F406140

General Info

Members Datasets Scaffolds Average Seq Length
321 222 642 476

Family's Representative Sequence

Representative Sequence 3300047444|Ga0495675_0003106|Ga0495675_0003106_6021_7526
Length 501
Sequence VEPDNRTTHKTKHEERKVASVTSTYAFWLAGRQERGTESFEVRHPWDDSHVGTVSVPTEAQVEEAVAAAAAVQDEFAATPAYVRAAALDHVARRLTERSEELARLITAENGKPIKWARGEVGRAASVFRWAAEEARRFNSGEGQRLDTDAGGTGRLAITRRFTRGVVLGIAPFNFPLNLVAHKVAPAIAVGAPIILKPAPATPISALVLGEILAETDLPAGSWSVLPVANDRMPALVQDPRLPVISFTGSDKVGYQIMDSVPRKHVTLELGGNAAAVVLADWSSEADLEWAATRIATFANYQGGQSCISVQRVIADASVYDRLVEKVVAKVGTQVTGDPSDDAVDVGPLVNEDAAKRVESWVDEAVAAGAQLLAGGKRDGANYAATVVSEVPAGVRLATEEVFGPVLTLTRVEGVDAAFAQVNDSKFGLQAGVFTHDVQTAFRAHRELEVGGVIIGDAPSYRADQMPYGGVKDSGVGREGVAFAMADYTYERVMVLTGLAL

Samples

Sample ID Description Type Environment
1 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
9 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
10 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
11 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
12 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
13 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
14 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
15 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
16 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
17 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
18 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
21 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
22 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
23 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
24 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
25 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
26 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
27 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
28 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
29 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
30 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
31 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
32 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
33 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
34 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
35 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
36 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
37 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
38 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
39 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
40 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
41 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
42 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
43 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
44 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
45 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
46 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
47 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
48 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
49 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
50 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
51 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
52 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
53 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
54 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
55 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
56 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
57 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
58 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
59 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
60 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
61 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
62 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
63 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
64 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
65 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
66 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
67 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
68 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
69 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
70 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
75 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
76 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
77 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
78 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
79 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
82 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
83 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
84 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
87 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
88 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
89 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
92 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
93 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
94 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
95 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
96 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
97 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
98 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
103 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
125 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
128 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
131 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
132 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
133 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
134 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
135 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
136 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
138 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
139 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
140 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
141 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
142 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
143 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
144 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
145 2643221548 Streptomyces sp. Root55 Isolate Unclassified
146 2643221578 Streptomyces sp. Root63 Isolate Unclassified
147 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
148 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
149 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
150 2643221647 Streptomyces sp. Root369 Isolate Unclassified
151 2643221670 Streptomyces sp. Root431 Isolate Unclassified
152 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
153 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
154 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
155 2643221714 Streptomyces sp. Root264 Isolate Unclassified
156 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
157 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
158 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
159 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
160 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
161 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
162 2808606448 Streptomyces sp. 193411 Isolate Unclassified
163 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
164 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
165 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
166 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
167 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
168 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
169 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
170 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
171 2862574272 Streptomyces sp. AcE210 Isolate Nodule
172 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
173 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
174 2867369537 Streptomyces sp. Z26 Isolate Unclassified
175 2867428634 Streptomyces sp. RP5T Isolate Unclassified
176 2867475112 Streptomyces sp. TM32 Isolate Unclassified
177 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
178 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
179 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
180 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
181 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
182 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
183 2891562705 Microbispora tritici MT50 Isolate Unclassified
184 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
185 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
186 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
187 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
188 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
189 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
190 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
191 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
192 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
193 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
194 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
195 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
196 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
197 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
198 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
199 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
200 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
201 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
202 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
203 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
204 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
205 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
206 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
207 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
208 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
209 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
210 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
211 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
212 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
213 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
214 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
215 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
216 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
217 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
218 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
219 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
220 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
221 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
222 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 71.96
Metatranscriptomes 1.56
Isolates 26.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.49
Nodule 0.31
Rhizoplane 0.62
Rhizosphere 77.57
Stem 0
Stem Tuber 0
Unclassified 0.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495675_0003106 3300047444 Bacteria 9975
2 rootH2_10018648 3300003320 Bacteria 3151
3 rootH1_10039454 3300003323 Bacteria 3746
4 Ga0006562J51391_1063198 3300003578 Bacteria 3333
5 Ga0006562J51391_1091581 3300003578 Bacteria 2611
6 Ga0070683_100214484 3300005329 Bacteria 1829
7 Ga0070707_100000821 3300005468 Bacteria 30820
8 Ga0068853_100038953 3300005539 Bacteria 4052
9 Ga0081540_1000420 3300005983 Bacteria 41918
10 Ga0075430_100019837 3300006846 Bacteria 5719
11 Ga0105250_10032056 3300009092 Bacteria 2111
12 Ga0105243_10259118 3300009148 Bacteria 1556
13 Ga0157375_10369983 3300013308 Bacteria 1599
14 Ga0182008_10001376 3300014497 Bacteria 16463
15 Ga0157379_10119004 3300014968 Unclassified 2376
16 Ga0182007_10000397 3300015262 Bacteria 26971
17 Ga0183367_1013 3300015688 Bacteria 334176
18 Ga0207426_1008795 3300025302 Bacteria 4043
19 Ga0207646_10000033 3300025922 Bacteria 213090
20 Ga0207639_10179320 3300026041 Bacteria 1801
21 Ga0307517_10007719 3300028786 Bacteria 15615
22 Ga0307515_10004249 3300028794 Bacteria 29735
23 Ga0307515_10140834 3300028794 Bacteria 2588
24 Ga0307511_10000330 3300030521 Bacteria 50161
25 Ga0307512_10013018 3300030522 Bacteria 7816
26 Ga0307512_10088723 3300030522 Bacteria 2168
27 Ga0307509_10008175 3300031507 Bacteria 13399
28 Ga0307509_10011473 3300031507 Bacteria 10720
29 Ga0307509_10029034 3300031507 Bacteria 6142
30 Ga0307508_10005067 3300031616 Bacteria 12654
31 Ga0307508_10036223 3300031616 Bacteria 4443
32 Ga0307514_10099320 3300031649 Bacteria 2095
33 Ga0307516_10010430 3300031730 Bacteria 10216
34 Ga0307507_10000001 3300033179 Bacteria 417520
35 Ga0307507_10010614 3300033179 Bacteria 11856
36 Ga0307507_10014762 3300033179 Bacteria 9274
37 Ga0307507_10037794 3300033179 Bacteria 4906
38 Ga0373954_0052969 3300035118 Bacteria 1907
39 Ga0373955_0005516 3300035172 Bacteria 5688
40 Ga0316574_0188097 3300035398 Bacteria 1328
41 Ga0373925_0104354 3300037068 Bacteria 2182
42 Ga0395900_0171633 3300037418 Bacteria 2207
43 Ga0395898_0010629 3300037466 Bacteria 9615
44 Ga0395898_0014979 3300037466 Bacteria 7961
45 Ga0395898_0226200 3300037466 Bacteria 1784
46 Ga0395901_0141110 3300038443 Bacteria 2532
47 Ga0451837_1177339 3300041494 Bacteria 2092
48 Ga0439448_0004566 3300042005 Bacteria 3910
49 Ga0439432_042642 3300042006 Bacteria 1434
50 Ga0439455_0004606 3300042012 Bacteria 2745
51 Ga0450903_001930 3300042138 Bacteria 3753
52 Ga0439458_0000257 3300042157 Bacteria 12914
53 Ga0466969_0003927 3300044656 Bacteria 7895
54 Ga0466969_0007562 3300044656 Bacteria 5774
55 Ga0466972_0039380 3300044658 Bacteria 2306
56 Ga0466965_0094603 3300044683 Bacteria 1523
57 Ga0466963_0033892 3300044694 Bacteria 3320
58 Ga0466964_0031501 3300044706 Bacteria 2104
59 Ga0466971_0002705 3300044719 Bacteria 7491
60 Ga0466968_0030822 3300044735 Bacteria 2223
61 Ga0466970_0010946 3300044765 Bacteria 4614
62 Ga0466970_0094499 3300044765 Bacteria 1624
63 Ga0466959_0091989 3300045049 Bacteria 2178
64 Ga0466959_0160169 3300045049 Bacteria 1582
65 Ga0495617_009015 3300046452 Bacteria 3431
66 Ga0495592_0004192 3300046454 Bacteria 10530
67 Ga0495592_0015699 3300046454 Bacteria 5746
68 Ga0495603_0000260 3300046455 Bacteria 27834
69 Ga0495603_0012425 3300046455 Bacteria 5153
70 Ga0495603_0035435 3300046455 Bacteria 2997
71 Ga0495603_0041202 3300046455 Bacteria 2761
72 Ga0495629_0001071 3300046459 Bacteria 21859
73 Ga0495629_0001509 3300046459 Bacteria 18319
74 Ga0495629_0005833 3300046459 Bacteria 9187
75 Ga0495629_0008616 3300046459 Bacteria 7509
76 Ga0495629_0017813 3300046459 Bacteria 5091
77 Ga0495629_0036526 3300046459 Bacteria 3467
78 Ga0495629_0039671 3300046459 Bacteria 3313
79 Ga0495629_0070389 3300046459 Bacteria 2441
80 Ga0495629_0074091 3300046459 Bacteria 2377
81 Ga0495629_0152231 3300046459 Bacteria 1607
82 Ga0495638_0066921 3300046460 Bacteria 2207
83 Ga0495651_0002257 3300046462 Bacteria 14893
84 Ga0495651_0003284 3300046462 Bacteria 12413
85 Ga0495651_0008712 3300046462 Bacteria 7785
86 Ga0495605_0065358 3300046474 Bacteria 1730
87 Ga0495662_0001200 3300046476 Bacteria 12793
88 Ga0495662_0009922 3300046476 Bacteria 4677
89 Ga0495662_0054179 3300046476 Bacteria 1937
90 Ga0495664_0000886 3300046477 Bacteria 15402
91 Ga0495664_0028809 3300046477 Bacteria 3244
92 Ga0495664_0117276 3300046477 Bacteria 1609
93 Ga0495585_0042566 3300046492 Bacteria 2543
94 Ga0495594_0001029 3300046499 Bacteria 14524
95 Ga0495594_0006512 3300046499 Bacteria 6008
96 Ga0495594_0012731 3300046499 Bacteria 4389
97 Ga0495607_0040246 3300046501 Bacteria 2784
98 Ga0495606_0017705 3300046507 Bacteria 5375
99 Ga0495608_0012059 3300046511 Bacteria 6007
100 Ga0495608_0016043 3300046511 Bacteria 5184
101 Ga0495618_0082696 3300046514 Bacteria 2050
102 Ga0495620_0020922 3300046515 Bacteria 3185
103 Ga0495628_0013760 3300046516 Bacteria 6799
104 Ga0495628_0031290 3300046516 Bacteria 4304
105 Ga0495628_0092830 3300046516 Bacteria 2334
106 Ga0495631_0014024 3300046518 Bacteria 3874
107 Ga0495632_0064814 3300046519 Bacteria 1766
108 Ga0495643_0001114 3300046522 Bacteria 26618
109 Ga0495643_0021319 3300046522 Bacteria 3719
110 Ga0495666_0035288 3300046526 Bacteria 2438
111 Ga0495665_0002581 3300046531 Bacteria 9784
112 Ga0495640_0003027 3300046533 Bacteria 13530
113 Ga0495640_0015564 3300046533 Bacteria 5720
114 Ga0495640_0029115 3300046533 Bacteria 3969
115 Ga0495586_0005124 3300046535 Bacteria 7014
116 Ga0495586_0008208 3300046535 Bacteria 5566
117 Ga0495587_0001132 3300046536 Bacteria 17447
118 Ga0495645_0033371 3300046543 Bacteria 3755
119 Ga0495622_0011527 3300046557 Bacteria 4085
120 Ga0495622_0040351 3300046557 Bacteria 2172
121 Ga0495633_0044826 3300046558 Bacteria 2095
122 Ga0495668_0052606 3300046616 Bacteria 2253
123 Ga0495634_0003088 3300046642 Bacteria 13543
124 Ga0495634_0007253 3300046642 Bacteria 8355
125 Ga0495634_0034590 3300046642 Bacteria 3466
126 Ga0495634_0124911 3300046642 Bacteria 1645
127 Ga0495611_0002083 3300046648 Bacteria 9401
128 Ga0495625_0051591 3300046660 Bacteria 2948
129 Ga0495635_0001252 3300046663 Bacteria 16998
130 Ga0495635_0017952 3300046663 Bacteria 4941
131 Ga0495635_0049047 3300046663 Bacteria 2910
132 Ga0495588_0042387 3300046674 Bacteria 2326
133 Ga0495657_0004010 3300046675 Bacteria 11808
134 Ga0495657_0005534 3300046675 Bacteria 9980
135 Ga0495657_0006357 3300046675 Bacteria 9250
136 Ga0495599_0012089 3300046678 Bacteria 5312
137 Ga0495599_0014285 3300046678 Bacteria 4917
138 Ga0495623_0004617 3300046679 Bacteria 9050
139 Ga0495623_0055399 3300046679 Bacteria 2499
140 Ga0495646_0000654 3300046680 Bacteria 18980
141 Ga0495658_0059797 3300046683 Bacteria 2183
142 Ga0495613_0003372 3300046689 Bacteria 11937
143 Ga0495613_0005843 3300046689 Bacteria 9204
144 Ga0495613_0010193 3300046689 Bacteria 6980
145 Ga0495613_0011019 3300046689 Bacteria 6713
146 Ga0495613_0028598 3300046689 Bacteria 4146
147 Ga0495613_0065181 3300046689 Bacteria 2662
148 Ga0495624_0003775 3300046690 Bacteria 11195
149 Ga0495624_0039512 3300046690 Bacteria 3024
150 Ga0495670_0038013 3300046691 Bacteria 2399
151 Ga0495670_0085274 3300046691 Bacteria 1612
152 Ga0495671_0004066 3300046692 Bacteria 8831
153 Ga0495589_0071300 3300046794 Bacteria 1698
154 Ga0495589_0079068 3300046794 Bacteria 1600
155 Ga0495600_0002397 3300046809 Bacteria 10738
156 Ga0495600_0017184 3300046809 Bacteria 4598
157 Ga0495660_0014170 3300046810 Bacteria 4617
158 Ga0495581_0002426 3300047315 Bacteria 10532
159 Ga0495581_0003111 3300047315 Bacteria 9502
160 Ga0495581_0071032 3300047315 Bacteria 2014
161 Ga0495604_0002161 3300047317 Bacteria 15789
162 Ga0495604_0012042 3300047317 Bacteria 6875
163 Ga0495604_0034815 3300047317 Bacteria 3982
164 Ga0495604_0040172 3300047317 Bacteria 3674
165 Ga0495604_0132569 3300047317 Bacteria 1789
166 Ga0495674_0006907 3300047319 Bacteria 10858
167 Ga0495676_0004933 3300047321 Bacteria 12236
168 Ga0495676_0005282 3300047321 Bacteria 11822
169 Ga0495676_0010194 3300047321 Bacteria 8534
170 Ga0495680_0018973 3300047322 Bacteria 5823
171 Ga0495687_001298 3300047443 Bacteria 23461
172 Ga0495687_002153 3300047443 Bacteria 16437
173 Ga0495675_0002349 3300047444 Bacteria 11289
174 Ga0495675_0024005 3300047444 Bacteria 3885
175 Ga0495681_0001153 3300047470 Bacteria 20012
176 Ga0495681_0020191 3300047470 Bacteria 3619
177 Ga0495686_0056990 3300047472 Bacteria 2440
178 Ga0495593_0001513 3300047673 Bacteria 13673
179 Ga0495593_0009261 3300047673 Bacteria 5713
180 Ga0495593_0014182 3300047673 Bacteria 4534
181 Ga0495602_0096231 3300048088 Bacteria 2442
182 Ga0495602_0137514 3300048088 Bacteria 1938
183 Ga0495614_0001329 3300048089 Bacteria 10659
184 Ga0495614_0006252 3300048089 Bacteria 5353
185 Ga0495614_0031164 3300048089 Bacteria 2295
186 Ga0496109_0238634 3300048912 Bacteria 1711
187 Ga0501306_005046 3300049127 Bacteria 1499
188 Ga0501323_002586 3300049539 Bacteria 1770
189 Ga0501323_002938 3300049539 Bacteria 1700
190 Ga0501031_0021372 3300049568 Bacteria 4219
191 Ga0501031_0143482 3300049568 Bacteria 1560
192 Ga0501033_0019869 3300049570 Bacteria 5076
193 Ga0501033_0027614 3300049570 Bacteria 4267
194 Ga0501034_0002969 3300049571 Bacteria 19649
195 Ga0501034_0286094 3300049571 Bacteria 1588
196 Ga0501036_0007136 3300049572 Bacteria 9098
197 Ga0501036_0011785 3300049572 Bacteria 7245
198 Ga0501038_0004307 3300049574 Bacteria 13229
199 Ga0501039_0017687 3300049575 Bacteria 5469
200 Ga0501039_0054323 3300049575 Bacteria 3100
201 Ga0501043_0013857 3300049579 Bacteria 6309
202 Ga0501043_0103810 3300049579 Bacteria 2233
203 Ga0501043_0201547 3300049579 Bacteria 1544
204 Ga0501046_0068731 3300049580 Bacteria 2757
205 Ga0501047_0000577 3300049581 Bacteria 39081
206 Ga0501047_0008618 3300049581 Bacteria 9631
207 Ga0501047_0026744 3300049581 Bacteria 5553
208 Ga0501047_0081654 3300049581 Bacteria 3107
209 Ga0501047_0131217 3300049581 Bacteria 2386
210 Ga0501048_0002104 3300049582 Bacteria 15177
211 Ga0501068_0011260 3300049584 Bacteria 5045
212 Ga0501068_0033674 3300049584 Bacteria 3052
213 Ga0501070_0011300 3300049586 Bacteria 7544
214 Ga0501072_0000779 3300049588 Bacteria 23322
215 Ga0501083_0001149 3300049744 Bacteria 17806
216 Ga0501035_0002230 3300049822 Bacteria 19220
217 Ga0501035_0055047 3300049822 Bacteria 3552
218 Ga0501044_0002866 3300049823 Bacteria 19638
219 Ga0501044_0003797 3300049823 Bacteria 16955
220 Ga0501044_0026183 3300049823 Bacteria 6176
221 Ga0501044_0029286 3300049823 Bacteria 5806
222 Ga0501044_0152454 3300049823 Bacteria 2293
223 Ga0501045_0028484 3300049824 Bacteria 4029
224 nmdc:mga03n38_20179_c1 3300050490 Bacteria 2662
225 nmdc:mga0qj67_287_c1 3300050509 Bacteria 35118
226 Ga0495601_0003135 3300053077 Bacteria 9458
227 Ga0495601_0083636 3300053077 Bacteria 2050
228 Ga0500583_0119953 3300053092 Bacteria 1301
229 Ga0500640_006040 3300053095 Bacteria 4587
230 Ga0500569_001559 3300053109 Bacteria 4355
231 Ga0500658_0002109 3300053134 Bacteria 7735
232 Ga0500573_0043272 3300053140 Bacteria 2599
233 Ga0500587_000625 3300053739 Bacteria 4455
234 Ga0501084_0005162 3300054114 Bacteria 10681
235 Ga0466962_0007387 3300061719 Bacteria 5271
236 Ga0466962_0008382 3300061719 Bacteria 4954
237 2554255979 2554235005 Bacteria 6457341
238 2585297399 2582581312 Bacteria 7308206
239 2585307823 2582581313 Bacteria 10042643
240 2585316802 2582581314 Bacteria 11452267
241 2616700087 2616644814 Bacteria 11555299
242 2616903732 2616644941 Bacteria 8510691
243 2643761561 2643221548 Bacteria 8053412
244 2643899329 2643221578 Bacteria 9213798
245 2643943714 2643221587 Bacteria 7586415
246 2644016304 2643221601 Bacteria 7493239
247 2644177135 2643221631 Bacteria 8168043
248 2644269633 2643221647 Bacteria 10741251
249 2644387196 2643221670 Bacteria 6497041
250 2644406936 2643221673 Bacteria 9196637
251 2644434027 2643221677 Bacteria 7584031
252 2644458737 2643221682 Bacteria 6743283
253 2644629885 2643221714 Bacteria 9015452
254 2768647126 2767802112 Bacteria 6465194
255 2784590680 2784132148 Bacteria 8627943
256 2785371848 2784746768 Bacteria 10036182
257 2786672961 2786546132 Bacteria 10419719
258 2793976732 2791355406 Bacteria 11364898
259 2804848212 2802429296 Bacteria 7227771
260 2809234368 2808606448 Bacteria 8656184
261 2811844093 2808606982 Bacteria 7791042
262 2819698907 2818991463 Bacteria 7948711
263 2819740426 2818991472 Bacteria 10089953
264 2856748504 2856741275 Bacteria 8096094
265 2862181821 2862178590 Bacteria 8583590
266 2862284294 2862281513 Bacteria 9621493
267 2862295373 2862290372 Bacteria 7471434
268 2862514299 2862507626 Bacteria 9425308
269 2862577187 2862574272 Bacteria 10567477
270 2862710986 2862705112 Bacteria 6563286
271 2867350919 2867346516 Bacteria 7608576
272 2867374119 2867369537 Bacteria 6501581
273 2867428812 2867428634 Bacteria 9590268
274 2867477161 2867475112 Bacteria 6909112
275 2873153778 2873151551 Bacteria 8625867
276 2873321477 2873314349 Bacteria 8512634
277 2875397027 2875391855 Bacteria 7600475
278 2877678733 2877676314 Bacteria 9512378
279 2891395906 2891395885 Bacteria 9251614
280 2891560935 2891554331 Bacteria 8812224
281 2891569130 2891562705 Bacteria 8039471
282 2912717298 2912715099 Bacteria 9460473
283 2912763087 2912757875 Bacteria 7940295
284 2918506822 2918501144 Bacteria 8668083
285 2935396028 2935390628 Bacteria 7043367
286 2946047527 2946045630 Bacteria 8527308
287 2954005836 2954002825 Bacteria 9173742
288 2954383704 2954380949 Bacteria 10050426
289 2954679270 2954673503 Bacteria 9685905
290 2954684885 2954682443 Bacteria 9862841
291 2954694504 2954691527 Bacteria 10720516
292 2954713993 2954711539 Bacteria 10867210
293 2954723962 2954721474 Bacteria 10456478
294 2954737876 2954731030 Bacteria 10243860
295 2954742859 2954740390 Bacteria 10229294
296 2954756730 2954749733 Bacteria 10366972
297 2954761818 2954759201 Bacteria 9358192
298 2966600565 2966598605 Bacteria 7676064
299 2990062414 2990059506 Bacteria 9321252
300 2990088388 2990088156 Bacteria 6657676
301 2995468313 2995463766 Bacteria 8577691
302 3006324732 3006321560 Bacteria 8247479
303 3006399021 3006393351 Bacteria 6615579
304 3006426498 3006425503 Bacteria 6491253
305 3006490064 3006486233 Bacteria 8157040
306 8008487280 8008485437 Bacteria 7198341
307 8008576852 8008574985 Bacteria 7815457
308 8023625672 8023623736 Bacteria 8593882
309 8025414249 8025413630 Bacteria 7014048
310 8025484236 8025478263 Bacteria 8209203
311 8025526287 8025524527 Bacteria 7197316
312 8025532704 8025530807 Bacteria 8495698
313 8047895783 8047893842 Bacteria 11723082
314 8048129042 8048127548 Bacteria 11053136
315 8048131603 8048127548 Bacteria 11053136
316 8048363151 8048356638 Bacteria 11044339
317 8048372807 8048369669 Bacteria 11666822
318 8048381741 8048379754 Bacteria 11877923
319 8054163147 8054160619 Bacteria 7783213
320 8055173506 8055172936 Bacteria 9305943
321 8056063021 8056060235 Bacteria 7259403
322 Ga0495675_0003106
323 rootH2_10018648
324 rootH1_10039454
325 Ga0006562J51391_1063198
326 Ga0006562J51391_1091581
327 Ga0070683_100214484
328 Ga0070707_100000821
329 Ga0068853_100038953
330 Ga0081540_1000420
331 Ga0075430_100019837
332 Ga0105250_10032056
333 Ga0105243_10259118
334 Ga0157375_10369983
335 Ga0182008_10001376
336 Ga0157379_10119004
337 Ga0182007_10000397
338 Ga0183367_1013
339 Ga0207426_1008795
340 Ga0207646_10000033
341 Ga0207639_10179320
342 Ga0307517_10007719
343 Ga0307515_10004249
344 Ga0307515_10140834
345 Ga0307511_10000330
346 Ga0307512_10013018
347 Ga0307512_10088723
348 Ga0307509_10008175
349 Ga0307509_10011473
350 Ga0307509_10029034
351 Ga0307508_10005067
352 Ga0307508_10036223
353 Ga0307514_10099320
354 Ga0307516_10010430
355 Ga0307507_10000001
356 Ga0307507_10010614
357 Ga0307507_10014762
358 Ga0307507_10037794
359 Ga0373954_0052969
360 Ga0373955_0005516
361 Ga0316574_0188097
362 Ga0373925_0104354
363 Ga0395900_0171633
364 Ga0395898_0010629
365 Ga0395898_0014979
366 Ga0395898_0226200
367 Ga0395901_0141110
368 Ga0451837_1177339
369 Ga0439448_0004566
370 Ga0439432_042642
371 Ga0439455_0004606
372 Ga0450903_001930
373 Ga0439458_0000257
374 Ga0466969_0003927
375 Ga0466969_0007562
376 Ga0466972_0039380
377 Ga0466965_0094603
378 Ga0466963_0033892
379 Ga0466964_0031501
380 Ga0466971_0002705
381 Ga0466968_0030822
382 Ga0466970_0010946
383 Ga0466970_0094499
384 Ga0466959_0091989
385 Ga0466959_0160169
386 Ga0495617_009015
387 Ga0495592_0004192
388 Ga0495592_0015699
389 Ga0495603_0000260
390 Ga0495603_0012425
391 Ga0495603_0035435
392 Ga0495603_0041202
393 Ga0495629_0001071
394 Ga0495629_0001509
395 Ga0495629_0005833
396 Ga0495629_0008616
397 Ga0495629_0017813
398 Ga0495629_0036526
399 Ga0495629_0039671
400 Ga0495629_0070389
401 Ga0495629_0074091
402 Ga0495629_0152231
403 Ga0495638_0066921
404 Ga0495651_0002257
405 Ga0495651_0003284
406 Ga0495651_0008712
407 Ga0495605_0065358
408 Ga0495662_0001200
409 Ga0495662_0009922
410 Ga0495662_0054179
411 Ga0495664_0000886
412 Ga0495664_0028809
413 Ga0495664_0117276
414 Ga0495585_0042566
415 Ga0495594_0001029
416 Ga0495594_0006512
417 Ga0495594_0012731
418 Ga0495607_0040246
419 Ga0495606_0017705
420 Ga0495608_0012059
421 Ga0495608_0016043
422 Ga0495618_0082696
423 Ga0495620_0020922
424 Ga0495628_0013760
425 Ga0495628_0031290
426 Ga0495628_0092830
427 Ga0495631_0014024
428 Ga0495632_0064814
429 Ga0495643_0001114
430 Ga0495643_0021319
431 Ga0495666_0035288
432 Ga0495665_0002581
433 Ga0495640_0003027
434 Ga0495640_0015564
435 Ga0495640_0029115
436 Ga0495586_0005124
437 Ga0495586_0008208
438 Ga0495587_0001132
439 Ga0495645_0033371
440 Ga0495622_0011527
441 Ga0495622_0040351
442 Ga0495633_0044826
443 Ga0495668_0052606
444 Ga0495634_0003088
445 Ga0495634_0007253
446 Ga0495634_0034590
447 Ga0495634_0124911
448 Ga0495611_0002083
449 Ga0495625_0051591
450 Ga0495635_0001252
451 Ga0495635_0017952
452 Ga0495635_0049047
453 Ga0495588_0042387
454 Ga0495657_0004010
455 Ga0495657_0005534
456 Ga0495657_0006357
457 Ga0495599_0012089
458 Ga0495599_0014285
459 Ga0495623_0004617
460 Ga0495623_0055399
461 Ga0495646_0000654
462 Ga0495658_0059797
463 Ga0495613_0003372
464 Ga0495613_0005843
465 Ga0495613_0010193
466 Ga0495613_0011019
467 Ga0495613_0028598
468 Ga0495613_0065181
469 Ga0495624_0003775
470 Ga0495624_0039512
471 Ga0495670_0038013
472 Ga0495670_0085274
473 Ga0495671_0004066
474 Ga0495589_0071300
475 Ga0495589_0079068
476 Ga0495600_0002397
477 Ga0495600_0017184
478 Ga0495660_0014170
479 Ga0495581_0002426
480 Ga0495581_0003111
481 Ga0495581_0071032
482 Ga0495604_0002161
483 Ga0495604_0012042
484 Ga0495604_0034815
485 Ga0495604_0040172
486 Ga0495604_0132569
487 Ga0495674_0006907
488 Ga0495676_0004933
489 Ga0495676_0005282
490 Ga0495676_0010194
491 Ga0495680_0018973
492 Ga0495687_001298
493 Ga0495687_002153
494 Ga0495675_0002349
495 Ga0495675_0024005
496 Ga0495681_0001153
497 Ga0495681_0020191
498 Ga0495686_0056990
499 Ga0495593_0001513
500 Ga0495593_0009261
501 Ga0495593_0014182
502 Ga0495602_0096231
503 Ga0495602_0137514
504 Ga0495614_0001329
505 Ga0495614_0006252
506 Ga0495614_0031164
507 Ga0496109_0238634
508 Ga0501306_005046
509 Ga0501323_002586
510 Ga0501323_002938
511 Ga0501031_0021372
512 Ga0501031_0143482
513 Ga0501033_0019869
514 Ga0501033_0027614
515 Ga0501034_0002969
516 Ga0501034_0286094
517 Ga0501036_0007136
518 Ga0501036_0011785
519 Ga0501038_0004307
520 Ga0501039_0017687
521 Ga0501039_0054323
522 Ga0501043_0013857
523 Ga0501043_0103810
524 Ga0501043_0201547
525 Ga0501046_0068731
526 Ga0501047_0000577
527 Ga0501047_0008618
528 Ga0501047_0026744
529 Ga0501047_0081654
530 Ga0501047_0131217
531 Ga0501048_0002104
532 Ga0501068_0011260
533 Ga0501068_0033674
534 Ga0501070_0011300
535 Ga0501072_0000779
536 Ga0501083_0001149
537 Ga0501035_0002230
538 Ga0501035_0055047
539 Ga0501044_0002866
540 Ga0501044_0003797
541 Ga0501044_0026183
542 Ga0501044_0029286
543 Ga0501044_0152454
544 Ga0501045_0028484
545 nmdc:mga03n38_20179_c1
546 nmdc:mga0qj67_287_c1
547 Ga0495601_0003135
548 Ga0495601_0083636
549 Ga0500583_0119953
550 Ga0500640_006040
551 Ga0500569_001559
552 Ga0500658_0002109
553 Ga0500573_0043272
554 Ga0500587_000625
555 Ga0501084_0005162
556 Ga0466962_0007387
557 Ga0466962_0008382
558 2554255979
559 2585297399
560 2585307823
561 2585316802
562 2616700087
563 2616903732
564 2643761561
565 2643899329
566 2643943714
567 2644016304
568 2644177135
569 2644269633
570 2644387196
571 2644406936
572 2644434027
573 2644458737
574 2644629885
575 2768647126
576 2784590680
577 2785371848
578 2786672961
579 2793976732
580 2804848212
581 2809234368
582 2811844093
583 2819698907
584 2819740426
585 2856748504
586 2862181821
587 2862284294
588 2862295373
589 2862514299
590 2862577187
591 2862710986
592 2867350919
593 2867374119
594 2867428812
595 2867477161
596 2873153778
597 2873321477
598 2875397027
599 2877678733
600 2891395906
601 2891560935
602 2891569130
603 2912717298
604 2912763087
605 2918506822
606 2935396028
607 2946047527
608 2954005836
609 2954383704
610 2954679270
611 2954684885
612 2954694504
613 2954713993
614 2954723962
615 2954737876
616 2954742859
617 2954756730
618 2954761818
619 2966600565
620 2990062414
621 2990088388
622 2995468313
623 3006324732
624 3006399021
625 3006426498
626 3006490064
627 8008487280
628 8008576852
629 8023625672
630 8025414249
631 8025484236
632 8025526287
633 8025532704
634 8047895783
635 8048129042
636 8048131603
637 8048363151
638 8048372807
639 8048381741
640 8054163147
641 8055173506
642 8056063021

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

31

494

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5jry-assembly1.cif.gz_A crystal structure of a nad-dependent aldehyde dehydrogenase from burkholderia multivorans in covalent complex with nad 0.9758 1 397
5kf0-assembly1.cif.gz_A crystal structure of an aldedhyde dehydrogenase from burkholderia vietnamiensis 0.9749 1 397
5j6b-assembly1.cif.gz_D crystal structure of aldehyde dehydrogenase from burkholderia thailandensis in covelent complex with nadph 0.9742 1 397
5mz8-assembly1.cif.gz_D crystal structure of aldehyde dehydrogenase 21 (aldh21) from physcomitrella patens in complex with the reaction product succinate 0.9674 2 400
5jry-assembly1.cif.gz_A crystal structure of a nad-dependent aldehyde dehydrogenase from burkholderia multivorans in covalent complex with nad 0.9543 1 397
ID Description Score Start End Superfamily
5j6bB02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9827 172 363 3.40.309.10
5j6bB02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9776 172 363 3.40.309.10
5mz5B02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9743 172 363 3.40.309.10
5mz5B02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9693 172 363 3.40.309.10
af_Q55CJ9_265_456_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9688 175 363 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A4U5W939-F1-model_v4 Aldehyde dehydrogenase family protein 0.9887 2 401 GO:0008911
GO:0016020
AF-A0A3A0B2X3-F1-model_v4 Aldehyde dehydrogenase 0.986 194 390 GO:0008911
AF-A0A4U5W939-F1-model_v4 Aldehyde dehydrogenase family protein 0.9814 2 401 GO:0008911
GO:0016020
AF-A0A5M4DBJ8-F1-model_v4 Aldehyde dehydrogenase family protein 0.9772 126 394 GO:0008911
AF-A0A0K2RK11-F1-model_v4 Putative aldehyde-dehydrogenase-like protein y4uC 0.9771 94 370 GO:0008911

Map