F406236

General Info

Members Datasets Scaffolds Average Seq Length
321 242 642 868

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2990044586|2990046516
Length 934
Sequence HPNHISPLRASPPGLLSGTGIPADLPGGAGVLTGDRRAVGGAGKLVRRVSVGRSRLTAVTENTQPPADGPHSAPADLPTQYTPADVEGKLYERWVDRGYFEADAASDKEPYTIVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNRVERELAGEGKSRHDLGREAFVERVWQWKAESGGTISGQMRRLGDGVAWSRERFTMDEGLSRAVNTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVEYQDDDGELVSIRYGEGEDSLVVATTRAETMLGDTAVAVHPDDERYRHLVGREIRLPLTDRSIPVVADPHVDPDFGTGAVKVTPAHDPNDFEIGRRHGLPQLTVMDEHAVITAPGPFQGLDRLEARSAIVGALREEGRVVAEKRPYQHSVGHCSRCHTTVEPRLSMQWWVRVGPLAEAAGDAVRDGRVAIHPKEMSSRYFEWVDNLHDWCISRQLWWGHRIPVWYGPDGEIRCVGPDEEPPSGPGWHQDTDVLDTWFSSGLWPFSTLGWPDATESVEKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGVPPFHTIALHGMVRDQFGKKMSKSFGNAVDPLDWMDAYGSDAVRFTLARGANPGVDVPIGEDWVQASRNFANKVWNATRFALLNGATVEGPLPAADELSATDRWVLSRLNSVVAEVDAYYDDYQFAKLSDALFHFAWDEVFDWYVELSKTTFAAGGRPAEVARRVLGEVLDVTLRLLHPLVPFVTEELWTTLTGGDSVVIADWPTDSGFRDAAAERELDAVRQLVTEVRRFRADQGLQPGQRVPATLDLGETGLAAHEPAMRSLLRLEPAGEAFSATASLPAAGAVVALDLSGAIDFAAERKRLAKDLAAAEKELAGTTAKLGNEAFLAKAPEPVVAKIRARRESAEADIARITEQLAKLPG

Samples

Sample ID Description Type Environment
1 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
2 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
3 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
5 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
7 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
8 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
9 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
10 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
11 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
12 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
13 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
14 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
15 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
18 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
19 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
20 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
21 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
22 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
23 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
24 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
25 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
26 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
27 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
28 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
29 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
30 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
31 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
32 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
33 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
34 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
35 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
36 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
37 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
38 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
39 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
40 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
41 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
42 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
43 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
44 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
45 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
46 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
47 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
48 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
49 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
50 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
51 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
52 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
53 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
54 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
55 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
56 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
57 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
58 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
59 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
60 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
64 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
65 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
66 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
67 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
68 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
69 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
70 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
71 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
72 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
73 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
74 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
75 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
76 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
77 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
78 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
79 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
80 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
81 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
82 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
83 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
84 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
85 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
88 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
89 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
90 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
91 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
92 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
93 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
96 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
97 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
98 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
119 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
120 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
121 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
122 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
123 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
124 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
125 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
126 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
129 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
131 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
132 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
133 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
134 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
135 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
136 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
137 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
138 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
139 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
140 2643221548 Streptomyces sp. Root55 Isolate Unclassified
141 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
142 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
143 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
144 2643221647 Streptomyces sp. Root369 Isolate Unclassified
145 2643221670 Streptomyces sp. Root431 Isolate Unclassified
146 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
147 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
148 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
149 2643221714 Streptomyces sp. Root264 Isolate Unclassified
150 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
151 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
152 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
153 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
154 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
155 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
156 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
157 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
158 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
159 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
160 2808606448 Streptomyces sp. 193411 Isolate Unclassified
161 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
162 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
163 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
164 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
165 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
166 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
167 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
168 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
169 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
170 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
171 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
172 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
173 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
174 2862574272 Streptomyces sp. AcE210 Isolate Nodule
175 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
176 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
177 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
178 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
179 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
180 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
181 2867369537 Streptomyces sp. Z26 Isolate Unclassified
182 2867428634 Streptomyces sp. RP5T Isolate Unclassified
183 2867475112 Streptomyces sp. TM32 Isolate Unclassified
184 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
185 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
186 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
187 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
188 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
189 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
190 2891562705 Microbispora tritici MT50 Isolate Unclassified
191 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
192 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
193 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
194 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
195 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
196 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
197 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
198 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
199 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
200 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
201 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
202 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
203 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
204 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
205 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
206 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
207 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
208 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
209 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
210 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
211 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
212 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
213 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
214 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
215 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
216 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
217 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
218 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
219 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
220 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
221 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
222 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
223 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
224 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
225 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
226 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
227 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
228 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
229 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
230 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
231 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
232 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
233 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
234 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
235 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
236 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
237 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
238 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
239 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
240 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
241 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
242 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 64.8
Metatranscriptomes 0.31
Isolates 34.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.43
Nodule 0.93
Rhizoplane 1.25
Rhizosphere 72.59
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070667_100006107 3300005367 Bacteria 10004
2 Ga0068859_100008523 3300005617 Bacteria 10373
3 Ga0081455_10009622 3300005937 Bacteria 9926
4 Ga0081540_1006340 3300005983 Bacteria 8641
5 Ga0081539_10001179 3300005985 Bacteria 47264
6 Ga0075367_10000916 3300006178 Bacteria 11912
7 Ga0097620_100008523 3300006931 Bacteria 10373
8 Ga0105247_10002037 3300009101 Bacteria 14001
9 Ga0157369_10007207 3300013105 Bacteria 12815
10 Ga0182008_10002208 3300014497 Bacteria 12349
11 Ga0182008_10003638 3300014497 Bacteria 9202
12 Ga0182007_10001114 3300015262 Bacteria 14564
13 Ga0182007_10005481 3300015262 Bacteria 5569
14 Ga0183367_1006 3300015688 Bacteria 648044
15 Ga0213875_10013724 3300021388 Bacteria 3969
16 Ga0224712_10003511 3300022467 Bacteria 4088
17 Ga0207710_10019234 3300025900 Bacteria 2913
18 Ga0207664_10004174 3300025929 Bacteria 9756
19 Ga0307515_10002026 3300028794 Bacteria 44830
20 Ga0307515_10002392 3300028794 Bacteria 40929
21 Ga0307515_10047479 3300028794 Bacteria 6524
22 Ga0307512_10020229 3300030522 Bacteria 6032
23 Ga0265340_10001372 3300031247 Bacteria 13958
24 Ga0307513_10001613 3300031456 Bacteria 32387
25 Ga0307513_10003236 3300031456 Bacteria 22206
26 Ga0307513_10104538 3300031456 Bacteria 2845
27 Ga0307509_10032749 3300031507 Bacteria 5726
28 Ga0307508_10002528 3300031616 Bacteria 19268
29 Ga0307508_10030412 3300031616 Bacteria 4881
30 Ga0316579_10000182 3300031691 Bacteria 18191
31 Ga0316576_10010499 3300031727 Bacteria 6021
32 Ga0307516_10017205 3300031730 Bacteria 7546
33 Ga0307507_10000001 3300033179 Bacteria 417520
34 Ga0307507_10018449 3300033179 Bacteria 7930
35 Ga0307507_10026478 3300033179 Bacteria 6251
36 Ga0373953_0004008 3300035117 Bacteria 4650
37 Ga0373955_0003303 3300035172 Bacteria 7078
38 Ga0373933_0016143 3300035724 Bacteria 4172
39 Ga0395900_0045299 3300037418 Bacteria 4531
40 Ga0436364_1450416 3300037853 Bacteria 7210
41 Ga0451853_2542224 3300041512 Bacteria 5131
42 Ga0439457_000074 3300042014 Bacteria 22043
43 Ga0450894_000102 3300042131 Bacteria 14302
44 Ga0450896_000401 3300042133 Bacteria 4366
45 Ga0450898_001132 3300042134 Bacteria 3417
46 Ga0450899_000098 3300042135 Bacteria 7563
47 Ga0450903_000064 3300042138 Bacteria 21230
48 Ga0450906_001062 3300042145 Bacteria 6050
49 Ga0450908_003442 3300042184 Bacteria 3074
50 Ga0466969_0004392 3300044656 Bacteria 7500
51 Ga0466972_0004247 3300044658 Bacteria 7161
52 Ga0466966_0003602 3300044684 Bacteria 10217
53 Ga0466961_0001036 3300044693 Bacteria 17160
54 Ga0466961_0001173 3300044693 Bacteria 16122
55 Ga0466961_0014443 3300044693 Bacteria 5070
56 Ga0466961_0016604 3300044693 Bacteria 4734
57 Ga0466963_0002051 3300044694 Bacteria 11102
58 Ga0466963_0011375 3300044694 Bacteria 5417
59 Ga0466971_0000232 3300044719 Bacteria 21256
60 Ga0466970_0000648 3300044765 Bacteria 17136
61 Ga0466957_0000456 3300044842 Bacteria 20238
62 Ga0466959_0007880 3300045049 Bacteria 7497
63 Ga0466959_0017533 3300045049 Bacteria 5249
64 Ga0466959_0024649 3300045049 Bacteria 4457
65 Ga0466958_0012526 3300045836 Bacteria 4808
66 Ga0466958_0019829 3300045836 Bacteria 3916
67 Ga0495592_0022594 3300046454 Bacteria 4785
68 Ga0495592_0036560 3300046454 Bacteria 3698
69 Ga0495603_0003743 3300046455 Bacteria 9044
70 Ga0495603_0005800 3300046455 Bacteria 7389
71 Ga0495603_0012120 3300046455 Bacteria 5221
72 Ga0495603_0018336 3300046455 Bacteria 4233
73 Ga0495629_0001256 3300046459 Bacteria 19914
74 Ga0495629_0011004 3300046459 Bacteria 6570
75 Ga0495651_0000312 3300046462 Bacteria 37833
76 Ga0495651_0000488 3300046462 Bacteria 30600
77 Ga0495651_0002187 3300046462 Bacteria 15103
78 Ga0495651_0004577 3300046462 Bacteria 10572
79 Ga0495651_0011170 3300046462 Bacteria 6905
80 Ga0495651_0033860 3300046462 Bacteria 3983
81 Ga0495653_0003422 3300046463 Bacteria 12760
82 Ga0495605_0001675 3300046474 Bacteria 14245
83 Ga0495664_0006827 3300046477 Bacteria 6317
84 Ga0495594_0003225 3300046499 Bacteria 8452
85 Ga0495594_0008208 3300046499 Bacteria 5373
86 Ga0495607_0028712 3300046501 Bacteria 3428
87 Ga0495606_0001850 3300046507 Bacteria 26642
88 Ga0495618_0018701 3300046514 Bacteria 4256
89 Ga0495628_0012492 3300046516 Bacteria 7158
90 Ga0495628_0020501 3300046516 Bacteria 5450
91 Ga0495643_0004147 3300046522 Bacteria 10296
92 Ga0495652_0009130 3300046529 Bacteria 9016
93 Ga0495652_0009378 3300046529 Bacteria 8899
94 Ga0495652_0048497 3300046529 Bacteria 3639
95 Ga0495665_0000429 3300046531 Bacteria 21413
96 Ga0495640_0044465 3300046533 Bacteria 3087
97 Ga0495640_0048787 3300046533 Bacteria 2923
98 Ga0495587_0000411 3300046536 Bacteria 30310
99 Ga0495587_0000928 3300046536 Bacteria 19291
100 Ga0495633_0026371 3300046558 Bacteria 2852
101 Ga0495667_0000285 3300046559 Bacteria 32853
102 Ga0495667_0029604 3300046559 Bacteria 3686
103 Ga0495634_0000292 3300046642 Bacteria 47902
104 Ga0495634_0001068 3300046642 Bacteria 25638
105 Ga0495634_0006662 3300046642 Bacteria 8759
106 Ga0495625_0004464 3300046660 Bacteria 13220
107 Ga0495635_0010587 3300046663 Bacteria 6455
108 Ga0495635_0022351 3300046663 Bacteria 4403
109 Ga0495661_0054933 3300046665 Bacteria 2389
110 Ga0495588_0000506 3300046674 Bacteria 18909
111 Ga0495588_0014216 3300046674 Bacteria 3807
112 Ga0495657_0017724 3300046675 Bacteria 5166
113 Ga0495657_0021138 3300046675 Bacteria 4671
114 Ga0495657_0024778 3300046675 Bacteria 4267
115 Ga0495623_0000355 3300046679 Bacteria 30224
116 Ga0495623_0006120 3300046679 Bacteria 7827
117 Ga0495646_0007086 3300046680 Bacteria 7121
118 Ga0495658_0018738 3300046683 Bacteria 3603
119 Ga0495613_0000533 3300046689 Bacteria 31681
120 Ga0495613_0000580 3300046689 Bacteria 29587
121 Ga0495613_0004244 3300046689 Bacteria 10738
122 Ga0495613_0049712 3300046689 Bacteria 3093
123 Ga0495670_0001523 3300046691 Bacteria 11318
124 Ga0495589_0005801 3300046794 Bacteria 6512
125 Ga0495600_0000180 3300046809 Bacteria 37122
126 Ga0495604_0000064 3300047317 Bacteria 91932
127 Ga0495604_0000383 3300047317 Bacteria 40010
128 Ga0495604_0004155 3300047317 Bacteria 11493
129 Ga0495604_0007982 3300047317 Bacteria 8383
130 Ga0495604_0009055 3300047317 Bacteria 7876
131 Ga0495604_0013396 3300047317 Bacteria 6531
132 Ga0495636_0001739 3300047318 Bacteria 8304
133 Ga0495636_0002676 3300047318 Bacteria 6879
134 Ga0495676_0004789 3300047321 Bacteria 12393
135 Ga0495676_0009563 3300047321 Bacteria 8822
136 Ga0495676_0013669 3300047321 Bacteria 7284
137 Ga0495676_0027308 3300047321 Bacteria 4896
138 Ga0495680_0005653 3300047322 Bacteria 11711
139 Ga0495680_0013315 3300047322 Bacteria 7181
140 Ga0495687_003257 3300047443 Bacteria 11978
141 Ga0495687_007385 3300047443 Bacteria 6478
142 Ga0495675_0001515 3300047444 Bacteria 14040
143 Ga0495675_0002803 3300047444 Bacteria 10459
144 Ga0495685_000208 3300047447 Bacteria 19755
145 Ga0495681_0001401 3300047470 Bacteria 18150
146 Ga0495684_0005333 3300047471 Bacteria 10008
147 Ga0495593_0022028 3300047673 Bacteria 3555
148 Ga0495614_0010942 3300048089 Bacteria 3993
149 Ga0495614_0012168 3300048089 Bacteria 3777
150 Ga0496102_0000142 3300048905 Bacteria 97037
151 Ga0496102_0012658 3300048905 Bacteria 7306
152 Ga0496103_0000085 3300048906 Bacteria 105412
153 Ga0496118_0014983 3300048921 Bacteria 7213
154 Ga0496121_0033730 3300048924 Bacteria 4626
155 Ga0496126_0000026 3300048929 Bacteria 422310
156 Ga0501031_0000642 3300049568 Bacteria 20719
157 Ga0501032_0002633 3300049569 Bacteria 14011
158 Ga0501033_0028344 3300049570 Bacteria 4207
159 Ga0501034_0019611 3300049571 Bacteria 6915
160 Ga0501034_0021011 3300049571 Bacteria 6663
161 Ga0501034_0026902 3300049571 Bacteria 5853
162 Ga0501034_0028320 3300049571 Bacteria 5699
163 Ga0501034_0059959 3300049571 Bacteria 3822
164 Ga0501036_0000809 3300049572 Bacteria 23223
165 Ga0501036_0023964 3300049572 Bacteria 5144
166 Ga0501036_0050061 3300049572 Bacteria 3538
167 Ga0501037_0000644 3300049573 Bacteria 26982
168 Ga0501037_0003992 3300049573 Bacteria 10698
169 Ga0501038_0004611 3300049574 Bacteria 12820
170 Ga0501038_0034824 3300049574 Bacteria 4425
171 Ga0501039_0005182 3300049575 Bacteria 9869
172 Ga0501041_0025025 3300049577 Bacteria 3586
173 Ga0501043_0003346 3300049579 Bacteria 13205
174 Ga0501043_0023561 3300049579 Bacteria 4827
175 Ga0501043_0037646 3300049579 Bacteria 3804
176 Ga0501046_0003711 3300049580 Bacteria 13975
177 Ga0501047_0000025 3300049581 Bacteria 225560
178 Ga0501047_0001101 3300049581 Bacteria 26872
179 Ga0501047_0002463 3300049581 Bacteria 17654
180 Ga0501047_0085767 3300049581 Bacteria 3025
181 Ga0501048_0018521 3300049582 Bacteria 5118
182 Ga0501068_0000363 3300049584 Bacteria 22760
183 Ga0501070_0006770 3300049586 Bacteria 9755
184 Ga0501071_0000362 3300049587 Bacteria 22312
185 Ga0501072_0000272 3300049588 Bacteria 37385
186 Ga0501074_0000332 3300049590 Bacteria 27474
187 Ga0501074_0033144 3300049590 Bacteria 3743
188 Ga0501035_0003482 3300049822 Bacteria 15060
189 Ga0501035_0004088 3300049822 Bacteria 13869
190 Ga0501035_0006265 3300049822 Bacteria 11187
191 Ga0501044_0004754 3300049823 Bacteria 15188
192 Ga0501044_0007826 3300049823 Bacteria 11745
193 nmdc:mga06z11_10276_c1 3300050494 Bacteria 3980
194 Ga0495655_0004449 3300053083 Bacteria 2395
195 Ga0495619_0014215 3300053085 Bacteria 5028
196 Ga0500578_0019664 3300053086 Bacteria 4335
197 Ga0500644_0006008 3300053088 Bacteria 3092
198 Ga0500628_002565 3300053129 Bacteria 2996
199 Ga0500652_000767 3300053131 Bacteria 10845
200 Ga0500658_0003671 3300053134 Bacteria 5788
201 Ga0500616_0000322 3300053153 Bacteria 68577
202 Ga0500616_0002786 3300053153 Bacteria 14082
203 Ga0500616_0007205 3300053153 Bacteria 7110
204 Ga0500634_0020732 3300053161 Bacteria 3557
205 Ga0501084_0001078 3300054114 Bacteria 21240
206 Ga0501082_0001405 3300060353 Bacteria 21188
207 Ga0466962_0004983 3300061719 Bacteria 6387
208 Ga0466962_0012448 3300061719 Bacteria 4089
209 Ga0530510_0040938 3300061734 Bacteria 3345
210 2990046516 2990044586 Bacteria 6603797
211 2547406848 2547132111 Bacteria 8013147
212 2554258573 2554235005 Bacteria 6457341
213 2585304825 2582581313 Bacteria 10042643
214 2585319461 2582581314 Bacteria 11452267
215 2616700743 2616644814 Bacteria 11555299
216 2616899893 2616644941 Bacteria 8510691
217 2643759766 2643221548 Bacteria 8053412
218 2643944671 2643221587 Bacteria 7586415
219 2644018679 2643221601 Bacteria 7493239
220 2644179814 2643221631 Bacteria 8168043
221 2644269266 2643221647 Bacteria 10741251
222 2644385406 2643221670 Bacteria 6497041
223 2644431569 2643221677 Bacteria 7584031
224 2644436394 2643221678 Bacteria 9540101
225 2644462815 2643221682 Bacteria 6743283
226 2644625754 2643221714 Bacteria 9015452
227 2768646036 2767802112 Bacteria 6465194
228 2776373930 2775506925 Bacteria 7237746
229 2784587875 2784132148 Bacteria 8627943
230 2785344271 2784746763 Bacteria 9783172
231 2785368598 2784746768 Bacteria 10036182
232 2786669702 2786546132 Bacteria 10419719
233 2793976139 2791355406 Bacteria 11364898
234 2804844890 2802429296 Bacteria 7227771
235 2808841282 2808606359 Bacteria 9866990
236 2808919790 2808606375 Bacteria 9466072
237 2809231462 2808606448 Bacteria 8656184
238 2811848285 2808606982 Bacteria 7791042
239 2812358976 2811994879 Bacteria 9313447
240 2812481222 2811994917 Bacteria 7761064
241 2819693664 2818991463 Bacteria 7948711
242 2819742840 2818991472 Bacteria 10089953
243 2837272090 2837268691 Bacteria 7850704
244 2852642216 2852635781 Bacteria 8251373
245 2856741421 2856741275 Bacteria 8096094
246 2862184886 2862178590 Bacteria 8583590
247 2862288136 2862281513 Bacteria 9621493
248 2862295664 2862290372 Bacteria 7471434
249 2862392580 2862382967 Bacteria 10317375
250 2862509498 2862507626 Bacteria 9425308
251 2862579991 2862574272 Bacteria 10567477
252 2862711026 2862705112 Bacteria 6563286
253 2863068547 2863067949 Bacteria 8541735
254 2863405524 2863404153 Bacteria 9672205
255 2866556117 2866552031 Bacteria 5824618
256 2866614046 2866612099 Bacteria 7543886
257 2867348143 2867346516 Bacteria 7608576
258 2867371104 2867369537 Bacteria 6501581
259 2867431085 2867428634 Bacteria 9590268
260 2867479678 2867475112 Bacteria 6909112
261 2868093042 2868088558 Bacteria 7609351
262 2873156551 2873151551 Bacteria 8625867
263 2875393802 2875391855 Bacteria 7600475
264 2877681930 2877676314 Bacteria 9512378
265 2891396391 2891395885 Bacteria 9251614
266 2891557925 2891554331 Bacteria 8812224
267 2891567741 2891562705 Bacteria 8039471
268 2899362909 2899359706 Bacteria 10940472
269 2912720898 2912715099 Bacteria 9460473
270 2912725011 2912723979 Bacteria 8557534
271 2912759937 2912757875 Bacteria 7940295
272 2918503833 2918501144 Bacteria 8668083
273 2919468682 2919468124 Bacteria 9133025
274 2935392287 2935390628 Bacteria 7043367
275 2946066901 2946064051 Bacteria 8957905
276 2946075229 2946072368 Bacteria 8999607
277 2947230333 2947224130 Bacteria 9938529
278 2954003644 2954002825 Bacteria 9173742
279 2954387053 2954380949 Bacteria 10050426
280 2954676110 2954673503 Bacteria 9685905
281 2954677707 2954673503 Bacteria 9685905
282 2954686447 2954682443 Bacteria 9862841
283 2954688057 2954682443 Bacteria 9862841
284 2954697889 2954691527 Bacteria 10720516
285 2954704327 2954701450 Bacteria 10834262
286 2954717000 2954711539 Bacteria 10867210
287 2954726951 2954721474 Bacteria 10456478
288 2954734846 2954731030 Bacteria 10243860
289 2954745872 2954740390 Bacteria 10229294
290 2954753718 2954749733 Bacteria 10366972
291 2954764845 2954759201 Bacteria 9358192
292 2966603276 2966598605 Bacteria 7676064
293 2990061886 2990059506 Bacteria 9321252
294 2990093396 2990088156 Bacteria 6657676
295 2995471126 2995463766 Bacteria 8577691
296 2997456558 2997451912 Bacteria 8492419
297 2997608159 2997600082 Bacteria 9896405
298 3006321820 3006321560 Bacteria 8247479
299 3006399650 3006393351 Bacteria 6615579
300 3006427305 3006425503 Bacteria 6491253
301 3006488639 3006486233 Bacteria 8157040
302 3006501781 3006493962 Bacteria 8825450
303 8008488826 8008485437 Bacteria 7198341
304 8008559549 8008558824 Bacteria 10610750
305 8008579603 8008574985 Bacteria 7815457
306 8023629280 8023623736 Bacteria 8593882
307 8025419328 8025413630 Bacteria 7014048
308 8025481434 8025478263 Bacteria 8209203
309 8025528309 8025524527 Bacteria 7197316
310 8025536988 8025530807 Bacteria 8495698
311 8033686006 8033684223 Bacteria 6906479
312 8047898940 8047893842 Bacteria 11723082
313 8048127697 8048127548 Bacteria 11053136
314 8048359979 8048356638 Bacteria 11044339
315 8048375898 8048369669 Bacteria 11666822
316 8048382309 8048379754 Bacteria 11877923
317 8048408382 8048406513 Bacteria 8936924
318 8053950183 8053945823 Bacteria 8962862
319 8054165014 8054160619 Bacteria 7783213
320 8056452383 8056447290 Bacteria 7680491
321 8056673176 8056667051 Bacteria 6953971
322 Ga0070667_100006107
323 Ga0068859_100008523
324 Ga0081455_10009622
325 Ga0081540_1006340
326 Ga0081539_10001179
327 Ga0075367_10000916
328 Ga0097620_100008523
329 Ga0105247_10002037
330 Ga0157369_10007207
331 Ga0182008_10002208
332 Ga0182008_10003638
333 Ga0182007_10001114
334 Ga0182007_10005481
335 Ga0183367_1006
336 Ga0213875_10013724
337 Ga0224712_10003511
338 Ga0207710_10019234
339 Ga0207664_10004174
340 Ga0307515_10002026
341 Ga0307515_10002392
342 Ga0307515_10047479
343 Ga0307512_10020229
344 Ga0265340_10001372
345 Ga0307513_10001613
346 Ga0307513_10003236
347 Ga0307513_10104538
348 Ga0307509_10032749
349 Ga0307508_10002528
350 Ga0307508_10030412
351 Ga0316579_10000182
352 Ga0316576_10010499
353 Ga0307516_10017205
354 Ga0307507_10000001
355 Ga0307507_10018449
356 Ga0307507_10026478
357 Ga0373953_0004008
358 Ga0373955_0003303
359 Ga0373933_0016143
360 Ga0395900_0045299
361 Ga0436364_1450416
362 Ga0451853_2542224
363 Ga0439457_000074
364 Ga0450894_000102
365 Ga0450896_000401
366 Ga0450898_001132
367 Ga0450899_000098
368 Ga0450903_000064
369 Ga0450906_001062
370 Ga0450908_003442
371 Ga0466969_0004392
372 Ga0466972_0004247
373 Ga0466966_0003602
374 Ga0466961_0001036
375 Ga0466961_0001173
376 Ga0466961_0014443
377 Ga0466961_0016604
378 Ga0466963_0002051
379 Ga0466963_0011375
380 Ga0466971_0000232
381 Ga0466970_0000648
382 Ga0466957_0000456
383 Ga0466959_0007880
384 Ga0466959_0017533
385 Ga0466959_0024649
386 Ga0466958_0012526
387 Ga0466958_0019829
388 Ga0495592_0022594
389 Ga0495592_0036560
390 Ga0495603_0003743
391 Ga0495603_0005800
392 Ga0495603_0012120
393 Ga0495603_0018336
394 Ga0495629_0001256
395 Ga0495629_0011004
396 Ga0495651_0000312
397 Ga0495651_0000488
398 Ga0495651_0002187
399 Ga0495651_0004577
400 Ga0495651_0011170
401 Ga0495651_0033860
402 Ga0495653_0003422
403 Ga0495605_0001675
404 Ga0495664_0006827
405 Ga0495594_0003225
406 Ga0495594_0008208
407 Ga0495607_0028712
408 Ga0495606_0001850
409 Ga0495618_0018701
410 Ga0495628_0012492
411 Ga0495628_0020501
412 Ga0495643_0004147
413 Ga0495652_0009130
414 Ga0495652_0009378
415 Ga0495652_0048497
416 Ga0495665_0000429
417 Ga0495640_0044465
418 Ga0495640_0048787
419 Ga0495587_0000411
420 Ga0495587_0000928
421 Ga0495633_0026371
422 Ga0495667_0000285
423 Ga0495667_0029604
424 Ga0495634_0000292
425 Ga0495634_0001068
426 Ga0495634_0006662
427 Ga0495625_0004464
428 Ga0495635_0010587
429 Ga0495635_0022351
430 Ga0495661_0054933
431 Ga0495588_0000506
432 Ga0495588_0014216
433 Ga0495657_0017724
434 Ga0495657_0021138
435 Ga0495657_0024778
436 Ga0495623_0000355
437 Ga0495623_0006120
438 Ga0495646_0007086
439 Ga0495658_0018738
440 Ga0495613_0000533
441 Ga0495613_0000580
442 Ga0495613_0004244
443 Ga0495613_0049712
444 Ga0495670_0001523
445 Ga0495589_0005801
446 Ga0495600_0000180
447 Ga0495604_0000064
448 Ga0495604_0000383
449 Ga0495604_0004155
450 Ga0495604_0007982
451 Ga0495604_0009055
452 Ga0495604_0013396
453 Ga0495636_0001739
454 Ga0495636_0002676
455 Ga0495676_0004789
456 Ga0495676_0009563
457 Ga0495676_0013669
458 Ga0495676_0027308
459 Ga0495680_0005653
460 Ga0495680_0013315
461 Ga0495687_003257
462 Ga0495687_007385
463 Ga0495675_0001515
464 Ga0495675_0002803
465 Ga0495685_000208
466 Ga0495681_0001401
467 Ga0495684_0005333
468 Ga0495593_0022028
469 Ga0495614_0010942
470 Ga0495614_0012168
471 Ga0496102_0000142
472 Ga0496102_0012658
473 Ga0496103_0000085
474 Ga0496118_0014983
475 Ga0496121_0033730
476 Ga0496126_0000026
477 Ga0501031_0000642
478 Ga0501032_0002633
479 Ga0501033_0028344
480 Ga0501034_0019611
481 Ga0501034_0021011
482 Ga0501034_0026902
483 Ga0501034_0028320
484 Ga0501034_0059959
485 Ga0501036_0000809
486 Ga0501036_0023964
487 Ga0501036_0050061
488 Ga0501037_0000644
489 Ga0501037_0003992
490 Ga0501038_0004611
491 Ga0501038_0034824
492 Ga0501039_0005182
493 Ga0501041_0025025
494 Ga0501043_0003346
495 Ga0501043_0023561
496 Ga0501043_0037646
497 Ga0501046_0003711
498 Ga0501047_0000025
499 Ga0501047_0001101
500 Ga0501047_0002463
501 Ga0501047_0085767
502 Ga0501048_0018521
503 Ga0501068_0000363
504 Ga0501070_0006770
505 Ga0501071_0000362
506 Ga0501072_0000272
507 Ga0501074_0000332
508 Ga0501074_0033144
509 Ga0501035_0003482
510 Ga0501035_0004088
511 Ga0501035_0006265
512 Ga0501044_0004754
513 Ga0501044_0007826
514 nmdc:mga06z11_10276_c1
515 Ga0495655_0004449
516 Ga0495619_0014215
517 Ga0500578_0019664
518 Ga0500644_0006008
519 Ga0500628_002565
520 Ga0500652_000767
521 Ga0500658_0003671
522 Ga0500616_0000322
523 Ga0500616_0002786
524 Ga0500616_0007205
525 Ga0500634_0020732
526 Ga0501084_0001078
527 Ga0501082_0001405
528 Ga0466962_0004983
529 Ga0466962_0012448
530 Ga0530510_0040938
531 2990046516
532 2547406848
533 2554258573
534 2585304825
535 2585319461
536 2616700743
537 2616899893
538 2643759766
539 2643944671
540 2644018679
541 2644179814
542 2644269266
543 2644385406
544 2644431569
545 2644436394
546 2644462815
547 2644625754
548 2768646036
549 2776373930
550 2784587875
551 2785344271
552 2785368598
553 2786669702
554 2793976139
555 2804844890
556 2808841282
557 2808919790
558 2809231462
559 2811848285
560 2812358976
561 2812481222
562 2819693664
563 2819742840
564 2837272090
565 2852642216
566 2856741421
567 2862184886
568 2862288136
569 2862295664
570 2862392580
571 2862509498
572 2862579991
573 2862711026
574 2863068547
575 2863405524
576 2866556117
577 2866614046
578 2867348143
579 2867371104
580 2867431085
581 2867479678
582 2868093042
583 2873156551
584 2875393802
585 2877681930
586 2891396391
587 2891557925
588 2891567741
589 2899362909
590 2912720898
591 2912725011
592 2912759937
593 2918503833
594 2919468682
595 2935392287
596 2946066901
597 2946075229
598 2947230333
599 2954003644
600 2954387053
601 2954676110
602 2954677707
603 2954686447
604 2954688057
605 2954697889
606 2954704327
607 2954717000
608 2954726951
609 2954734846
610 2954745872
611 2954753718
612 2954764845
613 2966603276
614 2990061886
615 2990093396
616 2995471126
617 2997456558
618 2997608159
619 3006321820
620 3006399650
621 3006427305
622 3006488639
623 3006501781
624 8008488826
625 8008559549
626 8008579603
627 8023629280
628 8025419328
629 8025481434
630 8025528309
631 8025536988
632 8033686006
633 8047898940
634 8048127697
635 8048359979
636 8048375898
637 8048382309
638 8048408382
639 8053950183
640 8054165014
641 8056452383
642 8056673176

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10458

Val_tRNA-synt_C

Valyl tRNA synthetase tRNA binding arm

868

933

0.99

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

89

503

0.98

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

505

631

0.94

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

674

819

0.94

PF13603

tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

305

377

0.91

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

111

184

0.89

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

528

651

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wka-assembly1.cif.gz_A structural basis for non-cognate amino acid discrimination by the valyl-trna synthetase editing domain 0.9338 211 350
1wka-assembly1.cif.gz_A structural basis for non-cognate amino acid discrimination by the valyl-trna synthetase editing domain 0.9085 211 350
7n11-assembly1.cif.gz_A crystal structure of the m. abscessus leurs editing domain in complex with epetraborole-amp adduct 0.8969 213 343
1ue0-assembly2.cif.gz_B isoleucyl-trna synthetase editing domain complexed with l-valine 0.8635 212 347
1udz-assembly2.cif.gz_B isoleucyl-trna synthetase editing domain 0.8614 213 347
ID Description Score Start End Superfamily
af_Q23360_47_213_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9622 47 205 3.40.50.620
af_A0A0B4KF06_305_443_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9619 209 343 3.90.740.10
af_Q8IKL5_71_238_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9611 47 205 3.40.50.620
af_O14160_232_372_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9562 213 345 3.90.740.10
af_A0A0P0XWD3_309_435_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9528 218 339 3.90.740.10
ID Description Score Start End GO Terms
AF-A0A659QZ85-F1-model_v4 valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) 0.9711 17 177 GO:0004832
GO:0005524
GO:0005829
GO:0006438
AF-A0A641V653-F1-model_v4 deleted 0.9658 221 317
AF-A0A142I3J0-F1-model_v4 valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) 0.9651 46 178 GO:0004832
GO:0005524
GO:0005829
GO:0006438
AF-A0A659QZ85-F1-model_v4 valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) 0.9595 17 177 GO:0004832
GO:0005524
GO:0005829
GO:0006438
AF-A0A1S3ZCM9-F1-model_v4 valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) 0.9594 19 362 GO:0002161
GO:0004832
GO:0005524
GO:0005829
GO:0006438
GO:0009791
GO:0048608

Map