F406699

General Info

Members Datasets Scaffolds Average Seq Length
322 240 644 575

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2852635781|2852640501
Length 634
Sequence TDAAGAAGAADTADVAGVAGVAGVAGVAGVAGVAGVAGVAGAAGVADTAGTATAPTRRRLLAGAAGAGLAVATGVRQGARAADLPPLGTYDVVVIGSGAAGMTAALTAARQGLACVVVEKAPTFGGSAARSGAGIWTPNNSVILAAGVPDTPAKAAAYLAAVVGPDVPADRQRAFLTHGPATISFVMANSPLRFRWMEGYSDYYPELPGGLPNGRSIEPDQFDGNLLGAELAHLNPPYMDVPAGMVVFSADYKWVALAAVNARGAAVAAQCLARGVKAATLGQKPLTMGQALAAGLRAGLRSAGVPVWLNTPLTDLHVENGTVTGAVVTRDGAPGLVRARRGVIVGSGGFEHNAEMRERFQRQPIGTDWTVGAKENTGDGIRAGERLGAALDLMEDAWWGPAIPIPGRPYFCLAERTLPGGLLVNGAGRRFVNEAAPYSDVVHTMYDVHDTDPAIPCWLIVDQNYRNRYLFKDVLPTLPFPDAWYDSGAAHKEWTLDALAASIGVPAAALRSSVNRFNAQARRGEDLDFHRGDSAYDHYYTDPSVLPNSCLAPLWLPPFHAFRIVPGDLGTKGGLRTDARARVLREDGSVIPGLYAAGNASAAVMGHSYAGAGSTIGPAMTFGYVAARDIAGAL

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
35 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
36 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
37 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
57 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
61 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
66 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
67 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
68 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
71 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
72 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
73 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
77 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
78 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
79 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
80 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
81 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
82 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
83 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
84 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
87 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
92 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
95 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
101 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
104 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
109 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
113 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
114 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
115 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
116 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
117 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
118 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
119 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
123 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
126 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
129 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
130 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
131 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
132 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
133 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
134 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
137 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
150 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
151 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
156 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
157 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
174 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
177 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
178 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
179 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
180 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
181 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
182 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
183 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
186 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
187 2508501039 Frankia saprophytica CN3 Isolate Nodule
188 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
189 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
190 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
191 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
192 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
193 2558860280 Kutzneria sp. 744 Isolate Unclassified
194 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
195 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
196 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
197 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
198 2643221647 Streptomyces sp. Root369 Isolate Unclassified
199 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
200 2643221714 Streptomyces sp. Root264 Isolate Unclassified
201 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
202 2687453737 Frankia sp. BMG5.36 Isolate Nodule
203 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
204 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
205 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
206 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
207 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
208 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
209 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
210 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
211 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
212 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
213 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
214 2867428634 Streptomyces sp. RP5T Isolate Unclassified
215 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
216 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
217 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
218 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
219 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
220 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
221 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
222 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
223 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
224 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
225 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
226 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
227 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
228 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
229 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
230 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
231 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
232 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
233 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
234 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
235 8002775197 Frankia nepalensis CN7 Isolate Nodule
236 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
237 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
238 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
239 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
240 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 81.99
Metatranscriptomes 0.62
Isolates 17.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.97
Nodule 1.55
Rhizoplane 4.35
Rhizosphere 64.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000968 3300003203 Bacteria 13503
2 Ga0006562J51391_1083164 3300003578 Bacteria 9865
3 Ga0006562J51391_1083165 3300003578 Bacteria 9580
4 Ga0070668_100000415 3300005347 Bacteria 28362
5 Ga0070668_100000989 3300005347 Bacteria 19947
6 Ga0070668_100002045 3300005347 Bacteria 14759
7 Ga0070668_100034497 3300005347 Bacteria 3856
8 Ga0070671_100068647 3300005355 Bacteria 2957
9 Ga0070667_100000679 3300005367 Bacteria 32958
10 Ga0070667_100088786 3300005367 Bacteria 2655
11 Ga0070667_100110558 3300005367 Bacteria 2382
12 Ga0070710_10000777 3300005437 Bacteria 15246
13 Ga0070663_100003409 3300005455 Bacteria 9177
14 Ga0070663_100034537 3300005455 Bacteria 3503
15 Ga0070698_100004030 3300005471 Bacteria 16168
16 Ga0068853_100009356 3300005539 Bacteria 7900
17 Ga0070665_100004170 3300005548 Bacteria 15207
18 Ga0068855_100007628 3300005563 Bacteria 13083
19 Ga0068854_100002125 3300005578 Bacteria 12164
20 Ga0068852_100025502 3300005616 Bacteria 4791
21 Ga0068859_100000276 3300005617 Bacteria 51118
22 Ga0068863_100000768 3300005841 Bacteria 32211
23 Ga0068858_100008729 3300005842 Bacteria 9731
24 Ga0068858_100046072 3300005842 Bacteria 4043
25 Ga0068860_100000232 3300005843 Bacteria 85501
26 Ga0068862_100000055 3300005844 Bacteria 142386
27 Ga0081539_10001038 3300005985 Bacteria 51162
28 Ga0081539_10004312 3300005985 Bacteria 15895
29 Ga0070717_10020774 3300006028 Bacteria 5169
30 Ga0075368_10008006 3300006042 Bacteria 3748
31 Ga0075363_100027856 3300006048 Bacteria 2901
32 Ga0075431_100041315 3300006847 Bacteria 4754
33 Ga0097620_100000276 3300006931 Bacteria 51118
34 Ga0105240_10014489 3300009093 Bacteria 10765
35 Ga0105247_10000029 3300009101 Bacteria 198763
36 Ga0105241_10002540 3300009174 Bacteria 13697
37 Ga0105248_10000136 3300009177 Bacteria 85507
38 Ga0105248_10072935 3300009177 Bacteria 3859
39 Ga0105238_10004425 3300009551 Bacteria 13936
40 Ga0105238_10136739 3300009551 Bacteria 2428
41 Ga0105249_10000077 3300009553 Bacteria 141905
42 Ga0105246_10068006 3300011119 Bacteria 2497
43 Ga0157374_10022189 3300013296 Bacteria 5661
44 Ga0157372_10096754 3300013307 Bacteria 3365
45 Ga0182008_10005032 3300014497 Bacteria 7603
46 Ga0182007_10001587 3300015262 Bacteria 12117
47 Ga0183367_1002 3300015688 Bacteria 1101531
48 Ga0207692_10031376 3300025898 Bacteria 2545
49 Ga0207710_10000046 3300025900 Bacteria 198754
50 Ga0207647_10002831 3300025904 Bacteria 13090
51 Ga0207647_10007099 3300025904 Bacteria 8122
52 Ga0207695_10007673 3300025913 Bacteria 13663
53 Ga0207671_10000307 3300025914 Bacteria 72252
54 Ga0207681_10000341 3300025923 Bacteria 33602
55 Ga0207694_10001463 3300025924 Bacteria 20199
56 Ga0207711_10000111 3300025941 Bacteria 85466
57 Ga0207711_10062247 3300025941 Bacteria 3219
58 Ga0207712_10000017 3300025961 Bacteria 337943
59 Ga0207668_10003272 3300025972 Bacteria 9498
60 Ga0207668_10004305 3300025972 Bacteria 8359
61 Ga0207668_10009318 3300025972 Bacteria 5878
62 Ga0207658_10000612 3300025986 Bacteria 31708
63 Ga0207703_10023172 3300026035 Bacteria 4876
64 Ga0207703_10031170 3300026035 Bacteria 4215
65 Ga0207678_10001113 3300026067 Bacteria 24636
66 Ga0207678_10094235 3300026067 Bacteria 2558
67 Ga0207641_10000378 3300026088 Bacteria 53027
68 Ga0207698_10059836 3300026142 Bacteria 2959
69 Ga0209371_1009372 3300027312 Bacteria 3119
70 Ga0268266_10031553 3300028379 Bacteria 4500
71 Ga0268266_10076216 3300028379 Bacteria 2914
72 Ga0268265_10000067 3300028380 Bacteria 142389
73 Ga0268264_10000146 3300028381 Bacteria 165733
74 Ga0265336_10001515 3300028666 Bacteria 10491
75 Ga0307517_10002570 3300028786 Bacteria 28904
76 Ga0307517_10015610 3300028786 Bacteria 10074
77 Ga0307517_10084819 3300028786 Bacteria 2661
78 Ga0307515_10000192 3300028794 Bacteria 149030
79 Ga0307515_10000258 3300028794 Bacteria 131660
80 Ga0307515_10006596 3300028794 Bacteria 23161
81 Ga0307515_10008714 3300028794 Bacteria 19719
82 Ga0307515_10044491 3300028794 Bacteria 6857
83 Ga0307515_10163296 3300028794 Bacteria 2259
84 Ga0307515_10165609 3300028794 Bacteria 2230
85 Ga0307515_10191017 3300028794 Bacteria 1958
86 Ga0265338_10002127 3300028800 Bacteria 30414
87 Ga0307511_10000080 3300030521 Bacteria 80604
88 Ga0307511_10005077 3300030521 Bacteria 13424
89 Ga0307512_10011862 3300030522 Bacteria 8235
90 Ga0307512_10012117 3300030522 Bacteria 8150
91 Ga0307512_10031555 3300030522 Bacteria 4585
92 Ga0265340_10000630 3300031247 Bacteria 19761
93 Ga0265327_10000559 3300031251 Bacteria 63553
94 Ga0307513_10000202 3300031456 Bacteria 85897
95 Ga0307513_10007180 3300031456 Bacteria 14468
96 Ga0307513_10010075 3300031456 Bacteria 11904
97 Ga0307513_10053559 3300031456 Bacteria 4335
98 Ga0307509_10007990 3300031507 Bacteria 13634
99 Ga0307509_10018230 3300031507 Bacteria 8051
100 Ga0307509_10021666 3300031507 Bacteria 7261
101 Ga0307509_10080127 3300031507 Bacteria 3378
102 Ga0307508_10002491 3300031616 Bacteria 19419
103 Ga0307508_10009180 3300031616 Bacteria 9108
104 Ga0307508_10057806 3300031616 Bacteria 3432
105 Ga0307516_10006256 3300031730 Bacteria 13995
106 Ga0307516_10019224 3300031730 Bacteria 7078
107 Ga0307516_10039403 3300031730 Bacteria 4710
108 Ga0307516_10044377 3300031730 Bacteria 4399
109 Ga0307518_10002510 3300031838 Bacteria 13387
110 Ga0307518_10023890 3300031838 Bacteria 4407
111 Ga0307518_10026813 3300031838 Bacteria 4155
112 Ga0307411_10001606 3300032005 Bacteria 9400
113 Ga0307411_10039254 3300032005 Bacteria 2993
114 Ga0307507_10004675 3300033179 Bacteria 23774
115 Ga0307507_10017461 3300033179 Bacteria 8235
116 Ga0307507_10058748 3300033179 Bacteria 3607
117 Ga0307507_10060112 3300033179 Bacteria 3551
118 Ga0307510_10012693 3300033180 Bacteria 9996
119 Ga0307510_10016240 3300033180 Bacteria 8791
120 Ga0307510_10062073 3300033180 Bacteria 3822
121 Ga0307510_10109810 3300033180 Bacteria 2505
122 Ga0373940_0000492 3300035088 Bacteria 6147
123 Ga0373942_0000678 3300035207 Bacteria 9503
124 Ga0373935_0004982 3300035692 Bacteria 7814
125 Ga0395905_0001381 3300037471 Bacteria 29391
126 Ga0439436_0002372 3300041404 Bacteria 5649
127 Ga0439439_0002880 3300041406 Bacteria 3730
128 Ga0451795_0497343 3300041456 Bacteria 2189
129 Ga0451849_1105725 3300041505 Bacteria 2699
130 Ga0451843_1249864 3300041509 Bacteria 2134
131 Ga0451853_0592958 3300041512 Bacteria 3657
132 Ga0439448_0004640 3300042005 Bacteria 3886
133 Ga0439457_002605 3300042014 Bacteria 5098
134 Ga0439457_005943 3300042014 Bacteria 3016
135 Ga0450894_000512 3300042131 Bacteria 6642
136 Ga0466969_0005180 3300044656 Bacteria 6931
137 Ga0466969_0043163 3300044656 Bacteria 2247
138 Ga0466972_0005789 3300044658 Bacteria 6193
139 Ga0466965_0001534 3300044683 Bacteria 9371
140 Ga0466965_0003373 3300044683 Bacteria 6994
141 Ga0466965_0041885 3300044683 Bacteria 2257
142 Ga0466961_0014065 3300044693 Bacteria 5132
143 Ga0466968_0001343 3300044735 Bacteria 8770
144 Ga0466970_0010031 3300044765 Bacteria 4797
145 Ga0466960_0006120 3300044901 Bacteria 4813
146 Ga0466960_0029505 3300044901 Bacteria 2517
147 Ga0466959_0029736 3300045049 Bacteria 4047
148 Ga0466959_0030992 3300045049 Bacteria 3958
149 Ga0466967_0004058 3300045976 Bacteria 9769
150 Ga0495592_0003440 3300046454 Bacteria 11360
151 Ga0495592_0019110 3300046454 Bacteria 5214
152 Ga0495603_0023548 3300046455 Bacteria 3724
153 Ga0495629_0002649 3300046459 Bacteria 13721
154 Ga0495629_0006686 3300046459 Bacteria 8528
155 Ga0495629_0015606 3300046459 Bacteria 5453
156 Ga0495629_0090853 3300046459 Bacteria 2130
157 Ga0495638_0002021 3300046460 Bacteria 17284
158 Ga0495651_0011877 3300046462 Bacteria 6700
159 Ga0495651_0017621 3300046462 Bacteria 5527
160 Ga0495580_0020351 3300046472 Bacteria 4912
161 Ga0495605_0000809 3300046474 Bacteria 22331
162 Ga0495662_0000258 3300046476 Bacteria 22452
163 Ga0495664_0000650 3300046477 Bacteria 17686
164 Ga0495664_0002046 3300046477 Bacteria 10789
165 Ga0495594_0034567 3300046499 Bacteria 2750
166 Ga0495606_0021975 3300046507 Bacteria 4664
167 Ga0495608_0011611 3300046511 Bacteria 6130
168 Ga0495610_0044239 3300046512 Bacteria 2212
169 Ga0495628_0045040 3300046516 Bacteria 3509
170 Ga0495631_0030266 3300046518 Bacteria 2456
171 Ga0495632_0078688 3300046519 Bacteria 1575
172 Ga0495643_0001849 3300046522 Bacteria 17967
173 Ga0495643_0017601 3300046522 Bacteria 4173
174 Ga0495652_0002948 3300046529 Bacteria 17123
175 Ga0495652_0007352 3300046529 Bacteria 10156
176 Ga0495652_0018508 3300046529 Bacteria 6210
177 Ga0495665_0043384 3300046531 Bacteria 2392
178 Ga0495640_0004067 3300046533 Bacteria 11704
179 Ga0495640_0061617 3300046533 Bacteria 2547
180 Ga0495586_0001757 3300046535 Bacteria 11832
181 Ga0495587_0002356 3300046536 Bacteria 12624
182 Ga0495587_0021622 3300046536 Bacteria 3969
183 Ga0495645_0001623 3300046543 Bacteria 15223
184 Ga0495622_0011260 3300046557 Bacteria 4129
185 Ga0495667_0055418 3300046559 Bacteria 2607
186 Ga0495634_0003920 3300046642 Bacteria 11813
187 Ga0495625_0053448 3300046660 Bacteria 2888
188 Ga0495635_0012613 3300046663 Bacteria 5927
189 Ga0495657_0010868 3300046675 Bacteria 6833
190 Ga0495646_0014154 3300046680 Bacteria 5073
191 Ga0495613_0000548 3300046689 Bacteria 31085
192 Ga0495613_0018787 3300046689 Bacteria 5151
193 Ga0495613_0044647 3300046689 Bacteria 3277
194 Ga0495671_0010318 3300046692 Bacteria 5183
195 Ga0495649_0029526 3300046694 Bacteria 3032
196 Ga0495600_0015860 3300046809 Bacteria 4772
197 Ga0495600_0037960 3300046809 Bacteria 3133
198 Ga0495660_0011784 3300046810 Bacteria 5070
199 Ga0495581_0041983 3300047315 Bacteria 2648
200 Ga0495604_0026286 3300047317 Bacteria 4634
201 Ga0495636_0002832 3300047318 Bacteria 6693
202 Ga0495674_0022527 3300047319 Bacteria 5810
203 Ga0495676_0001143 3300047321 Bacteria 22539
204 Ga0495676_0001468 3300047321 Bacteria 20351
205 Ga0495687_006085 3300047443 Bacteria 7500
206 Ga0495687_006521 3300047443 Bacteria 7130
207 Ga0495675_0052675 3300047444 Bacteria 2583
208 Ga0495685_000677 3300047447 Bacteria 10400
209 Ga0495685_020525 3300047447 Bacteria 2271
210 Ga0495681_0008516 3300047470 Bacteria 6422
211 Ga0495681_0041150 3300047470 Bacteria 2244
212 Ga0495684_0057300 3300047471 Bacteria 2969
213 Ga0495686_0013779 3300047472 Bacteria 5601
214 Ga0495593_0002812 3300047673 Bacteria 10484
215 Ga0495602_0114617 3300048088 Bacteria 2182
216 Ga0495614_0008959 3300048089 Bacteria 4439
217 Ga0495614_0037359 3300048089 Bacteria 2083
218 Ga0496100_0000395 3300048903 Bacteria 21117
219 Ga0496100_0005861 3300048903 Bacteria 6651
220 Ga0496101_0026525 3300048904 Bacteria 4028
221 Ga0496102_0000268 3300048905 Bacteria 66717
222 Ga0496103_0000237 3300048906 Bacteria 53762
223 Ga0496104_0126771 3300048907 Bacteria 2451
224 Ga0496105_0013560 3300048908 Bacteria 6474
225 Ga0496106_0002016 3300048909 Bacteria 15280
226 Ga0496107_0003083 3300048910 Bacteria 11068
227 Ga0496108_0000041 3300048911 Bacteria 147365
228 Ga0496113_0000755 3300048916 Bacteria 16642
229 Ga0496114_0000629 3300048917 Bacteria 26088
230 Ga0496115_0000824 3300048918 Bacteria 22725
231 Ga0496117_0001548 3300048920 Bacteria 32660
232 Ga0496118_0001284 3300048921 Bacteria 38348
233 Ga0496120_0007303 3300048923 Bacteria 8249
234 Ga0496120_0023509 3300048923 Bacteria 3858
235 Ga0496121_0003814 3300048924 Bacteria 21004
236 Ga0496122_0035620 3300048925 Bacteria 4043
237 Ga0496123_0004488 3300048926 Bacteria 14627
238 Ga0496126_0004792 3300048929 Bacteria 15900
239 Ga0496126_0008511 3300048929 Bacteria 11056
240 Ga0495678_026609 3300049459 Bacteria 2466
241 Ga0501034_0027992 3300049571 Bacteria 5731
242 Ga0501036_0007295 3300049572 Bacteria 9005
243 Ga0501037_0001502 3300049573 Bacteria 17059
244 Ga0501038_0001711 3300049574 Bacteria 20376
245 Ga0501039_0000526 3300049575 Bacteria 27681
246 Ga0501043_0000633 3300049579 Bacteria 31114
247 Ga0501067_0028325 3300049583 Bacteria 3103
248 Ga0501070_0000448 3300049586 Bacteria 37506
249 Ga0501073_0019798 3300049589 Bacteria 4857
250 Ga0501044_0031803 3300049823 Bacteria 5550
251 nmdc:mga03n38_31219_c1 3300050490 Bacteria 2246
252 nmdc:mga06z11_37487_c1 3300050494 Bacteria 2401
253 nmdc:mga06r32_34760_c1 3300050510 Bacteria 4754
254 Ga0495619_0040369 3300053085 Bacteria 3051
255 Ga0500643_003208 3300053087 Bacteria 7979
256 Ga0500646_0000215 3300053090 Bacteria 17326
257 Ga0500640_005988 3300053095 Bacteria 4597
258 Ga0500556_0002645 3300053104 Bacteria 5599
259 Ga0500560_000284 3300053107 Bacteria 6406
260 Ga0500588_0001851 3300053146 Bacteria 4135
261 Ga0500600_0014644 3300053149 Bacteria 4764
262 Ga0500616_0000060 3300053153 Bacteria 252252
263 Ga0500616_0001970 3300053153 Bacteria 18263
264 Ga0500616_0003435 3300053153 Bacteria 12099
265 Ga0500616_0022141 3300053153 Bacteria 3552
266 Ga0500634_0000714 3300053161 Bacteria 11405
267 2852640501 2852635781 Bacteria 8251373
268 2508673885 2508501039 Bacteria 9978592
269 2515494377 2515154088 Bacteria 5526283
270 2515719648 2515154129 Bacteria 5584369
271 2515757464 2515154137 Bacteria 5711575
272 2516083985 2515154202 Bacteria 5471270
273 2516088943 2515154203 Bacteria 5458536
274 2559425193 2558860280 Bacteria 11429938
275 2585308227 2582581313 Bacteria 10042643
276 2585319143 2582581314 Bacteria 11452267
277 2586062071 2585427649 Bacteria 9053857
278 2616699528 2616644814 Bacteria 11555299
279 2644261733 2643221647 Bacteria 10741251
280 2644439191 2643221678 Bacteria 9540101
281 2644633506 2643221714 Bacteria 9015452
282 2676495979 2675903060 Bacteria 10051191
283 2689956043 2687453737 Bacteria 11203906
284 2753265827 2751185782 Bacteria 11227053
285 2785344534 2784746763 Bacteria 9783172
286 2785370642 2784746768 Bacteria 10036182
287 2786671825 2786546132 Bacteria 10419719
288 2808843194 2808606359 Bacteria 9866990
289 2808921550 2808606375 Bacteria 9466072
290 2809588777 2808606522 Bacteria 9488490
291 2812356900 2811994879 Bacteria 9313447
292 2862286957 2862281513 Bacteria 9621493
293 2862385133 2862382967 Bacteria 10317375
294 2863405791 2863404153 Bacteria 9672205
295 2867434292 2867428634 Bacteria 9590268
296 2877679944 2877676314 Bacteria 9512378
297 2895428721 2895427314 Bacteria 13147766
298 2902800109 2902799365 Bacteria 5419524
299 2915775366 2915768154 Bacteria 8424322
300 2935396844 2935390628 Bacteria 7043367
301 2946068965 2946064051 Bacteria 8957905
302 2954002968 2954002825 Bacteria 9173742
303 2954384903 2954380949 Bacteria 10050426
304 2954678101 2954673503 Bacteria 9685905
305 2954686057 2954682443 Bacteria 9862841
306 2954695717 2954691527 Bacteria 10720516
307 2954710909 2954701450 Bacteria 10834262
308 2954715131 2954711539 Bacteria 10867210
309 2954725073 2954721474 Bacteria 10456478
310 2954736745 2954731030 Bacteria 10243860
311 2954744006 2954740390 Bacteria 10229294
312 2954755592 2954749733 Bacteria 10366972
313 2954762946 2954759201 Bacteria 9358192
314 2990060920 2990059506 Bacteria 9321252
315 3006489831 3006486233 Bacteria 8157040
316 8002781946 8002775197 Bacteria 10728764
317 8003316642 8003314358 Bacteria 10575343
318 8008559343 8008558824 Bacteria 10610750
319 8047715950 8047710418 Bacteria 11023148
320 8047715987 8047710418 Bacteria 11023148
321 8048407904 8048406513 Bacteria 8936924
322 8055067819 8055066027 Bacteria 9479577
323 JGI25406J46586_10000968
324 Ga0006562J51391_1083164
325 Ga0006562J51391_1083165
326 Ga0070668_100000415
327 Ga0070668_100000989
328 Ga0070668_100002045
329 Ga0070668_100034497
330 Ga0070671_100068647
331 Ga0070667_100000679
332 Ga0070667_100088786
333 Ga0070667_100110558
334 Ga0070710_10000777
335 Ga0070663_100003409
336 Ga0070663_100034537
337 Ga0070698_100004030
338 Ga0068853_100009356
339 Ga0070665_100004170
340 Ga0068855_100007628
341 Ga0068854_100002125
342 Ga0068852_100025502
343 Ga0068859_100000276
344 Ga0068863_100000768
345 Ga0068858_100008729
346 Ga0068858_100046072
347 Ga0068860_100000232
348 Ga0068862_100000055
349 Ga0081539_10001038
350 Ga0081539_10004312
351 Ga0070717_10020774
352 Ga0075368_10008006
353 Ga0075363_100027856
354 Ga0075431_100041315
355 Ga0097620_100000276
356 Ga0105240_10014489
357 Ga0105247_10000029
358 Ga0105241_10002540
359 Ga0105248_10000136
360 Ga0105248_10072935
361 Ga0105238_10004425
362 Ga0105238_10136739
363 Ga0105249_10000077
364 Ga0105246_10068006
365 Ga0157374_10022189
366 Ga0157372_10096754
367 Ga0182008_10005032
368 Ga0182007_10001587
369 Ga0183367_1002
370 Ga0207692_10031376
371 Ga0207710_10000046
372 Ga0207647_10002831
373 Ga0207647_10007099
374 Ga0207695_10007673
375 Ga0207671_10000307
376 Ga0207681_10000341
377 Ga0207694_10001463
378 Ga0207711_10000111
379 Ga0207711_10062247
380 Ga0207712_10000017
381 Ga0207668_10003272
382 Ga0207668_10004305
383 Ga0207668_10009318
384 Ga0207658_10000612
385 Ga0207703_10023172
386 Ga0207703_10031170
387 Ga0207678_10001113
388 Ga0207678_10094235
389 Ga0207641_10000378
390 Ga0207698_10059836
391 Ga0209371_1009372
392 Ga0268266_10031553
393 Ga0268266_10076216
394 Ga0268265_10000067
395 Ga0268264_10000146
396 Ga0265336_10001515
397 Ga0307517_10002570
398 Ga0307517_10015610
399 Ga0307517_10084819
400 Ga0307515_10000192
401 Ga0307515_10000258
402 Ga0307515_10006596
403 Ga0307515_10008714
404 Ga0307515_10044491
405 Ga0307515_10163296
406 Ga0307515_10165609
407 Ga0307515_10191017
408 Ga0265338_10002127
409 Ga0307511_10000080
410 Ga0307511_10005077
411 Ga0307512_10011862
412 Ga0307512_10012117
413 Ga0307512_10031555
414 Ga0265340_10000630
415 Ga0265327_10000559
416 Ga0307513_10000202
417 Ga0307513_10007180
418 Ga0307513_10010075
419 Ga0307513_10053559
420 Ga0307509_10007990
421 Ga0307509_10018230
422 Ga0307509_10021666
423 Ga0307509_10080127
424 Ga0307508_10002491
425 Ga0307508_10009180
426 Ga0307508_10057806
427 Ga0307516_10006256
428 Ga0307516_10019224
429 Ga0307516_10039403
430 Ga0307516_10044377
431 Ga0307518_10002510
432 Ga0307518_10023890
433 Ga0307518_10026813
434 Ga0307411_10001606
435 Ga0307411_10039254
436 Ga0307507_10004675
437 Ga0307507_10017461
438 Ga0307507_10058748
439 Ga0307507_10060112
440 Ga0307510_10012693
441 Ga0307510_10016240
442 Ga0307510_10062073
443 Ga0307510_10109810
444 Ga0373940_0000492
445 Ga0373942_0000678
446 Ga0373935_0004982
447 Ga0395905_0001381
448 Ga0439436_0002372
449 Ga0439439_0002880
450 Ga0451795_0497343
451 Ga0451849_1105725
452 Ga0451843_1249864
453 Ga0451853_0592958
454 Ga0439448_0004640
455 Ga0439457_002605
456 Ga0439457_005943
457 Ga0450894_000512
458 Ga0466969_0005180
459 Ga0466969_0043163
460 Ga0466972_0005789
461 Ga0466965_0001534
462 Ga0466965_0003373
463 Ga0466965_0041885
464 Ga0466961_0014065
465 Ga0466968_0001343
466 Ga0466970_0010031
467 Ga0466960_0006120
468 Ga0466960_0029505
469 Ga0466959_0029736
470 Ga0466959_0030992
471 Ga0466967_0004058
472 Ga0495592_0003440
473 Ga0495592_0019110
474 Ga0495603_0023548
475 Ga0495629_0002649
476 Ga0495629_0006686
477 Ga0495629_0015606
478 Ga0495629_0090853
479 Ga0495638_0002021
480 Ga0495651_0011877
481 Ga0495651_0017621
482 Ga0495580_0020351
483 Ga0495605_0000809
484 Ga0495662_0000258
485 Ga0495664_0000650
486 Ga0495664_0002046
487 Ga0495594_0034567
488 Ga0495606_0021975
489 Ga0495608_0011611
490 Ga0495610_0044239
491 Ga0495628_0045040
492 Ga0495631_0030266
493 Ga0495632_0078688
494 Ga0495643_0001849
495 Ga0495643_0017601
496 Ga0495652_0002948
497 Ga0495652_0007352
498 Ga0495652_0018508
499 Ga0495665_0043384
500 Ga0495640_0004067
501 Ga0495640_0061617
502 Ga0495586_0001757
503 Ga0495587_0002356
504 Ga0495587_0021622
505 Ga0495645_0001623
506 Ga0495622_0011260
507 Ga0495667_0055418
508 Ga0495634_0003920
509 Ga0495625_0053448
510 Ga0495635_0012613
511 Ga0495657_0010868
512 Ga0495646_0014154
513 Ga0495613_0000548
514 Ga0495613_0018787
515 Ga0495613_0044647
516 Ga0495671_0010318
517 Ga0495649_0029526
518 Ga0495600_0015860
519 Ga0495600_0037960
520 Ga0495660_0011784
521 Ga0495581_0041983
522 Ga0495604_0026286
523 Ga0495636_0002832
524 Ga0495674_0022527
525 Ga0495676_0001143
526 Ga0495676_0001468
527 Ga0495687_006085
528 Ga0495687_006521
529 Ga0495675_0052675
530 Ga0495685_000677
531 Ga0495685_020525
532 Ga0495681_0008516
533 Ga0495681_0041150
534 Ga0495684_0057300
535 Ga0495686_0013779
536 Ga0495593_0002812
537 Ga0495602_0114617
538 Ga0495614_0008959
539 Ga0495614_0037359
540 Ga0496100_0000395
541 Ga0496100_0005861
542 Ga0496101_0026525
543 Ga0496102_0000268
544 Ga0496103_0000237
545 Ga0496104_0126771
546 Ga0496105_0013560
547 Ga0496106_0002016
548 Ga0496107_0003083
549 Ga0496108_0000041
550 Ga0496113_0000755
551 Ga0496114_0000629
552 Ga0496115_0000824
553 Ga0496117_0001548
554 Ga0496118_0001284
555 Ga0496120_0007303
556 Ga0496120_0023509
557 Ga0496121_0003814
558 Ga0496122_0035620
559 Ga0496123_0004488
560 Ga0496126_0004792
561 Ga0496126_0008511
562 Ga0495678_026609
563 Ga0501034_0027992
564 Ga0501036_0007295
565 Ga0501037_0001502
566 Ga0501038_0001711
567 Ga0501039_0000526
568 Ga0501043_0000633
569 Ga0501067_0028325
570 Ga0501070_0000448
571 Ga0501073_0019798
572 Ga0501044_0031803
573 nmdc:mga03n38_31219_c1
574 nmdc:mga06z11_37487_c1
575 nmdc:mga06r32_34760_c1
576 Ga0495619_0040369
577 Ga0500643_003208
578 Ga0500646_0000215
579 Ga0500640_005988
580 Ga0500556_0002645
581 Ga0500560_000284
582 Ga0500588_0001851
583 Ga0500600_0014644
584 Ga0500616_0000060
585 Ga0500616_0001970
586 Ga0500616_0003435
587 Ga0500616_0022141
588 Ga0500634_0000714
589 2852640501
590 2508673885
591 2515494377
592 2515719648
593 2515757464
594 2516083985
595 2516088943
596 2559425193
597 2585308227
598 2585319143
599 2586062071
600 2616699528
601 2644261733
602 2644439191
603 2644633506
604 2676495979
605 2689956043
606 2753265827
607 2785344534
608 2785370642
609 2786671825
610 2808843194
611 2808921550
612 2809588777
613 2812356900
614 2862286957
615 2862385133
616 2863405791
617 2867434292
618 2877679944
619 2895428721
620 2902800109
621 2915775366
622 2935396844
623 2946068965
624 2954002968
625 2954384903
626 2954678101
627 2954686057
628 2954695717
629 2954710909
630 2954715131
631 2954725073
632 2954736745
633 2954744006
634 2954755592
635 2954762946
636 2990060920
637 3006489831
638 8002781946
639 8003316642
640 8008559343
641 8047715950
642 8047715987
643 8048407904
644 8055067819

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

94

143

0.95

PF00890

FAD_binding_2

FAD binding domain

91

616

0.92

PF12831

FAD_oxidored

FAD dependent oxidoreductase

91

165

0.91

PF01266

DAO

FAD dependent oxidoreductase

91

181

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7p18-assembly2.cif.gz_B crystal structure of 3-ketosteroid delta1-dehydrogenase from sterolibacterium denitrificans in complex with 1,4-androstadiene-3,17-dione 0.9371 16 544
7p18-assembly2.cif.gz_B crystal structure of 3-ketosteroid delta1-dehydrogenase from sterolibacterium denitrificans in complex with 1,4-androstadiene-3,17-dione 0.9088 16 544
4c3y-assembly2.cif.gz_E crystal structure of 3-ketosteroid delta1-dehydrogenase from rhodococcus erythropolis sq1 in complex with 1,4-androstadiene-3,17- dione 0.8954 12 544
4c3x-assembly2.cif.gz_G crystal structure of 3-ketosteroid delta1-dehydrogenase from rhodococcus erythropolis sq1 0.8928 12 544
4c3y-assembly2.cif.gz_E crystal structure of 3-ketosteroid delta1-dehydrogenase from rhodococcus erythropolis sq1 in complex with 1,4-androstadiene-3,17- dione 0.8885 12 544
ID Description Score Start End Superfamily
af_P71864_2_395_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9609 15 384 3.50.50.60
af_P71864_2_395_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9011 15 384 3.50.50.60
4c3xD02 Alpha Beta;Alpha-Beta Complex;Flavocytochrome C3; Chain A, domain 1;Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 0.8872 333 478 3.90.700.10
4c3xD02 Alpha Beta;Alpha-Beta Complex;Flavocytochrome C3; Chain A, domain 1;Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 0.8698 333 478 3.90.700.10
3e1tA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8695 213 265 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A0K3B8Y3-F1-model_v4 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4) 0.9826 15 544 GO:0047571
AF-A0A3D4WJB8-F1-model_v4 FAD-dependent oxidoreductase 2 FAD binding domain-containing protein 0.9824 12 263 GO:0016491
AF-A0A327ZR13-F1-model_v4 3-oxosteroid 1-dehydrogenase 0.9814 14 544 GO:0016491
AF-A0A839XUZ3-F1-model_v4 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4) 0.9767 1 544 GO:0016491
AF-A0A3M2KUL5-F1-model_v4 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4) 0.9762 10 544 GO:0047571

Map