F407895

General Info

Members Datasets Scaffolds Average Seq Length
325 175 650 477

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10008794|Ga0307405_100087942
Length 524
Sequence MKLIECVPNFSEGRRPEVVGAIRDAIAAVEGVTILDASSDESHNRSVITFVVPADHAVQAAFEGIRAAAERIDLRQHTGEHPRIGAADVVPFVPLEDATMDDCIALAKALGERVGKELEIPVYLYERAATRPTRKNLADVRRGQFEGLRDELGTNPEREPDFGPNAIHQSAGAVAIGARPFLVAYNVYLGDAANLPLAKSIAKQVRESSGGFKAVKGLGLEVDGQAQVSMNLVDTDETTLHTVFDFIAAKAKDEEVDVTWSEIIGLVPERVLFDAARDHLKLRAFTPDQVLERQVARAMRASNEVSSSDASPHTAQSTATTAGEFLQAIASSDPVPGGGSVSAYAGALSSALIRMVAGLTIGRKKYASVESEMAVVAANAEHLAESLSKLVERDADAYAAVSAAFKLPKDPADAVAARKDAITKALLGAAEVPLETARLCAQAAELAASVAVKGNSNAITDAGVAALLASAGCKGAAYNVRINIASLEDRSLGSHLEEEAINLVAQAERHSSEACAAVERALSS

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
112 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
115 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
118 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
119 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
122 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
123 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
124 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
131 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
132 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
133 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
134 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
135 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
136 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
137 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
138 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
139 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
140 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
141 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
142 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
145 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
148 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
149 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
150 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
163 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
174 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.54
Rhizosphere 98.15
Stem 0
Stem Tuber 0
Unclassified 5.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10008794 3300031731 Bacteria 5141
2 rootL2_10037423 3300003322 Bacteria 2827
3 Ga0070658_10010785 3300005327 Bacteria 7325
4 Ga0070658_10018188 3300005327 Bacteria 5622
5 Ga0070676_10017827 3300005328 Bacteria 3931
6 Ga0070683_100002048 3300005329 Bacteria 15883
7 Ga0070683_100009944 3300005329 Bacteria 8157
8 Ga0070683_100016229 3300005329 Bacteria 6561
9 Ga0070683_100026714 3300005329 Bacteria 5202
10 Ga0070683_100048817 3300005329 Bacteria 3913
11 Ga0070683_100050496 3300005329 Bacteria 3851
12 Ga0070683_100161127 3300005329 Bacteria 2128
13 Ga0070690_100096942 3300005330 Unclassified 1950
14 Ga0070670_100103658 3300005331 Unclassified 2450
15 Ga0068869_100005328 3300005334 Bacteria 8084
16 Ga0070680_100000903 3300005336 Bacteria 21012
17 Ga0070680_100000910 3300005336 Bacteria 20950
18 Ga0070680_100026378 3300005336 Bacteria 4648
19 Ga0070680_100074573 3300005336 Bacteria 2792
20 Ga0070682_100006282 3300005337 Bacteria 6663
21 Ga0070682_100030031 3300005337 Bacteria 3277
22 Ga0070682_100074391 3300005337 Bacteria 2182
23 Ga0068868_100003226 3300005338 Bacteria 11343
24 Ga0068868_100011249 3300005338 Bacteria 6517
25 Ga0070660_100007573 3300005339 Bacteria 7567
26 Ga0070689_100008048 3300005340 Bacteria 7402
27 Ga0070689_100018146 3300005340 Bacteria 5179
28 Ga0070691_10014532 3300005341 Bacteria 3613
29 Ga0070661_100075503 3300005344 Bacteria 2483
30 Ga0070661_100105797 3300005344 Bacteria 2098
31 Ga0070675_100015173 3300005354 Bacteria 6084
32 Ga0070671_100016464 3300005355 Bacteria 5978
33 Ga0070674_100017655 3300005356 Bacteria 4496
34 Ga0070673_100012181 3300005364 Bacteria 5895
35 Ga0070659_100065888 3300005366 Bacteria 2869
36 Ga0070709_10013283 3300005434 Bacteria 4624
37 Ga0070714_100006676 3300005435 Bacteria 8932
38 Ga0070694_100034178 3300005444 Bacteria 3351
39 Ga0070708_100000468 3300005445 Bacteria 30422
40 Ga0070708_100146524 3300005445 Bacteria 2193
41 Ga0070681_10001365 3300005458 Bacteria 21346
42 Ga0070681_10006930 3300005458 Bacteria 11030
43 Ga0070681_10021946 3300005458 Bacteria 6405
44 Ga0070681_10035580 3300005458 Bacteria 5003
45 Ga0070681_10109537 3300005458 Bacteria 2702
46 Ga0070681_10230218 3300005458 Bacteria 1768
47 Ga0068867_100006612 3300005459 Bacteria 8196
48 Ga0068867_100017613 3300005459 Bacteria 5073
49 Ga0070706_100125282 3300005467 Bacteria 2395
50 Ga0070706_100177916 3300005467 Bacteria 1986
51 Ga0070698_100001191 3300005471 Bacteria 28850
52 Ga0070698_100005143 3300005471 Bacteria 14306
53 Ga0070698_100018137 3300005471 Bacteria 7408
54 Ga0070698_100058133 3300005471 Bacteria 3911
55 Ga0070699_100023161 3300005518 Bacteria 5350
56 Ga0070699_100069959 3300005518 Bacteria 3050
57 Ga0070699_100070812 3300005518 Bacteria 3032
58 Ga0070699_100196910 3300005518 Bacteria 1791
59 Ga0070679_100003962 3300005530 Bacteria 13637
60 Ga0070679_100012695 3300005530 Bacteria 8057
61 Ga0070679_100014567 3300005530 Bacteria 7555
62 Ga0070679_100020406 3300005530 Bacteria 6461
63 Ga0070679_100028374 3300005530 Bacteria 5517
64 Ga0070684_100000670 3300005535 Bacteria 23692
65 Ga0070684_100009149 3300005535 Bacteria 7788
66 Ga0070684_100011077 3300005535 Bacteria 7174
67 Ga0070684_100012872 3300005535 Bacteria 6723
68 Ga0070684_100017983 3300005535 Bacteria 5812
69 Ga0070684_100034208 3300005535 Unclassified 4344
70 Ga0070684_100066204 3300005535 Bacteria 3172
71 Ga0070684_100068297 3300005535 Bacteria 3124
72 Ga0068853_100052253 3300005539 Bacteria 3520
73 Ga0068853_100124961 3300005539 Bacteria 2297
74 Ga0070672_100032721 3300005543 Bacteria 3928
75 Ga0070672_100040003 3300005543 Bacteria 3595
76 Ga0070695_100000708 3300005545 Bacteria 17797
77 Ga0070695_100018470 3300005545 Bacteria 4235
78 Ga0070696_100007194 3300005546 Bacteria 7433
79 Ga0070693_100000799 3300005547 Bacteria 13905
80 Ga0070693_100011748 3300005547 Unclassified 4415
81 Ga0068855_100002422 3300005563 Bacteria 23029
82 Ga0068855_100003298 3300005563 Bacteria 19759
83 Ga0068855_100012716 3300005563 Bacteria 10152
84 Ga0068855_100068268 3300005563 Bacteria 4139
85 Ga0068855_100200963 3300005563 Bacteria 2243
86 Ga0070664_100050952 3300005564 Bacteria 3505
87 Ga0070664_100067946 3300005564 Bacteria 3046
88 Ga0070664_100177076 3300005564 Bacteria 1894
89 Ga0068856_100012754 3300005614 Bacteria 8136
90 Ga0068856_100015322 3300005614 Bacteria 7409
91 Ga0068856_100017754 3300005614 Bacteria 6899
92 Ga0070702_100004416 3300005615 Bacteria 6422
93 Ga0068852_100007922 3300005616 Bacteria 7783
94 Ga0068852_100015246 3300005616 Bacteria 5952
95 Ga0068852_100018645 3300005616 Bacteria 5470
96 Ga0068852_100024710 3300005616 Bacteria 4860
97 Ga0068859_100024269 3300005617 Bacteria 6084
98 Ga0068866_10009315 3300005718 Bacteria 4165
99 Ga0068863_100007230 3300005841 Bacteria 10887
100 Ga0068858_100053381 3300005842 Unclassified 3739
101 Ga0097621_100047253 3300006237 Unclassified 3487
102 Ga0068871_100039390 3300006358 Bacteria 3781
103 Ga0075428_100234524 3300006844 Bacteria 1980
104 Ga0075431_100007230 3300006847 Bacteria 11046
105 Ga0075431_100306934 3300006847 Unclassified 1602
106 Ga0068865_100044583 3300006881 Bacteria 3036
107 Ga0075436_100004633 3300006914 Bacteria 9421
108 Ga0097620_100024268 3300006931 Bacteria 6084
109 Ga0105240_10004336 3300009093 Bacteria 21654
110 Ga0105240_10020939 3300009093 Bacteria 8706
111 Ga0105240_10145070 3300009093 Bacteria 2834
112 Ga0105245_10012762 3300009098 Bacteria 7317
113 Ga0105245_10068395 3300009098 Bacteria 3218
114 Ga0105241_10000065 3300009174 Bacteria 80067
115 Ga0105241_10018230 3300009174 Bacteria 5161
116 Ga0105242_10038978 3300009176 Bacteria 3823
117 Ga0105248_10004453 3300009177 Bacteria 15504
118 Ga0105237_10125372 3300009545 Bacteria 2562
119 Ga0105238_10016123 3300009551 Bacteria 7558
120 Ga0105239_10014020 3300010375 Bacteria 8898
121 Ga0105246_10010272 3300011119 Bacteria 5784
122 Ga0157373_10002361 3300013100 Bacteria 14326
123 Ga0157373_10021866 3300013100 Bacteria 4641
124 Ga0157373_10037840 3300013100 Unclassified 3457
125 Ga0157371_10010010 3300013102 Bacteria 7418
126 Ga0157370_10006871 3300013104 Bacteria 12461
127 Ga0157370_10023825 3300013104 Bacteria 6073
128 Ga0157370_10027142 3300013104 Bacteria 5647
129 Ga0157370_10096064 3300013104 Bacteria 2780
130 Ga0157369_10015172 3300013105 Bacteria 8697
131 Ga0157369_10049398 3300013105 Bacteria 4560
132 Ga0157369_10240672 3300013105 Bacteria 1890
133 Ga0157374_10006317 3300013296 Bacteria 10045
134 Ga0157374_10193690 3300013296 Unclassified 1989
135 Ga0157378_10041013 3300013297 Bacteria 4106
136 Ga0157372_10010254 3300013307 Bacteria 9952
137 Ga0157372_10013668 3300013307 Bacteria 8675
138 Ga0157372_10015127 3300013307 Bacteria 8258
139 Ga0157372_10019940 3300013307 Bacteria 7228
140 Ga0157372_10027609 3300013307 Bacteria 6185
141 Ga0157372_10031146 3300013307 Bacteria 5839
142 Ga0157372_10052666 3300013307 Bacteria 4533
143 Ga0157372_10144122 3300013307 Bacteria 2747
144 Ga0157372_10212285 3300013307 Unclassified 2243
145 Ga0157375_10088553 3300013308 Bacteria 3151
146 Ga0157375_10211291 3300013308 Bacteria 2098
147 Ga0163163_10043623 3300014325 Bacteria 4397
148 Ga0157379_10038871 3300014968 Bacteria 4245
149 Ga0163161_10028541 3300017792 Bacteria 3964
150 Ga0207642_10007618 3300025899 Bacteria 3665
151 Ga0207699_10040908 3300025906 Bacteria 2673
152 Ga0207705_10066792 3300025909 Bacteria 2602
153 Ga0207705_10105691 3300025909 Bacteria 2075
154 Ga0207684_10108170 3300025910 Bacteria 2379
155 Ga0207654_10000265 3300025911 Bacteria 31886
156 Ga0207707_10002248 3300025912 Bacteria 17457
157 Ga0207707_10007042 3300025912 Bacteria 9805
158 Ga0207707_10013238 3300025912 Bacteria 7186
159 Ga0207707_10015088 3300025912 Bacteria 6727
160 Ga0207707_10018584 3300025912 Bacteria 6059
161 Ga0207707_10026436 3300025912 Bacteria 5073
162 Ga0207707_10134402 3300025912 Bacteria 2163
163 Ga0207707_10191428 3300025912 Bacteria 1784
164 Ga0207695_10003314 3300025913 Bacteria 22831
165 Ga0207695_10014039 3300025913 Bacteria 9513
166 Ga0207695_10014812 3300025913 Bacteria 9211
167 Ga0207660_10003035 3300025917 Bacteria 10985
168 Ga0207660_10011335 3300025917 Bacteria 5799
169 Ga0207660_10029006 3300025917 Bacteria 3791
170 Ga0207660_10037563 3300025917 Bacteria 3376
171 Ga0207660_10098986 3300025917 Bacteria 2175
172 Ga0207657_10012032 3300025919 Bacteria 8558
173 Ga0207657_10039652 3300025919 Bacteria 4183
174 Ga0207649_10005304 3300025920 Bacteria 6976
175 Ga0207649_10006062 3300025920 Bacteria 6562
176 Ga0207649_10093511 3300025920 Bacteria 1973
177 Ga0207652_10001170 3300025921 Bacteria 23580
178 Ga0207652_10002941 3300025921 Bacteria 14248
179 Ga0207652_10010765 3300025921 Bacteria 7366
180 Ga0207652_10022351 3300025921 Bacteria 5231
181 Ga0207652_10041271 3300025921 Bacteria 3922
182 Ga0207652_10046096 3300025921 Bacteria 3718
183 Ga0207652_10069192 3300025921 Bacteria 3064
184 Ga0207681_10023319 3300025923 Bacteria 3957
185 Ga0207694_10025881 3300025924 Bacteria 4461
186 Ga0207659_10004072 3300025926 Bacteria 8820
187 Ga0207664_10019901 3300025929 Bacteria 4968
188 Ga0207690_10025830 3300025932 Unclassified 3692
189 Ga0207706_10003360 3300025933 Bacteria 15307
190 Ga0207706_10004677 3300025933 Bacteria 12830
191 Ga0207686_10008927 3300025934 Bacteria 5425
192 Ga0207704_10010131 3300025938 Bacteria 4579
193 Ga0207691_10011708 3300025940 Bacteria 8423
194 Ga0207711_10038932 3300025941 Bacteria 4043
195 Ga0207689_10005834 3300025942 Bacteria 10918
196 Ga0207661_10004391 3300025944 Bacteria 9888
197 Ga0207661_10008564 3300025944 Bacteria 7311
198 Ga0207661_10017981 3300025944 Bacteria 5246
199 Ga0207661_10063384 3300025944 Bacteria 2994
200 Ga0207661_10116751 3300025944 Bacteria 2266
201 Ga0207679_10001593 3300025945 Bacteria 14168
202 Ga0207679_10009511 3300025945 Bacteria 6232
203 Ga0207679_10050985 3300025945 Unclassified 3027
204 Ga0207679_10061090 3300025945 Bacteria 2804
205 Ga0207667_10026166 3300025949 Bacteria 6378
206 Ga0207667_10027043 3300025949 Bacteria 6255
207 Ga0207667_10241455 3300025949 Bacteria 1848
208 Ga0207658_10013188 3300025986 Bacteria 5644
209 Ga0207658_10106701 3300025986 Bacteria 2206
210 Ga0207677_10009123 3300026023 Bacteria 5569
211 Ga0207639_10028710 3300026041 Bacteria 4064
212 Ga0207639_10114378 3300026041 Bacteria 2205
213 Ga0207708_10013302 3300026075 Bacteria 6146
214 Ga0207702_10004313 3300026078 Bacteria 12682
215 Ga0207702_10199011 3300026078 Bacteria 1856
216 Ga0207648_10007893 3300026089 Bacteria 10383
217 Ga0207648_10036938 3300026089 Bacteria 4303
218 Ga0207648_10124185 3300026089 Bacteria 2270
219 Ga0207676_10169780 3300026095 Bacteria 1899
220 Ga0207674_10000356 3300026116 Bacteria 59208
221 Ga0207674_10008361 3300026116 Bacteria 11971
222 Ga0207698_10032864 3300026142 Bacteria 3764
223 Ga0207698_10038310 3300026142 Bacteria 3541
224 Ga0207698_10241176 3300026142 Bacteria 1648
225 Ga0209968_1003198 3300027526 Unclassified 2457
226 Ga0209966_1003769 3300027695 Unclassified 2559
227 Ga0209998_10000440 3300027717 Bacteria 11584
228 Ga0307408_100061797 3300031548 Bacteria 2735
229 Ga0307408_100079712 3300031548 Bacteria 2444
230 Ga0307405_10002834 3300031731 Bacteria 7788
231 Ga0307405_10008975 3300031731 Bacteria 5103
232 Ga0307405_10057292 3300031731 Bacteria 2447
233 Ga0307413_10001847 3300031824 Bacteria 8337
234 Ga0307413_10004573 3300031824 Bacteria 6043
235 Ga0307413_10113265 3300031824 Bacteria 1820
236 Ga0307410_10001362 3300031852 Bacteria 10975
237 Ga0307410_10055791 3300031852 Bacteria 2683
238 Ga0307406_10006154 3300031901 Bacteria 6602
239 Ga0307406_10007186 3300031901 Bacteria 6170
240 Ga0307407_10001011 3300031903 Bacteria 9673
241 Ga0307407_10005061 3300031903 Bacteria 5683
242 Ga0307407_10008769 3300031903 Bacteria 4665
243 Ga0307407_10012908 3300031903 Bacteria 4036
244 Ga0307407_10022334 3300031903 Bacteria 3280
245 Ga0307412_10008714 3300031911 Bacteria 5803
246 Ga0307409_100001891 3300031995 Bacteria 10681
247 Ga0307409_100006404 3300031995 Bacteria 6915
248 Ga0307409_100009568 3300031995 Bacteria 5965
249 Ga0307409_100089684 3300031995 Bacteria 2514
250 Ga0307416_100000948 3300032002 Bacteria 15360
251 Ga0307416_100029230 3300032002 Bacteria 4113
252 Ga0307416_100090769 3300032002 Bacteria 2621
253 Ga0307414_10000650 3300032004 Bacteria 17745
254 Ga0307414_10007444 3300032004 Bacteria 6150
255 Ga0307411_10003831 3300032005 Bacteria 7078
256 Ga0307411_10009280 3300032005 Bacteria 5160
257 Ga0307411_10047182 3300032005 Bacteria 2783
258 Ga0307415_100000969 3300032126 Bacteria 13175
259 Ga0307415_100003251 3300032126 Bacteria 8252
260 Ga0307415_100006800 3300032126 Bacteria 6204
261 Ga0307415_100127335 3300032126 Unclassified 1921
262 Ga0307415_100169142 3300032126 Bacteria 1702
263 Ga0373934_0002074 3300035086 Bacteria 7355
264 Ga0373934_0004888 3300035086 Bacteria 4960
265 Ga0373954_0014068 3300035118 Bacteria 3568
266 Ga0373954_0044687 3300035118 Bacteria 2068
267 Ga0373931_0014623 3300035691 Bacteria 3839
268 Ga0373935_0050439 3300035692 Bacteria 2641
269 Ga0373937_0040396 3300036401 Bacteria 4252
270 Ga0466963_0016995 3300044694 Bacteria 4532
271 Ga0466959_0036544 3300045049 Bacteria 3630
272 Ga0451576_0015443 3300045051 Bacteria 8457
273 Ga0495651_0004842 3300046462 Bacteria 10302
274 Ga0495653_0005497 3300046463 Bacteria 10321
275 Ga0495580_0005802 3300046472 Bacteria 10138
276 Ga0495639_0035127 3300046475 Bacteria 2243
277 Ga0495662_0101807 3300046476 Bacteria 1405
278 Ga0495664_0021492 3300046477 Bacteria 3727
279 Ga0495594_0012058 3300046499 Bacteria 4499
280 Ga0495628_0004359 3300046516 Bacteria 12550
281 Ga0495652_0021262 3300046529 Bacteria 5769
282 Ga0495587_0000271 3300046536 Bacteria 37153
283 Ga0495621_0002844 3300046539 Bacteria 4709
284 Ga0495645_0002200 3300046543 Bacteria 13253
285 Ga0495667_0000899 3300046559 Bacteria 19206
286 Ga0495667_0001513 3300046559 Bacteria 15343
287 Ga0495588_0035558 3300046674 Bacteria 2525
288 Ga0495599_0001212 3300046678 Bacteria 14627
289 Ga0495646_0063014 3300046680 Bacteria 2203
290 Ga0495613_0041633 3300046689 Bacteria 3401
291 Ga0495613_0057770 3300046689 Bacteria 2849
292 Ga0495600_0043047 3300046809 Bacteria 2944
293 Ga0495675_0089505 3300047444 Bacteria 1932
294 Ga0495684_0080965 3300047471 Unclassified 2465
295 Ga0495602_0024389 3300048088 Bacteria 5868
296 Ga0496107_0107969 3300048910 Bacteria 2044
297 Ga0496112_0013325 3300048915 Bacteria 7589
298 Ga0496112_0028114 3300048915 Bacteria 5425
299 Ga0496112_0157674 3300048915 Unclassified 2236
300 Ga0496113_0069097 3300048916 Bacteria 2682
301 Ga0501033_0001200 3300049570 Bacteria 23361
302 Ga0501036_0065875 3300049572 Bacteria 3065
303 Ga0501038_0015302 3300049574 Bacteria 6974
304 Ga0501039_0124726 3300049575 Bacteria 2020
305 Ga0501041_0034387 3300049577 Bacteria 3068
306 Ga0501041_0068852 3300049577 Bacteria 2170
307 Ga0501042_0007269 3300049578 Bacteria 7244
308 Ga0501043_0123948 3300049579 Bacteria 2026
309 Ga0501046_0088669 3300049580 Bacteria 2382
310 Ga0501074_0070707 3300049590 Bacteria 2509
311 Ga0501075_0049519 3300049591 Bacteria 3158
312 Ga0501249_004434 3300049679 Bacteria 2853
313 Ga0501079_0064955 3300049741 Bacteria 2815
314 Ga0501081_0090532 3300049743 Bacteria 2151
315 Ga0501081_0150396 3300049743 Bacteria 1672
316 Ga0501035_0025463 3300049822 Bacteria 5424
317 Ga0501044_0001657 3300049823 Bacteria 26156
318 nmdc:mga09592_14990_c1 3300050508 Bacteria 6331
319 nmdc:mga0qj67_21592_c1 3300050509 Bacteria 4939
320 nmdc:mga06r32_184127_c1 3300050510 Bacteria 2075
321 nmdc:mga08y16_239345_c1 3300050511 Bacteria 1876
322 nmdc:mga0n895_31878_c1 3300050512 Bacteria 5053
323 nmdc:mga0rr50_44095_c1 3300050513 Bacteria 3269
324 nmdc:mga08x19_69683_c1 3300050514 Bacteria 2291
325 Ga0495601_0088712 3300053077 Bacteria 1988
326 Ga0307405_10008794
327 rootL2_10037423
328 Ga0070658_10010785
329 Ga0070658_10018188
330 Ga0070676_10017827
331 Ga0070683_100002048
332 Ga0070683_100009944
333 Ga0070683_100016229
334 Ga0070683_100026714
335 Ga0070683_100048817
336 Ga0070683_100050496
337 Ga0070683_100161127
338 Ga0070690_100096942
339 Ga0070670_100103658
340 Ga0068869_100005328
341 Ga0070680_100000903
342 Ga0070680_100000910
343 Ga0070680_100026378
344 Ga0070680_100074573
345 Ga0070682_100006282
346 Ga0070682_100030031
347 Ga0070682_100074391
348 Ga0068868_100003226
349 Ga0068868_100011249
350 Ga0070660_100007573
351 Ga0070689_100008048
352 Ga0070689_100018146
353 Ga0070691_10014532
354 Ga0070661_100075503
355 Ga0070661_100105797
356 Ga0070675_100015173
357 Ga0070671_100016464
358 Ga0070674_100017655
359 Ga0070673_100012181
360 Ga0070659_100065888
361 Ga0070709_10013283
362 Ga0070714_100006676
363 Ga0070694_100034178
364 Ga0070708_100000468
365 Ga0070708_100146524
366 Ga0070681_10001365
367 Ga0070681_10006930
368 Ga0070681_10021946
369 Ga0070681_10035580
370 Ga0070681_10109537
371 Ga0070681_10230218
372 Ga0068867_100006612
373 Ga0068867_100017613
374 Ga0070706_100125282
375 Ga0070706_100177916
376 Ga0070698_100001191
377 Ga0070698_100005143
378 Ga0070698_100018137
379 Ga0070698_100058133
380 Ga0070699_100023161
381 Ga0070699_100069959
382 Ga0070699_100070812
383 Ga0070699_100196910
384 Ga0070679_100003962
385 Ga0070679_100012695
386 Ga0070679_100014567
387 Ga0070679_100020406
388 Ga0070679_100028374
389 Ga0070684_100000670
390 Ga0070684_100009149
391 Ga0070684_100011077
392 Ga0070684_100012872
393 Ga0070684_100017983
394 Ga0070684_100034208
395 Ga0070684_100066204
396 Ga0070684_100068297
397 Ga0068853_100052253
398 Ga0068853_100124961
399 Ga0070672_100032721
400 Ga0070672_100040003
401 Ga0070695_100000708
402 Ga0070695_100018470
403 Ga0070696_100007194
404 Ga0070693_100000799
405 Ga0070693_100011748
406 Ga0068855_100002422
407 Ga0068855_100003298
408 Ga0068855_100012716
409 Ga0068855_100068268
410 Ga0068855_100200963
411 Ga0070664_100050952
412 Ga0070664_100067946
413 Ga0070664_100177076
414 Ga0068856_100012754
415 Ga0068856_100015322
416 Ga0068856_100017754
417 Ga0070702_100004416
418 Ga0068852_100007922
419 Ga0068852_100015246
420 Ga0068852_100018645
421 Ga0068852_100024710
422 Ga0068859_100024269
423 Ga0068866_10009315
424 Ga0068863_100007230
425 Ga0068858_100053381
426 Ga0097621_100047253
427 Ga0068871_100039390
428 Ga0075428_100234524
429 Ga0075431_100007230
430 Ga0075431_100306934
431 Ga0068865_100044583
432 Ga0075436_100004633
433 Ga0097620_100024268
434 Ga0105240_10004336
435 Ga0105240_10020939
436 Ga0105240_10145070
437 Ga0105245_10012762
438 Ga0105245_10068395
439 Ga0105241_10000065
440 Ga0105241_10018230
441 Ga0105242_10038978
442 Ga0105248_10004453
443 Ga0105237_10125372
444 Ga0105238_10016123
445 Ga0105239_10014020
446 Ga0105246_10010272
447 Ga0157373_10002361
448 Ga0157373_10021866
449 Ga0157373_10037840
450 Ga0157371_10010010
451 Ga0157370_10006871
452 Ga0157370_10023825
453 Ga0157370_10027142
454 Ga0157370_10096064
455 Ga0157369_10015172
456 Ga0157369_10049398
457 Ga0157369_10240672
458 Ga0157374_10006317
459 Ga0157374_10193690
460 Ga0157378_10041013
461 Ga0157372_10010254
462 Ga0157372_10013668
463 Ga0157372_10015127
464 Ga0157372_10019940
465 Ga0157372_10027609
466 Ga0157372_10031146
467 Ga0157372_10052666
468 Ga0157372_10144122
469 Ga0157372_10212285
470 Ga0157375_10088553
471 Ga0157375_10211291
472 Ga0163163_10043623
473 Ga0157379_10038871
474 Ga0163161_10028541
475 Ga0207642_10007618
476 Ga0207699_10040908
477 Ga0207705_10066792
478 Ga0207705_10105691
479 Ga0207684_10108170
480 Ga0207654_10000265
481 Ga0207707_10002248
482 Ga0207707_10007042
483 Ga0207707_10013238
484 Ga0207707_10015088
485 Ga0207707_10018584
486 Ga0207707_10026436
487 Ga0207707_10134402
488 Ga0207707_10191428
489 Ga0207695_10003314
490 Ga0207695_10014039
491 Ga0207695_10014812
492 Ga0207660_10003035
493 Ga0207660_10011335
494 Ga0207660_10029006
495 Ga0207660_10037563
496 Ga0207660_10098986
497 Ga0207657_10012032
498 Ga0207657_10039652
499 Ga0207649_10005304
500 Ga0207649_10006062
501 Ga0207649_10093511
502 Ga0207652_10001170
503 Ga0207652_10002941
504 Ga0207652_10010765
505 Ga0207652_10022351
506 Ga0207652_10041271
507 Ga0207652_10046096
508 Ga0207652_10069192
509 Ga0207681_10023319
510 Ga0207694_10025881
511 Ga0207659_10004072
512 Ga0207664_10019901
513 Ga0207690_10025830
514 Ga0207706_10003360
515 Ga0207706_10004677
516 Ga0207686_10008927
517 Ga0207704_10010131
518 Ga0207691_10011708
519 Ga0207711_10038932
520 Ga0207689_10005834
521 Ga0207661_10004391
522 Ga0207661_10008564
523 Ga0207661_10017981
524 Ga0207661_10063384
525 Ga0207661_10116751
526 Ga0207679_10001593
527 Ga0207679_10009511
528 Ga0207679_10050985
529 Ga0207679_10061090
530 Ga0207667_10026166
531 Ga0207667_10027043
532 Ga0207667_10241455
533 Ga0207658_10013188
534 Ga0207658_10106701
535 Ga0207677_10009123
536 Ga0207639_10028710
537 Ga0207639_10114378
538 Ga0207708_10013302
539 Ga0207702_10004313
540 Ga0207702_10199011
541 Ga0207648_10007893
542 Ga0207648_10036938
543 Ga0207648_10124185
544 Ga0207676_10169780
545 Ga0207674_10000356
546 Ga0207674_10008361
547 Ga0207698_10032864
548 Ga0207698_10038310
549 Ga0207698_10241176
550 Ga0209968_1003198
551 Ga0209966_1003769
552 Ga0209998_10000440
553 Ga0307408_100061797
554 Ga0307408_100079712
555 Ga0307405_10002834
556 Ga0307405_10008975
557 Ga0307405_10057292
558 Ga0307413_10001847
559 Ga0307413_10004573
560 Ga0307413_10113265
561 Ga0307410_10001362
562 Ga0307410_10055791
563 Ga0307406_10006154
564 Ga0307406_10007186
565 Ga0307407_10001011
566 Ga0307407_10005061
567 Ga0307407_10008769
568 Ga0307407_10012908
569 Ga0307407_10022334
570 Ga0307412_10008714
571 Ga0307409_100001891
572 Ga0307409_100006404
573 Ga0307409_100009568
574 Ga0307409_100089684
575 Ga0307416_100000948
576 Ga0307416_100029230
577 Ga0307416_100090769
578 Ga0307414_10000650
579 Ga0307414_10007444
580 Ga0307411_10003831
581 Ga0307411_10009280
582 Ga0307411_10047182
583 Ga0307415_100000969
584 Ga0307415_100003251
585 Ga0307415_100006800
586 Ga0307415_100127335
587 Ga0307415_100169142
588 Ga0373934_0002074
589 Ga0373934_0004888
590 Ga0373954_0014068
591 Ga0373954_0044687
592 Ga0373931_0014623
593 Ga0373935_0050439
594 Ga0373937_0040396
595 Ga0466963_0016995
596 Ga0466959_0036544
597 Ga0451576_0015443
598 Ga0495651_0004842
599 Ga0495653_0005497
600 Ga0495580_0005802
601 Ga0495639_0035127
602 Ga0495662_0101807
603 Ga0495664_0021492
604 Ga0495594_0012058
605 Ga0495628_0004359
606 Ga0495652_0021262
607 Ga0495587_0000271
608 Ga0495621_0002844
609 Ga0495645_0002200
610 Ga0495667_0000899
611 Ga0495667_0001513
612 Ga0495588_0035558
613 Ga0495599_0001212
614 Ga0495646_0063014
615 Ga0495613_0041633
616 Ga0495613_0057770
617 Ga0495600_0043047
618 Ga0495675_0089505
619 Ga0495684_0080965
620 Ga0495602_0024389
621 Ga0496107_0107969
622 Ga0496112_0013325
623 Ga0496112_0028114
624 Ga0496112_0157674
625 Ga0496113_0069097
626 Ga0501033_0001200
627 Ga0501036_0065875
628 Ga0501038_0015302
629 Ga0501039_0124726
630 Ga0501041_0034387
631 Ga0501041_0068852
632 Ga0501042_0007269
633 Ga0501043_0123948
634 Ga0501046_0088669
635 Ga0501074_0070707
636 Ga0501075_0049519
637 Ga0501249_004434
638 Ga0501079_0064955
639 Ga0501081_0090532
640 Ga0501081_0150396
641 Ga0501035_0025463
642 Ga0501044_0001657
643 nmdc:mga09592_14990_c1
644 nmdc:mga0qj67_21592_c1
645 nmdc:mga06r32_184127_c1
646 nmdc:mga08y16_239345_c1
647 nmdc:mga0n895_31878_c1
648 nmdc:mga0rr50_44095_c1
649 nmdc:mga08x19_69683_c1
650 Ga0495601_0088712

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07837

FTCD_N

Formiminotransferase domain, N-terminal subdomain

3

179

0.99

PF04961

FTCD_C

Formiminotransferase-cyclodeaminase

321

502

0.98

PF02971

FTCD

Formiminotransferase domain

181

299

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qd1-assembly1.cif.gz_B the crystal structure of the formiminotransferase domain of formiminotransferase-cyclodeaminase. 0.8789 2 306
1qd1-assembly1.cif.gz_A the crystal structure of the formiminotransferase domain of formiminotransferase-cyclodeaminase. 0.8781 2 306
1qd1-assembly1.cif.gz_A the crystal structure of the formiminotransferase domain of formiminotransferase-cyclodeaminase. 0.8387 2 306
4rbt-assembly2.cif.gz_C pdua k26a s40l mutant, from salmonella enterica serovar typhimurium lt2 0.8337 5 96
7mmx-assembly1.cif.gz_C-2 cutn from type i cut mcp 0.8263 4 71
ID Description Score Start End Superfamily
2pfdC01 Alpha Beta;2-Layer Sandwich;Formiminotransferase-cyclodeaminase; Chain B, domain 1;Formiminotransferase, N-terminal subdomain 0.9647 1 182 3.30.990.10
2pfdC01 Alpha Beta;2-Layer Sandwich;Formiminotransferase-cyclodeaminase; Chain B, domain 1;Formiminotransferase, N-terminal subdomain 0.9594 1 182 3.30.990.10
af_A0A0P0WRU8_12_147_3.30.990.10 Alpha Beta;2-Layer Sandwich;Formiminotransferase-cyclodeaminase; Chain B, domain 1;Formiminotransferase, N-terminal subdomain 0.94 2 119 3.30.990.10
af_Q75ID3_18_216_3.30.990.10 Alpha Beta;2-Layer Sandwich;Formiminotransferase-cyclodeaminase; Chain B, domain 1;Formiminotransferase, N-terminal subdomain 0.8877 1 181 3.30.990.10
af_A0A1D8PJW1_4_96_1.20.58.400 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;t-snare proteins 0.8778 404 495 1.20.58.400
ID Description Score Start End GO Terms
AF-A0A353NPK2-F1-model_v4 Glutamate formimidoyltransferase 0.9936 30 176 GO:0005542
GO:0016740
AF-A0A7J3U808-F1-model_v4 Glutamate formimidoyltransferase (EC 2.1.2.5) 0.9931 1 172 GO:0005542
GO:0030409
AF-A0A660SHF1-F1-model_v4 Glutamate formimidoyltransferase (EC 2.1.2.5) 0.9878 2 182 GO:0005542
GO:0030409
AF-A0A2N5Z5P1-F1-model_v4 Glutamate formimidoyltransferase 0.9876 1 124 GO:0005542
GO:0016740
AF-A0A7J3U808-F1-model_v4 Glutamate formimidoyltransferase (EC 2.1.2.5) 0.9874 1 172 GO:0005542
GO:0030409

Map