F407918

General Info

Members Datasets Scaffolds Average Seq Length
325 182 650 333

Family's Representative Sequence

Representative Sequence 3300035725|Ga0373947_0105043|Ga0373947_0105043_92_1228
Length 378
Sequence MRIAIGFPRRLPLRRIVAPCCAAAYATHSAIEDSKMTDATGNDRIRMTVAEARALGEAAMRGAGYDNDDARILTDHVLDAALCGYEYSGLPKLLNVVDYPDFRQPRRPVTVVRETAATAVLDGGNTTGMVAAYRAAEATIARAEANGLAIVCLANTWMTGRSAYYCEMIARAGLVVIHTVAAPPAVAPFGGMRPALGTNPIAFGFPTDGDPLVIDMGTSAFMGTDLQFRARLGTPIPDGVALGPNGLPTTDAAIARQGALLPFGGPEGGYKGFGLALAMDALGALTAGTRSATSVSGYLFMAFKPDLFVPADEYRREVSRRIDMIKATQRQIGVEEIRIPGERGYATRARLMRAGIEIDAQIYQALRRLAEGNLDHRG

Samples

Sample ID Description Type Environment
1 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
120 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
121 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
122 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
123 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
124 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
125 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
126 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
127 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
128 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
129 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
130 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
131 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
132 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
133 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
134 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
135 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
136 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
137 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
138 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
139 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
140 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
141 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
142 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
143 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
144 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
145 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
146 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
147 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
148 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
149 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
150 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
151 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
152 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
153 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
154 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
173 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
176 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.23
Nodule 0
Rhizoplane 1.85
Rhizosphere 95.38
Stem 0
Stem Tuber 0
Unclassified 9.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373947_0105043 3300035725 Bacteria 1779
2 JGI24739J22299_10001528 3300001989 Bacteria 8739
3 JGI24737J22298_10004144 3300001990 Bacteria 5068
4 JGI25406J46586_10008684 3300003203 Unclassified 4583
5 Ga0070676_10089898 3300005328 Bacteria 1879
6 Ga0070677_10021807 3300005333 Bacteria 2353
7 Ga0068869_100222911 3300005334 Bacteria 1495
8 Ga0070680_100033977 3300005336 Bacteria 4113
9 Ga0068868_100003814 3300005338 Bacteria 10524
10 Ga0070691_10146919 3300005341 Bacteria 1206
11 Ga0070692_10030975 3300005345 Bacteria 2678
12 Ga0070668_100004870 3300005347 Bacteria 9948
13 Ga0070675_100006441 3300005354 Bacteria 9009
14 Ga0070675_100048798 3300005354 Bacteria 3472
15 Ga0070671_100067900 3300005355 Bacteria 2973
16 Ga0070688_100071138 3300005365 Bacteria 2226
17 Ga0070713_100045591 3300005436 Bacteria 3594
18 Ga0070701_10046182 3300005438 Unclassified 2238
19 Ga0070705_100002051 3300005440 Bacteria 10290
20 Ga0070694_100041558 3300005444 Bacteria 3068
21 Ga0070694_100079835 3300005444 Bacteria 2272
22 Ga0070708_100011808 3300005445 Bacteria 7108
23 Ga0070708_100026342 3300005445 Bacteria 4975
24 Ga0070708_100049816 3300005445 Unclassified 3707
25 Ga0070708_100097236 3300005445 Bacteria 2691
26 Ga0070678_100001857 3300005456 Bacteria 11387
27 Ga0070662_100124732 3300005457 Unclassified 1978
28 Ga0070681_10146483 3300005458 Bacteria 2290
29 Ga0070681_10178260 3300005458 Unclassified 2047
30 Ga0068867_100004810 3300005459 Bacteria 9507
31 Ga0070706_100171275 3300005467 Bacteria 2027
32 Ga0070706_100314727 3300005467 Unclassified 1460
33 Ga0070707_100038572 3300005468 Bacteria 4563
34 Ga0070707_100162981 3300005468 Unclassified 2172
35 Ga0070707_100254602 3300005468 Bacteria 1708
36 Ga0070707_100336167 3300005468 Bacteria 1467
37 Ga0070698_100199237 3300005471 Bacteria 1938
38 Ga0070698_100258877 3300005471 Bacteria 1672
39 Ga0070699_100012203 3300005518 Bacteria 7414
40 Ga0070697_100011641 3300005536 Bacteria 6875
41 Ga0070697_100060543 3300005536 Bacteria 3086
42 Ga0070697_100137659 3300005536 Bacteria 2051
43 Ga0068853_100008642 3300005539 Bacteria 8189
44 Ga0068853_100305721 3300005539 Bacteria 1471
45 Ga0070672_100005287 3300005543 Bacteria 8542
46 Ga0070672_100016577 3300005543 Bacteria 5278
47 Ga0070695_100066469 3300005545 Bacteria 2350
48 Ga0070695_100109549 3300005545 Bacteria 1872
49 Ga0070696_100013297 3300005546 Bacteria 5522
50 Ga0070696_100321652 3300005546 Bacteria 1191
51 Ga0070665_100037101 3300005548 Bacteria 4902
52 Ga0070704_100164027 3300005549 Unclassified 1760
53 Ga0070704_100230014 3300005549 Bacteria 1512
54 Ga0070704_100266385 3300005549 Bacteria 1413
55 Ga0070704_100339290 3300005549 Bacteria 1265
56 Ga0068857_100041263 3300005577 Bacteria 4092
57 Ga0068857_100060174 3300005577 Bacteria 3374
58 Ga0068857_100196576 3300005577 Unclassified 1838
59 Ga0068854_100006398 3300005578 Bacteria 7492
60 Ga0068854_100006402 3300005578 Bacteria 7490
61 Ga0068854_100309269 3300005578 Bacteria 1281
62 Ga0068856_100000985 3300005614 Bacteria 30399
63 Ga0068856_100076929 3300005614 Bacteria 3306
64 Ga0070702_100045084 3300005615 Bacteria 2492
65 Ga0068852_100291860 3300005616 Unclassified 1576
66 Ga0068852_100291954 3300005616 Unclassified 1575
67 Ga0068859_100035363 3300005617 Bacteria 5012
68 Ga0068859_100418682 3300005617 Bacteria 1436
69 Ga0068864_100037440 3300005618 Bacteria 4140
70 Ga0068861_100104911 3300005719 Bacteria 2256
71 Ga0068851_10006903 3300005834 Bacteria 5203
72 Ga0068851_10007422 3300005834 Bacteria 5034
73 Ga0068851_10026177 3300005834 Plasmid 2864
74 Ga0068863_100033034 3300005841 Bacteria 4929
75 Ga0068860_100433251 3300005843 Bacteria 1305
76 Ga0068862_100021889 3300005844 Bacteria 5346
77 Ga0081539_10000271 3300005985 Bacteria 118902
78 Ga0075366_10009304 3300006195 Bacteria 5486
79 Ga0097621_100001699 3300006237 Bacteria 15057
80 Ga0075370_10006398 3300006353 Bacteria 5919
81 Ga0068871_100042669 3300006358 Unclassified 3643
82 Ga0068871_100231607 3300006358 Bacteria 1603
83 Ga0075428_100003078 3300006844 Bacteria 18193
84 Ga0075428_100031753 3300006844 Bacteria 5834
85 Ga0075428_100087842 3300006844 Bacteria 3391
86 Ga0075430_100000600 3300006846 Bacteria 27436
87 Ga0075431_100000054 3300006847 Bacteria 62862
88 Ga0075431_100033064 3300006847 Bacteria 5330
89 Ga0075431_100040202 3300006847 Bacteria 4819
90 Ga0075431_100067162 3300006847 Bacteria 3702
91 Ga0075431_100104683 3300006847 Bacteria 2920
92 Ga0075433_10003397 3300006852 Bacteria 12299
93 Ga0075433_10004993 3300006852 Bacteria 10391
94 Ga0075433_10039596 3300006852 Bacteria 4076
95 Ga0075433_10059396 3300006852 Bacteria 3346
96 Ga0075433_10077120 3300006852 Bacteria 2935
97 Ga0075433_10249725 3300006852 Bacteria 1574
98 Ga0075434_100003604 3300006871 Bacteria 13824
99 Ga0075434_100030309 3300006871 Bacteria 5326
100 Ga0075434_100031508 3300006871 Bacteria 5228
101 Ga0075434_100085603 3300006871 Bacteria 3152
102 Ga0075434_100095140 3300006871 Bacteria 2984
103 Ga0075434_100298828 3300006871 Bacteria 1630
104 Ga0075434_100484785 3300006871 Bacteria 1257
105 Ga0075429_100002691 3300006880 Bacteria 14967
106 Ga0075429_100025067 3300006880 Bacteria 5177
107 Ga0075429_100034004 3300006880 Bacteria 4429
108 Ga0075429_100040155 3300006880 Unclassified 4073
109 Ga0075429_100040996 3300006880 Bacteria 4032
110 Ga0075429_100115505 3300006880 Bacteria 2346
111 Ga0075429_100132355 3300006880 Bacteria 2182
112 Ga0075436_100021544 3300006914 Bacteria 4424
113 Ga0075436_100035428 3300006914 Bacteria 3444
114 Ga0097620_100035365 3300006931 Bacteria 5012
115 Ga0097620_100418666 3300006931 Bacteria 1436
116 Ga0075435_100005858 3300007076 Bacteria 8646
117 Ga0075435_100008206 3300007076 Bacteria 7481
118 Ga0075435_100176991 3300007076 Bacteria 1802
119 Ga0111539_10139705 3300009094 Bacteria 2836
120 Ga0111539_10180788 3300009094 Bacteria 2463
121 Ga0111539_10203030 3300009094 Bacteria 2311
122 Ga0111539_10296490 3300009094 Bacteria 1882
123 Ga0111539_10373357 3300009094 Unclassified 1660
124 Ga0111539_10563530 3300009094 Bacteria 1327
125 Ga0114129_10000383 3300009147 Bacteria 51440
126 Ga0114129_10010996 3300009147 Bacteria 12895
127 Ga0114129_10020358 3300009147 Bacteria 9438
128 Ga0114129_10025300 3300009147 Bacteria 8410
129 Ga0114129_10069011 3300009147 Bacteria 4927
130 Ga0114129_10195716 3300009147 Bacteria 2742
131 Ga0114129_10223991 3300009147 Bacteria 2536
132 Ga0114129_10259722 3300009147 Bacteria 2329
133 Ga0114129_10319785 3300009147 Bacteria 2063
134 Ga0114129_10416574 3300009147 Bacteria 1768
135 Ga0114129_10529131 3300009147 Bacteria 1536
136 Ga0105241_10002070 3300009174 Bacteria 15157
137 Ga0105241_10239434 3300009174 Bacteria 1533
138 Ga0105248_10259932 3300009177 Bacteria 1954
139 Ga0105237_10022220 3300009545 Bacteria 6510
140 Ga0105237_10221604 3300009545 Unclassified 1891
141 Ga0105238_10006040 3300009551 Bacteria 12007
142 Ga0105238_10008387 3300009551 Bacteria 10338
143 Ga0105238_10222508 3300009551 Bacteria 1864
144 Ga0105249_10261487 3300009553 Unclassified 1720
145 Ga0157378_10120347 3300013297 Bacteria 2419
146 Ga0163162_10122104 3300013306 Bacteria 2710
147 Ga0157375_10026104 3300013308 Bacteria 5439
148 Ga0157375_10386165 3300013308 Bacteria 1567
149 Ga0163163_10026074 3300014325 Bacteria 5581
150 Ga0157380_10381263 3300014326 Bacteria 1331
151 Ga0157377_10023387 3300014745 Bacteria 3274
152 Ga0157379_10195536 3300014968 Unclassified 1828
153 Ga0157376_10015557 3300014969 Bacteria 5751
154 Ga0163161_10061148 3300017792 Unclassified 2742
155 Ga0207697_10005412 3300025315 Bacteria 5935
156 Ga0207682_10010092 3300025893 Bacteria 3708
157 Ga0207642_10020646 3300025899 Bacteria 2576
158 Ga0207688_10156555 3300025901 Unclassified 1348
159 Ga0207647_10001579 3300025904 Bacteria 17484
160 Ga0207645_10019568 3300025907 Bacteria 4437
161 Ga0207643_10019520 3300025908 Bacteria 3715
162 Ga0207684_10032669 3300025910 Bacteria 4425
163 Ga0207684_10097212 3300025910 Bacteria 2514
164 Ga0207684_10168014 3300025910 Unclassified 1890
165 Ga0207684_10246585 3300025910 Bacteria 1541
166 Ga0207654_10153692 3300025911 Bacteria 1479
167 Ga0207707_10093909 3300025912 Bacteria 2621
168 Ga0207695_10000506 3300025913 Bacteria 82904
169 Ga0207695_10131616 3300025913 Bacteria 2459
170 Ga0207662_10018246 3300025918 Bacteria 3977
171 Ga0207649_10014958 3300025920 Unclassified 4355
172 Ga0207652_10227449 3300025921 Bacteria 1681
173 Ga0207646_10008134 3300025922 Bacteria 10557
174 Ga0207646_10012746 3300025922 Bacteria 8062
175 Ga0207646_10207145 3300025922 Bacteria 1771
176 Ga0207681_10190395 3300025923 Bacteria 1569
177 Ga0207694_10000086 3300025924 Bacteria 108152
178 Ga0207650_10011686 3300025925 Bacteria 6049
179 Ga0207659_10034851 3300025926 Bacteria 3475
180 Ga0207706_10016230 3300025933 Bacteria 6729
181 Ga0207709_10018667 3300025935 Bacteria 3888
182 Ga0207670_10139165 3300025936 Bacteria 1788
183 Ga0207691_10005585 3300025940 Bacteria 12151
184 Ga0207691_10008220 3300025940 Bacteria 10023
185 Ga0207691_10186920 3300025940 Bacteria 1808
186 Ga0207679_10050911 3300025945 Unclassified 3029
187 Ga0207667_10045109 3300025949 Bacteria 4669
188 Ga0207712_10024334 3300025961 Bacteria 4008
189 Ga0207712_10042585 3300025961 Bacteria 3128
190 Ga0207640_10040149 3300025981 Bacteria 2966
191 Ga0207639_10006878 3300026041 Bacteria 7747
192 Ga0207639_10030245 3300026041 Bacteria 3971
193 Ga0207678_10246504 3300026067 Bacteria 1530
194 Ga0207708_10016190 3300026075 Bacteria 5603
195 Ga0207702_10000098 3300026078 Bacteria 101326
196 Ga0207702_10000101 3300026078 Bacteria 99845
197 Ga0207702_10016051 3300026078 Bacteria 6201
198 Ga0207641_10028217 3300026088 Bacteria 4636
199 Ga0207648_10010836 3300026089 Bacteria 8615
200 Ga0207648_10078717 3300026089 Bacteria 2876
201 Ga0207648_10117323 3300026089 Bacteria 2339
202 Ga0207676_10005962 3300026095 Bacteria 8593
203 Ga0207674_10227797 3300026116 Unclassified 1812
204 Ga0207674_10413615 3300026116 Bacteria 1303
205 Ga0207675_100024301 3300026118 Bacteria 5635
206 Ga0207683_10001658 3300026121 Bacteria 19925
207 Ga0207698_10022356 3300026142 Unclassified 4392
208 Ga0207428_10015759 3300027907 Bacteria 6526
209 Ga0207428_10020841 3300027907 Bacteria 5559
210 Ga0268266_10021467 3300028379 Bacteria 5500
211 Ga0268265_10251511 3300028380 Bacteria 1565
212 Ga0265330_10012888 3300031235 Bacteria 3903
213 Ga0265332_10001236 3300031238 Bacteria 14779
214 Ga0265328_10007459 3300031239 Bacteria 4556
215 Ga0265329_10027536 3300031242 Bacteria 1867
216 Ga0265331_10002054 3300031250 Bacteria 13947
217 Ga0265327_10072351 3300031251 Bacteria 1722
218 Ga0265316_10021575 3300031344 Bacteria 5450
219 Ga0265314_10000887 3300031711 Bacteria 35662
220 Ga0265342_10035113 3300031712 Bacteria 3071
221 Ga0307405_10025606 3300031731 Bacteria 3390
222 Ga0307413_10042654 3300031824 Bacteria 2668
223 Ga0307410_10417009 3300031852 Bacteria 1088
224 Ga0307412_10356477 3300031911 Bacteria 1176
225 Ga0307416_100002218 3300032002 Bacteria 11057
226 Ga0307411_10189790 3300032005 Bacteria 1568
227 Ga0307415_100034212 3300032126 Bacteria 3306
228 Ga0307415_100159012 3300032126 Bacteria 1749
229 Ga0373940_0010019 3300035088 Bacteria 2218
230 Ga0373941_0042987 3300035115 Bacteria 1405
231 Ga0373931_0001388 3300035691 Bacteria 10362
232 Ga0373931_0180869 3300035691 Bacteria 1248
233 Ga0373933_0127136 3300035724 Bacteria 1600
234 Ga0373937_0006255 3300036401 Bacteria 10271
235 Ga0373925_0028458 3300037068 Bacteria 4094
236 Ga0395900_0004115 3300037418 Bacteria 15497
237 Ga0436363_1252785 3300039450 Bacteria 10627
238 Ga0451807_1273817 3300041486 Unclassified 1834
239 Ga0451577_0068151 3300042876 Bacteria 3174
240 Ga0451577_0090311 3300042876 Bacteria 2734
241 Ga0451576_0019454 3300045051 Bacteria 7410
242 Ga0451576_0094415 3300045051 Bacteria 3111
243 Ga0451576_0127424 3300045051 Bacteria 2652
244 Ga0495592_0242820 3300046454 Bacteria 1194
245 Ga0495651_0018431 3300046462 Bacteria 5407
246 Ga0495653_0108778 3300046463 Bacteria 1996
247 Ga0495580_0002233 3300046472 Bacteria 16919
248 Ga0495628_0010212 3300046516 Bacteria 7987
249 Ga0495630_0100078 3300046517 Bacteria 2193
250 Ga0495667_0079173 3300046559 Bacteria 2137
251 Ga0495635_0182503 3300046663 Bacteria 1426
252 Ga0495680_0024208 3300047322 Bacteria 5038
253 Ga0495675_0063882 3300047444 Bacteria 2329
254 Ga0496102_0088859 3300048905 Bacteria 2857
255 Ga0496102_0751862 3300048905 Unclassified 898
256 Ga0496104_0156768 3300048907 Unclassified 2185
257 Ga0496107_0082694 3300048910 Bacteria 2342
258 Ga0496108_0010690 3300048911 Bacteria 7447
259 Ga0496119_0013451 3300048922 Bacteria 6518
260 Ga0496120_0031877 3300048923 Unclassified 3185
261 Ga0496121_0124561 3300048924 Unclassified 1940
262 Ga0496126_0105758 3300048929 Unclassified 2457
263 Ga0501040_0001115 3300049576 Bacteria 17004
264 Ga0501042_0117030 3300049578 Bacteria 1919
265 Ga0501043_0001139 3300049579 Bacteria 23367
266 Ga0501046_0001700 3300049580 Bacteria 21021
267 Ga0501046_0293450 3300049580 Bacteria 1189
268 Ga0501047_0001678 3300049581 Bacteria 21548
269 Ga0501048_0000876 3300049582 Bacteria 22226
270 Ga0501075_0025843 3300049591 Bacteria 4316
271 Ga0501075_0227462 3300049591 Bacteria 1422
272 Ga0501045_0000637 3300049824 Bacteria 22180
273 nmdc:mga0k408_35079_c1 3300050493 Bacteria 2875
274 nmdc:mga07m45_4009_c1 3300050496 Bacteria 7168
275 nmdc:mga05p37_10648_c1 3300050507 Bacteria 10911
276 nmdc:mga05p37_107367_c1 3300050507 Bacteria 3434
277 nmdc:mga05p37_10895_c1 3300050507 Bacteria 10797
278 nmdc:mga05p37_141_c1 3300050507 Bacteria 67555
279 nmdc:mga05p37_22383_c1 3300050507 Bacteria 7666
280 nmdc:mga05p37_22867_c1 3300050507 Bacteria 7582
281 nmdc:mga05p37_2577_c1 3300050507 Bacteria 21075
282 nmdc:mga05p37_468704_c1 3300050507 Bacteria 1454
283 nmdc:mga05p37_56763_c1 3300050507 Bacteria 4821
284 nmdc:mga05p37_656176_c1 3300050507 Unclassified 1174
285 nmdc:mga05p37_81396_c1 3300050507 Bacteria 3989
286 nmdc:mga09592_12116_c1 3300050508 Bacteria 7019
287 nmdc:mga09592_129949_c1 3300050508 Bacteria 2167
288 nmdc:mga09592_16469_c1 3300050508 Bacteria 6048
289 nmdc:mga09592_19004_c1 3300050508 Bacteria 5639
290 nmdc:mga09592_20998_c1 3300050508 Bacteria 5377
291 nmdc:mga09592_210144_c1 3300050508 Bacteria 1686
292 nmdc:mga09592_24477_c1 3300050508 Bacteria 4994
293 nmdc:mga09592_8850_c1 3300050508 Bacteria 8189
294 nmdc:mga0qj67_508_c1 3300050509 Bacteria 26601
295 nmdc:mga06r32_32284_c1 3300050510 Bacteria 4925
296 nmdc:mga06r32_382803_c1 3300050510 Unclassified 1389
297 nmdc:mga06r32_5075_c1 3300050510 Bacteria 11855
298 nmdc:mga06r32_5311_c1 3300050510 Bacteria 11597
299 nmdc:mga06r32_9567_c1 3300050510 Bacteria 8754
300 nmdc:mga08y16_17721_c1 3300050511 Bacteria 7500
301 nmdc:mga08y16_205163_c1 3300050511 Bacteria 2042
302 nmdc:mga08y16_240872_c1 3300050511 Bacteria 1870
303 nmdc:mga08y16_41884_c1 3300050511 Bacteria 4796
304 nmdc:mga0n895_109831_c1 3300050512 Bacteria 2773
305 nmdc:mga0n895_131911_c1 3300050512 Bacteria 2524
306 nmdc:mga0n895_15602_c1 3300050512 Bacteria 6935
307 nmdc:mga0n895_30919_c1 3300050512 Bacteria 5121
308 nmdc:mga0n895_4294_c1 3300050512 Bacteria 11668
309 nmdc:mga0n895_6564_c1 3300050512 Bacteria 9903
310 nmdc:mga0rr50_116075_c1 3300050513 Bacteria 2125
311 nmdc:mga0rr50_301384_c1 3300050513 Bacteria 1341
312 nmdc:mga0rr50_99526_c1 3300050513 Bacteria 2281
313 nmdc:mga0rr50_99871_c1 3300050513 Bacteria 2278
314 nmdc:mga08x19_126553_c1 3300050514 Bacteria 1716
315 nmdc:mga08x19_22575_c1 3300050514 Bacteria 3898
316 nmdc:mga08x19_24642_c1 3300050514 Bacteria 3742
317 nmdc:mga08x19_367_c1 3300050514 Bacteria 31883
318 nmdc:mga0a205_117732_c1 3300050515 Bacteria 2555
319 nmdc:mga0a205_134126_c1 3300050515 Bacteria 2377
320 nmdc:mga0a205_16321_c1 3300050515 Bacteria 6954
321 nmdc:mga0a205_27310_c1 3300050515 Bacteria 5451
322 nmdc:mga0a205_283246_c1 3300050515 Bacteria 1533
323 nmdc:mga0a205_63220_c1 3300050515 Bacteria 3576
324 nmdc:mga0a205_64818_c2 3300050515 Bacteria 3002
325 nmdc:mga0a205_87102_c1 3300050515 Bacteria 3017
326 Ga0373947_0105043
327 JGI24739J22299_10001528
328 JGI24737J22298_10004144
329 JGI25406J46586_10008684
330 Ga0070676_10089898
331 Ga0070677_10021807
332 Ga0068869_100222911
333 Ga0070680_100033977
334 Ga0068868_100003814
335 Ga0070691_10146919
336 Ga0070692_10030975
337 Ga0070668_100004870
338 Ga0070675_100006441
339 Ga0070675_100048798
340 Ga0070671_100067900
341 Ga0070688_100071138
342 Ga0070713_100045591
343 Ga0070701_10046182
344 Ga0070705_100002051
345 Ga0070694_100041558
346 Ga0070694_100079835
347 Ga0070708_100011808
348 Ga0070708_100026342
349 Ga0070708_100049816
350 Ga0070708_100097236
351 Ga0070678_100001857
352 Ga0070662_100124732
353 Ga0070681_10146483
354 Ga0070681_10178260
355 Ga0068867_100004810
356 Ga0070706_100171275
357 Ga0070706_100314727
358 Ga0070707_100038572
359 Ga0070707_100162981
360 Ga0070707_100254602
361 Ga0070707_100336167
362 Ga0070698_100199237
363 Ga0070698_100258877
364 Ga0070699_100012203
365 Ga0070697_100011641
366 Ga0070697_100060543
367 Ga0070697_100137659
368 Ga0068853_100008642
369 Ga0068853_100305721
370 Ga0070672_100005287
371 Ga0070672_100016577
372 Ga0070695_100066469
373 Ga0070695_100109549
374 Ga0070696_100013297
375 Ga0070696_100321652
376 Ga0070665_100037101
377 Ga0070704_100164027
378 Ga0070704_100230014
379 Ga0070704_100266385
380 Ga0070704_100339290
381 Ga0068857_100041263
382 Ga0068857_100060174
383 Ga0068857_100196576
384 Ga0068854_100006398
385 Ga0068854_100006402
386 Ga0068854_100309269
387 Ga0068856_100000985
388 Ga0068856_100076929
389 Ga0070702_100045084
390 Ga0068852_100291860
391 Ga0068852_100291954
392 Ga0068859_100035363
393 Ga0068859_100418682
394 Ga0068864_100037440
395 Ga0068861_100104911
396 Ga0068851_10006903
397 Ga0068851_10007422
398 Ga0068851_10026177
399 Ga0068863_100033034
400 Ga0068860_100433251
401 Ga0068862_100021889
402 Ga0081539_10000271
403 Ga0075366_10009304
404 Ga0097621_100001699
405 Ga0075370_10006398
406 Ga0068871_100042669
407 Ga0068871_100231607
408 Ga0075428_100003078
409 Ga0075428_100031753
410 Ga0075428_100087842
411 Ga0075430_100000600
412 Ga0075431_100000054
413 Ga0075431_100033064
414 Ga0075431_100040202
415 Ga0075431_100067162
416 Ga0075431_100104683
417 Ga0075433_10003397
418 Ga0075433_10004993
419 Ga0075433_10039596
420 Ga0075433_10059396
421 Ga0075433_10077120
422 Ga0075433_10249725
423 Ga0075434_100003604
424 Ga0075434_100030309
425 Ga0075434_100031508
426 Ga0075434_100085603
427 Ga0075434_100095140
428 Ga0075434_100298828
429 Ga0075434_100484785
430 Ga0075429_100002691
431 Ga0075429_100025067
432 Ga0075429_100034004
433 Ga0075429_100040155
434 Ga0075429_100040996
435 Ga0075429_100115505
436 Ga0075429_100132355
437 Ga0075436_100021544
438 Ga0075436_100035428
439 Ga0097620_100035365
440 Ga0097620_100418666
441 Ga0075435_100005858
442 Ga0075435_100008206
443 Ga0075435_100176991
444 Ga0111539_10139705
445 Ga0111539_10180788
446 Ga0111539_10203030
447 Ga0111539_10296490
448 Ga0111539_10373357
449 Ga0111539_10563530
450 Ga0114129_10000383
451 Ga0114129_10010996
452 Ga0114129_10020358
453 Ga0114129_10025300
454 Ga0114129_10069011
455 Ga0114129_10195716
456 Ga0114129_10223991
457 Ga0114129_10259722
458 Ga0114129_10319785
459 Ga0114129_10416574
460 Ga0114129_10529131
461 Ga0105241_10002070
462 Ga0105241_10239434
463 Ga0105248_10259932
464 Ga0105237_10022220
465 Ga0105237_10221604
466 Ga0105238_10006040
467 Ga0105238_10008387
468 Ga0105238_10222508
469 Ga0105249_10261487
470 Ga0157378_10120347
471 Ga0163162_10122104
472 Ga0157375_10026104
473 Ga0157375_10386165
474 Ga0163163_10026074
475 Ga0157380_10381263
476 Ga0157377_10023387
477 Ga0157379_10195536
478 Ga0157376_10015557
479 Ga0163161_10061148
480 Ga0207697_10005412
481 Ga0207682_10010092
482 Ga0207642_10020646
483 Ga0207688_10156555
484 Ga0207647_10001579
485 Ga0207645_10019568
486 Ga0207643_10019520
487 Ga0207684_10032669
488 Ga0207684_10097212
489 Ga0207684_10168014
490 Ga0207684_10246585
491 Ga0207654_10153692
492 Ga0207707_10093909
493 Ga0207695_10000506
494 Ga0207695_10131616
495 Ga0207662_10018246
496 Ga0207649_10014958
497 Ga0207652_10227449
498 Ga0207646_10008134
499 Ga0207646_10012746
500 Ga0207646_10207145
501 Ga0207681_10190395
502 Ga0207694_10000086
503 Ga0207650_10011686
504 Ga0207659_10034851
505 Ga0207706_10016230
506 Ga0207709_10018667
507 Ga0207670_10139165
508 Ga0207691_10005585
509 Ga0207691_10008220
510 Ga0207691_10186920
511 Ga0207679_10050911
512 Ga0207667_10045109
513 Ga0207712_10024334
514 Ga0207712_10042585
515 Ga0207640_10040149
516 Ga0207639_10006878
517 Ga0207639_10030245
518 Ga0207678_10246504
519 Ga0207708_10016190
520 Ga0207702_10000098
521 Ga0207702_10000101
522 Ga0207702_10016051
523 Ga0207641_10028217
524 Ga0207648_10010836
525 Ga0207648_10078717
526 Ga0207648_10117323
527 Ga0207676_10005962
528 Ga0207674_10227797
529 Ga0207674_10413615
530 Ga0207675_100024301
531 Ga0207683_10001658
532 Ga0207698_10022356
533 Ga0207428_10015759
534 Ga0207428_10020841
535 Ga0268266_10021467
536 Ga0268265_10251511
537 Ga0265330_10012888
538 Ga0265332_10001236
539 Ga0265328_10007459
540 Ga0265329_10027536
541 Ga0265331_10002054
542 Ga0265327_10072351
543 Ga0265316_10021575
544 Ga0265314_10000887
545 Ga0265342_10035113
546 Ga0307405_10025606
547 Ga0307413_10042654
548 Ga0307410_10417009
549 Ga0307412_10356477
550 Ga0307416_100002218
551 Ga0307411_10189790
552 Ga0307415_100034212
553 Ga0307415_100159012
554 Ga0373940_0010019
555 Ga0373941_0042987
556 Ga0373931_0001388
557 Ga0373931_0180869
558 Ga0373933_0127136
559 Ga0373937_0006255
560 Ga0373925_0028458
561 Ga0395900_0004115
562 Ga0436363_1252785
563 Ga0451807_1273817
564 Ga0451577_0068151
565 Ga0451577_0090311
566 Ga0451576_0019454
567 Ga0451576_0094415
568 Ga0451576_0127424
569 Ga0495592_0242820
570 Ga0495651_0018431
571 Ga0495653_0108778
572 Ga0495580_0002233
573 Ga0495628_0010212
574 Ga0495630_0100078
575 Ga0495667_0079173
576 Ga0495635_0182503
577 Ga0495680_0024208
578 Ga0495675_0063882
579 Ga0496102_0088859
580 Ga0496102_0751862
581 Ga0496104_0156768
582 Ga0496107_0082694
583 Ga0496108_0010690
584 Ga0496119_0013451
585 Ga0496120_0031877
586 Ga0496121_0124561
587 Ga0496126_0105758
588 Ga0501040_0001115
589 Ga0501042_0117030
590 Ga0501043_0001139
591 Ga0501046_0001700
592 Ga0501046_0293450
593 Ga0501047_0001678
594 Ga0501048_0000876
595 Ga0501075_0025843
596 Ga0501075_0227462
597 Ga0501045_0000637
598 nmdc:mga0k408_35079_c1
599 nmdc:mga07m45_4009_c1
600 nmdc:mga05p37_10648_c1
601 nmdc:mga05p37_107367_c1
602 nmdc:mga05p37_10895_c1
603 nmdc:mga05p37_141_c1
604 nmdc:mga05p37_22383_c1
605 nmdc:mga05p37_22867_c1
606 nmdc:mga05p37_2577_c1
607 nmdc:mga05p37_468704_c1
608 nmdc:mga05p37_56763_c1
609 nmdc:mga05p37_656176_c1
610 nmdc:mga05p37_81396_c1
611 nmdc:mga09592_12116_c1
612 nmdc:mga09592_129949_c1
613 nmdc:mga09592_16469_c1
614 nmdc:mga09592_19004_c1
615 nmdc:mga09592_20998_c1
616 nmdc:mga09592_210144_c1
617 nmdc:mga09592_24477_c1
618 nmdc:mga09592_8850_c1
619 nmdc:mga0qj67_508_c1
620 nmdc:mga06r32_32284_c1
621 nmdc:mga06r32_382803_c1
622 nmdc:mga06r32_5075_c1
623 nmdc:mga06r32_5311_c1
624 nmdc:mga06r32_9567_c1
625 nmdc:mga08y16_17721_c1
626 nmdc:mga08y16_205163_c1
627 nmdc:mga08y16_240872_c1
628 nmdc:mga08y16_41884_c1
629 nmdc:mga0n895_109831_c1
630 nmdc:mga0n895_131911_c1
631 nmdc:mga0n895_15602_c1
632 nmdc:mga0n895_30919_c1
633 nmdc:mga0n895_4294_c1
634 nmdc:mga0n895_6564_c1
635 nmdc:mga0rr50_116075_c1
636 nmdc:mga0rr50_301384_c1
637 nmdc:mga0rr50_99526_c1
638 nmdc:mga0rr50_99871_c1
639 nmdc:mga08x19_126553_c1
640 nmdc:mga08x19_22575_c1
641 nmdc:mga08x19_24642_c1
642 nmdc:mga08x19_367_c1
643 nmdc:mga0a205_117732_c1
644 nmdc:mga0a205_134126_c1
645 nmdc:mga0a205_16321_c1
646 nmdc:mga0a205_27310_c1
647 nmdc:mga0a205_283246_c1
648 nmdc:mga0a205_63220_c1
649 nmdc:mga0a205_64818_c2
650 nmdc:mga0a205_87102_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02615

Ldh_2

Malate/L-lactate dehydrogenase

47

367

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1z2i-assembly1.cif.gz_B crystal structure of agrobacterium tumefaciens malate dehydrogenase, new york structural genomics consortium 0.8997 9 335
2x06-assembly3.cif.gz_D sulfolactate dehydrogenase from methanocaldococcus jannaschii 0.8968 9 333
1x0a-assembly1.cif.gz_A crystal structure of type ii malate/lactate dehydrogenase from thermus thermophilus hb8 0.8921 9 337
4h8a-assembly1.cif.gz_A crystal structure of ureidoglycolate dehydrogenase in binary complex with nadh 0.8917 9 333
1xrh-assembly3.cif.gz_E crystal structure of ureidoglycolate dehydrogenase from escherichia coli 0.8863 9 333
ID Description Score Start End Superfamily
af_P77555_4_66_1.10.1530.10 Mainly Alpha;Orthogonal Bundle;Hypothetical Oxidoreductase Yiak; Chain: A, domain 1;Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.9588 12 57 1.10.1530.10
af_Q9VP68_93_150_1.10.1530.10 Mainly Alpha;Orthogonal Bundle;Hypothetical Oxidoreductase Yiak; Chain: A, domain 1;Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.9531 11 57 1.10.1530.10
3i0pA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain 0.9347 74 303 3.30.1370.60
1xrhB01 Mainly Alpha;Orthogonal Bundle;Hypothetical Oxidoreductase Yiak; Chain: A, domain 1;Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.9344 9 59 1.10.1530.10
1wtjA03 Alpha Beta;2-Layer Sandwich;Wheat Germ Agglutinin (Isolectin 2); domain 1;Hypothetical oxidoreductase yiak; domain 3 0.9301 182 229 3.30.60.50
ID Description Score Start End GO Terms
AF-A0A2V6VXD8-F1-model_v4 Ldh family oxidoreductase 0.9686 134 337 GO:0016491
AF-A0A7Y2EEH8-F1-model_v4 Ldh family oxidoreductase 0.9555 4 249 GO:0016491
AF-A0A3N5NAC3-F1-model_v4 Ldh family oxidoreductase 0.9536 1 333 GO:0016491
AF-W7ZGM1-F1-model_v4 deleted 0.9532 9 197
AF-A0A537QJE9-F1-model_v4 Ldh family oxidoreductase 0.9503 2 293 GO:0016491

Map