F406229

General Info

Members Datasets Scaffolds Average Seq Length
321 197 642 567

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862507626|2862511009
Length 598
Sequence GRRRVRSGRPGLSRLVDDVYGHERKGGAPTVDEGQMQEVKAAEGHDVVSGTGAPGHPRGIAPGTARPSWVEWLTTTDHKKIGTLYLVSAFVFFVVGGVMALVMRAELARPGLQIMSNEQFNQAFTMHGSIMLLMFAMPLFTGFANWIMPLQIGAPDVAFPRLNMLAYWLFFLGSSIAASGFLTPDGAAGFGWFLYAPLSDAVYSPGVGADLWIMGVALSGFGSILGAVNFITTIICMRAPGMTMFRLPIFTWNVLLTSVLVLMVFPVLAAALFALEYDRRFGGHIFDAANGGALLWQHLFWFFGHPEVYILALPFFGIVSEVIPVFSRKPMFGYMGLIGATIAIAGLSLTVWAHHMYTTGGVLLPFFSFMTFLIAIPTGVKFFNWIGTMWKGSLSFETPMLWTAGFLVTFLFGGLTGVILASPPLDFHLTDSYFVVAHFHYTVFGTVVYAMFAGFHFWWPKFTGKMLDERLGKITFWTLTAGFHLTFLVQHWLGAEGMPRRYSDYLAADGFTALNTLSSIGSFLLGMSLLPFFYNVWRTAKYGEKVEVDDPWGYGRSLEWATSCPPPRHNFTSLPRIRSESPAFDVHHPEIAAMETVG

Samples

Sample ID Description Type Environment
1 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
2 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
4 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
5 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
6 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
7 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
8 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
9 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
10 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
11 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
12 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
13 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
14 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
15 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
16 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
20 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
21 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
22 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
23 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
24 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
25 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
26 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
27 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
28 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
29 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
30 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
31 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
32 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
33 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
34 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
35 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
36 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
37 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
38 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
39 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
40 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
41 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
42 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
43 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
44 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
45 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
46 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
47 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
48 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
49 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
50 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
51 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
52 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
53 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
54 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
55 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
56 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
57 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
58 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
59 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
60 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
61 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
62 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
63 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
64 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
65 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
66 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
67 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
68 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
71 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
72 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
73 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
74 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
75 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
76 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
77 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
78 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
79 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
82 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
83 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
86 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
87 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
88 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
89 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
90 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
91 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
92 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
93 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
94 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
95 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
96 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
117 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
118 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
119 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
120 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
121 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
122 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
123 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
124 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
125 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
126 2643221576 Nocardioides sp. Root614 Isolate Unclassified
127 2643221578 Streptomyces sp. Root63 Isolate Unclassified
128 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
129 2643221590 Nocardioides sp. Root682 Isolate Unclassified
130 2643221604 Nocardioides sp. Root190 Isolate Unclassified
131 2643221617 Nocardioides sp. Root79 Isolate Unclassified
132 2643221620 Nocardioides sp. Root240 Isolate Unclassified
133 2643221670 Streptomyces sp. Root431 Isolate Unclassified
134 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
135 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
136 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
137 2738541305 Nocardioides sp. CF167 Isolate Unclassified
138 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
139 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
140 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
141 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
142 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
143 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
144 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
145 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
146 2808606448 Streptomyces sp. 193411 Isolate Unclassified
147 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
148 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
149 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
150 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
151 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
152 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
153 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
154 2862574272 Streptomyces sp. AcE210 Isolate Nodule
155 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
156 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
157 2867428634 Streptomyces sp. RP5T Isolate Unclassified
158 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
159 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
160 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
161 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
162 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
163 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
164 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
165 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
166 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
167 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
168 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
169 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
170 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
171 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
172 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
173 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
174 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
175 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
176 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
177 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
178 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
179 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
180 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
181 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
182 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
183 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
184 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
185 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
186 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
187 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
188 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
189 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
190 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
191 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
192 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
193 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
194 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
195 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
196 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
197 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 62.62
Metatranscriptomes 0.93
Isolates 36.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.8
Nodule 1.56
Rhizoplane 6.23
Rhizosphere 69.78
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070674_100051066 3300005356 Bacteria 2848
2 Ga0081455_10051153 3300005937 Bacteria 3545
3 Ga0075363_100051113 3300006048 Bacteria 2203
4 Ga0075367_10001041 3300006178 Bacteria 11439
5 Ga0075367_10005812 3300006178 Bacteria 6175
6 Ga0105245_10008837 3300009098 Bacteria 8790
7 Ga0105243_10137457 3300009148 Bacteria 2081
8 Ga0105242_10076780 3300009176 Bacteria 2786
9 Ga0105242_10114673 3300009176 Bacteria 2303
10 Ga0105239_10081633 3300010375 Bacteria 3559
11 Ga0157375_10008878 3300013308 Bacteria 8796
12 Ga0163163_10255416 3300014325 Bacteria 1803
13 Ga0182008_10001919 3300014497 Bacteria 13438
14 Ga0182008_10016144 3300014497 Bacteria 3885
15 Ga0157376_10049603 3300014969 Bacteria 3478
16 Ga0182007_10000425 3300015262 Bacteria 25802
17 Ga0182007_10010541 3300015262 Bacteria 3643
18 Ga0209758_1002113 3300025297 Bacteria 21004
19 Ga0209758_1011356 3300025297 Bacteria 5172
20 Ga0207426_1002390 3300025302 Bacteria 12103
21 Ga0207696_1020518 3300025711 Bacteria 2130
22 Ga0207691_10095891 3300025940 Bacteria 2652
23 Ga0207711_10081803 3300025941 Bacteria 2822
24 Ga0307517_10019991 3300028786 Bacteria 8559
25 Ga0307512_10025397 3300030522 Bacteria 5249
26 Ga0307513_10009259 3300031456 Bacteria 12465
27 Ga0307508_10024250 3300031616 Bacteria 5505
28 Ga0307514_10014518 3300031649 Bacteria 6516
29 Ga0316576_10000331 3300031727 Bacteria 21224
30 Ga0316576_10013105 3300031727 Bacteria 5500
31 Ga0316576_10033976 3300031727 Bacteria 3633
32 Ga0307516_10016056 3300031730 Bacteria 7851
33 Ga0307510_10046831 3300033180 Bacteria 4643
34 Ga0316574_0020883 3300035398 Bacteria 3881
35 Ga0316584_0001773 3300036712 Bacteria 13279
36 Ga0316584_0009276 3300036712 Bacteria 6822
37 Ga0395898_0084318 3300037466 Bacteria 3063
38 Ga0395898_0153490 3300037466 Bacteria 2203
39 Ga0439436_0006753 3300041404 Bacteria 3526
40 Ga0439439_0000549 3300041406 Bacteria 6549
41 Ga0439449_0000137 3300042007 Bacteria 24720
42 Ga0439455_0005891 3300042012 Bacteria 2514
43 Ga0439457_000046 3300042014 Bacteria 25645
44 Ga0439457_000184 3300042014 Bacteria 16401
45 Ga0439457_001245 3300042014 Bacteria 7652
46 Ga0439462_0001927 3300042015 Bacteria 4731
47 Ga0450894_000086 3300042131 Bacteria 15286
48 Ga0450894_000248 3300042131 Bacteria 9682
49 Ga0450896_000037 3300042133 Bacteria 7882
50 Ga0450896_001017 3300042133 Bacteria 3276
51 Ga0450899_000065 3300042135 Bacteria 8675
52 Ga0450899_001915 3300042135 Bacteria 2309
53 Ga0450903_000827 3300042138 Bacteria 6031
54 Ga0450906_000822 3300042145 Bacteria 6846
55 Ga0466972_0000586 3300044658 Bacteria 17695
56 Ga0466972_0001997 3300044658 Bacteria 9983
57 Ga0466972_0008414 3300044658 Bacteria 5171
58 Ga0466972_0016336 3300044658 Bacteria 3710
59 Ga0466966_0001120 3300044684 Bacteria 17207
60 Ga0466966_0006971 3300044684 Bacteria 7480
61 Ga0466961_0004494 3300044693 Bacteria 8745
62 Ga0466961_0029619 3300044693 Bacteria 3517
63 Ga0466961_0030602 3300044693 Bacteria 3459
64 Ga0466963_0008863 3300044694 Bacteria 6036
65 Ga0466971_0000382 3300044719 Bacteria 17038
66 Ga0466971_0011446 3300044719 Bacteria 3886
67 Ga0466971_0017620 3300044719 Bacteria 3162
68 Ga0466968_0009608 3300044735 Bacteria 3725
69 Ga0466970_0017745 3300044765 Bacteria 3680
70 Ga0466957_0001085 3300044842 Bacteria 14035
71 Ga0466957_0011401 3300044842 Bacteria 5129
72 Ga0466960_0001090 3300044901 Bacteria 9756
73 Ga0466960_0033910 3300044901 Bacteria 2375
74 Ga0466959_0000221 3300045049 Bacteria 37038
75 Ga0466959_0035858 3300045049 Bacteria 3665
76 Ga0466967_0035790 3300045976 Bacteria 4231
77 Ga0466967_0039350 3300045976 Bacteria 4064
78 Ga0466967_0052976 3300045976 Bacteria 3565
79 Ga0495592_0003676 3300046454 Bacteria 11051
80 Ga0495592_0006381 3300046454 Bacteria 8784
81 Ga0495603_0000301 3300046455 Bacteria 26310
82 Ga0495603_0007497 3300046455 Bacteria 6560
83 Ga0495603_0010502 3300046455 Bacteria 5610
84 Ga0495603_0013374 3300046455 Bacteria 4965
85 Ga0495651_0008156 3300046462 Bacteria 8031
86 Ga0495653_0011592 3300046463 Bacteria 7195
87 Ga0495639_0028459 3300046475 Bacteria 2476
88 Ga0495662_0000153 3300046476 Bacteria 27091
89 Ga0495664_0000982 3300046477 Bacteria 14656
90 Ga0495664_0006889 3300046477 Bacteria 6291
91 Ga0495664_0013752 3300046477 Bacteria 4588
92 Ga0495594_0000785 3300046499 Bacteria 16363
93 Ga0495644_0032516 3300046523 Bacteria 1971
94 Ga0495666_0000291 3300046526 Bacteria 21941
95 Ga0495666_0002783 3300046526 Bacteria 8739
96 Ga0495665_0003127 3300046531 Bacteria 8951
97 Ga0495586_0010609 3300046535 Bacteria 4904
98 Ga0495645_0012658 3300046543 Bacteria 5949
99 Ga0495633_0011818 3300046558 Bacteria 4681
100 Ga0495667_0010467 3300046559 Bacteria 6275
101 Ga0495667_0062897 3300046559 Bacteria 2431
102 Ga0495668_0004207 3300046616 Bacteria 10376
103 Ga0495634_0002168 3300046642 Bacteria 16508
104 Ga0495634_0015204 3300046642 Bacteria 5533
105 Ga0495635_0040282 3300046663 Bacteria 3228
106 Ga0495588_0011916 3300046674 Bacteria 4095
107 Ga0495588_0013464 3300046674 Bacteria 3898
108 Ga0495588_0028011 3300046674 Bacteria 2818
109 Ga0495657_0020346 3300046675 Bacteria 4771
110 Ga0495657_0056113 3300046675 Bacteria 2625
111 Ga0495599_0007408 3300046678 Bacteria 6652
112 Ga0495623_0004835 3300046679 Bacteria 8835
113 Ga0495623_0036252 3300046679 Bacteria 3160
114 Ga0495646_0008326 3300046680 Bacteria 6595
115 Ga0495646_0029864 3300046680 Bacteria 3404
116 Ga0495658_0005695 3300046683 Bacteria 6120
117 Ga0495613_0009692 3300046689 Bacteria 7155
118 Ga0495589_0015875 3300046794 Bacteria 3871
119 Ga0495604_0000757 3300047317 Bacteria 27189
120 Ga0495604_0001869 3300047317 Bacteria 17124
121 Ga0495604_0003209 3300047317 Bacteria 13065
122 Ga0495636_0000910 3300047318 Bacteria 11010
123 Ga0495636_0017985 3300047318 Bacteria 2834
124 Ga0495636_0019445 3300047318 Bacteria 2731
125 Ga0495676_0007525 3300047321 Bacteria 9985
126 Ga0495676_0007592 3300047321 Bacteria 9941
127 Ga0495676_0018421 3300047321 Bacteria 6154
128 Ga0495687_001922 3300047443 Bacteria 17816
129 Ga0495675_0037771 3300047444 Bacteria 3075
130 Ga0495675_0069180 3300047444 Bacteria 2229
131 Ga0495681_0013335 3300047470 Bacteria 4775
132 Ga0495684_0049045 3300047471 Bacteria 3227
133 Ga0495686_0041878 3300047472 Bacteria 2914
134 Ga0495593_0025820 3300047673 Bacteria 3250
135 Ga0495593_0028253 3300047673 Bacteria 3081
136 Ga0495602_0062772 3300048088 Bacteria 3222
137 Ga0495614_0001806 3300048089 Bacteria 9369
138 Ga0495614_0033404 3300048089 Bacteria 2213
139 Ga0495614_0043621 3300048089 Bacteria 1923
140 Ga0496101_0034083 3300048904 Bacteria 3595
141 Ga0496102_0001345 3300048905 Bacteria 22026
142 Ga0496104_0068630 3300048907 Bacteria 3369
143 Ga0496104_0079854 3300048907 Bacteria 3118
144 Ga0496104_0172110 3300048907 Bacteria 2076
145 Ga0496105_0016812 3300048908 Bacteria 5849
146 Ga0496105_0051327 3300048908 Bacteria 3407
147 Ga0496108_0001428 3300048911 Bacteria 18851
148 Ga0496108_0012808 3300048911 Bacteria 6830
149 Ga0496109_0001065 3300048912 Bacteria 22723
150 Ga0496109_0006331 3300048912 Bacteria 9970
151 Ga0496109_0018514 3300048912 Bacteria 6116
152 Ga0496110_0001241 3300048913 Bacteria 18212
153 Ga0496110_0011283 3300048913 Bacteria 7304
154 Ga0496110_0022903 3300048913 Bacteria 5308
155 Ga0496112_0108993 3300048915 Bacteria 2740
156 Ga0496114_0007112 3300048917 Bacteria 8829
157 Ga0496114_0024754 3300048917 Bacteria 4900
158 Ga0496115_0007868 3300048918 Bacteria 7862
159 Ga0501315_000310 3300049531 Bacteria 3156
160 Ga0501318_000189 3300049534 Bacteria 3222
161 Ga0501323_000462 3300049539 Bacteria 3020
162 Ga0501031_0026414 3300049568 Bacteria 3785
163 Ga0501033_0001226 3300049570 Bacteria 23025
164 Ga0501033_0007303 3300049570 Bacteria 8619
165 Ga0501033_0008064 3300049570 Bacteria 8156
166 Ga0501034_0002536 3300049571 Bacteria 21841
167 Ga0501034_0005437 3300049571 Bacteria 13921
168 Ga0501034_0044819 3300049571 Bacteria 4471
169 Ga0501034_0064113 3300049571 Bacteria 3688
170 Ga0501034_0067974 3300049571 Bacteria 3574
171 Ga0501036_0000116 3300049572 Bacteria 49710
172 Ga0501036_0000277 3300049572 Bacteria 35238
173 Ga0501036_0110203 3300049572 Bacteria 2326
174 Ga0501036_0157031 3300049572 Bacteria 1918
175 Ga0501037_0014083 3300049573 Bacteria 5891
176 Ga0501038_0001773 3300049574 Bacteria 20034
177 Ga0501038_0003646 3300049574 Bacteria 14345
178 Ga0501038_0049772 3300049574 Bacteria 3622
179 Ga0501043_0003901 3300049579 Bacteria 12244
180 Ga0501043_0027159 3300049579 Bacteria 4493
181 Ga0501043_0048534 3300049579 Bacteria 3337
182 Ga0501047_0023874 3300049581 Bacteria 5872
183 Ga0501048_0017248 3300049582 Bacteria 5320
184 Ga0501070_0000283 3300049586 Bacteria 47512
185 Ga0501074_0002404 3300049590 Bacteria 13055
186 Ga0501074_0007556 3300049590 Bacteria 7864
187 Ga0501080_0050717 3300049742 Bacteria 3862
188 Ga0501035_0009866 3300049822 Bacteria 8863
189 Ga0501035_0010143 3300049822 Bacteria 8742
190 Ga0501035_0014964 3300049822 Bacteria 7158
191 Ga0501035_0030967 3300049822 Bacteria 4873
192 Ga0501035_0038843 3300049822 Bacteria 4309
193 Ga0501035_0225408 3300049822 Bacteria 1599
194 Ga0501044_0001176 3300049823 Bacteria 30996
195 Ga0501044_0002771 3300049823 Bacteria 19965
196 Ga0501044_0007526 3300049823 Bacteria 11978
197 Ga0501044_0014904 3300049823 Bacteria 8380
198 Ga0501044_0033727 3300049823 Bacteria 5376
199 nmdc:mga03n38_20795_c1 3300050490 Bacteria 2632
200 nmdc:mga06z11_2816_c1 3300050494 Bacteria 6175
201 nmdc:mga07m45_63280_c1 3300050496 Bacteria 2098
202 Ga0495601_0006178 3300053077 Bacteria 6991
203 Ga0466962_0000332 3300061719 Bacteria 20257
204 Ga0466962_0000908 3300061719 Bacteria 13429
205 2862511009 2862507626 Bacteria 9425308
206 2547405504 2547132111 Bacteria 8013147
207 2547409549 2547132111 Bacteria 8013147
208 2585298860 2582581312 Bacteria 7308206
209 2585299833 2582581312 Bacteria 7308206
210 2616696419 2616644814 Bacteria 11555299
211 2616899470 2616644941 Bacteria 8510691
212 2643889072 2643221576 Bacteria 5214352
213 2643897414 2643221578 Bacteria 9213798
214 2643900885 2643221578 Bacteria 9213798
215 2643944159 2643221587 Bacteria 7586415
216 2643958127 2643221590 Bacteria 5214697
217 2644034607 2643221604 Bacteria 5014917
218 2644098978 2643221617 Bacteria 5139111
219 2644114859 2643221620 Bacteria 5134593
220 2644389394 2643221670 Bacteria 6497041
221 2644407032 2643221673 Bacteria 9196637
222 2644408559 2643221673 Bacteria 9196637
223 2644431007 2643221677 Bacteria 7584031
224 2644435820 2643221678 Bacteria 9540101
225 2738867982 2738541305 Bacteria 4910150
226 2768644338 2767802112 Bacteria 6465194
227 2784587424 2784132148 Bacteria 8627943
228 2784592328 2784132148 Bacteria 8627943
229 2785344905 2784746763 Bacteria 9783172
230 2785345422 2784746763 Bacteria 9783172
231 2785346758 2784746763 Bacteria 9783172
232 2786666649 2786546132 Bacteria 10419719
233 2793978215 2791355406 Bacteria 11364898
234 2804844443 2802429296 Bacteria 7227771
235 2804848544 2802429296 Bacteria 7227771
236 2808840631 2808606359 Bacteria 9866990
237 2808848918 2808606359 Bacteria 9866990
238 2808915602 2808606375 Bacteria 9466072
239 2808915781 2808606375 Bacteria 9466072
240 2808916016 2808606375 Bacteria 9466072
241 2808916931 2808606375 Bacteria 9466072
242 2808919214 2808606375 Bacteria 9466072
243 2809230997 2808606448 Bacteria 8656184
244 2809235958 2808606448 Bacteria 8656184
245 2812332297 2811994874 Bacteria 5367947
246 2812353839 2811994879 Bacteria 9313447
247 2812477260 2811994917 Bacteria 7761064
248 2812478877 2811994917 Bacteria 7761064
249 2812479508 2811994917 Bacteria 7761064
250 2812481677 2811994917 Bacteria 7761064
251 2812483092 2811994917 Bacteria 7761064
252 2819743214 2818991472 Bacteria 10089953
253 2855387721 2855386786 Bacteria 4752232
254 2862281761 2862281513 Bacteria 9621493
255 2862288642 2862281513 Bacteria 9621493
256 2862384708 2862382967 Bacteria 10317375
257 2862385577 2862382967 Bacteria 10317375
258 2862512577 2862507626 Bacteria 9425308
259 2862514364 2862507626 Bacteria 9425308
260 2862516223 2862507626 Bacteria 9425308
261 2862583390 2862574272 Bacteria 10567477
262 2862709790 2862705112 Bacteria 6563286
263 2863406168 2863404153 Bacteria 9672205
264 2863409155 2863404153 Bacteria 9672205
265 2867433495 2867428634 Bacteria 9590268
266 2873156979 2873151551 Bacteria 8625867
267 2875393358 2875391855 Bacteria 7600475
268 2875398404 2875391855 Bacteria 7600475
269 2912716682 2912715099 Bacteria 9460473
270 2912725444 2912723979 Bacteria 8557534
271 2912727030 2912723979 Bacteria 8557534
272 2912731167 2912723979 Bacteria 8557534
273 2918502810 2918501144 Bacteria 8668083
274 2919468181 2919468124 Bacteria 9133025
275 2919473329 2919468124 Bacteria 9133025
276 2946045794 2946045630 Bacteria 8527308
277 2946051334 2946045630 Bacteria 8527308
278 2946053316 2946045630 Bacteria 8527308
279 2946071857 2946064051 Bacteria 8957905
280 2946074625 2946072368 Bacteria 8999607
281 2946078808 2946072368 Bacteria 8999607
282 2947225069 2947224130 Bacteria 9938529
283 2947226346 2947224130 Bacteria 9938529
284 2947232737 2947224130 Bacteria 9938529
285 2954004324 2954002825 Bacteria 9173742
286 2954009253 2954002825 Bacteria 9173742
287 2954681740 2954673503 Bacteria 9685905
288 2954691184 2954682443 Bacteria 9862841
289 2954711813 2954711539 Bacteria 10867210
290 2954721730 2954721474 Bacteria 10456478
291 2954740092 2954731030 Bacteria 10243860
292 2954740642 2954740390 Bacteria 10229294
293 2954758920 2954749733 Bacteria 10366972
294 2954759652 2954759201 Bacteria 9358192
295 2954760650 2954759201 Bacteria 9358192
296 2990065343 2990059506 Bacteria 9321252
297 2995469830 2995463766 Bacteria 8577691
298 2997456235 2997451912 Bacteria 8492419
299 2997600624 2997600082 Bacteria 9896405
300 3006430859 3006425503 Bacteria 6491253
301 3006492112 3006486233 Bacteria 8157040
302 3006495587 3006493962 Bacteria 8825450
303 8008489484 8008485437 Bacteria 7198341
304 8008561624 8008558824 Bacteria 10610750
305 8008562147 8008558824 Bacteria 10610750
306 8008575489 8008574985 Bacteria 7815457
307 8008580041 8008574985 Bacteria 7815457
308 8023627464 8023623736 Bacteria 8593882
309 8025414079 8025413630 Bacteria 7014048
310 8025418147 8025413630 Bacteria 7014048
311 8025528940 8025524527 Bacteria 7197316
312 8033689684 8033684223 Bacteria 6906479
313 8047894146 8047893842 Bacteria 11723082
314 8048130178 8048127548 Bacteria 11053136
315 8048365166 8048356638 Bacteria 11044339
316 8048371163 8048369669 Bacteria 11666822
317 8048379964 8048379754 Bacteria 11877923
318 8048409009 8048406513 Bacteria 8936924
319 8048410981 8048406513 Bacteria 8936924
320 8048412032 8048406513 Bacteria 8936924
321 8056837891 8056829672 Bacteria 9045328
322 Ga0070674_100051066
323 Ga0081455_10051153
324 Ga0075363_100051113
325 Ga0075367_10001041
326 Ga0075367_10005812
327 Ga0105245_10008837
328 Ga0105243_10137457
329 Ga0105242_10076780
330 Ga0105242_10114673
331 Ga0105239_10081633
332 Ga0157375_10008878
333 Ga0163163_10255416
334 Ga0182008_10001919
335 Ga0182008_10016144
336 Ga0157376_10049603
337 Ga0182007_10000425
338 Ga0182007_10010541
339 Ga0209758_1002113
340 Ga0209758_1011356
341 Ga0207426_1002390
342 Ga0207696_1020518
343 Ga0207691_10095891
344 Ga0207711_10081803
345 Ga0307517_10019991
346 Ga0307512_10025397
347 Ga0307513_10009259
348 Ga0307508_10024250
349 Ga0307514_10014518
350 Ga0316576_10000331
351 Ga0316576_10013105
352 Ga0316576_10033976
353 Ga0307516_10016056
354 Ga0307510_10046831
355 Ga0316574_0020883
356 Ga0316584_0001773
357 Ga0316584_0009276
358 Ga0395898_0084318
359 Ga0395898_0153490
360 Ga0439436_0006753
361 Ga0439439_0000549
362 Ga0439449_0000137
363 Ga0439455_0005891
364 Ga0439457_000046
365 Ga0439457_000184
366 Ga0439457_001245
367 Ga0439462_0001927
368 Ga0450894_000086
369 Ga0450894_000248
370 Ga0450896_000037
371 Ga0450896_001017
372 Ga0450899_000065
373 Ga0450899_001915
374 Ga0450903_000827
375 Ga0450906_000822
376 Ga0466972_0000586
377 Ga0466972_0001997
378 Ga0466972_0008414
379 Ga0466972_0016336
380 Ga0466966_0001120
381 Ga0466966_0006971
382 Ga0466961_0004494
383 Ga0466961_0029619
384 Ga0466961_0030602
385 Ga0466963_0008863
386 Ga0466971_0000382
387 Ga0466971_0011446
388 Ga0466971_0017620
389 Ga0466968_0009608
390 Ga0466970_0017745
391 Ga0466957_0001085
392 Ga0466957_0011401
393 Ga0466960_0001090
394 Ga0466960_0033910
395 Ga0466959_0000221
396 Ga0466959_0035858
397 Ga0466967_0035790
398 Ga0466967_0039350
399 Ga0466967_0052976
400 Ga0495592_0003676
401 Ga0495592_0006381
402 Ga0495603_0000301
403 Ga0495603_0007497
404 Ga0495603_0010502
405 Ga0495603_0013374
406 Ga0495651_0008156
407 Ga0495653_0011592
408 Ga0495639_0028459
409 Ga0495662_0000153
410 Ga0495664_0000982
411 Ga0495664_0006889
412 Ga0495664_0013752
413 Ga0495594_0000785
414 Ga0495644_0032516
415 Ga0495666_0000291
416 Ga0495666_0002783
417 Ga0495665_0003127
418 Ga0495586_0010609
419 Ga0495645_0012658
420 Ga0495633_0011818
421 Ga0495667_0010467
422 Ga0495667_0062897
423 Ga0495668_0004207
424 Ga0495634_0002168
425 Ga0495634_0015204
426 Ga0495635_0040282
427 Ga0495588_0011916
428 Ga0495588_0013464
429 Ga0495588_0028011
430 Ga0495657_0020346
431 Ga0495657_0056113
432 Ga0495599_0007408
433 Ga0495623_0004835
434 Ga0495623_0036252
435 Ga0495646_0008326
436 Ga0495646_0029864
437 Ga0495658_0005695
438 Ga0495613_0009692
439 Ga0495589_0015875
440 Ga0495604_0000757
441 Ga0495604_0001869
442 Ga0495604_0003209
443 Ga0495636_0000910
444 Ga0495636_0017985
445 Ga0495636_0019445
446 Ga0495676_0007525
447 Ga0495676_0007592
448 Ga0495676_0018421
449 Ga0495687_001922
450 Ga0495675_0037771
451 Ga0495675_0069180
452 Ga0495681_0013335
453 Ga0495684_0049045
454 Ga0495686_0041878
455 Ga0495593_0025820
456 Ga0495593_0028253
457 Ga0495602_0062772
458 Ga0495614_0001806
459 Ga0495614_0033404
460 Ga0495614_0043621
461 Ga0496101_0034083
462 Ga0496102_0001345
463 Ga0496104_0068630
464 Ga0496104_0079854
465 Ga0496104_0172110
466 Ga0496105_0016812
467 Ga0496105_0051327
468 Ga0496108_0001428
469 Ga0496108_0012808
470 Ga0496109_0001065
471 Ga0496109_0006331
472 Ga0496109_0018514
473 Ga0496110_0001241
474 Ga0496110_0011283
475 Ga0496110_0022903
476 Ga0496112_0108993
477 Ga0496114_0007112
478 Ga0496114_0024754
479 Ga0496115_0007868
480 Ga0501315_000310
481 Ga0501318_000189
482 Ga0501323_000462
483 Ga0501031_0026414
484 Ga0501033_0001226
485 Ga0501033_0007303
486 Ga0501033_0008064
487 Ga0501034_0002536
488 Ga0501034_0005437
489 Ga0501034_0044819
490 Ga0501034_0064113
491 Ga0501034_0067974
492 Ga0501036_0000116
493 Ga0501036_0000277
494 Ga0501036_0110203
495 Ga0501036_0157031
496 Ga0501037_0014083
497 Ga0501038_0001773
498 Ga0501038_0003646
499 Ga0501038_0049772
500 Ga0501043_0003901
501 Ga0501043_0027159
502 Ga0501043_0048534
503 Ga0501047_0023874
504 Ga0501048_0017248
505 Ga0501070_0000283
506 Ga0501074_0002404
507 Ga0501074_0007556
508 Ga0501080_0050717
509 Ga0501035_0009866
510 Ga0501035_0010143
511 Ga0501035_0014964
512 Ga0501035_0030967
513 Ga0501035_0038843
514 Ga0501035_0225408
515 Ga0501044_0001176
516 Ga0501044_0002771
517 Ga0501044_0007526
518 Ga0501044_0014904
519 Ga0501044_0033727
520 nmdc:mga03n38_20795_c1
521 nmdc:mga06z11_2816_c1
522 nmdc:mga07m45_63280_c1
523 Ga0495601_0006178
524 Ga0466962_0000332
525 Ga0466962_0000908
526 2862511009
527 2547405504
528 2547409549
529 2585298860
530 2585299833
531 2616696419
532 2616899470
533 2643889072
534 2643897414
535 2643900885
536 2643944159
537 2643958127
538 2644034607
539 2644098978
540 2644114859
541 2644389394
542 2644407032
543 2644408559
544 2644431007
545 2644435820
546 2738867982
547 2768644338
548 2784587424
549 2784592328
550 2785344905
551 2785345422
552 2785346758
553 2786666649
554 2793978215
555 2804844443
556 2804848544
557 2808840631
558 2808848918
559 2808915602
560 2808915781
561 2808916016
562 2808916931
563 2808919214
564 2809230997
565 2809235958
566 2812332297
567 2812353839
568 2812477260
569 2812478877
570 2812479508
571 2812481677
572 2812483092
573 2819743214
574 2855387721
575 2862281761
576 2862288642
577 2862384708
578 2862385577
579 2862512577
580 2862514364
581 2862516223
582 2862583390
583 2862709790
584 2863406168
585 2863409155
586 2867433495
587 2873156979
588 2875393358
589 2875398404
590 2912716682
591 2912725444
592 2912727030
593 2912731167
594 2918502810
595 2919468181
596 2919473329
597 2946045794
598 2946051334
599 2946053316
600 2946071857
601 2946074625
602 2946078808
603 2947225069
604 2947226346
605 2947232737
606 2954004324
607 2954009253
608 2954681740
609 2954691184
610 2954711813
611 2954721730
612 2954740092
613 2954740642
614 2954758920
615 2954759652
616 2954760650
617 2990065343
618 2995469830
619 2997456235
620 2997600624
621 3006430859
622 3006492112
623 3006495587
624 8008489484
625 8008561624
626 8008562147
627 8008575489
628 8008580041
629 8023627464
630 8025414079
631 8025418147
632 8025528940
633 8033689684
634 8047894146
635 8048130178
636 8048365166
637 8048371163
638 8048379964
639 8048409009
640 8048410981
641 8048412032
642 8056837891

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

80

524

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
8d4t-assembly1.cif.gz_N mammalian civ with gdn bound 0.9059 32 490
8dh6-assembly1.cif.gz_a cryo-em structure of saccharomyces cerevisiae cytochrome c oxidase (complex iv) extracted in lipid nanodiscs 0.9011 33 480
8c8q-assembly1.cif.gz_A cytochrome c oxidase from schizosaccharomyces pombe 0.9003 30 502
6adq-assembly1.cif.gz_F respiratory complex ciii2civ2sod2 from mycobacterium smegmatis 0.8953 15 532
8f68-assembly1.cif.gz_A e. coli cytochrome bo3 ubiquinol oxidase monomer 0.8886 30 532
ID Description Score Start End Superfamily
af_P9WP71_20_544_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9063 25 526 1.20.210.10
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8977 28 517 1.20.210.10
af_O21042_10_509_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8972 30 487 1.20.210.10
af_Q7HP04_41_512_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8917 34 474 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8833 31 527 1.20.210.10
ID Description Score Start End GO Terms
AF-N0DWX8-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9504 306 480 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-A7UGR0-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9493 306 479 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-A0A521FXW5-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9487 309 477 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-Q5I5K9-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9479 306 440 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-B0FL58-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9472 309 440 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872

Map