F406355

General Info

Members Datasets Scaffolds Average Seq Length
322 182 645 280

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100004531|Ga0068853_1000045317
Length 308
Sequence MNTSKVWFVTGASQGLGLTLVKKLLDAGYRVAATSRNAQTLKIAVGLIDSDRWLPLSVDLGNGDCIEESIRQTVAAFGRIDVVVNNAGYGMAGTLEETEDRKIRDIVDVNLVAAIAVVKQVLPVLRRQGSGYIINIGSVAGFVGAPGWAVYSATKAALAAFSEVLALDVAEFGIRVTIVEPAGFRTGFLTEGSLAYTATKLDGYDAVRKTQERYLAMSGRQAGDPEKAAEIFIALAERTDPPLHLFLGADAYSRASKKLAEMSAELEKWKELTIGVDFETPEGARPGTSTAKSPNEGPNGVGSEVHNH

Samples

Sample ID Description Type Environment
1 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
61 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
110 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
111 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
112 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
113 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
119 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
120 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
121 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
122 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
123 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
126 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
127 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
128 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
134 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
135 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
138 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
139 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
140 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
143 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
149 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
152 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
153 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
154 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
155 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
156 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
157 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
158 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
159 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
160 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
165 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
166 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
167 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
168 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
169 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
170 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
171 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
172 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
173 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
174 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
175 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
176 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
177 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
178 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
179 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
180 2738541278 Niastella sp. CF465 Isolate Unclassified
181 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
182 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.07
Metatranscriptomes 0
Isolates 0.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.66
Nodule 0
Rhizoplane 0.62
Rhizosphere 72.67
Stem 0
Stem Tuber 0
Unclassified 4.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068853_100004531 3300005539 Bacteria 10780
2 JGI25162J39368_1000005 3300002737 Bacteria 435925
3 JGI25154J39366_1000021 3300002738 Bacteria 221559
4 JGI25157J39369_1004333 3300002741 Bacteria 2612
5 JGI25153J46596_10047822 3300003215 Unclassified 1255
6 rootH1_10055678 3300003316 Bacteria 19068
7 rootH2_10034584 3300003320 Bacteria 27131
8 rootH2_10114349 3300003320 Bacteria 1573
9 rootH2_10167192 3300003320 Bacteria 1937
10 rootL2_10002261 3300003322 Bacteria 14026
11 rootL2_10056420 3300003322 Bacteria 6061
12 rootL2_10102431 3300003322 Bacteria 9028
13 rootL2_10117106 3300003322 Bacteria 5542
14 rootL2_10249900 3300003322 Bacteria 1591
15 rootH1_10009456 3300003323 Bacteria 35353
16 rootH1_10026982 3300003323 Bacteria 35823
17 rootH1_10068307 3300003316 Bacteria 2393
18 rootH1_10068307 3300003323 Bacteria 8984
19 rootH1_10096805 3300003323 Bacteria 1934
20 rootH1_10116592 3300003323 Bacteria 3740
21 JGI25160J50197_1000453 3300003354 Bacteria 25592
22 Ga0055526_1014726 3300003771 Bacteria 3191
23 Ga0055528_1000198 3300003790 Bacteria 51108
24 Ga0055530_10017078 3300003791 Bacteria 2286
25 Ga0055531_10000225 3300003794 Bacteria 62492
26 Ga0055543_1010281 3300004625 Bacteria 1967
27 Ga0065165_1000182 3300005262 Bacteria 110108
28 Ga0070683_100087114 3300005329 Bacteria 2928
29 Ga0068869_100025715 3300005334 Bacteria 4091
30 Ga0068869_100160077 3300005334 Unclassified 1752
31 Ga0070666_10000044 3300005335 Bacteria 111020
32 Ga0070666_10086960 3300005335 Bacteria 2142
33 Ga0070666_10171986 3300005335 Unclassified 1517
34 Ga0068868_100413332 3300005338 Bacteria 1166
35 Ga0070673_100236807 3300005364 Unclassified 1585
36 Ga0070667_100104295 3300005367 Bacteria 2452
37 Ga0068867_100530695 3300005459 Bacteria 1016
38 Ga0070698_100097011 3300005471 Bacteria 2924
39 Ga0068853_100031849 3300005539 Bacteria 4463
40 Ga0068853_100272340 3300005539 Bacteria 1559
41 Ga0068855_100002223 3300005563 Bacteria 24009
42 Ga0068856_100019518 3300005614 Bacteria 6580
43 Ga0068852_100017647 3300005616 Bacteria 5605
44 Ga0068859_100000060 3300005617 Bacteria 113756
45 Ga0068864_100004208 3300005618 Bacteria 11839
46 Ga0068864_100031896 3300005618 Bacteria 4473
47 Ga0068866_10077851 3300005718 Bacteria 1772
48 Ga0068851_10020041 3300005834 Bacteria 3235
49 Ga0068863_100007997 3300005841 Bacteria 10336
50 Ga0068860_100000039 3300005843 Bacteria 232543
51 Ga0068860_100003709 3300005843 Bacteria 15706
52 Ga0068860_100016827 3300005843 Bacteria 7129
53 Ga0068860_100548057 3300005843 Bacteria 1158
54 Ga0081540_1006890 3300005983 Bacteria 8195
55 Ga0070717_10375798 3300006028 Bacteria 1274
56 Ga0075366_10208576 3300006195 Bacteria 1189
57 Ga0097621_100009751 3300006237 Bacteria 6990
58 Ga0097621_100202120 3300006237 Bacteria 1725
59 Ga0097621_100388044 3300006237 Bacteria 1248
60 Ga0068871_100007233 3300006358 Bacteria 7919
61 Ga0068871_100331927 3300006358 Bacteria 1341
62 Ga0097620_100000060 3300006931 Bacteria 113756
63 Ga0105240_10000155 3300009093 Bacteria 140485
64 Ga0105240_10001228 3300009093 Bacteria 44551
65 Ga0105240_10001605 3300009093 Bacteria 38368
66 Ga0105240_10010113 3300009093 Bacteria 13275
67 Ga0105240_10127993 3300009093 Bacteria 3049
68 Ga0105240_10131596 3300009093 Bacteria 3000
69 Ga0105240_10244045 3300009093 Bacteria 2081
70 Ga0105240_10244552 3300009093 Bacteria 2078
71 Ga0105245_10019277 3300009098 Bacteria 5973
72 Ga0105245_10228309 3300009098 Bacteria 1799
73 Ga0105247_10006269 3300009101 Bacteria 7376
74 Ga0105243_10191931 3300009148 Bacteria 1785
75 Ga0105241_10003854 3300009174 Bacteria 11115
76 Ga0105241_10046537 3300009174 Bacteria 3295
77 Ga0105241_10160371 3300009174 Bacteria 1848
78 Ga0105241_10366674 3300009174 Bacteria 1255
79 Ga0105242_10350028 3300009176 Unclassified 1364
80 Ga0105237_10000926 3300009545 Bacteria 39497
81 Ga0105237_10001868 3300009545 Bacteria 26867
82 Ga0105237_10007171 3300009545 Bacteria 12245
83 Ga0105237_10012924 3300009545 Bacteria 8772
84 Ga0105237_10035039 3300009545 Bacteria 5079
85 Ga0105237_10052939 3300009545 Bacteria 4072
86 Ga0105237_10090969 3300009545 Bacteria 3041
87 Ga0105238_10022961 3300009551 Bacteria 6359
88 Ga0105238_10048700 3300009551 Bacteria 4270
89 Ga0105238_10071475 3300009551 Unclassified 3467
90 Ga0105249_10004078 3300009553 Bacteria 12605
91 Ga0105249_10149836 3300009553 Bacteria 2245
92 Ga0105239_10000032 3300010375 Bacteria 225528
93 Ga0105239_10000430 3300010375 Bacteria 61162
94 Ga0105239_10000614 3300010375 Bacteria 50708
95 Ga0105239_10000735 3300010375 Bacteria 46540
96 Ga0105239_10003456 3300010375 Bacteria 19331
97 Ga0105239_10004338 3300010375 Bacteria 16991
98 Ga0105239_10019707 3300010375 Bacteria 7445
99 Ga0105239_10023598 3300010375 Bacteria 6773
100 Ga0105239_10033810 3300010375 Bacteria 5613
101 Ga0105239_10035579 3300010375 Bacteria 5468
102 Ga0105239_10139212 3300010375 Bacteria 2704
103 Ga0105246_10036735 3300011119 Bacteria 3284
104 Ga0105246_10298879 3300011119 Unclassified 1299
105 Ga0157369_10639130 3300013105 Bacteria 1098
106 Ga0157374_10000003 3300013296 Bacteria 854471
107 Ga0157374_10003062 3300013296 Bacteria 14023
108 Ga0157374_10018923 3300013296 Bacteria 6089
109 Ga0157374_10056925 3300013296 Bacteria 3651
110 Ga0157378_10063452 3300013297 Bacteria 3301
111 Ga0157378_10070031 3300013297 Bacteria 3148
112 Ga0157378_10213342 3300013297 Bacteria 1831
113 Ga0157378_10217109 3300013297 Bacteria 1816
114 Ga0163162_10000117 3300013306 Bacteria 70736
115 Ga0163162_10000203 3300013306 Bacteria 54901
116 Ga0163162_10000755 3300013306 Bacteria 30104
117 Ga0163162_10010860 3300013306 Bacteria 8864
118 Ga0157372_10010830 3300013307 Bacteria 9709
119 Ga0157372_10357913 3300013307 Bacteria 1700
120 Ga0157375_10165437 3300013308 Bacteria 2356
121 Ga0157375_10184006 3300013308 Bacteria 2242
122 Ga0163163_10016161 3300014325 Bacteria 6927
123 Ga0163163_10434855 3300014325 Bacteria 1371
124 Ga0157376_10000580 3300014969 Bacteria 23607
125 Ga0157376_10003458 3300014969 Bacteria 10882
126 Ga0157376_10261873 3300014969 Bacteria 1620
127 Ga0209437_100043 3300025233 Bacteria 440454
128 Ga0209646_1000050 3300025246 Bacteria 296599
129 Ga0209026_1000240 3300025250 Bacteria 71671
130 Ga0209673_1000016 3300025273 Bacteria 506202
131 Ga0209564_1002911 3300025295 Bacteria 12456
132 Ga0209758_1004339 3300025297 Bacteria 11884
133 Ga0209050_1021829 3300025298 Bacteria 2316
134 Ga0207426_1000925 3300025302 Bacteria 29342
135 Ga0209051_1006264 3300025303 Bacteria 6742
136 Ga0209257_1000008 3300025304 Bacteria 1294570
137 Ga0209257_1001535 3300025304 Bacteria 26927
138 Ga0207656_10038018 3300025321 Bacteria 2028
139 Ga0207642_10239947 3300025899 Bacteria 1023
140 Ga0207710_10006203 3300025900 Bacteria 5115
141 Ga0207680_10000018 3300025903 Bacteria 94318
142 Ga0207654_10003949 3300025911 Bacteria 7466
143 Ga0207654_10139012 3300025911 Bacteria 1547
144 Ga0207654_10244319 3300025911 Bacteria 1201
145 Ga0207695_10000027 3300025913 Bacteria 612456
146 Ga0207695_10000043 3300025913 Bacteria 444585
147 Ga0207695_10001743 3300025913 Bacteria 34552
148 Ga0207695_10003925 3300025913 Bacteria 20585
149 Ga0207695_10023624 3300025913 Bacteria 6937
150 Ga0207695_10027138 3300025913 Bacteria 6379
151 Ga0207695_10074753 3300025913 Bacteria 3449
152 Ga0207695_10290680 3300025913 Bacteria 1526
153 Ga0207695_10411973 3300025913 Bacteria 1236
154 Ga0207671_10001573 3300025914 Bacteria 26010
155 Ga0207671_10006721 3300025914 Bacteria 10185
156 Ga0207671_10015385 3300025914 Bacteria 5991
157 Ga0207671_10016784 3300025914 Bacteria 5676
158 Ga0207671_10026600 3300025914 Bacteria 4333
159 Ga0207671_10066794 3300025914 Bacteria 2677
160 Ga0207671_10078395 3300025914 Unclassified 2474
161 Ga0207687_10011799 3300025927 Bacteria 5715
162 Ga0207687_10225494 3300025927 Bacteria 1478
163 Ga0207686_10181129 3300025934 Unclassified 1494
164 Ga0207669_10111968 3300025937 Bacteria 1831
165 Ga0207704_10187912 3300025938 Bacteria 1500
166 Ga0207689_10005537 3300025942 Bacteria 11277
167 Ga0207689_10064510 3300025942 Unclassified 3013
168 Ga0207689_10129441 3300025942 Bacteria 2077
169 Ga0207661_10078090 3300025944 Bacteria 2724
170 Ga0207667_10013556 3300025949 Bacteria 9319
171 Ga0207667_10057281 3300025949 Bacteria 4091
172 Ga0207651_10212508 3300025960 Unclassified 1558
173 Ga0207640_10211847 3300025981 Bacteria 1477
174 Ga0207703_10008799 3300026035 Bacteria 7959
175 Ga0207639_10011752 3300026041 Bacteria 6089
176 Ga0207639_10035557 3300026041 Bacteria 3687
177 Ga0207639_10192489 3300026041 Bacteria 1743
178 Ga0207678_10202595 3300026067 Bacteria 1697
179 Ga0207702_10078968 3300026078 Bacteria 2850
180 Ga0207641_10000308 3300026088 Bacteria 60892
181 Ga0207648_10074944 3300026089 Bacteria 2950
182 Ga0207676_10044462 3300026095 Bacteria 3427
183 Ga0207674_10061408 3300026116 Bacteria 3797
184 Ga0207698_10006511 3300026142 Bacteria 7294
185 Ga0268264_10000080 3300028381 Bacteria 249126
186 Ga0268264_10002618 3300028381 Bacteria 15732
187 Ga0268264_10018715 3300028381 Bacteria 5663
188 Ga0307517_10020717 3300028786 Bacteria 8357
189 Ga0307515_10000021 3300028794 Bacteria 406008
190 Ga0307511_10000033 3300030521 Bacteria 104421
191 Ga0307511_10004085 3300030521 Bacteria 14916
192 Ga0265327_10000614 3300031251 Bacteria 58841
193 Ga0307513_10038292 3300031456 Bacteria 5325
194 Ga0307513_10046584 3300031456 Bacteria 4725
195 Ga0307513_10151593 3300031456 Bacteria 2226
196 Ga0307513_10154186 3300031456 Bacteria 2200
197 Ga0307509_10025168 3300031507 Bacteria 6651
198 Ga0307509_10036212 3300031507 Bacteria 5407
199 Ga0307408_100001852 3300031548 Bacteria 15415
200 Ga0307508_10228394 3300031616 Bacteria 1460
201 Ga0307516_10003200 3300031730 Bacteria 21277
202 Ga0307516_10007391 3300031730 Bacteria 12640
203 Ga0307516_10368351 3300031730 Bacteria 1100
204 Ga0307405_10305912 3300031731 Bacteria 1208
205 Ga0307412_10012270 3300031911 Bacteria 4989
206 Ga0307416_100047638 3300032002 Bacteria 3394
207 Ga0307416_100293615 3300032002 Bacteria 1611
208 Ga0307414_10035937 3300032004 Bacteria 3302
209 Ga0307415_100000247 3300032126 Bacteria 23410
210 Ga0307507_10006210 3300033179 Bacteria 18600
211 Ga0307510_10000732 3300033180 Bacteria 33696
212 Ga0307510_10000766 3300033180 Bacteria 33227
213 Ga0307510_10005782 3300033180 Bacteria 14743
214 Ga0373936_0014329 3300035113 Bacteria 3028
215 Ga0373946_0234822 3300035171 Bacteria 890
216 Ga0373935_0149599 3300035692 Bacteria 1583
217 Ga0373927_0053457 3300035695 Bacteria 2613
218 Ga0373947_0474613 3300035725 Bacteria 848
219 Ga0395899_0201205 3300037312 Bacteria 1389
220 Ga0395900_0019340 3300037418 Bacteria 6948
221 Ga0395900_0292473 3300037418 Bacteria 1617
222 Ga0439436_0015848 3300041404 Bacteria 2265
223 Ga0451800_1349056 3300041459 Bacteria 1377
224 Ga0451847_0108693 3300041503 Bacteria 1012
225 Ga0451853_1456290 3300041512 Bacteria 2761
226 Ga0439457_013055 3300042014 Bacteria 1867
227 Ga0466969_0000086 3300044656 Bacteria 48155
228 Ga0466969_0001839 3300044656 Bacteria 11340
229 Ga0466972_0000024 3300044658 Bacteria 187985
230 Ga0466972_0000047 3300044658 Bacteria 122901
231 Ga0466972_0055981 3300044658 Bacteria 1896
232 Ga0466966_0000047 3300044684 Bacteria 91962
233 Ga0466966_0000366 3300044684 Bacteria 29439
234 Ga0466964_0027864 3300044706 Bacteria 2221
235 Ga0466968_0066609 3300044735 Bacteria 1560
236 Ga0466970_0003592 3300044765 Bacteria 7562
237 Ga0466970_0277423 3300044765 Bacteria 942
238 Ga0466957_0002471 3300044842 Bacteria 9926
239 Ga0466959_0000053 3300045049 Bacteria 81055
240 Ga0466959_0000065 3300045049 Bacteria 73931
241 Ga0495638_0000026 3300046460 Bacteria 347061
242 Ga0495638_0010601 3300046460 Bacteria 6386
243 Ga0495638_0037259 3300046460 Unclassified 3094
244 Ga0495638_0243025 3300046460 Bacteria 996
245 Ga0495650_0000057 3300046471 Bacteria 303569
246 Ga0495650_0063761 3300046471 Bacteria 1468
247 Ga0495580_0073738 3300046472 Bacteria 2383
248 Ga0495662_0228347 3300046476 Bacteria 918
249 Ga0495583_0015257 3300046506 Bacteria 4187
250 Ga0495606_0000012 3300046507 Bacteria 294304
251 Ga0495606_0055842 3300046507 Bacteria 2552
252 Ga0495606_0096772 3300046507 Unclassified 1805
253 Ga0495610_0001237 3300046512 Bacteria 22946
254 Ga0495616_0002005 3300046513 Bacteria 13700
255 Ga0495616_0117039 3300046513 Bacteria 1233
256 Ga0495631_0005302 3300046518 Bacteria 6771
257 Ga0495631_0053330 3300046518 Bacteria 1765
258 Ga0495648_0007260 3300046524 Bacteria 8894
259 Ga0495648_0025946 3300046524 Bacteria 3956
260 Ga0495652_0151919 3300046529 Bacteria 1808
261 Ga0495609_0002310 3300046538 Bacteria 11796
262 Ga0495609_0008593 3300046538 Bacteria 4989
263 Ga0495622_0020325 3300046557 Bacteria 3092
264 Ga0495633_0006209 3300046558 Bacteria 7137
265 Ga0495668_0000011 3300046616 Bacteria 472186
266 Ga0495668_0002055 3300046616 Bacteria 17479
267 Ga0495611_0061283 3300046648 Unclassified 1710
268 Ga0495625_0000003 3300046660 Bacteria 686847
269 Ga0495625_0002698 3300046660 Bacteria 18870
270 Ga0495625_0033661 3300046660 Bacteria 3786
271 Ga0495625_0070929 3300046660 Bacteria 2446
272 Ga0495625_0109572 3300046660 Bacteria 1889
273 Ga0495635_0158763 3300046663 Bacteria 1539
274 Ga0495661_0001005 3300046665 Bacteria 25358
275 Ga0495661_0002119 3300046665 Bacteria 15559
276 Ga0495661_0015318 3300046665 Bacteria 5120
277 Ga0495658_0015138 3300046683 Bacteria 3954
278 Ga0495658_0022819 3300046683 Bacteria 3314
279 Ga0495649_0000002 3300046694 Bacteria 1093458
280 Ga0495649_0010960 3300046694 Bacteria 5340
281 Ga0495649_0028149 3300046694 Unclassified 3115
282 Ga0495660_0085054 3300046810 Bacteria 1653
283 Ga0495581_0143635 3300047315 Bacteria 1393
284 Ga0495674_0502584 3300047319 Bacteria 970
285 Ga0495683_0228116 3300047323 Unclassified 827
286 Ga0495687_000004 3300047443 Bacteria 779298
287 Ga0495677_0031548 3300047445 Bacteria 1929
288 Ga0495686_0000083 3300047472 Bacteria 198933
289 Ga0495686_0013274 3300047472 Bacteria 5720
290 Ga0495686_0097593 3300047472 Bacteria 1776
291 Ga0495614_0068586 3300048089 Bacteria 1527
292 Ga0496114_0000998 3300048917 Bacteria 21169
293 Ga0496126_0041898 3300048929 Bacteria 4233
294 nmdc:mga0k408_66996_c1 3300050493 Bacteria 2092
295 nmdc:mga08y16_337069_c1 3300050511 Bacteria 1550
296 Ga0495612_0001940 3300053078 Bacteria 8519
297 Ga0500635_0013741 3300053080 Bacteria 2358
298 Ga0500578_0000469 3300053086 Bacteria 49263
299 Ga0500578_0067908 3300053086 Bacteria 2273
300 Ga0500583_0000026 3300053092 Bacteria 110083
301 Ga0500583_0000126 3300053092 Bacteria 35190
302 Ga0500583_0000453 3300053092 Bacteria 12844
303 Ga0500583_0000654 3300053092 Bacteria 10244
304 Ga0500583_0010699 3300053092 Bacteria 3418
305 Ga0500650_0049854 3300053098 Bacteria 1944
306 Ga0500569_000465 3300053109 Bacteria 6673
307 Ga0500607_059393 3300053121 Bacteria 2010
308 Ga0500608_000318 3300053122 Bacteria 18520
309 Ga0500614_003967 3300053123 Bacteria 3158
310 Ga0500618_000010 3300053125 Bacteria 203909
311 Ga0500642_0118562 3300053130 Bacteria 1237
312 Ga0500658_0001307 3300053134 Bacteria 10079
313 Ga0500577_0099142 3300053142 Bacteria 1188
314 Ga0500616_0000004 3300053153 Bacteria 1002714
315 Ga0500616_0061022 3300053153 Bacteria 1953
316 Ga0500616_0064640 3300053153 Bacteria 1883
317 Ga0500622_0002268 3300053156 Bacteria 14121
318 Ga0500622_0008459 3300053156 Bacteria 5758
319 Ga0500622_0030212 3300053156 Bacteria 2846
320 Ga0500636_0103021 3300053177 Bacteria 1620
321 2738725823 2738541278 Bacteria 9755573
322 2884795037 2884791551 Bacteria 8511252
323 2929922527 2929921140 Bacteria 8649150
324 Ga0068853_100004531
325 JGI25162J39368_1000005
326 JGI25154J39366_1000021
327 JGI25157J39369_1004333
328 JGI25153J46596_10047822
329 rootH1_10055678
330 rootH2_10034584
331 rootH2_10114349
332 rootH2_10167192
333 rootL2_10002261
334 rootL2_10056420
335 rootL2_10102431
336 rootL2_10117106
337 rootL2_10249900
338 rootH1_10009456
339 rootH1_10026982
340 rootH1_10068307
341 rootH1_10096805
342 rootH1_10116592
343 JGI25160J50197_1000453
344 Ga0055526_1014726
345 Ga0055528_1000198
346 Ga0055530_10017078
347 Ga0055531_10000225
348 Ga0055543_1010281
349 Ga0065165_1000182
350 Ga0070683_100087114
351 Ga0068869_100025715
352 Ga0068869_100160077
353 Ga0070666_10000044
354 Ga0070666_10086960
355 Ga0070666_10171986
356 Ga0068868_100413332
357 Ga0070673_100236807
358 Ga0070667_100104295
359 Ga0068867_100530695
360 Ga0070698_100097011
361 Ga0068853_100031849
362 Ga0068853_100272340
363 Ga0068855_100002223
364 Ga0068856_100019518
365 Ga0068852_100017647
366 Ga0068859_100000060
367 Ga0068864_100004208
368 Ga0068864_100031896
369 Ga0068866_10077851
370 Ga0068851_10020041
371 Ga0068863_100007997
372 Ga0068860_100000039
373 Ga0068860_100003709
374 Ga0068860_100016827
375 Ga0068860_100548057
376 Ga0081540_1006890
377 Ga0070717_10375798
378 Ga0075366_10208576
379 Ga0097621_100009751
380 Ga0097621_100202120
381 Ga0097621_100388044
382 Ga0068871_100007233
383 Ga0068871_100331927
384 Ga0097620_100000060
385 Ga0105240_10000155
386 Ga0105240_10001228
387 Ga0105240_10001605
388 Ga0105240_10010113
389 Ga0105240_10127993
390 Ga0105240_10131596
391 Ga0105240_10244045
392 Ga0105240_10244552
393 Ga0105245_10019277
394 Ga0105245_10228309
395 Ga0105247_10006269
396 Ga0105243_10191931
397 Ga0105241_10003854
398 Ga0105241_10046537
399 Ga0105241_10160371
400 Ga0105241_10366674
401 Ga0105242_10350028
402 Ga0105237_10000926
403 Ga0105237_10001868
404 Ga0105237_10007171
405 Ga0105237_10012924
406 Ga0105237_10035039
407 Ga0105237_10052939
408 Ga0105237_10090969
409 Ga0105238_10022961
410 Ga0105238_10048700
411 Ga0105238_10071475
412 Ga0105249_10004078
413 Ga0105249_10149836
414 Ga0105239_10000032
415 Ga0105239_10000430
416 Ga0105239_10000614
417 Ga0105239_10000735
418 Ga0105239_10003456
419 Ga0105239_10004338
420 Ga0105239_10019707
421 Ga0105239_10023598
422 Ga0105239_10033810
423 Ga0105239_10035579
424 Ga0105239_10139212
425 Ga0105246_10036735
426 Ga0105246_10298879
427 Ga0157369_10639130
428 Ga0157374_10000003
429 Ga0157374_10003062
430 Ga0157374_10018923
431 Ga0157374_10056925
432 Ga0157378_10063452
433 Ga0157378_10070031
434 Ga0157378_10213342
435 Ga0157378_10217109
436 Ga0163162_10000117
437 Ga0163162_10000203
438 Ga0163162_10000755
439 Ga0163162_10010860
440 Ga0157372_10010830
441 Ga0157372_10357913
442 Ga0157375_10165437
443 Ga0157375_10184006
444 Ga0163163_10016161
445 Ga0163163_10434855
446 Ga0157376_10000580
447 Ga0157376_10003458
448 Ga0157376_10261873
449 Ga0209437_100043
450 Ga0209646_1000050
451 Ga0209026_1000240
452 Ga0209673_1000016
453 Ga0209564_1002911
454 Ga0209758_1004339
455 Ga0209050_1021829
456 Ga0207426_1000925
457 Ga0209051_1006264
458 Ga0209257_1000008
459 Ga0209257_1001535
460 Ga0207656_10038018
461 Ga0207642_10239947
462 Ga0207710_10006203
463 Ga0207680_10000018
464 Ga0207654_10003949
465 Ga0207654_10139012
466 Ga0207654_10244319
467 Ga0207695_10000027
468 Ga0207695_10000043
469 Ga0207695_10001743
470 Ga0207695_10003925
471 Ga0207695_10023624
472 Ga0207695_10027138
473 Ga0207695_10074753
474 Ga0207695_10290680
475 Ga0207695_10411973
476 Ga0207671_10001573
477 Ga0207671_10006721
478 Ga0207671_10015385
479 Ga0207671_10016784
480 Ga0207671_10026600
481 Ga0207671_10066794
482 Ga0207671_10078395
483 Ga0207687_10011799
484 Ga0207687_10225494
485 Ga0207686_10181129
486 Ga0207669_10111968
487 Ga0207704_10187912
488 Ga0207689_10005537
489 Ga0207689_10064510
490 Ga0207689_10129441
491 Ga0207661_10078090
492 Ga0207667_10013556
493 Ga0207667_10057281
494 Ga0207651_10212508
495 Ga0207640_10211847
496 Ga0207703_10008799
497 Ga0207639_10011752
498 Ga0207639_10035557
499 Ga0207639_10192489
500 Ga0207678_10202595
501 Ga0207702_10078968
502 Ga0207641_10000308
503 Ga0207648_10074944
504 Ga0207676_10044462
505 Ga0207674_10061408
506 Ga0207698_10006511
507 Ga0268264_10000080
508 Ga0268264_10002618
509 Ga0268264_10018715
510 Ga0307517_10020717
511 Ga0307515_10000021
512 Ga0307511_10000033
513 Ga0307511_10004085
514 Ga0265327_10000614
515 Ga0307513_10038292
516 Ga0307513_10046584
517 Ga0307513_10151593
518 Ga0307513_10154186
519 Ga0307509_10025168
520 Ga0307509_10036212
521 Ga0307408_100001852
522 Ga0307508_10228394
523 Ga0307516_10003200
524 Ga0307516_10007391
525 Ga0307516_10368351
526 Ga0307405_10305912
527 Ga0307412_10012270
528 Ga0307416_100047638
529 Ga0307416_100293615
530 Ga0307414_10035937
531 Ga0307415_100000247
532 Ga0307507_10006210
533 Ga0307510_10000732
534 Ga0307510_10000766
535 Ga0307510_10005782
536 Ga0373936_0014329
537 Ga0373946_0234822
538 Ga0373935_0149599
539 Ga0373927_0053457
540 Ga0373947_0474613
541 Ga0395899_0201205
542 Ga0395900_0019340
543 Ga0395900_0292473
544 Ga0439436_0015848
545 Ga0451800_1349056
546 Ga0451847_0108693
547 Ga0451853_1456290
548 Ga0439457_013055
549 Ga0466969_0000086
550 Ga0466969_0001839
551 Ga0466972_0000024
552 Ga0466972_0000047
553 Ga0466972_0055981
554 Ga0466966_0000047
555 Ga0466966_0000366
556 Ga0466964_0027864
557 Ga0466968_0066609
558 Ga0466970_0003592
559 Ga0466970_0277423
560 Ga0466957_0002471
561 Ga0466959_0000053
562 Ga0466959_0000065
563 Ga0495638_0000026
564 Ga0495638_0010601
565 Ga0495638_0037259
566 Ga0495638_0243025
567 Ga0495650_0000057
568 Ga0495650_0063761
569 Ga0495580_0073738
570 Ga0495662_0228347
571 Ga0495583_0015257
572 Ga0495606_0000012
573 Ga0495606_0055842
574 Ga0495606_0096772
575 Ga0495610_0001237
576 Ga0495616_0002005
577 Ga0495616_0117039
578 Ga0495631_0005302
579 Ga0495631_0053330
580 Ga0495648_0007260
581 Ga0495648_0025946
582 Ga0495652_0151919
583 Ga0495609_0002310
584 Ga0495609_0008593
585 Ga0495622_0020325
586 Ga0495633_0006209
587 Ga0495668_0000011
588 Ga0495668_0002055
589 Ga0495611_0061283
590 Ga0495625_0000003
591 Ga0495625_0002698
592 Ga0495625_0033661
593 Ga0495625_0070929
594 Ga0495625_0109572
595 Ga0495635_0158763
596 Ga0495661_0001005
597 Ga0495661_0002119
598 Ga0495661_0015318
599 Ga0495658_0015138
600 Ga0495658_0022819
601 Ga0495649_0000002
602 Ga0495649_0010960
603 Ga0495649_0028149
604 Ga0495660_0085054
605 Ga0495581_0143635
606 Ga0495674_0502584
607 Ga0495683_0228116
608 Ga0495687_000004
609 Ga0495677_0031548
610 Ga0495686_0000083
611 Ga0495686_0013274
612 Ga0495686_0097593
613 Ga0495614_0068586
614 Ga0496114_0000998
615 Ga0496126_0041898
616 nmdc:mga0k408_66996_c1
617 nmdc:mga08y16_337069_c1
618 Ga0495612_0001940
619 Ga0500635_0013741
620 Ga0500578_0000469
621 Ga0500578_0067908
622 Ga0500583_0000026
623 Ga0500583_0000126
624 Ga0500583_0000453
625 Ga0500583_0000654
626 Ga0500583_0010699
627 Ga0500650_0049854
628 Ga0500569_000465
629 Ga0500607_059393
630 Ga0500608_000318
631 Ga0500614_003967
632 Ga0500618_000010
633 Ga0500642_0118562
634 Ga0500658_0001307
635 Ga0500577_0099142
636 Ga0500616_0000004
637 Ga0500616_0061022
638 Ga0500616_0064640
639 Ga0500622_0002268
640 Ga0500622_0008459
641 Ga0500622_0030212
642 Ga0500636_0103021
643 2738725823
644 2884795037
645 2929922527

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

5

196

0.96

PF08659

KR

KR domain

6

177

0.86

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

11

241

0.82

PF23441

1

232

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3m1a-assembly6.cif.gz_J the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9412 5 277
3m1a-assembly4.cif.gz_E the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9387 5 278
3m1a-assembly2.cif.gz_B the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9381 5 278
3m1a-assembly6.cif.gz_J the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9344 5 277
3m1a-assembly1.cif.gz_G the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.934 2 277
ID Description Score Start End Superfamily
af_Q54WM6_4_292_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9724 5 280 3.40.50.720
af_Q75JD9_6_304_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9635 2 281 3.40.50.720
af_Q75JD9_6_304_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9535 2 281 3.40.50.720
af_Q54HW7_18_312_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9519 1 281 3.40.50.720
af_Q54WA9_4_295_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9508 5 279 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Q5SBG4-F1-model_v4 SDR family oxidoreductase 0.9752 1 209 GO:0016491
AF-A0A381H111-F1-model_v4 deleted 0.9722 62 183
AF-A0A529HNC3-F1-model_v4 SDR family oxidoreductase 0.9716 58 191 GO:0016491
AF-V7D3L8-F1-model_v4 Short-chain dehydrogenase 0.9703 5 230 GO:0016491
AF-X1DT56-F1-model_v4 Uncharacterized protein 0.9697 87 184 GO:0016491

Map