F408001

General Info

Members Datasets Scaffolds Average Seq Length
325 209 302 266

Family's Representative Sequence

Representative Sequence 3300047318|Ga0495636_0008897|Ga0495636_0008897_1283_2140
Length 280
Sequence MRPARLPERVTGEQRFSVMPNSIFNTERIKPGQGKATPNRSLERGIAVLRAFRAGSSMLGNSEIAERTGLSRSTQSLIETGMLEYIPQCRAYRLGVPVLSMAHAMRDSSQVLKVATPMMVEVAMRHKINVGLAVADGDEMVYLESFRYNRRQSLRTVVSGQRIPMALTSLGRAYLATLSPEGFSALMMAMAGKSRSRDWRELRQEIAAAVMSVRQKGYCVASWQPQVVAIATPLRFKGYGVHVLNVSVSTSHDAEAVEAALARPLTELAAAVQERMSLME

Samples

Sample ID Description Type Environment
1 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
2 2643221683 Variovorax sp. Root473 Isolate Unclassified
3 2721755523 Delftia sp. HK171 Isolate Unclassified
4 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
5 2738541277 Variovorax sp. GV051 Isolate Unclassified
6 2738543019 Variovorax sp. GV040 Isolate Unclassified
7 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
8 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
9 2855730933 Achromobacter sp. HZ28 Isolate Nodule
10 2855767633 Achromobacter sp. HZ34 Isolate Nodule
11 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
12 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
13 2901300506 Cupriavidus sp. UYMSc13B Isolate Unclassified
14 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
15 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
16 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
17 2928163908 Burkholderia sp. 567 Isolate Unclassified
18 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
19 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
20 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
21 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
22 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
23 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
24 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
25 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
26 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
27 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
28 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
29 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
30 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
31 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
32 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
33 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
34 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
35 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
36 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
37 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
38 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
39 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
40 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
41 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
42 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
43 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
44 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
45 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
46 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
47 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
48 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
49 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
50 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
51 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
52 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
53 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
54 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
55 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
56 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
57 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
58 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
59 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
60 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
61 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
62 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
63 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
64 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
65 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
66 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
67 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
68 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
69 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
70 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
71 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
72 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
73 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
74 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
75 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
76 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
77 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
78 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
79 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
80 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
81 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
82 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
83 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
84 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
85 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
86 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
87 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
88 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
89 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
90 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
91 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
92 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
93 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
94 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
95 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
96 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
97 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
98 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
99 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
100 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
101 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
102 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
107 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
109 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
111 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
113 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
156 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
157 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
159 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
160 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
161 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
162 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
163 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
164 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
165 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
166 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
167 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
168 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
169 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
170 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
171 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
172 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
173 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
174 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
175 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
176 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
177 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
178 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
179 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
180 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
181 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
182 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
183 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
184 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
185 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
186 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
187 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
188 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
189 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
190 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
191 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
192 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
193 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
194 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
195 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
196 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
197 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
198 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
199 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
200 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
201 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
202 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
203 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
204 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
205 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
206 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
207 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
208 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
209 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.92
Metatranscriptomes 0
Isolates 7.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.31
Nodule 1.23
Rhizoplane 3.69
Rhizosphere 70.46
Stem 0
Stem Tuber 0
Unclassified 8.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10001416 3300003187 Bacteria 16384
2 JGI25151J46595_10002339 3300003187 Bacteria 11537
3 JGI25151J46595_10018995 3300003187 Bacteria 2933
4 JGI25151J46595_10021809 3300003187 Bacteria 2672
5 JGI25153J46596_10002497 3300003215 Bacteria 10565
6 rootL2_10006291 3300003322 Bacteria 3132
7 rootL2_10248358 3300003322 Bacteria 1589
8 Ga0055532_1000301 3300003758 Bacteria 30248
9 Ga0055527_1000279 3300003760 Bacteria 30091
10 Ga0055535_1000589 3300003761 Bacteria 30248
11 Ga0055542_1002069 3300003762 Bacteria 7506
12 Ga0055526_1002749 3300003771 Bacteria 11673
13 Ga0055536_1000033 3300003781 Bacteria 148346
14 Ga0055534_1000167 3300003784 Bacteria 48915
15 Ga0055534_1001238 3300003784 Bacteria 10583
16 Ga0055540_1013383 3300003792 Bacteria 2509
17 Ga0065712_10090372 3300005290 Bacteria 2424
18 Ga0065715_10145608 3300005293 Bacteria 1793
19 Ga0070670_100003048 3300005331 Bacteria 13863
20 Ga0070670_100090202 3300005331 Bacteria 2634
21 Ga0070670_100272667 3300005331 Bacteria 1476
22 Ga0070670_100460576 3300005331 Bacteria 1128
23 Ga0068869_100022551 3300005334 Bacteria 4340
24 Ga0070666_10003311 3300005335 Bacteria 9769
25 Ga0068868_100001412 3300005338 Bacteria 16557
26 Ga0070660_100000261 3300005339 Bacteria 34930
27 Ga0070689_100001774 3300005340 Bacteria 13841
28 Ga0070687_100051129 3300005343 Bacteria 2138
29 Ga0070668_100011481 3300005347 Bacteria 6594
30 Ga0070668_100092439 3300005347 Bacteria 2386
31 Ga0070669_100015988 3300005353 Bacteria 5354
32 Ga0070669_100043471 3300005353 Bacteria 3272
33 Ga0070675_100000275 3300005354 Bacteria 34094
34 Ga0070675_100002346 3300005354 Bacteria 14074
35 Ga0070671_100002917 3300005355 Bacteria 13294
36 Ga0070671_100017230 3300005355 Bacteria 5849
37 Ga0070671_100195795 3300005355 Bacteria 1713
38 Ga0070674_100082459 3300005356 Bacteria 2300
39 Ga0070674_100114229 3300005356 Unclassified 1988
40 Ga0070674_100121163 3300005356 Bacteria 1937
41 Ga0070673_100000664 3300005364 Bacteria 18943
42 Ga0070673_100007986 3300005364 Bacteria 7010
43 Ga0070659_100000108 3300005366 Bacteria 61185
44 Ga0070667_100005279 3300005367 Bacteria 10801
45 Ga0070667_100270744 3300005367 Bacteria 1523
46 Ga0070701_10044753 3300005438 Bacteria 2269
47 Ga0070700_100094816 3300005441 Unclassified 1955
48 Ga0070663_100001967 3300005455 Bacteria 11481
49 Ga0070678_100004353 3300005456 Bacteria 8012
50 Ga0070678_100030210 3300005456 Bacteria 3722
51 Ga0070678_100151144 3300005456 Bacteria 1870
52 Ga0070678_100217702 3300005456 Bacteria 1586
53 Ga0070662_100083075 3300005457 Bacteria 2390
54 Ga0070662_100131015 3300005457 Unclassified 1933
55 Ga0068867_100007457 3300005459 Bacteria 7738
56 Ga0068867_100010608 3300005459 Bacteria 6500
57 Ga0070685_10034370 3300005466 Bacteria 2855
58 Ga0070679_100005441 3300005530 Bacteria 11805
59 Ga0070672_100072314 3300005543 Bacteria 2746
60 Ga0070672_100079679 3300005543 Bacteria 2622
61 Ga0070672_100087093 3300005543 Plasmid 2512
62 Ga0070686_100220629 3300005544 Bacteria 1370
63 Ga0068855_100061274 3300005563 Bacteria 4396
64 Ga0070664_100009192 3300005564 Bacteria 8024
65 Ga0068852_100018500 3300005616 Bacteria 5490
66 Ga0068852_100101866 3300005616 Bacteria 2594
67 Ga0068859_100144908 3300005617 Unclassified 2450
68 Ga0068864_100059002 3300005618 Bacteria 3318
69 Ga0068864_100060683 3300005618 Bacteria 3274
70 Ga0068864_100170581 3300005618 Unclassified 1984
71 Ga0068864_100316491 3300005618 Bacteria 1465
72 Ga0068861_100020940 3300005719 Bacteria 4693
73 Ga0068863_100025652 3300005841 Bacteria 5621
74 Ga0068863_100031947 3300005841 Bacteria 5020
75 Ga0068863_100400574 3300005841 Bacteria 1342
76 Ga0068858_100004721 3300005842 Bacteria 13342
77 Ga0068858_100036092 3300005842 Bacteria 4583
78 Ga0068860_100099257 3300005843 Bacteria 2777
79 Ga0068862_100033322 3300005844 Bacteria 4353
80 Ga0075363_100154722 3300006048 Bacteria 1296
81 Ga0075362_10006241 3300006177 Bacteria 4428
82 Ga0075362_10196586 3300006177 Bacteria 981
83 Ga0075367_10312333 3300006178 Bacteria 990
84 Ga0075366_10036956 3300006195 Bacteria 2881
85 Ga0075366_10039715 3300006195 Bacteria 2781
86 Ga0075366_10236380 3300006195 Bacteria 1114
87 Ga0097621_100029828 3300006237 Bacteria 4311
88 Ga0097621_100264580 3300006237 Bacteria 1509
89 Ga0097621_100308678 3300006237 Bacteria 1399
90 Ga0075370_10015046 3300006353 Bacteria 4135
91 Ga0075370_10088428 3300006353 Bacteria 1786
92 Ga0075370_10157473 3300006353 Bacteria 1332
93 Ga0068871_100011055 3300006358 Bacteria 6617
94 Ga0068871_100262583 3300006358 Bacteria 1506
95 Ga0097620_100144916 3300006931 Unclassified 2450
96 Ga0079104_1000072 3300006946 Bacteria 152567
97 Ga0105250_10007020 3300009092 Bacteria 4865
98 Ga0105250_10010912 3300009092 Bacteria 3778
99 Ga0105240_10153149 3300009093 Bacteria 2744
100 Ga0105240_10183683 3300009093 Bacteria 2466
101 Ga0105245_10040485 3300009098 Bacteria 4152
102 Ga0105245_10415284 3300009098 Unclassified 1347
103 Ga0105243_10004689 3300009148 Bacteria 10761
104 Ga0105243_10011629 3300009148 Bacteria 6657
105 Ga0105242_10033823 3300009176 Bacteria 4096
106 Ga0105242_10061479 3300009176 Bacteria 3089
107 Ga0105248_10095728 3300009177 Bacteria 3343
108 Ga0105248_10173606 3300009177 Bacteria 2429
109 Ga0105238_10100882 3300009551 Bacteria 2869
110 Ga0105249_10030605 3300009553 Bacteria 4866
111 Ga0105239_10031880 3300010375 Bacteria 5791
112 Ga0105246_10317443 3300011119 Unclassified 1265
113 Ga0157373_10132323 3300013100 Bacteria 1754
114 Ga0157369_10114454 3300013105 Bacteria 2864
115 Ga0157374_10056794 3300013296 Bacteria 3655
116 Ga0157374_10217387 3300013296 Unclassified 1875
117 Ga0157374_10289775 3300013296 Bacteria 1618
118 Ga0157378_10064302 3300013297 Bacteria 3281
119 Ga0157378_10064982 3300013297 Bacteria 3265
120 Ga0163162_10051915 3300013306 Bacteria 4116
121 Ga0163162_10069870 3300013306 Bacteria 3564
122 Ga0163162_10132430 3300013306 Bacteria 2602
123 Ga0163162_10171988 3300013306 Bacteria 2291
124 Ga0157375_10127556 3300013308 Bacteria 2661
125 Ga0157375_10132914 3300013308 Bacteria 2609
126 Ga0157375_10155188 3300013308 Bacteria 2427
127 Ga0157375_10184437 3300013308 Bacteria 2239
128 Ga0163163_10004482 3300014325 Bacteria 11914
129 Ga0157380_10009460 3300014326 Bacteria 6982
130 Ga0157380_10098863 3300014326 Bacteria 2425
131 Ga0157377_10086333 3300014745 Bacteria 1844
132 Ga0157379_10005104 3300014968 Bacteria 11260
133 Ga0157379_10032122 3300014968 Bacteria 4678
134 Ga0157376_10049524 3300014969 Bacteria 3480
135 Ga0157376_10055671 3300014969 Bacteria 3301
136 Ga0157376_10068243 3300014969 Bacteria 3010
137 Ga0157376_10330199 3300014969 Bacteria 1453
138 Ga0182007_10000510 3300015262 Bacteria 22940
139 Ga0182005_1027353 3300015265 Bacteria 1555
140 Ga0183362_10010 3300015683 Bacteria 106392
141 Ga0163161_10018252 3300017792 Bacteria 4917
142 Ga0163161_10034452 3300017792 Bacteria 3623
143 Ga0163161_10245878 3300017792 Bacteria 1393
144 Ga0209672_100040 3300025228 Bacteria 278858
145 Ga0209147_100048 3300025229 Bacteria 278858
146 Ga0209258_100070 3300025242 Bacteria 278858
147 Ga0209148_1000461 3300025254 Bacteria 43728
148 Ga0209759_1018302 3300025256 Bacteria 1695
149 Ga0209455_1000525 3300025272 Bacteria 27101
150 Ga0209675_1000108 3300025291 Bacteria 118134
151 Ga0209675_1000213 3300025291 Bacteria 60767
152 Ga0209676_1000144 3300025292 Bacteria 175244
153 Ga0209676_1003967 3300025292 Bacteria 8553
154 Ga0209025_1000003 3300025294 Bacteria 1366495
155 Ga0209025_1000038 3300025294 Bacteria 380508
156 Ga0209025_1000046 3300025294 Bacteria 348962
157 Ga0209025_1000858 3300025294 Bacteria 48043
158 Ga0209025_1012635 3300025294 Bacteria 5392
159 Ga0209564_1000242 3300025295 Bacteria 118134
160 Ga0209564_1024408 3300025295 Bacteria 2067
161 Ga0209758_1000089 3300025297 Bacteria 251523
162 Ga0209051_1000654 3300025303 Bacteria 39187
163 Ga0209257_1002249 3300025304 Bacteria 19795
164 Ga0207697_10017405 3300025315 Bacteria 2954
165 Ga0207697_10021787 3300025315 Bacteria 2625
166 Ga0207696_1005984 3300025711 Bacteria 4966
167 Ga0207682_10001347 3300025893 Bacteria 11324
168 Ga0207688_10062497 3300025901 Bacteria 2099
169 Ga0207680_10001927 3300025903 Bacteria 9733
170 Ga0207645_10016326 3300025907 Bacteria 4916
171 Ga0207645_10018204 3300025907 Bacteria 4627
172 Ga0207695_10032210 3300025913 Bacteria 5739
173 Ga0207671_10027936 3300025914 Bacteria 4217
174 Ga0207671_10045390 3300025914 Bacteria 3250
175 Ga0207662_10013200 3300025918 Bacteria 4617
176 Ga0207657_10000110 3300025919 Bacteria 80294
177 Ga0207657_10211263 3300025919 Unclassified 1557
178 Ga0207652_10033992 3300025921 Bacteria 4295
179 Ga0207681_10004994 3300025923 Bacteria 8150
180 Ga0207681_10047475 3300025923 Bacteria 2893
181 Ga0207681_10055516 3300025923 Bacteria 2698
182 Ga0207694_10021044 3300025924 Bacteria 4938
183 Ga0207650_10001940 3300025925 Bacteria 14570
184 Ga0207650_10160111 3300025925 Bacteria 1783
185 Ga0207659_10000184 3300025926 Bacteria 37154
186 Ga0207659_10001452 3300025926 Bacteria 14157
187 Ga0207687_10227707 3300025927 Unclassified 1471
188 Ga0207687_10490719 3300025927 Unclassified 1024
189 Ga0207644_10044032 3300025931 Bacteria 3169
190 Ga0207644_10063666 3300025931 Bacteria 2678
191 Ga0207690_10000016 3300025932 Bacteria 256657
192 Ga0207706_10007220 3300025933 Bacteria 10272
193 Ga0207686_10039492 3300025934 Bacteria 2864
194 Ga0207709_10000132 3300025935 Bacteria 109578
195 Ga0207709_10135123 3300025935 Unclassified 1687
196 Ga0207670_10009087 3300025936 Bacteria 5646
197 Ga0207669_10040336 3300025937 Bacteria 2707
198 Ga0207669_10062888 3300025937 Bacteria 2288
199 Ga0207691_10001564 3300025940 Bacteria 22724
200 Ga0207691_10067557 3300025940 Bacteria 3232
201 Ga0207691_10068653 3300025940 Bacteria 3202
202 Ga0207691_10145019 3300025940 Bacteria 2090
203 Ga0207711_10004140 3300025941 Bacteria 12423
204 Ga0207689_10014755 3300025942 Bacteria 6634
205 Ga0207667_10068192 3300025949 Bacteria 3704
206 Ga0207667_10115316 3300025949 Bacteria 2769
207 Ga0207651_10001829 3300025960 Bacteria 9916
208 Ga0207651_10008971 3300025960 Bacteria 5435
209 Ga0207668_10015799 3300025972 Bacteria 4698
210 Ga0207668_10106485 3300025972 Bacteria 2095
211 Ga0207668_10227686 3300025972 Bacteria 1501
212 Ga0207658_10004597 3300025986 Bacteria 9580
213 Ga0207658_10229720 3300025986 Unclassified 1565
214 Ga0207658_10279977 3300025986 Bacteria 1429
215 Ga0207677_10017506 3300026023 Bacteria 4275
216 Ga0207677_10051497 3300026023 Bacteria 2792
217 Ga0207677_10504430 3300026023 Bacteria 1047
218 Ga0207703_10003296 3300026035 Bacteria 13545
219 Ga0207703_10097583 3300026035 Unclassified 2483
220 Ga0207678_10005689 3300026067 Bacteria 11133
221 Ga0207678_10473300 3300026067 Bacteria 1090
222 Ga0207708_10009705 3300026075 Bacteria 7142
223 Ga0207641_10005161 3300026088 Bacteria 11166
224 Ga0207641_10026793 3300026088 Bacteria 4758
225 Ga0207641_10117602 3300026088 Bacteria 2367
226 Ga0207648_10012225 3300026089 Bacteria 8039
227 Ga0207648_10020259 3300026089 Bacteria 5993
228 Ga0207676_10002171 3300026095 Bacteria 14150
229 Ga0207676_10006950 3300026095 Bacteria 8020
230 Ga0207676_10172811 3300026095 Unclassified 1884
231 Ga0207674_10036101 3300026116 Bacteria 5155
232 Ga0207675_100001870 3300026118 Bacteria 21043
233 Ga0207683_10053385 3300026121 Bacteria 3543
234 Ga0207683_10147214 3300026121 Bacteria 2124
235 Ga0207698_10017067 3300026142 Bacteria 4916
236 Ga0209281_1000002 3300027111 Bacteria 1924012
237 Ga0268265_10259812 3300028380 Bacteria 1543
238 Ga0268264_10045969 3300028381 Bacteria 3626
239 Ga0307514_10001585 3300031649 Bacteria 26807
240 Ga0307516_10003867 3300031730 Bacteria 18921
241 Ga0373925_0346328 3300037068 Bacteria 1206
242 Ga0395899_0405204 3300037312 Bacteria 901
243 Ga0395900_0094149 3300037418 Bacteria 3077
244 Ga0395898_0256194 3300037466 Bacteria 1669
245 Ga0395898_0574627 3300037466 Bacteria 1069
246 Ga0395905_0000448 3300037471 Bacteria 57693
247 Ga0395905_0025700 3300037471 Bacteria 5551
248 Ga0395905_0031574 3300037471 Bacteria 4986
249 Ga0395905_0622227 3300037471 Bacteria 981
250 Ga0395901_0000105 3300038443 Bacteria 114318
251 Ga0450897_008087 3300042128 Bacteria 972
252 Ga0439446_0032226 3300042156 Bacteria 1519
253 Ga0453684_0377281 3300044712 Bacteria 1593
254 Ga0451576_0039314 3300045051 Bacteria 5006
255 Ga0495629_0081365 3300046459 Bacteria 2261
256 Ga0495642_0074935 3300046528 Bacteria 1419
257 Ga0495642_0099963 3300046528 Bacteria 1234
258 Ga0495642_0119517 3300046528 Bacteria 1130
259 Ga0495621_0014722 3300046539 Bacteria 2481
260 Ga0495597_0000109 3300046542 Bacteria 73193
261 Ga0495588_0054444 3300046674 Bacteria 2064
262 Ga0495599_0248473 3300046678 Bacteria 1083
263 Ga0495658_0153895 3300046683 Bacteria 1414
264 Ga0495624_0256322 3300046690 Bacteria 1058
265 Ga0495636_0008897 3300047318 Bacteria 3954
266 Ga0496102_0385211 3300048905 Bacteria 1319
267 Ga0496104_0044294 3300048907 Bacteria 4181
268 Ga0496104_0052430 3300048907 Bacteria 3853
269 Ga0496105_0011105 3300048908 Bacteria 7103
270 Ga0496106_0046304 3300048909 Bacteria 3269
271 Ga0496106_0284801 3300048909 Bacteria 1324
272 Ga0496106_0344761 3300048909 Bacteria 1196
273 Ga0496108_0597889 3300048911 Bacteria 961
274 Ga0496112_0088636 3300048915 Bacteria 3062
275 Ga0496113_0054271 3300048916 Bacteria 2999
276 Ga0496114_0131545 3300048917 Bacteria 2161
277 Ga0496114_0162764 3300048917 Bacteria 1941
278 Ga0496116_0017810 3300048919 Bacteria 5500
279 Ga0496121_0012269 3300048924 Bacteria 9379
280 Ga0496121_0013916 3300048924 Bacteria 8599
281 Ga0496122_0019033 3300048925 Bacteria 6299
282 Ga0496123_0135160 3300048926 Bacteria 1358
283 Ga0496124_0000007 3300048927 Bacteria 883534
284 Ga0496124_0049702 3300048927 Bacteria 3576
285 Ga0496124_0090541 3300048927 Bacteria 2495
286 Ga0496125_0023320 3300048928 Bacteria 5714
287 Ga0496125_0023709 3300048928 Bacteria 5658
288 Ga0496126_0095538 3300048929 Bacteria 2607
289 Ga0501294_002214 3300049517 Bacteria 1863
290 Ga0501034_0000705 3300049571 Bacteria 50716
291 Ga0501206_003768 3300049653 Bacteria 1926
292 Ga0501044_0200435 3300049823 Bacteria 1954
293 nmdc:mga03683_27948_c1 3300050489 Bacteria 2239
294 nmdc:mga03n38_136505_c1 3300050490 Bacteria 1221
295 nmdc:mga0k408_25298_c1 3300050493 Bacteria 3362
296 nmdc:mga0k408_57157_c1 3300050493 Bacteria 2264
297 nmdc:mga06z11_260683_c1 3300050494 Bacteria 1023
298 nmdc:mga07m45_105379_c1 3300050496 Bacteria 1622
299 nmdc:mga07m45_117768_c1 3300050496 Bacteria 1533
300 nmdc:mga07m45_69520_c1 3300050496 Bacteria 2002
301 Ga0500590_036176 3300053148 Bacteria 2553
302 Ga0500645_004051 3300053730 Bacteria 5748

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046528 Ga0495642_0119517 Ga0495642_0119517_210_1061 225
2 iso_pu_bacteria 2928163908 2928166263 233
3 3300048924 Ga0496121_0013916 Ga0496121_0013916_1435_2232 234
4 3300048927 Ga0496124_0000007 Ga0496124_0000007_102528_103325 234
5 iso_pu_bacteria 2919704043 2919707959 239
6 3300046459 Ga0495629_0081365 Ga0495629_0081365_1151_1927 243
7 3300046674 Ga0495588_0054444 Ga0495588_0054444_786_1562 243
8 iso_pu_bacteria 2857542790 2857543787 243
9 3300037471 Ga0395905_0025700 Ga0395905_0025700_3999_4772 244
10 3300046528 Ga0495642_0099963 Ga0495642_0099963_122_940 245
11 3300048917 Ga0496114_0131545 Ga0496114_0131545_200_1000 245
12 3300037312 Ga0395899_0405204 Ga0395899_0405204_61_837 246
13 3300037466 Ga0395898_0574627 Ga0395898_0574627_46_822 246
14 iso_pu_bacteria 2721755523 2722885506 246
15 iso_pu_bacteria 2839138175 2839142278 246
16 3300003187 JGI25151J46595_10018995 JGI25151J46595_100189952 247
17 3300025294 Ga0209025_1012635 Ga0209025_10126352 247
18 iso_pu_bacteria 2721755763 2723875964 247
19 3300006048 Ga0075363_100154722 Ga0075363_1001547222 248
20 3300006177 Ga0075362_10006241 Ga0075362_100062415 248
21 3300006237 Ga0097621_100308678 Ga0097621_1003086782 248
22 3300013306 Ga0163162_10051915 Ga0163162_100519153 248
23 3300015265 Ga0182005_1027353 Ga0182005_10273532 248
24 3300046528 Ga0495642_0074935 Ga0495642_0074935_187_978 248
25 3300047318 Ga0495636_0008897 Ga0495636_0008897_1283_2140 248
26 3300048905 Ga0496102_0385211 Ga0496102_0385211_262_1053 248
27 3300048907 Ga0496104_0052430 Ga0496104_0052430_1494_2285 248
28 3300048908 Ga0496105_0011105 Ga0496105_0011105_1065_1856 248
29 3300048909 Ga0496106_0284801 Ga0496106_0284801_61_852 248
30 3300048911 Ga0496108_0597889 Ga0496108_0597889_92_883 248
31 3300048917 Ga0496114_0162764 Ga0496114_0162764_387_1178 248
32 3300050489 nmdc:mga03683_27948_c1 nmdc:mga03683_27948_c1_447_1229 248
33 3300050490 nmdc:mga03n38_136505_c1 nmdc:mga03n38_136505_c1_243_1025 248
34 iso_pu_bacteria 2855730933 2855734149 248
35 iso_pu_bacteria 2855767633 2855769739 248
36 iso_pu_bacteria 2901300506 2901308467 248
37 iso_pu_bacteria 2904541872 2904542366 248
38 iso_pu_bacteria 2929160207 2929167640 248
39 3300025294 Ga0209025_1000003 Ga0209025_1000003883 249
40 iso_pu_bacteria 2834641062 2834645862 249
41 iso_pu_bacteria 2928115317 2928119091 249
42 3300006946 Ga0079104_1000072 Ga0079104_1000072118 250
43 3300009092 Ga0105250_10010912 Ga0105250_100109122 250
44 3300009148 Ga0105243_10004689 Ga0105243_100046895 250
45 3300025711 Ga0207696_1005984 Ga0207696_10059844 250
46 3300025935 Ga0207709_10000132 Ga0207709_100001329 250
47 3300027111 Ga0209281_1000002 Ga0209281_10000021007 250
48 3300053148 Ga0500590_036176 Ga0500590_036176_1632_2420 250
49 3300005530 Ga0070679_100005441 Ga0070679_1000054413 251
50 3300005563 Ga0068855_100061274 Ga0068855_1000612743 251
51 3300009093 Ga0105240_10153149 Ga0105240_101531495 251
52 3300025919 Ga0207657_10211263 Ga0207657_102112632 251
53 3300025921 Ga0207652_10033992 Ga0207652_100339924 251
54 3300025949 Ga0207667_10115316 Ga0207667_101153163 251
55 3300037068 Ga0373925_0346328 Ga0373925_0346328_353_1144 251
56 3300037471 Ga0395905_0000448 Ga0395905_0000448_4272_5063 251
57 3300045051 Ga0451576_0039314 Ga0451576_0039314_2687_3478 251
58 3300046683 Ga0495658_0153895 Ga0495658_0153895_104_895 251
59 iso_pu_bacteria 2585428058 2587734055 251
60 iso_pu_bacteria 2643221683 2644464882 251
61 iso_pu_bacteria 2738541277 2738722516 251
62 iso_pu_bacteria 2738543019 2739283087 251
63 3300003187 JGI25151J46595_10002339 JGI25151J46595_100023393 252
64 3300003187 JGI25151J46595_10021809 JGI25151J46595_100218093 252
65 3300025294 Ga0209025_1000038 Ga0209025_1000038279 252
66 3300025294 Ga0209025_1000858 Ga0209025_100085840 252
67 3300042128 Ga0450897_008087 Ga0450897_008087_96_917 252
68 3300042156 Ga0439446_0032226 Ga0439446_0032226_167_988 252
69 3300046542 Ga0495597_0000109 Ga0495597_0000109_70742_71536 252
70 3300048909 Ga0496106_0046304 Ga0496106_0046304_1043_1843 252
71 3300049571 Ga0501034_0000705 Ga0501034_0000705_43765_44568 252
72 3300053730 Ga0500645_004051 Ga0500645_004051_1137_1937 252
73 3300003322 rootL2_10006291 rootL2_100062913 253
74 3300003784 Ga0055534_1000167 Ga0055534_100016722 253
75 3300003792 Ga0055540_1013383 Ga0055540_10133833 253
76 3300005290 Ga0065712_10090372 Ga0065712_100903721 253
77 3300005293 Ga0065715_10145608 Ga0065715_101456082 253
78 3300005331 Ga0070670_100003048 Ga0070670_1000030485 253
79 3300005331 Ga0070670_100090202 Ga0070670_1000902023 253
80 3300005331 Ga0070670_100272667 Ga0070670_1002726672 253
81 3300005331 Ga0070670_100460576 Ga0070670_1004605761 253
82 3300005334 Ga0068869_100022551 Ga0068869_1000225512 253
83 3300005335 Ga0070666_10003311 Ga0070666_100033113 253
84 3300005338 Ga0068868_100001412 Ga0068868_1000014128 253
85 3300005340 Ga0070689_100001774 Ga0070689_1000017747 253
86 3300005343 Ga0070687_100051129 Ga0070687_1000511292 253
87 3300005347 Ga0070668_100011481 Ga0070668_1000114814 253
88 3300005347 Ga0070668_100092439 Ga0070668_1000924392 253
89 3300005353 Ga0070669_100015988 Ga0070669_1000159882 253
90 3300005353 Ga0070669_100043471 Ga0070669_1000434712 253
91 3300005354 Ga0070675_100000275 Ga0070675_1000002754 253
92 3300005354 Ga0070675_100002346 Ga0070675_10000234615 253
93 3300005355 Ga0070671_100002917 Ga0070671_1000029177 253
94 3300005355 Ga0070671_100017230 Ga0070671_1000172304 253
95 3300005355 Ga0070671_100195795 Ga0070671_1001957952 253
96 3300005356 Ga0070674_100114229 Ga0070674_1001142292 253
97 3300005356 Ga0070674_100121163 Ga0070674_1001211632 253
98 3300005364 Ga0070673_100000664 Ga0070673_10000066415 253
99 3300005364 Ga0070673_100007986 Ga0070673_1000079867 253
100 3300005367 Ga0070667_100005279 Ga0070667_1000052792 253
101 3300005367 Ga0070667_100270744 Ga0070667_1002707441 253
102 3300005438 Ga0070701_10044753 Ga0070701_100447531 253
103 3300005441 Ga0070700_100094816 Ga0070700_1000948162 253
104 3300005456 Ga0070678_100004353 Ga0070678_1000043534 253
105 3300005456 Ga0070678_100030210 Ga0070678_1000302103 253
106 3300005456 Ga0070678_100151144 Ga0070678_1001511443 253
107 3300005456 Ga0070678_100217702 Ga0070678_1002177022 253
108 3300005457 Ga0070662_100083075 Ga0070662_1000830751 253
109 3300005457 Ga0070662_100131015 Ga0070662_1001310152 253
110 3300005459 Ga0068867_100007457 Ga0068867_1000074576 253
111 3300005466 Ga0070685_10034370 Ga0070685_100343702 253
112 3300005543 Ga0070672_100072314 Ga0070672_1000723142 253
113 3300005543 Ga0070672_100079679 Ga0070672_1000796793 253
114 3300005543 Ga0070672_100087093 Ga0070672_1000870932 253
115 3300005544 Ga0070686_100220629 Ga0070686_1002206292 253
116 3300005564 Ga0070664_100009192 Ga0070664_1000091924 253
117 3300005616 Ga0068852_100018500 Ga0068852_1000185005 253
118 3300005616 Ga0068852_100101866 Ga0068852_1001018662 253
119 3300005617 Ga0068859_100144908 Ga0068859_1001449082 253
120 3300005618 Ga0068864_100059002 Ga0068864_1000590024 253
121 3300005618 Ga0068864_100060683 Ga0068864_1000606834 253
122 3300005618 Ga0068864_100170581 Ga0068864_1001705812 253
123 3300005618 Ga0068864_100316491 Ga0068864_1003164911 253
124 3300005719 Ga0068861_100020940 Ga0068861_1000209403 253
125 3300005841 Ga0068863_100025652 Ga0068863_1000256523 253
126 3300005841 Ga0068863_100031947 Ga0068863_1000319472 253
127 3300005841 Ga0068863_100400574 Ga0068863_1004005741 253
128 3300005842 Ga0068858_100004721 Ga0068858_1000047212 253
129 3300005842 Ga0068858_100036092 Ga0068858_1000360923 253
130 3300005843 Ga0068860_100099257 Ga0068860_1000992572 253
131 3300005844 Ga0068862_100033322 Ga0068862_1000333221 253
132 3300006177 Ga0075362_10196586 Ga0075362_101965861 253
133 3300006178 Ga0075367_10312333 Ga0075367_103123331 253
134 3300006195 Ga0075366_10039715 Ga0075366_100397151 253
135 3300006195 Ga0075366_10236380 Ga0075366_102363801 253
136 3300006237 Ga0097621_100029828 Ga0097621_1000298284 253
137 3300006237 Ga0097621_100264580 Ga0097621_1002645802 253
138 3300006353 Ga0075370_10015046 Ga0075370_100150461 253
139 3300006353 Ga0075370_10088428 Ga0075370_100884281 253
140 3300006358 Ga0068871_100011055 Ga0068871_1000110555 253
141 3300006358 Ga0068871_100262583 Ga0068871_1002625832 253
142 3300006931 Ga0097620_100144916 Ga0097620_1001449162 253
143 3300009093 Ga0105240_10183683 Ga0105240_101836831 253
144 3300009098 Ga0105245_10040485 Ga0105245_100404852 253
145 3300009098 Ga0105245_10415284 Ga0105245_104152842 253
146 3300009148 Ga0105243_10011629 Ga0105243_100116295 253
147 3300009176 Ga0105242_10033823 Ga0105242_100338232 253
148 3300009176 Ga0105242_10061479 Ga0105242_100614792 253
149 3300009177 Ga0105248_10095728 Ga0105248_100957283 253
150 3300009177 Ga0105248_10173606 Ga0105248_101736062 253
151 3300009553 Ga0105249_10030605 Ga0105249_100306053 253
152 3300011119 Ga0105246_10317443 Ga0105246_103174431 253
153 3300013296 Ga0157374_10056794 Ga0157374_100567944 253
154 3300013296 Ga0157374_10217387 Ga0157374_102173871 253
155 3300013296 Ga0157374_10289775 Ga0157374_102897752 253
156 3300013297 Ga0157378_10064302 Ga0157378_100643022 253
157 3300013297 Ga0157378_10064982 Ga0157378_100649822 253
158 3300013306 Ga0163162_10069870 Ga0163162_100698702 253
159 3300013306 Ga0163162_10132430 Ga0163162_101324302 253
160 3300013306 Ga0163162_10171988 Ga0163162_101719883 253
161 3300013308 Ga0157375_10127556 Ga0157375_101275563 253
162 3300013308 Ga0157375_10132914 Ga0157375_101329142 253
163 3300013308 Ga0157375_10155188 Ga0157375_101551883 253
164 3300013308 Ga0157375_10184437 Ga0157375_101844371 253
165 3300014325 Ga0163163_10004482 Ga0163163_100044827 253
166 3300014326 Ga0157380_10009460 Ga0157380_100094602 253
167 3300014326 Ga0157380_10098863 Ga0157380_100988633 253
168 3300014745 Ga0157377_10086333 Ga0157377_100863331 253
169 3300014968 Ga0157379_10005104 Ga0157379_100051042 253
170 3300014968 Ga0157379_10032122 Ga0157379_100321222 253
171 3300014969 Ga0157376_10049524 Ga0157376_100495243 253
172 3300014969 Ga0157376_10055671 Ga0157376_100556714 253
173 3300014969 Ga0157376_10068243 Ga0157376_100682432 253
174 3300014969 Ga0157376_10330199 Ga0157376_103301992 253
175 3300015683 Ga0183362_10010 Ga0183362_1001094 253
176 3300017792 Ga0163161_10018252 Ga0163161_100182522 253
177 3300017792 Ga0163161_10034452 Ga0163161_100344523 253
178 3300017792 Ga0163161_10245878 Ga0163161_102458782 253
179 3300025291 Ga0209675_1000213 Ga0209675_100021322 253
180 3300025292 Ga0209676_1003967 Ga0209676_10039674 253
181 3300025295 Ga0209564_1024408 Ga0209564_10244084 253
182 3300025303 Ga0209051_1000654 Ga0209051_10006549 253
183 3300025304 Ga0209257_1002249 Ga0209257_100224916 253
184 3300025315 Ga0207697_10017405 Ga0207697_100174052 253
185 3300025315 Ga0207697_10021787 Ga0207697_100217872 253
186 3300025893 Ga0207682_10001347 Ga0207682_100013474 253
187 3300025901 Ga0207688_10062497 Ga0207688_100624972 253
188 3300025903 Ga0207680_10001927 Ga0207680_100019278 253
189 3300025907 Ga0207645_10016326 Ga0207645_100163263 253
190 3300025907 Ga0207645_10018204 Ga0207645_100182044 253
191 3300025914 Ga0207671_10027936 Ga0207671_100279366 253
192 3300025918 Ga0207662_10013200 Ga0207662_100132003 253
193 3300025923 Ga0207681_10004994 Ga0207681_100049941 253
194 3300025923 Ga0207681_10047475 Ga0207681_100474753 253
195 3300025923 Ga0207681_10055516 Ga0207681_100555163 253
196 3300025925 Ga0207650_10001940 Ga0207650_100019409 253
197 3300025925 Ga0207650_10160111 Ga0207650_101601112 253
198 3300025926 Ga0207659_10000184 Ga0207659_1000018433 253
199 3300025926 Ga0207659_10001452 Ga0207659_100014523 253
200 3300025927 Ga0207687_10227707 Ga0207687_102277071 253
201 3300025927 Ga0207687_10490719 Ga0207687_104907192 253
202 3300025931 Ga0207644_10044032 Ga0207644_100440323 253
203 3300025931 Ga0207644_10063666 Ga0207644_100636663 253
204 3300025933 Ga0207706_10007220 Ga0207706_100072202 253
205 3300025934 Ga0207686_10039492 Ga0207686_100394923 253
206 3300025935 Ga0207709_10135123 Ga0207709_101351232 253
207 3300025936 Ga0207670_10009087 Ga0207670_100090876 253
208 3300025937 Ga0207669_10040336 Ga0207669_100403361 253
209 3300025937 Ga0207669_10062888 Ga0207669_100628881 253
210 3300025940 Ga0207691_10001564 Ga0207691_100015645 253
211 3300025940 Ga0207691_10067557 Ga0207691_100675572 253
212 3300025940 Ga0207691_10145019 Ga0207691_101450193 253
213 3300025941 Ga0207711_10004140 Ga0207711_100041407 253
214 3300025942 Ga0207689_10014755 Ga0207689_100147553 253
215 3300025960 Ga0207651_10001829 Ga0207651_100018295 253
216 3300025960 Ga0207651_10008971 Ga0207651_100089713 253
217 3300025972 Ga0207668_10015799 Ga0207668_100157993 253
218 3300025972 Ga0207668_10106485 Ga0207668_101064852 253
219 3300025972 Ga0207668_10227686 Ga0207668_102276861 253
220 3300025986 Ga0207658_10004597 Ga0207658_100045976 253
221 3300025986 Ga0207658_10229720 Ga0207658_102297201 253
222 3300025986 Ga0207658_10279977 Ga0207658_102799772 253
223 3300026023 Ga0207677_10017506 Ga0207677_100175063 253
224 3300026023 Ga0207677_10051497 Ga0207677_100514971 253
225 3300026023 Ga0207677_10504430 Ga0207677_105044301 253
226 3300026035 Ga0207703_10003296 Ga0207703_100032962 253
227 3300026035 Ga0207703_10097583 Ga0207703_100975832 253
228 3300026067 Ga0207678_10473300 Ga0207678_104733001 253
229 3300026075 Ga0207708_10009705 Ga0207708_100097052 253
230 3300026088 Ga0207641_10005161 Ga0207641_100051613 253
231 3300026088 Ga0207641_10026793 Ga0207641_100267933 253
232 3300026088 Ga0207641_10117602 Ga0207641_101176021 253
233 3300026089 Ga0207648_10012225 Ga0207648_100122256 253
234 3300026089 Ga0207648_10020259 Ga0207648_100202593 253
235 3300026095 Ga0207676_10002171 Ga0207676_100021713 253
236 3300026095 Ga0207676_10006950 Ga0207676_100069505 253
237 3300026095 Ga0207676_10172811 Ga0207676_101728112 253
238 3300026116 Ga0207674_10036101 Ga0207674_100361013 253
239 3300026118 Ga0207675_100001870 Ga0207675_1000018703 253
240 3300026121 Ga0207683_10053385 Ga0207683_100533852 253
241 3300026121 Ga0207683_10147214 Ga0207683_101472143 253
242 3300026142 Ga0207698_10017067 Ga0207698_100170676 253
243 3300028380 Ga0268265_10259812 Ga0268265_102598121 253
244 3300028381 Ga0268264_10045969 Ga0268264_100459691 253
245 3300031649 Ga0307514_10001585 Ga0307514_1000158513 253
246 3300031730 Ga0307516_10003867 Ga0307516_1000386713 253
247 3300037418 Ga0395900_0094149 Ga0395900_0094149_1266_2063 253
248 3300037466 Ga0395898_0256194 Ga0395898_0256194_581_1378 253
249 3300037471 Ga0395905_0622227 Ga0395905_0622227_146_943 253
250 3300044712 Ga0453684_0377281 Ga0453684_0377281_701_1525 253
251 3300046690 Ga0495624_0256322 Ga0495624_0256322_221_1021 253
252 3300048909 Ga0496106_0344761 Ga0496106_0344761_387_1184 253
253 3300048927 Ga0496124_0090541 Ga0496124_0090541_516_1313 253
254 3300048928 Ga0496125_0023709 Ga0496125_0023709_2404_3201 253
255 3300048929 Ga0496126_0095538 Ga0496126_0095538_423_1220 253
256 3300049823 Ga0501044_0200435 Ga0501044_0200435_636_1460 253
257 3300050493 nmdc:mga0k408_25298_c1 nmdc:mga0k408_25298_c1_2460_3257 253
258 3300050493 nmdc:mga0k408_57157_c1 nmdc:mga0k408_57157_c1_85_882 253
259 3300050494 nmdc:mga06z11_260683_c1 nmdc:mga06z11_260683_c1_86_910 253
260 3300050496 nmdc:mga07m45_105379_c1 nmdc:mga07m45_105379_c1_749_1546 253
261 3300050496 nmdc:mga07m45_69520_c1 nmdc:mga07m45_69520_c1_951_1748 253
262 iso_pu_bacteria 2858688981 2858696517 253
263 iso_pu_bacteria 2981990288 2981995651 253
264 iso_pu_bacteria 641736154 642414349 253
265 iso_pu_bacteria 8020807995 8020813472 253
266 iso_pu_bacteria 8040173305 8040175309 253
267 3300003758 Ga0055532_1000301 Ga0055532_100030114 254
268 3300003760 Ga0055527_1000279 Ga0055527_100027914 254
269 3300003761 Ga0055535_1000589 Ga0055535_100058914 254
270 3300003762 Ga0055542_1002069 Ga0055542_10020694 254
271 3300005339 Ga0070660_100000261 Ga0070660_10000026115 254
272 3300005356 Ga0070674_100082459 Ga0070674_1000824591 254
273 3300005366 Ga0070659_100000108 Ga0070659_10000010831 254
274 3300005455 Ga0070663_100001967 Ga0070663_1000019677 254
275 3300005459 Ga0068867_100010608 Ga0068867_1000106086 254
276 3300009092 Ga0105250_10007020 Ga0105250_100070203 254
277 3300009551 Ga0105238_10100882 Ga0105238_101008822 254
278 3300010375 Ga0105239_10031880 Ga0105239_100318803 254
279 3300013100 Ga0157373_10132323 Ga0157373_101323232 254
280 3300013105 Ga0157369_10114454 Ga0157369_101144542 254
281 3300015262 Ga0182007_10000510 Ga0182007_1000051018 254
282 3300025228 Ga0209672_100040 Ga0209672_100040142 254
283 3300025229 Ga0209147_100048 Ga0209147_100048142 254
284 3300025242 Ga0209258_100070 Ga0209258_100070142 254
285 3300025254 Ga0209148_1000461 Ga0209148_100046123 254
286 3300025256 Ga0209759_1018302 Ga0209759_10183022 254
287 3300025272 Ga0209455_1000525 Ga0209455_100052516 254
288 3300025913 Ga0207695_10032210 Ga0207695_100322102 254
289 3300025914 Ga0207671_10045390 Ga0207671_100453903 254
290 3300025919 Ga0207657_10000110 Ga0207657_1000011030 254
291 3300025924 Ga0207694_10021044 Ga0207694_100210441 254
292 3300025932 Ga0207690_10000016 Ga0207690_10000016179 254
293 3300025940 Ga0207691_10068653 Ga0207691_100686532 254
294 3300025949 Ga0207667_10068192 Ga0207667_100681921 254
295 3300026067 Ga0207678_10005689 Ga0207678_1000568911 254
296 3300046539 Ga0495621_0014722 Ga0495621_0014722_1110_1916 254
297 3300046678 Ga0495599_0248473 Ga0495599_0248473_123_929 254
298 3300048907 Ga0496104_0044294 Ga0496104_0044294_577_1383 254
299 3300048915 Ga0496112_0088636 Ga0496112_0088636_2135_2941 254
300 3300048916 Ga0496113_0054271 Ga0496113_0054271_1874_2680 254
301 3300048919 Ga0496116_0017810 Ga0496116_0017810_3422_4228 254
302 3300048924 Ga0496121_0012269 Ga0496121_0012269_6561_7367 254
303 3300048925 Ga0496122_0019033 Ga0496122_0019033_4753_5559 254
304 3300048926 Ga0496123_0135160 Ga0496123_0135160_203_1009 254
305 3300048927 Ga0496124_0049702 Ga0496124_0049702_1163_1969 254
306 3300048928 Ga0496125_0023320 Ga0496125_0023320_1648_2454 254
307 3300049517 Ga0501294_002214 Ga0501294_002214_29_829 254
308 3300049653 Ga0501206_003768 Ga0501206_003768_549_1349 254
309 iso_pu_bacteria 8055225921 8055226001 254
310 3300003215 JGI25153J46596_10002497 JGI25153J46596_100024972 255
311 3300006195 Ga0075366_10036956 Ga0075366_100369564 255
312 3300006353 Ga0075370_10157473 Ga0075370_101574731 255
313 3300025297 Ga0209758_1000089 Ga0209758_1000089135 255
314 3300037471 Ga0395905_0031574 Ga0395905_0031574_452_1258 255
315 3300050496 nmdc:mga07m45_117768_c1 nmdc:mga07m45_117768_c1_83_889 255
316 3300038443 Ga0395901_0000105 Ga0395901_0000105_32166_33023 256
317 3300003187 JGI25151J46595_10001416 JGI25151J46595_1000141612 257
318 3300003322 rootL2_10248358 rootL2_102483582 257
319 3300003771 Ga0055526_1002749 Ga0055526_100274912 257
320 3300003781 Ga0055536_1000033 Ga0055536_100003372 257
321 3300003784 Ga0055534_1001238 Ga0055534_10012388 257
322 3300025291 Ga0209675_1000108 Ga0209675_100010846 257
323 3300025292 Ga0209676_1000144 Ga0209676_100014490 257
324 3300025294 Ga0209025_1000046 Ga0209025_1000046260 257
325 3300025295 Ga0209564_1000242 Ga0209564_100024259 257

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09339

HTH_IclR

IclR helix-turn-helix domain

41

87

0.9

PF01614

IclR

Bacterial transcriptional regulator

103

274

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wcg-assembly1.cif.gz_B the binding mode of cyprinid herpesvirus3 orf112-zalpha to z-dna 0.9098 24 80
4wcg-assembly1.cif.gz_A the binding mode of cyprinid herpesvirus3 orf112-zalpha to z-dna 0.9019 24 80
4kmf-assembly1.cif.gz_A-2 crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna 0.8948 20 80
4lb5-assembly1.cif.gz_A-2 crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.8915 26 80
3f23-assembly1.cif.gz_A crystal structure of zalpha in complex with d(cggccg) 0.8779 22 81
ID Description Score Start End Superfamily
2ia2C01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9674 21 80 1.10.10.10
2ia2D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9614 21 80 1.10.10.10
2g7uD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9497 21 80 1.10.10.10
2g7uC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.942 21 87 1.10.10.10
3r4kD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9331 22 81 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7W6SPN5-F1-model_v4 DNA-binding IclR family transcriptional regulator 0.9165 51 251 GO:0003677
GO:0003700
GO:0045892
AF-A0A259LD52-F1-model_v4 IclR family transcriptional regulator 0.9142 13 91 GO:0003677
GO:0003700
GO:0045892
AF-A0A520G0B4-F1-model_v4 IclR family transcriptional regulator 0.9092 14 249 GO:0003677
GO:0003700
GO:0045892
AF-A0A661J4Q8-F1-model_v4 HTH iclR-type domain-containing protein 0.8997 13 91 GO:0003677
GO:0003700
GO:0045892
AF-A0A3D2GRX1-F1-model_v4 IclR family transcriptional regulator 0.8954 14 93 GO:0003677
GO:0003700
GO:0045892

Feature Viewer

pLDDT pTM Quality
85.84 0.79 High
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Predicted Structure (AlphaFold2)

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