277 nmdc:mga08y16_664_c1 3300050511 Bacteria 32444
278 Ga0500578_0000150 3300053086 Bacteria 83541
279 Ga0500578_0020026 3300053086 Bacteria 4299
280 Ga0500643_079647 3300053087 Unclassified 901
281 Ga0500644_0075768 3300053088 Bacteria 1224
282 Ga0500644_0129502 3300053088 Bacteria 992
283 Ga0500646_0017166 3300053090 Bacteria 1895
284 Ga0500583_0000188 3300053092 Bacteria 24682
285 Ga0500583_0004654 3300053092 Bacteria 4504
286 Ga0500583_0009484 3300053092 Bacteria 3562
287 Ga0500583_0022910 3300053092 Bacteria 2625
288 Ga0500583_0113468 3300053092 Bacteria 1336
289 Ga0500651_0460622 3300053093 Bacteria 706
290 Ga0500648_306456 3300053097 Unclassified 691
291 Ga0500555_024963 3300053103 Bacteria 1710
292 Ga0500562_000005 3300053108 Bacteria 266746
293 Ga0500572_023263 3300053111 Bacteria 1662
294 Ga0500608_033435 3300053122 Bacteria 2446
295 Ga0500614_013256 3300053123 Bacteria 1809
296 Ga0500618_000026 3300053125 Bacteria 148672
297 Ga0500618_025837 3300053125 Bacteria 1405
298 Ga0500642_0079053 3300053130 Bacteria 1507
299 Ga0500652_013206 3300053131 Bacteria 2919
300 Ga0500652_085625 3300053131 Bacteria 1314
301 Ga0500652_114574 3300053131 Bacteria 1127
302 Ga0500655_022286 3300053133 Bacteria 1191
303 Ga0500573_0264643 3300053140 Bacteria 878
304 Ga0500589_078983 3300053147 Bacteria 1472
305 Ga0500616_0023585 3300053153 Unclassified 3426
306 Ga0500616_0052160 3300053153 Bacteria 2152
307 Ga0500616_0143850 3300053153 Unclassified 1111
308 Ga0500619_121244 3300053154 Bacteria 891
309 Ga0500622_0005641 3300053156 Bacteria 7455
310 Ga0500622_0007545 3300053156 Bacteria 6166
311 Ga0500622_0010643 3300053156 Bacteria 5038
312 Ga0500622_0015277 3300053156 Bacteria 4115
313 Ga0500622_0020919 3300053156 Bacteria 3472
314 Ga0500633_0106121 3300053160 Bacteria 1038
315 Ga0500639_152425 3300053163 Unclassified 1063
316 Ga0500637_0165561 3300053178 Bacteria 1273
317 Ga0500645_012065 3300053730 Bacteria 2800
318 Ga0500645_016819 3300053730 Bacteria 2299
319 Ga0500661_046584 3300055283 Bacteria 771

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003322 rootL2_10272950 rootL2_102729502 153
2 3300053087 Ga0500643_079647 Ga0500643_079647_17_565 167
3 3300055283 Ga0500661_046584 Ga0500661_046584_250_753 167
4 3300003320 rootH2_10313174 rootH2_103131742 169
5 3300003323 rootH1_10312626 rootH1_103126262 172
6 3300002741 JGI25157J39369_1015165 JGI25157J39369_10151652 178
7 3300003322 rootL2_10030809 rootL2_100308092 178
8 3300005539 Ga0068853_100048365 Ga0068853_1000483653 178
9 3300005539 Ga0068853_100782227 Ga0068853_1007822271 178
10 3300006195 Ga0075366_10341634 Ga0075366_103416341 178
11 3300053093 Ga0500651_0460622 Ga0500651_0460622_16_552 178
12 3300053160 Ga0500633_0106121 Ga0500633_0106121_16_552 178
13 3300003316 rootH1_10008019 rootH1_100080194 185
14 3300003322 rootL2_10107076 rootL2_101070768 185
15 3300003323 rootH1_10120933 rootH1_101209334 185
16 3300005614 Ga0068856_100233360 Ga0068856_1002333602 185
17 3300031251 Ga0265327_10006758 Ga0265327_100067585 185
18 3300031456 Ga0307513_10418913 Ga0307513_104189132 185
19 3300053092 Ga0500583_0022910 Ga0500583_0022910_1332_1919 185
20 3300053131 Ga0500652_114574 Ga0500652_114574_16_615 185
21 3300053153 Ga0500616_0023585 Ga0500616_0023585_1489_2088 185
22 3300053156 Ga0500622_0010643 Ga0500622_0010643_3507_4106 185
23 3300053156 Ga0500622_0015277 Ga0500622_0015277_636_1223 185
24 3300053730 Ga0500645_012065 Ga0500645_012065_889_1476 185
25 3300001989 JGI24739J22299_10000991 JGI24739J22299_100009917 186
26 3300001989 JGI24739J22299_10003764 JGI24739J22299_100037647 186
27 3300001990 JGI24737J22298_10000568 JGI24737J22298_1000056819 186
28 3300002067 JGI24735J21928_10000008 JGI24735J21928_10000008235 186
29 3300002737 JGI25162J39368_1000046 JGI25162J39368_100004668 186
30 3300003316 rootH1_10013502 rootH1_100135023 186
31 3300003316 rootH1_10047104 rootH1_1004710410 186
32 3300003320 rootH2_10067950 rootH2_100679503 186
33 3300003320 rootH2_10151386 rootH2_101513862 186
34 3300003320 rootH2_10202314 rootH2_102023143 186
35 3300003320 rootH2_10209674 rootH2_102096742 186
36 3300003322 rootL2_10000565 rootL2_100005655 186
37 3300003322 rootL2_10002427 rootL2_100024277 186
38 3300003322 rootL2_10160063 rootL2_101600635 186
39 3300003322 rootL2_10182105 rootL2_101821054 186
40 3300003322 rootL2_10187106 rootL2_101871063 186
41 3300003322 rootL2_10287374 rootL2_102873743 186
42 3300003323 rootH1_10010281 rootH1_100102815 186
43 3300003323 rootH1_10011906 rootH1_1001190616 186
44 3300003323 rootH1_10055582 rootH1_100555823 186
45 3300003323 rootH1_10072350 rootH1_100723509 186
46 3300003323 rootH1_10333144 rootH1_103331443 186
47 3300003771 Ga0055526_1004781 Ga0055526_10047813 186
48 3300003771 Ga0055526_1020440 Ga0055526_10204403 186
49 3300003790 Ga0055528_1000180 Ga0055528_100018013 186
50 3300003791 Ga0055530_10008238 Ga0055530_100082384 186
51 3300004625 Ga0055543_1003696 Ga0055543_10036964 186
52 3300005262 Ga0065165_1000019 Ga0065165_1000019163 186
53 3300005262 Ga0065165_1000724 Ga0065165_100072412 186
54 3300005288 Ga0065714_10094607 Ga0065714_100946072 186
55 3300005335 Ga0070666_10025366 Ga0070666_100253662 186
56 3300005338 Ga0068868_100073715 Ga0068868_1000737152 186
57 3300005338 Ga0068868_101054065 Ga0068868_1010540651 186
58 3300005355 Ga0070671_100268200 Ga0070671_1002682001 186
59 3300005367 Ga0070667_100432204 Ga0070667_1004322042 186
60 3300005535 Ga0070684_100515741 Ga0070684_1005157412 186
61 3300005539 Ga0068853_100090240 Ga0068853_1000902402 186
62 3300005539 Ga0068853_100134298 Ga0068853_1001342983 186
63 3300005548 Ga0070665_100000008 Ga0070665_10000000836 186
64 3300005563 Ga0068855_100008221 Ga0068855_1000082218 186
65 3300005577 Ga0068857_100000507 Ga0068857_10000050714 186
66 3300005578 Ga0068854_100006282 Ga0068854_1000062824 186
67 3300005578 Ga0068854_100052564 Ga0068854_1000525643 186
68 3300005614 Ga0068856_100020886 Ga0068856_1000208862 186
69 3300005614 Ga0068856_100689743 Ga0068856_1006897432 186
70 3300005616 Ga0068852_100000123 Ga0068852_1000001238 186
71 3300005618 Ga0068864_100689455 Ga0068864_1006894552 186
72 3300005843 Ga0068860_100000039 Ga0068860_10000003990 186
73 3300005843 Ga0068860_100001055 Ga0068860_10000105513 186
74 3300006195 Ga0075366_10033199 Ga0075366_100331994 186
75 3300006195 Ga0075366_10083526 Ga0075366_100835261 186
76 3300006195 Ga0075366_10329703 Ga0075366_103297031 186
77 3300006353 Ga0075370_10195387 Ga0075370_101953872 186
78 3300006358 Ga0068871_100290987 Ga0068871_1002909873 186
79 3300009093 Ga0105240_10000165 Ga0105240_1000016517 186
80 3300009093 Ga0105240_10001248 Ga0105240_1000124823 186
81 3300009093 Ga0105240_10006266 Ga0105240_100062665 186
82 3300009093 Ga0105240_10170146 Ga0105240_101701463 186
83 3300009093 Ga0105240_10173109 Ga0105240_101731093 186
84 3300009093 Ga0105240_10226349 Ga0105240_102263492 186
85 3300009093 Ga0105240_10769091 Ga0105240_107690912 186
86 3300009094 Ga0111539_10001121 Ga0111539_1000112119 186
87 3300009147 Ga0114129_10006980 Ga0114129_100069801 186
88 3300009174 Ga0105241_10006481 Ga0105241_100064812 186
89 3300009174 Ga0105241_10056872 Ga0105241_100568723 186
90 3300009174 Ga0105241_10167962 Ga0105241_101679623 186
91 3300009174 Ga0105241_10308057 Ga0105241_103080572 186
92 3300009174 Ga0105241_10449474 Ga0105241_104494742 186
93 3300009545 Ga0105237_10000126 Ga0105237_1000012672 186
94 3300009545 Ga0105237_10001477 Ga0105237_1000147717 186
95 3300009545 Ga0105237_10001523 Ga0105237_1000152320 186
96 3300009545 Ga0105237_10002812 Ga0105237_100028125 186
97 3300009545 Ga0105237_10005524 Ga0105237_1000552413 186
98 3300009545 Ga0105237_10011842 Ga0105237_100118424 186
99 3300009545 Ga0105237_10189666 Ga0105237_101896662 186
100 3300009545 Ga0105237_10557661 Ga0105237_105576611 186
101 3300009545 Ga0105237_11326659 Ga0105237_113266591 186
102 3300009551 Ga0105238_10001245 Ga0105238_1000124513 186
103 3300009551 Ga0105238_10262476 Ga0105238_102624762 186
104 3300009551 Ga0105238_10475993 Ga0105238_104759932 186
105 3300009551 Ga0105238_10970315 Ga0105238_109703151 186
106 3300009553 Ga0105249_10181651 Ga0105249_101816513 186
107 3300009553 Ga0105249_10278453 Ga0105249_102784532 186
108 3300009553 Ga0105249_11812037 Ga0105249_118120371 186
109 3300010375 Ga0105239_10000332 Ga0105239_1000033248 186
110 3300010375 Ga0105239_10001657 Ga0105239_1000165736 186
111 3300010375 Ga0105239_10002251 Ga0105239_1000225113 186
112 3300010375 Ga0105239_10003550 Ga0105239_1000355016 186
113 3300010375 Ga0105239_10019076 Ga0105239_100190763 186
114 3300010375 Ga0105239_10488659 Ga0105239_104886592 186
115 3300011119 Ga0105246_10043637 Ga0105246_100436372 186
116 3300013102 Ga0157371_10015737 Ga0157371_100157372 186
117 3300013102 Ga0157371_10017987 Ga0157371_100179877 186
118 3300013102 Ga0157371_11005612 Ga0157371_110056121 186
119 3300013104 Ga0157370_10013809 Ga0157370_100138092 186
120 3300013104 Ga0157370_10757141 Ga0157370_107571411 186
121 3300013105 Ga0157369_10829605 Ga0157369_108296051 186
122 3300013105 Ga0157369_11112873 Ga0157369_111128731 186
123 3300013105 Ga0157369_11242117 Ga0157369_112421171 186
124 3300013296 Ga0157374_10008418 Ga0157374_100084183 186
125 3300013297 Ga0157378_10351525 Ga0157378_103515252 186
126 3300013306 Ga0163162_10000203 Ga0163162_100002033 186
127 3300013306 Ga0163162_10002007 Ga0163162_1000200721 186
128 3300013306 Ga0163162_10524415 Ga0163162_105244152 186
129 3300013306 Ga0163162_11344810 Ga0163162_113448101 186
130 3300013307 Ga0157372_10000441 Ga0157372_1000044128 186
131 3300013307 Ga0157372_10002053 Ga0157372_1000205318 186
132 3300013307 Ga0157372_10701906 Ga0157372_107019062 186
133 3300013307 Ga0157372_10964473 Ga0157372_109644731 186
134 3300013308 Ga0157375_10012207 Ga0157375_100122071 186
135 3300013308 Ga0157375_10198930 Ga0157375_101989301 186
136 3300014325 Ga0163163_10403946 Ga0163163_104039462 186
137 3300017792 Ga0163161_10022557 Ga0163161_100225575 186
138 3300017792 Ga0163161_10167396 Ga0163161_101673962 186
139 3300025233 Ga0209437_100070 Ga0209437_100070142 186
140 3300025246 Ga0209646_1000004 Ga0209646_100000468 186
141 3300025246 Ga0209646_1002262 Ga0209646_10022623 186
142 3300025250 Ga0209026_1000132 Ga0209026_100013218 186
143 3300025273 Ga0209673_1000042 Ga0209673_100004275 186
144 3300025295 Ga0209564_1001966 Ga0209564_10019668 186
145 3300025297 Ga0209758_1003644 Ga0209758_10036447 186
146 3300025297 Ga0209758_1004920 Ga0209758_10049204 186
147 3300025298 Ga0209050_1000308 Ga0209050_100030843 186
148 3300025302 Ga0207426_1002967 Ga0207426_10029672 186
149 3300025303 Ga0209051_1041380 Ga0209051_10413802 186
150 3300025304 Ga0209257_1001059 Ga0209257_100105932 186
151 3300025903 Ga0207680_10010408 Ga0207680_100104082 186
152 3300025904 Ga0207647_10010723 Ga0207647_100107233 186
153 3300025904 Ga0207647_10021385 Ga0207647_100213853 186
154 3300025911 Ga0207654_10001652 Ga0207654_100016524 186
155 3300025911 Ga0207654_10236695 Ga0207654_102366951 186
156 3300025913 Ga0207695_10000027 Ga0207695_1000002793 186
157 3300025913 Ga0207695_10000247 Ga0207695_1000024723 186
158 3300025913 Ga0207695_10003194 Ga0207695_1000319418 186
159 3300025913 Ga0207695_10018360 Ga0207695_100183602 186
160 3300025913 Ga0207695_10096908 Ga0207695_100969082 186
161 3300025913 Ga0207695_10173548 Ga0207695_101735482 186
162 3300025913 Ga0207695_10191338 Ga0207695_101913382 186
163 3300025914 Ga0207671_10000560 Ga0207671_1000056036 186
164 3300025914 Ga0207671_10000646 Ga0207671_100006469 186
165 3300025914 Ga0207671_10000960 Ga0207671_1000096017 186
166 3300025914 Ga0207671_10002165 Ga0207671_1000216514 186
167 3300025914 Ga0207671_10007859 Ga0207671_100078599 186
168 3300025914 Ga0207671_10009126 Ga0207671_100091263 186
169 3300025914 Ga0207671_10017456 Ga0207671_100174565 186
170 3300025914 Ga0207671_10100309 Ga0207671_101003092 186
171 3300025924 Ga0207694_10024653 Ga0207694_100246532 186
172 3300025924 Ga0207694_10082603 Ga0207694_100826034 186
173 3300025924 Ga0207694_10332775 Ga0207694_103327752 186
174 3300025924 Ga0207694_10506689 Ga0207694_105066892 186
175 3300025931 Ga0207644_10008662 Ga0207644_100086627 186
176 3300025949 Ga0207667_10000337 Ga0207667_1000033745 186
177 3300025949 Ga0207667_10062699 Ga0207667_100626994 186
178 3300025961 Ga0207712_10300338 Ga0207712_103003381 186
179 3300025981 Ga0207640_10080852 Ga0207640_100808521 186
180 3300025981 Ga0207640_10243439 Ga0207640_102434392 186
181 3300026023 Ga0207677_10184382 Ga0207677_101843822 186
182 3300026023 Ga0207677_11145717 Ga0207677_111457171 186
183 3300026041 Ga0207639_10046496 Ga0207639_100464962 186
184 3300026041 Ga0207639_10138797 Ga0207639_101387972 186
185 3300026041 Ga0207639_10870650 Ga0207639_108706501 186
186 3300026041 Ga0207639_11031566 Ga0207639_110315661 186
187 3300026078 Ga0207702_10254168 Ga0207702_102541682 186
188 3300026078 Ga0207702_10808898 Ga0207702_108088982 186
189 3300026095 Ga0207676_10460116 Ga0207676_104601162 186
190 3300026116 Ga0207674_10002587 Ga0207674_1000258715 186
191 3300026116 Ga0207674_10582752 Ga0207674_105827522 186
192 3300026142 Ga0207698_10000290 Ga0207698_1000029022 186
193 3300026142 Ga0207698_11073751 Ga0207698_110737511 186
194 3300028379 Ga0268266_10000016 Ga0268266_1000001635 186
195 3300028381 Ga0268264_10000080 Ga0268264_10000080119 186
196 3300028381 Ga0268264_10000532 Ga0268264_1000053221 186
197 3300028786 Ga0307517_10003919 Ga0307517_100039193 186
198 3300028786 Ga0307517_10193647 Ga0307517_101936472 186
199 3300030521 Ga0307511_10000917 Ga0307511_100009177 186
200 3300031456 Ga0307513_10058329 Ga0307513_100583293 186
201 3300031456 Ga0307513_10337076 Ga0307513_103370762 186
202 3300031507 Ga0307509_10433223 Ga0307509_104332231 186
203 3300031548 Ga0307408_100168079 Ga0307408_1001680792 186
204 3300031731 Ga0307405_10882652 Ga0307405_108826521 186
205 3300033180 Ga0307510_10006258 Ga0307510_100062583 186
206 3300035116 Ga0373945_0056402 Ga0373945_0056402_623_1213 186
207 3300035692 Ga0373935_0125054 Ga0373935_0125054_448_1038 186
208 3300035695 Ga0373927_0082990 Ga0373927_0082990_205_795 186
209 3300037068 Ga0373925_0222246 Ga0373925_0222246_837_1427 186
210 3300038443 Ga0395901_0338415 Ga0395901_0338415_22_612 186
211 3300041404 Ga0439436_0003908 Ga0439436_0003908_554_1144 186
212 3300041406 Ga0439439_0002058 Ga0439439_0002058_3377_3967 186
213 3300041452 Ga0451793_1825578 Ga0451793_1825578_701_1291 186
214 3300041459 Ga0451800_0075835 Ga0451800_0075835_14_604 186
215 3300041463 Ga0451804_0943664 Ga0451804_0943664_111_701 186
216 3300041486 Ga0451807_0517279 Ga0451807_0517279_366_956 186
217 3300041492 Ga0451835_0398742 Ga0451835_0398742_27_617 186
218 3300041494 Ga0451837_1852020 Ga0451837_1852020_100_690 186
219 3300041498 Ga0451841_0010911 Ga0451841_0010911_254_844 186
220 3300041511 Ga0451855_1129279 Ga0451855_1129279_38_628 186
221 3300041512 Ga0451853_2973926 Ga0451853_2973926_354_944 186
222 3300041997 Ga0439431_0002289 Ga0439431_0002289_3217_3807 186
223 3300042014 Ga0439457_001334 Ga0439457_001334_165_755 186
224 3300042015 Ga0439462_0001300 Ga0439462_0001300_2396_2986 186
225 3300042135 Ga0450899_017825 Ga0450899_017825_80_670 186
226 3300044658 Ga0466972_0000013 Ga0466972_0000013_37150_37740 186
227 3300044658 Ga0466972_0002053 Ga0466972_0002053_1953_2609 186
228 3300044658 Ga0466972_0009299 Ga0466972_0009299_2884_3474 186
229 3300046459 Ga0495629_0222473 Ga0495629_0222473_257_847 186
230 3300046460 Ga0495638_0074283 Ga0495638_0074283_606_1196 186
231 3300046471 Ga0495650_0000087 Ga0495650_0000087_223132_223722 186
232 3300046492 Ga0495585_0000017 Ga0495585_0000017_131894_132484 186
233 3300046492 Ga0495585_0001591 Ga0495585_0001591_2576_3166 186
234 3300046500 Ga0495596_0030681 Ga0495596_0030681_1252_1842 186
235 3300046506 Ga0495583_0025953 Ga0495583_0025953_1275_1865 186
236 3300046506 Ga0495583_0121504 Ga0495583_0121504_21_611 186
237 3300046507 Ga0495606_0001935 Ga0495606_0001935_10819_11409 186
238 3300046507 Ga0495606_0028371 Ga0495606_0028371_1000_1590 186
239 3300046512 Ga0495610_0000762 Ga0495610_0000762_4307_4897 186
240 3300046513 Ga0495616_0004823 Ga0495616_0004823_1143_1733 186
241 3300046513 Ga0495616_0034425 Ga0495616_0034425_1349_1939 186
242 3300046518 Ga0495631_0005883 Ga0495631_0005883_5654_6244 186
243 3300046519 Ga0495632_0057975 Ga0495632_0057975_714_1304 186
244 3300046519 Ga0495632_0154933 Ga0495632_0154933_381_971 186
245 3300046524 Ga0495648_0113420 Ga0495648_0113420_589_1179 186
246 3300046530 Ga0495654_0286265 Ga0495654_0286265_21_611 186
247 3300046538 Ga0495609_0011247 Ga0495609_0011247_1172_1762 186
248 3300046558 Ga0495633_0000097 Ga0495633_0000097_110949_111539 186
249 3300046558 Ga0495633_0004853 Ga0495633_0004853_5264_5854 186
250 3300046616 Ga0495668_0000009 Ga0495668_0000009_468743_469333 186
251 3300046648 Ga0495611_0000095 Ga0495611_0000095_34382_34972 186
252 3300046660 Ga0495625_0000008 Ga0495625_0000008_345725_346315 186
253 3300046660 Ga0495625_0000097 Ga0495625_0000097_110318_110908 186
254 3300046660 Ga0495625_0014644 Ga0495625_0014644_3034_3624 186
255 3300046660 Ga0495625_0028246 Ga0495625_0028246_599_1189 186
256 3300046660 Ga0495625_0080840 Ga0495625_0080840_1022_1612 186
257 3300046665 Ga0495661_0034945 Ga0495661_0034945_2264_2854 186
258 3300046665 Ga0495661_0268736 Ga0495661_0268736_255_845 186
259 3300046665 Ga0495661_0327117 Ga0495661_0327117_90_680 186
260 3300046694 Ga0495649_0000018 Ga0495649_0000018_189849_190439 186
261 3300047443 Ga0495687_000004 Ga0495687_000004_116927_117562 186
262 3300047443 Ga0495687_000401 Ga0495687_000401_53151_53741 186
263 3300047443 Ga0495687_000601 Ga0495687_000601_23042_23632 186
264 3300047446 Ga0495679_034989 Ga0495679_034989_575_1165 186
265 3300047469 Ga0495673_0023942 Ga0495673_0023942_575_1165 186
266 3300047472 Ga0495686_0161658 Ga0495686_0161658_579_1169 186
267 3300049460 Ga0495682_0075575 Ga0495682_0075575_412_1002 186
268 3300049569 Ga0501032_0600136 Ga0501032_0600136_31_648 186
269 3300049581 Ga0501047_0015196 Ga0501047_0015196_2021_2638 186
270 3300049581 Ga0501047_0123412 Ga0501047_0123412_667_1284 186
271 3300049582 Ga0501048_0034883 Ga0501048_0034883_2371_2988 186
272 3300049654 Ga0501207_013616 Ga0501207_013616_515_1144 186
273 3300049661 Ga0501217_000535 Ga0501217_000535_2879_3508 186
274 3300049670 Ga0501236_000231 Ga0501236_000231_4514_5113 186
275 3300049673 Ga0501240_040245 Ga0501240_040245_91_720 186
276 3300049677 Ga0501247_004031 Ga0501247_004031_463_1092 186
277 3300049686 Ga0501257_004068 Ga0501257_004068_842_1441 186
278 3300049703 Ga0501219_000186 Ga0501219_000186_1159_1749 186
279 3300049705 Ga0501225_0004614 Ga0501225_0004614_2696_3286 186
280 3300049758 Ga0501241_004995 Ga0501241_004995_1436_2026 186
281 3300049761 Ga0501264_001408 Ga0501264_001408_1002_1601 186
282 3300049823 Ga0501044_0002880 Ga0501044_0002880_9202_9819 186
283 3300050005 Ga0501284_00062 Ga0501284_00062_34314_34904 186
284 3300050493 nmdc:mga0k408_63581_c1 nmdc:mga0k408_63581_c1_1070_1660 186
285 3300050507 nmdc:mga05p37_7573_c1 nmdc:mga05p37_7573_c1_394_984 186
286 3300050511 nmdc:mga08y16_664_c1 nmdc:mga08y16_664_c1_8625_9221 186
287 3300053086 Ga0500578_0000150 Ga0500578_0000150_31030_31647 186
288 3300053086 Ga0500578_0020026 Ga0500578_0020026_390_1007 186
289 3300053088 Ga0500644_0075768 Ga0500644_0075768_255_845 186
290 3300053088 Ga0500644_0129502 Ga0500644_0129502_200_790 186
291 3300053090 Ga0500646_0017166 Ga0500646_0017166_1168_1758 186
292 3300053092 Ga0500583_0000188 Ga0500583_0000188_21262_21852 186
293 3300053092 Ga0500583_0004654 Ga0500583_0004654_1994_2584 186
294 3300053092 Ga0500583_0009484 Ga0500583_0009484_2221_2856 186
295 3300053092 Ga0500583_0113468 Ga0500583_0113468_675_1265 186
296 3300053097 Ga0500648_306456 Ga0500648_306456_68_658 186
297 3300053103 Ga0500555_024963 Ga0500555_024963_288_878 186
298 3300053108 Ga0500562_000005 Ga0500562_000005_177438_178028 186
299 3300053111 Ga0500572_023263 Ga0500572_023263_845_1462 186
300 3300053122 Ga0500608_033435 Ga0500608_033435_375_965 186
301 3300053123 Ga0500614_013256 Ga0500614_013256_290_880 186
302 3300053125 Ga0500618_000026 Ga0500618_000026_121471_122061 186
303 3300053125 Ga0500618_025837 Ga0500618_025837_304_894 186
304 3300053130 Ga0500642_0079053 Ga0500642_0079053_797_1432 186
305 3300053131 Ga0500652_013206 Ga0500652_013206_369_959 186
306 3300053131 Ga0500652_085625 Ga0500652_085625_640_1230 186
307 3300053133 Ga0500655_022286 Ga0500655_022286_243_836 186
308 3300053140 Ga0500573_0264643 Ga0500573_0264643_70_660 186
309 3300053147 Ga0500589_078983 Ga0500589_078983_623_1213 186
310 3300053153 Ga0500616_0052160 Ga0500616_0052160_884_1474 186
311 3300053153 Ga0500616_0143850 Ga0500616_0143850_370_987 186
312 3300053154 Ga0500619_121244 Ga0500619_121244_211_801 186
313 3300053156 Ga0500622_0005641 Ga0500622_0005641_4922_5512 186
314 3300053156 Ga0500622_0007545 Ga0500622_0007545_992_1627 186
315 3300053156 Ga0500622_0020919 Ga0500622_0020919_2544_3134 186
316 3300053163 Ga0500639_152425 Ga0500639_152425_32_622 186
317 3300053178 Ga0500637_0165561 Ga0500637_0165561_294_884 186
318 3300053730 Ga0500645_016819 Ga0500645_016819_546_1136 186
319 iso_pu_bacteria 2599185184 2599476766 186
320 iso_pu_bacteria 2738541283 2738754749 186
321 iso_pu_bacteria 2883068021 2883073035 186
322 iso_pu_bacteria 2896085136 2896087540 186
323 iso_pu_bacteria 2928078545 2928078672 186
324 iso_pu_bacteria 2928147474 2928151650 186
325 iso_pu_bacteria 2929921140 2929922253 186
326 iso_pu_bacteria 2932082852 2932084283 186
327 iso_pu_bacteria 8003151029 8003154792 186

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

42

88

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4me9-assembly1.cif.gz_B crystal structure of a transcriptional regulator, tetr family (bce_2991) from bacillus cereus atcc 10987 at 2.50 a resolution 0.8659 2 186
3qkx-assembly1.cif.gz_A crystal structure of a tetr-family transcriptional regulator (hi0893) from haemophilus influenzae rd at 2.35 a resolution 0.8642 2 186
3pas-assembly1.cif.gz_A crystal structure of a tetr family transcription regulator (maqu_1417) from marinobacter aquaeolei vt8 at 1.90 a resolution 0.8373 2 184
6en8-assembly1.cif.gz_B safadr in complex with dsdna 0.8213 2 186
3qkx-assembly1.cif.gz_B crystal structure of a tetr-family transcriptional regulator (hi0893) from haemophilus influenzae rd at 2.35 a resolution 0.8174 2 186
ID Description Score Start End Superfamily
2fq4A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9822 2 40 1.10.10.60
3br6E01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.964 2 44 1.10.10.60
3br1E01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9588 2 44 1.10.10.60
2zb9A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9581 2 40 1.10.10.60
3br2E01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9568 2 44 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A2N4XAE7-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9824 2 186 GO:0003677
AF-A0A4R8AZ69-F1-model_v4 TetR family transcriptional regulator 0.9765 2 186 GO:0003677
AF-A0A2N4XAE7-F1-model_v4 TetR/AcrR family transcriptional regulator 0.972 2 186 GO:0003677
AF-A0A267TCB6-F1-model_v4 TetR family transcriptional regulator 0.9704 2 186 GO:0000976
GO:0003700
AF-A0A4R8AZ69-F1-model_v4 TetR family transcriptional regulator 0.9662 2 186 GO:0003677

Feature Viewer

pLDDT pTM Quality
94.45 0.85 High
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Predicted Structure (AlphaFold2)

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