F408189

General Info

Members Datasets Scaffolds Average Seq Length
326 182 652 248

Family's Representative Sequence

Representative Sequence 3300005466|Ga0070685_10065740|Ga0070685_100657401
Length 262
Sequence MSTSSDISRPLPGRRRVMAGNWKMYKTPSETRAFFAAFLPMIGDAAHCDVVIAPPFTSIATAVEAAKGSRVAISGQNNHWQKEGAFTGEVSPQMLVEVGCTHVIVGHSERRQYANETDDMVSQKSRAALAAGLTPIVCLGENFTERETGKTQEVLSQQFIGGPGALTAEEFSRILLAYEPVWAIGTGRTATPEIAAAAHRFLRQCVRDQFSPEAAVSVRILYGGSVKPDNIQGLMAQEELDGTLVGGASLDAKSFAAIVNTR

Samples

Sample ID Description Type Environment
1 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
73 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
112 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
113 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
117 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
118 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
119 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
120 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
121 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
122 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
123 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
124 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
125 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
126 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
127 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
128 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
131 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
132 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
133 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
134 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
135 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
138 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
139 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
140 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
141 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
144 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
145 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
146 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
147 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
148 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
149 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
150 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
151 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
152 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
153 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
154 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
155 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
156 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
157 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
158 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
159 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
160 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
161 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
162 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
163 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
164 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
165 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
166 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
167 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
168 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
169 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
170 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
171 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
172 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
175 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
176 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
180 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
181 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
182 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.69
Metatranscriptomes 0.31
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.31
Nodule 0
Rhizoplane 3.37
Rhizosphere 91.41
Stem 0
Stem Tuber 0
Unclassified 10.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070685_10065740 3300005466 Bacteria 2135
2 Ga0070690_100260786 3300005330 Bacteria 1229
3 Ga0070666_10005326 3300005335 Bacteria 7885
4 Ga0070666_10208709 3300005335 Bacteria 1375
5 Ga0070680_100264026 3300005336 Bacteria 1457
6 Ga0068868_100246893 3300005338 Bacteria 1501
7 Ga0068868_100604312 3300005338 Bacteria 972
8 Ga0070660_100056998 3300005339 Bacteria 3025
9 Ga0070661_100118533 3300005344 Bacteria 1981
10 Ga0070668_100212392 3300005347 Unclassified 1592
11 Ga0070673_100056102 3300005364 Bacteria 3106
12 Ga0070659_100049904 3300005366 Bacteria 3291
13 Ga0070659_100069952 3300005366 Bacteria 2787
14 Ga0070667_100051283 3300005367 Bacteria 3478
15 Ga0070667_100184826 3300005367 Bacteria 1844
16 Ga0070713_100010751 3300005436 Bacteria 6629
17 Ga0070713_100134567 3300005436 Bacteria 2183
18 Ga0070711_100072066 3300005439 Bacteria 2436
19 Ga0070708_100024653 3300005445 Bacteria 5137
20 Ga0070708_100365928 3300005445 Bacteria 1359
21 Ga0070678_100084003 3300005456 Unclassified 2422
22 Ga0070681_10138745 3300005458 Bacteria 2361
23 Ga0070681_10394623 3300005458 Bacteria 1295
24 Ga0068867_100464880 3300005459 Bacteria 1081
25 Ga0070706_100058247 3300005467 Bacteria 3565
26 Ga0070706_100224931 3300005467 Bacteria 1751
27 Ga0070707_100017929 3300005468 Bacteria 6657
28 Ga0070707_100092989 3300005468 Bacteria 2919
29 Ga0070707_100111196 3300005468 Bacteria 2657
30 Ga0070707_100141363 3300005468 Bacteria 2343
31 Ga0070707_100716993 3300005468 Bacteria 963
32 Ga0070698_100002236 3300005471 Bacteria 21402
33 Ga0070698_100049946 3300005471 Bacteria 4267
34 Ga0070699_100188681 3300005518 Bacteria 1831
35 Ga0070679_100059838 3300005530 Bacteria 3796
36 Ga0070697_100001442 3300005536 Bacteria 18073
37 Ga0068853_100004428 3300005539 Bacteria 10875
38 Ga0068853_100155367 3300005539 Bacteria 2061
39 Ga0070672_100306238 3300005543 Bacteria 1348
40 Ga0070693_100005716 3300005547 Bacteria 6005
41 Ga0070665_100002167 3300005548 Bacteria 21907
42 Ga0070665_100382087 3300005548 Bacteria 1416
43 Ga0068855_100059013 3300005563 Bacteria 4490
44 Ga0068855_100067901 3300005563 Bacteria 4152
45 Ga0068855_100152488 3300005563 Bacteria 2627
46 Ga0068857_100017799 3300005577 Bacteria 6230
47 Ga0068857_100019435 3300005577 Bacteria 5965
48 Ga0068854_100487523 3300005578 Bacteria 1036
49 Ga0068856_100016169 3300005614 Bacteria 7216
50 Ga0068856_100041717 3300005614 Bacteria 4511
51 Ga0068856_100076482 3300005614 Bacteria 3317
52 Ga0068866_10129879 3300005718 Unclassified 1431
53 Ga0068863_100009928 3300005841 Bacteria 9269
54 Ga0068863_100098630 3300005841 Unclassified 2775
55 Ga0068863_100329939 3300005841 Unclassified 1483
56 Ga0068858_100083758 3300005842 Bacteria 2966
57 Ga0068860_100077575 3300005843 Bacteria 3159
58 Ga0068860_100194239 3300005843 Bacteria 1965
59 Ga0068860_100221729 3300005843 Bacteria 1836
60 Ga0068860_100435296 3300005843 Bacteria 1302
61 Ga0070717_10020617 3300006028 Bacteria 5188
62 Ga0070716_100017050 3300006173 Bacteria 3758
63 Ga0070716_100018215 3300006173 Unclassified 3654
64 Ga0070716_100044842 3300006173 Bacteria 2479
65 Ga0070716_100065314 3300006173 Bacteria 2119
66 Ga0070712_100102604 3300006175 Bacteria 2119
67 Ga0070712_100108099 3300006175 Unclassified 2070
68 Ga0070712_100199026 3300006175 Bacteria 1572
69 Ga0097621_100001678 3300006237 Bacteria 15137
70 Ga0097621_100081148 3300006237 Bacteria 2699
71 Ga0097621_100103333 3300006237 Bacteria 2400
72 Ga0097621_100234300 3300006237 Bacteria 1603
73 Ga0097621_100351576 3300006237 Bacteria 1311
74 Ga0068871_100002610 3300006358 Bacteria 12298
75 Ga0068871_100075719 3300006358 Bacteria 2778
76 Ga0068871_100259837 3300006358 Bacteria 1514
77 Ga0068871_100528467 3300006358 Unclassified 1066
78 Ga0075433_10503508 3300006852 Bacteria 1066
79 Ga0075434_100041645 3300006871 Bacteria 4550
80 Ga0068865_100146869 3300006881 Bacteria 1784
81 Ga0075436_100032588 3300006914 Bacteria 3592
82 Ga0075435_100286722 3300007076 Bacteria 1406
83 Ga0099794_10013542 3300007265 Bacteria 3552
84 Ga0099794_10036044 3300007265 Bacteria 2336
85 Ga0099794_10104855 3300007265 Bacteria 1413
86 Ga0105240_10011779 3300009093 Bacteria 12149
87 Ga0105240_10371636 3300009093 Bacteria 1616
88 Ga0105240_10544187 3300009093 Bacteria 1285
89 Ga0105245_10005083 3300009098 Bacteria 11569
90 Ga0105245_10019857 3300009098 Bacteria 5890
91 Ga0105243_10058997 3300009148 Bacteria 3060
92 Ga0105241_10009852 3300009174 Bacteria 7022
93 Ga0105241_10092365 3300009174 Bacteria 2390
94 Ga0105241_10176965 3300009174 Bacteria 1766
95 Ga0105241_10453704 3300009174 Unclassified 1134
96 Ga0105242_10085562 3300009176 Bacteria 2644
97 Ga0105242_10088500 3300009176 Bacteria 2602
98 Ga0105248_10013796 3300009177 Bacteria 8893
99 Ga0105248_10015717 3300009177 Bacteria 8342
100 Ga0105248_10122379 3300009177 Bacteria 2935
101 Ga0105248_10147267 3300009177 Unclassified 2657
102 Ga0105248_10171055 3300009177 Bacteria 2448
103 Ga0105248_10710465 3300009177 Unclassified 1134
104 Ga0105237_10029368 3300009545 Bacteria 5589
105 Ga0105237_10155544 3300009545 Bacteria 2283
106 Ga0105237_10867555 3300009545 Bacteria 909
107 Ga0105238_10018855 3300009551 Bacteria 7023
108 Ga0105238_10020405 3300009551 Bacteria 6746
109 Ga0105238_10042179 3300009551 Unclassified 4621
110 Ga0105238_10045188 3300009551 Bacteria 4449
111 Ga0105238_10630840 3300009551 Bacteria 1081
112 Ga0105249_10923968 3300009553 Bacteria 940
113 Ga0099796_10038550 3300010159 Bacteria 1604
114 Ga0099796_10053796 3300010159 Bacteria 1405
115 Ga0105239_10029774 3300010375 Bacteria 6003
116 Ga0105239_10040089 3300010375 Bacteria 5131
117 Ga0105239_10046927 3300010375 Bacteria 4733
118 Ga0105239_10232392 3300010375 Bacteria 2069
119 Ga0105239_10708644 3300010375 Unclassified 1151
120 Ga0105239_10745969 3300010375 Bacteria 1120
121 Ga0105239_11072190 3300010375 Unclassified 927
122 Ga0157371_10047055 3300013102 Bacteria 3066
123 Ga0157370_10302309 3300013104 Bacteria 1477
124 Ga0157369_10032350 3300013105 Bacteria 5753
125 Ga0157369_10041589 3300013105 Bacteria 5016
126 Ga0157369_10441588 3300013105 Bacteria 1348
127 Ga0157369_10571698 3300013105 Bacteria 1167
128 Ga0157374_10028009 3300013296 Bacteria 5088
129 Ga0157374_10089833 3300013296 Bacteria 2928
130 Ga0157374_10620192 3300013296 Bacteria 1092
131 Ga0157378_10000230 3300013297 Bacteria 54474
132 Ga0157378_10001221 3300013297 Bacteria 23291
133 Ga0157378_10068098 3300013297 Bacteria 3191
134 Ga0157378_10238513 3300013297 Bacteria 1736
135 Ga0157378_10363033 3300013297 Bacteria 1418
136 Ga0163162_10688211 3300013306 Bacteria 1145
137 Ga0157372_10180123 3300013307 Bacteria 2446
138 Ga0157372_10596399 3300013307 Bacteria 1288
139 Ga0157375_10136822 3300013308 Bacteria 2574
140 Ga0157375_10191902 3300013308 Bacteria 2198
141 Ga0157375_10407297 3300013308 Bacteria 1526
142 Ga0163163_10001954 3300014325 Bacteria 17430
143 Ga0163163_10003683 3300014325 Bacteria 13047
144 Ga0163163_10063085 3300014325 Bacteria 3673
145 Ga0163163_10071273 3300014325 Bacteria 3462
146 Ga0163163_10191764 3300014325 Bacteria 2092
147 Ga0163163_10294299 3300014325 Bacteria 1676
148 Ga0157380_10176861 3300014326 Bacteria 1871
149 Ga0157379_10095563 3300014968 Bacteria 2666
150 Ga0157379_10196169 3300014968 Bacteria 1825
151 Ga0157376_10000036 3300014969 Bacteria 145496
152 Ga0157376_10000174 3300014969 Bacteria 44496
153 Ga0157376_10388004 3300014969 Bacteria 1347
154 Ga0213874_10022751 3300021377 Bacteria 1742
155 Ga0213876_10070203 3300021384 Bacteria 1851
156 Ga0213876_10227594 3300021384 Unclassified 991
157 Ga0213876_10245202 3300021384 Bacteria 952
158 Ga0213875_10001387 3300021388 Bacteria 15854
159 Ga0207642_10111162 3300025899 Unclassified 1395
160 Ga0207680_10045832 3300025903 Bacteria 2581
161 Ga0207680_10176538 3300025903 Bacteria 1442
162 Ga0207684_10112543 3300025910 Bacteria 2330
163 Ga0207654_10094720 3300025911 Bacteria 1828
164 Ga0207654_10162958 3300025911 Bacteria 1442
165 Ga0207654_10271340 3300025911 Unclassified 1144
166 Ga0207707_10030155 3300025912 Bacteria 4743
167 Ga0207707_10068805 3300025912 Bacteria 3085
168 Ga0207707_10123000 3300025912 Bacteria 2269
169 Ga0207695_10004312 3300025913 Bacteria 19494
170 Ga0207695_10130795 3300025913 Bacteria 2468
171 Ga0207695_10132665 3300025913 Bacteria 2447
172 Ga0207671_10039270 3300025914 Bacteria 3506
173 Ga0207671_10155954 3300025914 Unclassified 1766
174 Ga0207693_10071706 3300025915 Bacteria 2712
175 Ga0207693_10099596 3300025915 Unclassified 2279
176 Ga0207693_10106507 3300025915 Bacteria 2199
177 Ga0207663_10097252 3300025916 Bacteria 1968
178 Ga0207663_10157903 3300025916 Unclassified 1597
179 Ga0207660_10159405 3300025917 Bacteria 1740
180 Ga0207657_10186298 3300025919 Bacteria 1676
181 Ga0207649_10089373 3300025920 Bacteria 2014
182 Ga0207652_10249223 3300025921 Bacteria 1602
183 Ga0207646_10000404 3300025922 Bacteria 57874
184 Ga0207646_10070033 3300025922 Bacteria 3132
185 Ga0207646_10439421 3300025922 Bacteria 1177
186 Ga0207646_10579652 3300025922 Bacteria 1008
187 Ga0207681_10084952 3300025923 Bacteria 2245
188 Ga0207694_10066946 3300025924 Unclassified 2803
189 Ga0207694_10366711 3300025924 Bacteria 1194
190 Ga0207687_10022087 3300025927 Bacteria 4233
191 Ga0207687_10165930 3300025927 Bacteria 1699
192 Ga0207700_10008520 3300025928 Bacteria 6361
193 Ga0207700_10043566 3300025928 Bacteria 3297
194 Ga0207700_10163256 3300025928 Bacteria 1852
195 Ga0207686_10004432 3300025934 Bacteria 7529
196 Ga0207686_10025882 3300025934 Bacteria 3419
197 Ga0207704_10243931 3300025938 Bacteria 1344
198 Ga0207665_10006648 3300025939 Bacteria 7671
199 Ga0207665_10027675 3300025939 Unclassified 3746
200 Ga0207665_10177985 3300025939 Unclassified 1539
201 Ga0207691_10302309 3300025940 Bacteria 1374
202 Ga0207711_10038107 3300025941 Bacteria 4087
203 Ga0207711_10112999 3300025941 Bacteria 2418
204 Ga0207711_10357042 3300025941 Bacteria 1354
205 Ga0207711_10517614 3300025941 Unclassified 1112
206 Ga0207667_10007686 3300025949 Bacteria 12903
207 Ga0207667_10044307 3300025949 Bacteria 4715
208 Ga0207651_10200051 3300025960 Bacteria 1600
209 Ga0207668_10220381 3300025972 Unclassified 1523
210 Ga0207658_10195322 3300025986 Bacteria 1685
211 Ga0207658_10293399 3300025986 Bacteria 1398
212 Ga0207677_10275463 3300026023 Bacteria 1379
213 Ga0207703_10153768 3300026035 Bacteria 2008
214 Ga0207703_10649045 3300026035 Bacteria 1001
215 Ga0207639_10111091 3300026041 Bacteria 2234
216 Ga0207639_10512265 3300026041 Bacteria 1098
217 Ga0207702_10478374 3300026078 Bacteria 1212
218 Ga0207641_10003159 3300026088 Bacteria 14756
219 Ga0207641_10090862 3300026088 Unclassified 2671
220 Ga0207676_10096837 3300026095 Unclassified 2436
221 Ga0207674_10010926 3300026116 Bacteria 10218
222 Ga0207674_10040735 3300026116 Unclassified 4809
223 Ga0209588_1001230 3300027671 Bacteria 6618
224 Ga0209588_1055088 3300027671 Bacteria 1285
225 Ga0268266_10000267 3300028379 Bacteria 86736
226 Ga0268266_10374496 3300028379 Bacteria 1342
227 Ga0268265_10429069 3300028380 Bacteria 1229
228 Ga0268264_10033234 3300028381 Bacteria 4236
229 Ga0268264_10102622 3300028381 Bacteria 2489
230 Ga0268264_10406577 3300028381 Bacteria 1309
231 Ga0265319_1070612 3300028563 Bacteria 1120
232 Ga0265338_10213320 3300028800 Bacteria 1447
233 Ga0265338_10232432 3300028800 Bacteria 1370
234 Ga0265760_10015257 3300031090 Bacteria 2202
235 Ga0265325_10003820 3300031241 Bacteria 9701
236 Ga0265325_10065871 3300031241 Bacteria 1828
237 Ga0265316_10041802 3300031344 Bacteria 3666
238 Ga0265316_10086560 3300031344 Bacteria 2395
239 Ga0265316_10195236 3300031344 Bacteria 1502
240 Ga0265316_10278539 3300031344 Bacteria 1222
241 Ga0265314_10004316 3300031711 Bacteria 13266
242 Ga0265342_10046487 3300031712 Bacteria 2609
243 Ga0316578_10161466 3300031728 Bacteria 1351
244 Ga0316212_1001734 3300033547 Bacteria 3013
245 Ga0373956_0007903 3300035119 Bacteria 4293
246 Ga0373957_0098592 3300035120 Bacteria 1168
247 Ga0373955_0256441 3300035172 Unclassified 1049
248 Ga0316574_0024146 3300035398 Bacteria 3636
249 Ga0373931_0197061 3300035691 Bacteria 1201
250 Ga0373935_0179490 3300035692 Bacteria 1453
251 Ga0373927_0004064 3300035695 Bacteria 10326
252 Ga0373927_0036892 3300035695 Bacteria 3178
253 Ga0373933_0000935 3300035724 Bacteria 17819
254 Ga0373937_0000048 3300036401 Bacteria 106296
255 Ga0373925_0073767 3300037068 Bacteria 2583
256 Ga0436364_0860000 3300037853 Bacteria 3209
257 Ga0436364_0925539 3300037853 Bacteria 2859
258 Ga0436364_1295591 3300037853 Bacteria 29481
259 Ga0400489_19377 3300039093 Bacteria 38236
260 Ga0400489_48651 3300039093 Bacteria 1569
261 Ga0436365_0005522 3300039437 Bacteria 2517
262 Ga0436365_0433366 3300039437 Unclassified 909
263 Ga0436365_1198011 3300039437 Bacteria 1339
264 Ga0436365_1553046 3300039437 Bacteria 5087
265 Ga0436361_0630570 3300039447 Bacteria 48113
266 Ga0436363_1584519 3300039450 Bacteria 8411
267 Ga0466963_0163974 3300044694 Bacteria 1548
268 Ga0453684_0715376 3300044712 Bacteria 1087
269 Ga0466958_0086996 3300045836 Bacteria 1929
270 Ga0466958_0178324 3300045836 Bacteria 1348
271 Ga0466967_0489262 3300045976 Bacteria 1206
272 Ga0495629_0006097 3300046459 Bacteria 8958
273 Ga0495629_0291011 3300046459 Bacteria 1120
274 Ga0495651_0022735 3300046462 Bacteria 4874
275 Ga0495653_0245342 3300046463 Unclassified 1191
276 Ga0495580_0002568 3300046472 Bacteria 15791
277 Ga0495580_0080336 3300046472 Bacteria 2273
278 Ga0495580_0123077 3300046472 Bacteria 1800
279 Ga0495580_0202015 3300046472 Bacteria 1369
280 Ga0495580_0234623 3300046472 Bacteria 1259
281 Ga0495582_0000161 3300046473 Bacteria 36312
282 Ga0495582_0060074 3300046473 Bacteria 2097
283 Ga0495639_0007729 3300046475 Bacteria 4623
284 Ga0495664_0013030 3300046477 Bacteria 4714
285 Ga0495594_0019600 3300046499 Bacteria 3596
286 Ga0495666_0014425 3300046526 Bacteria 3934
287 Ga0495652_0044010 3300046529 Bacteria 3846
288 Ga0495665_0207178 3300046531 Bacteria 1015
289 Ga0495640_0012878 3300046533 Bacteria 6378
290 Ga0495586_0037678 3300046535 Bacteria 2596
291 Ga0495587_0000483 3300046536 Bacteria 27675
292 Ga0495645_0006779 3300046543 Bacteria 7959
293 Ga0495622_0072077 3300046557 Bacteria 1594
294 Ga0495634_0074102 3300046642 Bacteria 2237
295 Ga0495635_0182501 3300046663 Bacteria 1426
296 Ga0495623_0006688 3300046679 Bacteria 7502
297 Ga0495647_0002272 3300046681 Bacteria 6030
298 Ga0495613_0095677 3300046689 Bacteria 2148
299 Ga0495613_0187379 3300046689 Unclassified 1463
300 Ga0495600_0328834 3300046809 Bacteria 960
301 Ga0495581_0015401 3300047315 Bacteria 4439
302 Ga0495674_0028168 3300047319 Bacteria 5127
303 Ga0495674_0309617 3300047319 Bacteria 1289
304 Ga0495676_0013739 3300047321 Bacteria 7264
305 Ga0495675_0037144 3300047444 Bacteria 3102
306 Ga0495675_0132544 3300047444 Bacteria 1548
307 Ga0495602_0002854 3300048088 Bacteria 17704
308 Ga0496100_0301584 3300048903 Unclassified 1199
309 Ga0496101_0082773 3300048904 Bacteria 2375
310 Ga0496102_0312884 3300048905 Bacteria 1480
311 Ga0496104_0271494 3300048907 Bacteria 1608
312 Ga0496105_0524091 3300048908 Bacteria 928
313 Ga0496107_0262870 3300048910 Unclassified 1284
314 Ga0496110_0020010 3300048913 Bacteria 5643
315 Ga0496112_0044928 3300048915 Bacteria 4329
316 Ga0496114_0023154 3300048917 Bacteria 5066
317 Ga0496114_0158265 3300048917 Bacteria 1968
318 Ga0496115_0048590 3300048918 Bacteria 3394
319 Ga0501034_0109559 3300049571 Bacteria 2753
320 Ga0501075_0133038 3300049591 Bacteria 1895
321 nmdc:mga0n895_98304_c1 3300050512 Bacteria 2934
322 nmdc:mga0rr50_227732_c1 3300050513 Bacteria 1541
323 nmdc:mga0rr50_959763_c1 3300050513 Bacteria 729
324 nmdc:mga08x19_85925_c1 3300050514 Bacteria 2071
325 Ga0495619_0122423 3300053085 Bacteria 1784
326 Ga0500608_005526 3300053122 Bacteria 5037
327 Ga0070685_10065740
328 Ga0070690_100260786
329 Ga0070666_10005326
330 Ga0070666_10208709
331 Ga0070680_100264026
332 Ga0068868_100246893
333 Ga0068868_100604312
334 Ga0070660_100056998
335 Ga0070661_100118533
336 Ga0070668_100212392
337 Ga0070673_100056102
338 Ga0070659_100049904
339 Ga0070659_100069952
340 Ga0070667_100051283
341 Ga0070667_100184826
342 Ga0070713_100010751
343 Ga0070713_100134567
344 Ga0070711_100072066
345 Ga0070708_100024653
346 Ga0070708_100365928
347 Ga0070678_100084003
348 Ga0070681_10138745
349 Ga0070681_10394623
350 Ga0068867_100464880
351 Ga0070706_100058247
352 Ga0070706_100224931
353 Ga0070707_100017929
354 Ga0070707_100092989
355 Ga0070707_100111196
356 Ga0070707_100141363
357 Ga0070707_100716993
358 Ga0070698_100002236
359 Ga0070698_100049946
360 Ga0070699_100188681
361 Ga0070679_100059838
362 Ga0070697_100001442
363 Ga0068853_100004428
364 Ga0068853_100155367
365 Ga0070672_100306238
366 Ga0070693_100005716
367 Ga0070665_100002167
368 Ga0070665_100382087
369 Ga0068855_100059013
370 Ga0068855_100067901
371 Ga0068855_100152488
372 Ga0068857_100017799
373 Ga0068857_100019435
374 Ga0068854_100487523
375 Ga0068856_100016169
376 Ga0068856_100041717
377 Ga0068856_100076482
378 Ga0068866_10129879
379 Ga0068863_100009928
380 Ga0068863_100098630
381 Ga0068863_100329939
382 Ga0068858_100083758
383 Ga0068860_100077575
384 Ga0068860_100194239
385 Ga0068860_100221729
386 Ga0068860_100435296
387 Ga0070717_10020617
388 Ga0070716_100017050
389 Ga0070716_100018215
390 Ga0070716_100044842
391 Ga0070716_100065314
392 Ga0070712_100102604
393 Ga0070712_100108099
394 Ga0070712_100199026
395 Ga0097621_100001678
396 Ga0097621_100081148
397 Ga0097621_100103333
398 Ga0097621_100234300
399 Ga0097621_100351576
400 Ga0068871_100002610
401 Ga0068871_100075719
402 Ga0068871_100259837
403 Ga0068871_100528467
404 Ga0075433_10503508
405 Ga0075434_100041645
406 Ga0068865_100146869
407 Ga0075436_100032588
408 Ga0075435_100286722
409 Ga0099794_10013542
410 Ga0099794_10036044
411 Ga0099794_10104855
412 Ga0105240_10011779
413 Ga0105240_10371636
414 Ga0105240_10544187
415 Ga0105245_10005083
416 Ga0105245_10019857
417 Ga0105243_10058997
418 Ga0105241_10009852
419 Ga0105241_10092365
420 Ga0105241_10176965
421 Ga0105241_10453704
422 Ga0105242_10085562
423 Ga0105242_10088500
424 Ga0105248_10013796
425 Ga0105248_10015717
426 Ga0105248_10122379
427 Ga0105248_10147267
428 Ga0105248_10171055
429 Ga0105248_10710465
430 Ga0105237_10029368
431 Ga0105237_10155544
432 Ga0105237_10867555
433 Ga0105238_10018855
434 Ga0105238_10020405
435 Ga0105238_10042179
436 Ga0105238_10045188
437 Ga0105238_10630840
438 Ga0105249_10923968
439 Ga0099796_10038550
440 Ga0099796_10053796
441 Ga0105239_10029774
442 Ga0105239_10040089
443 Ga0105239_10046927
444 Ga0105239_10232392
445 Ga0105239_10708644
446 Ga0105239_10745969
447 Ga0105239_11072190
448 Ga0157371_10047055
449 Ga0157370_10302309
450 Ga0157369_10032350
451 Ga0157369_10041589
452 Ga0157369_10441588
453 Ga0157369_10571698
454 Ga0157374_10028009
455 Ga0157374_10089833
456 Ga0157374_10620192
457 Ga0157378_10000230
458 Ga0157378_10001221
459 Ga0157378_10068098
460 Ga0157378_10238513
461 Ga0157378_10363033
462 Ga0163162_10688211
463 Ga0157372_10180123
464 Ga0157372_10596399
465 Ga0157375_10136822
466 Ga0157375_10191902
467 Ga0157375_10407297
468 Ga0163163_10001954
469 Ga0163163_10003683
470 Ga0163163_10063085
471 Ga0163163_10071273
472 Ga0163163_10191764
473 Ga0163163_10294299
474 Ga0157380_10176861
475 Ga0157379_10095563
476 Ga0157379_10196169
477 Ga0157376_10000036
478 Ga0157376_10000174
479 Ga0157376_10388004
480 Ga0213874_10022751
481 Ga0213876_10070203
482 Ga0213876_10227594
483 Ga0213876_10245202
484 Ga0213875_10001387
485 Ga0207642_10111162
486 Ga0207680_10045832
487 Ga0207680_10176538
488 Ga0207684_10112543
489 Ga0207654_10094720
490 Ga0207654_10162958
491 Ga0207654_10271340
492 Ga0207707_10030155
493 Ga0207707_10068805
494 Ga0207707_10123000
495 Ga0207695_10004312
496 Ga0207695_10130795
497 Ga0207695_10132665
498 Ga0207671_10039270
499 Ga0207671_10155954
500 Ga0207693_10071706
501 Ga0207693_10099596
502 Ga0207693_10106507
503 Ga0207663_10097252
504 Ga0207663_10157903
505 Ga0207660_10159405
506 Ga0207657_10186298
507 Ga0207649_10089373
508 Ga0207652_10249223
509 Ga0207646_10000404
510 Ga0207646_10070033
511 Ga0207646_10439421
512 Ga0207646_10579652
513 Ga0207681_10084952
514 Ga0207694_10066946
515 Ga0207694_10366711
516 Ga0207687_10022087
517 Ga0207687_10165930
518 Ga0207700_10008520
519 Ga0207700_10043566
520 Ga0207700_10163256
521 Ga0207686_10004432
522 Ga0207686_10025882
523 Ga0207704_10243931
524 Ga0207665_10006648
525 Ga0207665_10027675
526 Ga0207665_10177985
527 Ga0207691_10302309
528 Ga0207711_10038107
529 Ga0207711_10112999
530 Ga0207711_10357042
531 Ga0207711_10517614
532 Ga0207667_10007686
533 Ga0207667_10044307
534 Ga0207651_10200051
535 Ga0207668_10220381
536 Ga0207658_10195322
537 Ga0207658_10293399
538 Ga0207677_10275463
539 Ga0207703_10153768
540 Ga0207703_10649045
541 Ga0207639_10111091
542 Ga0207639_10512265
543 Ga0207702_10478374
544 Ga0207641_10003159
545 Ga0207641_10090862
546 Ga0207676_10096837
547 Ga0207674_10010926
548 Ga0207674_10040735
549 Ga0209588_1001230
550 Ga0209588_1055088
551 Ga0268266_10000267
552 Ga0268266_10374496
553 Ga0268265_10429069
554 Ga0268264_10033234
555 Ga0268264_10102622
556 Ga0268264_10406577
557 Ga0265319_1070612
558 Ga0265338_10213320
559 Ga0265338_10232432
560 Ga0265760_10015257
561 Ga0265325_10003820
562 Ga0265325_10065871
563 Ga0265316_10041802
564 Ga0265316_10086560
565 Ga0265316_10195236
566 Ga0265316_10278539
567 Ga0265314_10004316
568 Ga0265342_10046487
569 Ga0316578_10161466
570 Ga0316212_1001734
571 Ga0373956_0007903
572 Ga0373957_0098592
573 Ga0373955_0256441
574 Ga0316574_0024146
575 Ga0373931_0197061
576 Ga0373935_0179490
577 Ga0373927_0004064
578 Ga0373927_0036892
579 Ga0373933_0000935
580 Ga0373937_0000048
581 Ga0373925_0073767
582 Ga0436364_0860000
583 Ga0436364_0925539
584 Ga0436364_1295591
585 Ga0400489_19377
586 Ga0400489_48651
587 Ga0436365_0005522
588 Ga0436365_0433366
589 Ga0436365_1198011
590 Ga0436365_1553046
591 Ga0436361_0630570
592 Ga0436363_1584519
593 Ga0466963_0163974
594 Ga0453684_0715376
595 Ga0466958_0086996
596 Ga0466958_0178324
597 Ga0466967_0489262
598 Ga0495629_0006097
599 Ga0495629_0291011
600 Ga0495651_0022735
601 Ga0495653_0245342
602 Ga0495580_0002568
603 Ga0495580_0080336
604 Ga0495580_0123077
605 Ga0495580_0202015
606 Ga0495580_0234623
607 Ga0495582_0000161
608 Ga0495582_0060074
609 Ga0495639_0007729
610 Ga0495664_0013030
611 Ga0495594_0019600
612 Ga0495666_0014425
613 Ga0495652_0044010
614 Ga0495665_0207178
615 Ga0495640_0012878
616 Ga0495586_0037678
617 Ga0495587_0000483
618 Ga0495645_0006779
619 Ga0495622_0072077
620 Ga0495634_0074102
621 Ga0495635_0182501
622 Ga0495623_0006688
623 Ga0495647_0002272
624 Ga0495613_0095677
625 Ga0495613_0187379
626 Ga0495600_0328834
627 Ga0495581_0015401
628 Ga0495674_0028168
629 Ga0495674_0309617
630 Ga0495676_0013739
631 Ga0495675_0037144
632 Ga0495675_0132544
633 Ga0495602_0002854
634 Ga0496100_0301584
635 Ga0496101_0082773
636 Ga0496102_0312884
637 Ga0496104_0271494
638 Ga0496105_0524091
639 Ga0496107_0262870
640 Ga0496110_0020010
641 Ga0496112_0044928
642 Ga0496114_0023154
643 Ga0496114_0158265
644 Ga0496115_0048590
645 Ga0501034_0109559
646 Ga0501075_0133038
647 nmdc:mga0n895_98304_c1
648 nmdc:mga0rr50_227732_c1
649 nmdc:mga0rr50_959763_c1
650 nmdc:mga08x19_85925_c1
651 Ga0495619_0122423
652 Ga0500608_005526

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00121

TIM

Triosephosphate isomerase

16

262

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4y8f-assembly1.cif.gz_A-2 crystal structure of triosephosphate isomerase from clostridium perfringens 0.973 5 250
7rmn-assembly1.cif.gz_B crystal structure of triosephosphate isomerase from verrucomicrobium spinosum 0.9713 4 248
1b9b-assembly1.cif.gz_B triosephosphate isomerase of thermotoga maritima 0.9708 1 247
4y96-assembly1.cif.gz_A crystal structure of triosephosphate isomerase from gemmata obscuriglobus 0.9705 2 248
4y9a-assembly2.cif.gz_C crystal structure of triosephosphate isomerase from streptomyces coelicolor 0.9676 3 248
ID Description Score Start End Superfamily
4y96A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9705 2 248 3.20.20.70
af_P0A858_1_255_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9695 4 248 3.20.20.70
3taoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9663 4 248 3.20.20.70
af_P17751_41_299_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9628 42 249 3.20.20.70
4x22A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9618 3 247 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7C2EAE5-F1-model_v4 Triosephosphate isomerase (EC 5.3.1.1) 0.9851 7 163 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-A0A2V9CT98-F1-model_v4 Triosephosphate isomerase (EC 5.3.1.1) 0.9838 83 250 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-A0A3D2D1T2-F1-model_v4 Triosephosphate isomerase (TIM) (TPI) (EC 5.3.1.1) (Triose-phosphate isomerase) 0.9806 3 250 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-A0A1J5CLY9-F1-model_v4 Triosephosphate isomerase (TIM) (TPI) (EC 5.3.1.1) (Triose-phosphate isomerase) 0.9804 1 250 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-F8L7N4-F1-model_v4 Triosephosphate isomerase (TIM) (TPI) (EC 5.3.1.1) (Triose-phosphate isomerase) 0.9803 1 248 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166

Map