F403672

General Info

Members Datasets Scaffolds Average Seq Length
316 257 632 431

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10219772|Ga0105239_102197722
Length 489
Sequence VSRDTQMRGECWPLAAFYDYDPVKKKADIGSNFLKRECVRASTWHWGRTVMSFEQRSVADLRQDEYRILHEAELRDYLAEVPAVAVRLGGTPASWSIIEVGDGNLNLVFIVKGAAGGVAVKQALPYVRLVGESWPLPLSRSHYEYLALTHQARLAPGLVPDVLHHNEGLALVVMELIEPHVIMRKGLIAGALYPNFVGDIATFMARTLFFSSDLALPAARKKEAIAAFAGNHALCKITEDLIFTDPYRVAEQNRWTQPWLDATAATFREDLDLHAAVSRLKLKFLNAPEALIHGDLHTGSIMVTEDSTIVIDPEFAFYGPMGFDIGAVIANLLMAYLASAGHEKSPGGRRVFEVWLLETIENVWNEFSHEFLELWRTEGHGDAYPLTLFPGAAGAARLEAERQAYMARLFGDTVGFAAAKIIRRILGLAHNADFELIEDAKQRAMCEARSLRLARAMMVETGSFPTIGAVTKAAREARDWQPQFEEDGG

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
52 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
80 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
81 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
89 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
90 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
91 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
92 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
93 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
94 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
96 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
106 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
111 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
112 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
113 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
114 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
115 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
120 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
121 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
122 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
127 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
134 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
135 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
140 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
141 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
142 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
146 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
153 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
154 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
155 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
156 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
161 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
162 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
163 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
164 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
165 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
166 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
167 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
168 3300053115 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 endosphere Metagenome Endosphere
169 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
170 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
173 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
174 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
175 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
176 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
177 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
178 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
179 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
180 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
181 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
182 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
183 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
184 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
185 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
186 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
187 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
188 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
189 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
190 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
191 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
192 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
193 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
194 2791355199
195 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
196 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
197 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
198 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
199 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
200 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
201 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
202 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
203 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
204 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
205 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
206 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
207 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
208 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
209 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
210 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
211 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
212 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
213 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
214 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
215 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
216 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
217 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
218 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
219 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
220 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
221 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
222 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
223 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
224 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
225 2906610324
226 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
227 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
228 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
229 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
230 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
231 2922425934
232 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
233 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
234 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
235 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
236 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
237 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
238 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
239 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
240 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
241 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
242 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
243 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
244 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
245 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
246 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
247 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
248 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
249 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
250 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
251 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
252 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
253 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
254 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
255 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
256 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
257 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 75.4
Metatranscriptomes 0.32
Isolates 24.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.61
Nodule 15.82
Rhizoplane 1.58
Rhizosphere 51.9
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10219772 3300010375 Bacteria 2131
2 JGI25160J50197_1000688 3300003354 Bacteria 18717
3 Ga0055531_10002008 3300003794 Bacteria 14126
4 Ga0065165_1002264 3300005262 Bacteria 16997
5 Ga0070670_100103690 3300005331 Bacteria 2450
6 Ga0068869_100072135 3300005334 Bacteria 2558
7 Ga0068869_100139063 3300005334 Bacteria 1873
8 Ga0070680_100010938 3300005336 Bacteria 7013
9 Ga0068868_100018772 3300005338 Bacteria 5172
10 Ga0068868_100119611 3300005338 Bacteria 2148
11 Ga0070668_100035918 3300005347 Bacteria 3781
12 Ga0070671_100128148 3300005355 Bacteria 2137
13 Ga0070667_100263305 3300005367 Bacteria 1544
14 Ga0070709_10005193 3300005434 Bacteria 7044
15 Ga0070709_10006315 3300005434 Bacteria 6454
16 Ga0070714_100116042 3300005435 Bacteria 2377
17 Ga0070710_10001905 3300005437 Bacteria 9874
18 Ga0070710_10009627 3300005437 Bacteria 4731
19 Ga0070711_100001657 3300005439 Bacteria 12319
20 Ga0070663_100069468 3300005455 Bacteria 2559
21 Ga0070663_100133669 3300005455 Bacteria 1887
22 Ga0070663_100150776 3300005455 Bacteria 1782
23 Ga0070678_100028625 3300005456 Bacteria 3803
24 Ga0070662_100053676 3300005457 Bacteria 2918
25 Ga0070681_10008846 3300005458 Bacteria 9892
26 Ga0070681_10031130 3300005458 Bacteria 5355
27 Ga0068867_100090421 3300005459 Bacteria 2322
28 Ga0070679_100005046 3300005530 Bacteria 12185
29 Ga0068853_100179788 3300005539 Bacteria 1918
30 Ga0068853_100226104 3300005539 Bacteria 1710
31 Ga0070665_100022409 3300005548 Bacteria 6356
32 Ga0070665_100132040 3300005548 Bacteria 2499
33 Ga0068855_100090316 3300005563 Bacteria 3535
34 Ga0068854_100011067 3300005578 Bacteria 5856
35 Ga0068856_100000206 3300005614 Bacteria 63167
36 Ga0068859_100169852 3300005617 Bacteria 2261
37 Ga0068864_100010493 3300005618 Bacteria 7655
38 Ga0068858_100132231 3300005842 Bacteria 2340
39 Ga0068860_100018505 3300005843 Bacteria 6775
40 Ga0068862_100046924 3300005844 Bacteria 3685
41 Ga0081455_10009281 3300005937 Bacteria 10131
42 Ga0081455_10009559 3300005937 Bacteria 9958
43 Ga0081455_10032712 3300005937 Bacteria 4684
44 Ga0081540_1004850 3300005983 Bacteria 10136
45 Ga0081540_1004926 3300005983 Bacteria 10050
46 Ga0081540_1012609 3300005983 Bacteria 5548
47 Ga0081540_1014738 3300005983 Bacteria 4989
48 Ga0081540_1019543 3300005983 Bacteria 4110
49 Ga0081540_1026736 3300005983 Bacteria 3286
50 Ga0081540_1028969 3300005983 Bacteria 3096
51 Ga0081539_10071780 3300005985 Bacteria 1853
52 Ga0070717_10028591 3300006028 Bacteria 4464
53 Ga0075365_10039041 3300006038 Bacteria 3089
54 Ga0075363_100005212 3300006048 Bacteria 5757
55 Ga0070712_100004673 3300006175 Bacteria 8469
56 Ga0070712_100081277 3300006175 Bacteria 2348
57 Ga0075367_10013817 3300006178 Bacteria 4355
58 Ga0075370_10008490 3300006353 Bacteria 5288
59 Ga0097620_100169850 3300006931 Bacteria 2261
60 Ga0099823_1057222 3300006944 Bacteria 2148
61 Ga0111539_10188143 3300009094 Bacteria 2410
62 Ga0111539_10407878 3300009094 Bacteria 1583
63 Ga0105247_10009618 3300009101 Bacteria 5867
64 Ga0105247_10032470 3300009101 Bacteria 3173
65 Ga0105248_10075136 3300009177 Bacteria 3798
66 Ga0105237_10050647 3300009545 Bacteria 4173
67 Ga0105249_10039465 3300009553 Bacteria 4287
68 Ga0105239_10223698 3300010375 Bacteria 2111
69 Ga0163163_10039710 3300014325 Bacteria 4595
70 Ga0163163_10180822 3300014325 Bacteria 2156
71 Ga0157380_10029440 3300014326 Bacteria 4197
72 Ga0157379_10087069 3300014968 Bacteria 2801
73 Ga0213872_10010414 3300021361 Bacteria 4427
74 Ga0213872_10016147 3300021361 Bacteria 3467
75 Ga0209148_1000155 3300025254 Bacteria 143807
76 Ga0209233_1009015 3300025261 Bacteria 3053
77 Ga0209455_1002054 3300025272 Bacteria 8140
78 Ga0209758_1000021 3300025297 Bacteria 697691
79 Ga0209758_1003773 3300025297 Bacteria 13376
80 Ga0209758_1041868 3300025297 Bacteria 1706
81 Ga0209256_1006118 3300025299 Bacteria 6531
82 Ga0207426_1000577 3300025302 Bacteria 49128
83 Ga0209257_1001692 3300025304 Bacteria 24767
84 Ga0207692_10004221 3300025898 Bacteria 5679
85 Ga0207699_10005494 3300025906 Bacteria 6070
86 Ga0207707_10035720 3300025912 Bacteria 4346
87 Ga0207707_10260110 3300025912 Bacteria 1506
88 Ga0207693_10009758 3300025915 Bacteria 7816
89 Ga0207693_10123355 3300025915 Bacteria 2035
90 Ga0207652_10059049 3300025921 Bacteria 3306
91 Ga0207652_10077071 3300025921 Bacteria 2908
92 Ga0207709_10014780 3300025935 Bacteria 4316
93 Ga0207711_10232127 3300025941 Bacteria 1690
94 Ga0207689_10032149 3300025942 Bacteria 4365
95 Ga0207679_10150690 3300025945 Bacteria 1892
96 Ga0207667_10105498 3300025949 Bacteria 2907
97 Ga0207668_10016121 3300025972 Bacteria 4657
98 Ga0207703_10071585 3300026035 Bacteria 2864
99 Ga0207639_10061783 3300026041 Bacteria 2894
100 Ga0207639_10155216 3300026041 Bacteria 1922
101 Ga0207678_10032013 3300026067 Bacteria 4584
102 Ga0207678_10068567 3300026067 Bacteria 3043
103 Ga0207702_10000075 3300026078 Bacteria 112303
104 Ga0207641_10068567 3300026088 Bacteria 3042
105 Ga0207648_10040321 3300026089 Bacteria 4104
106 Ga0207676_10271152 3300026095 Bacteria 1537
107 Ga0207675_100026900 3300026118 Bacteria 5354
108 Ga0207683_10017697 3300026121 Bacteria 6077
109 Ga0209389_1000117 3300027296 Bacteria 71506
110 Ga0209489_109135 3300027361 Bacteria 12644
111 Ga0209700_100021 3300027363 Bacteria 230859
112 Ga0268266_10017447 3300028379 Bacteria 6122
113 Ga0268266_10085986 3300028379 Bacteria 2748
114 Ga0268266_10213170 3300028379 Bacteria 1772
115 Ga0268265_10198717 3300028380 Bacteria 1737
116 Ga0268264_10000022 3300028381 Bacteria 476624
117 Ga0307509_10029592 3300031507 Bacteria 6075
118 Ga0307508_10000038 3300031616 Bacteria 150186
119 Ga0307516_10054849 3300031730 Bacteria 3893
120 Ga0307510_10043779 3300033180 Bacteria 4860
121 Ga0373953_0000391 3300035117 Bacteria 11920
122 Ga0373954_0000035 3300035118 Bacteria 51266
123 Ga0373957_0000626 3300035120 Bacteria 9019
124 Ga0373955_0001026 3300035172 Bacteria 11850
125 Ga0373955_0043580 3300035172 Bacteria 2414
126 Ga0373924_0002860 3300035410 Bacteria 5850
127 Ga0373935_0000256 3300035692 Bacteria 26305
128 Ga0373927_0005857 3300035695 Bacteria 8428
129 Ga0373927_0010055 3300035695 Bacteria 6334
130 Ga0373947_0041937 3300035725 Bacteria 2730
131 Ga0373947_0070431 3300035725 Bacteria 2143
132 Ga0373937_0000118 3300036401 Bacteria 75902
133 Ga0373937_0035203 3300036401 Bacteria 4556
134 Ga0372808_002641 3300036459 Bacteria 2096
135 Ga0373925_0021009 3300037068 Bacteria 4757
136 Ga0436365_1386710 3300039437 Bacteria 2521
137 Ga0436365_1392220 3300039437 Bacteria 2810
138 Ga0436361_1176672 3300039447 Bacteria 5803
139 Ga0436363_0824288 3300039450 Bacteria 11530
140 Ga0436363_1059412 3300039450 Bacteria 2710
141 Ga0466972_0074170 3300044658 Bacteria 1621
142 Ga0466967_0188677 3300045976 Bacteria 1947
143 Ga0495592_0000649 3300046454 Bacteria 24123
144 Ga0495603_0000027 3300046455 Bacteria 61238
145 Ga0495603_0057738 3300046455 Bacteria 2296
146 Ga0495629_0000290 3300046459 Bacteria 43459
147 Ga0495629_0120578 3300046459 Bacteria 1827
148 Ga0495641_0004283 3300046461 Bacteria 10166
149 Ga0495653_0000161 3300046463 Bacteria 55322
150 Ga0495580_0000610 3300046472 Bacteria 30234
151 Ga0495582_0000157 3300046473 Bacteria 36665
152 Ga0495639_0000048 3300046475 Bacteria 53257
153 Ga0495662_0000505 3300046476 Bacteria 17752
154 Ga0495594_0000279 3300046499 Bacteria 25038
155 Ga0495606_0032910 3300046507 Bacteria 3584
156 Ga0495630_0000846 3300046517 Bacteria 21588
157 Ga0495648_0044549 3300046524 Bacteria 2769
158 Ga0495652_0023114 3300046529 Bacteria 5512
159 Ga0495665_0000165 3300046531 Bacteria 33325
160 Ga0495640_0002246 3300046533 Bacteria 15480
161 Ga0495597_0027435 3300046542 Bacteria 2611
162 Ga0495622_0002823 3300046557 Bacteria 8290
163 Ga0495634_0001002 3300046642 Bacteria 26604
164 Ga0495634_0002287 3300046642 Bacteria 16031
165 Ga0495625_0078166 3300046660 Bacteria 2310
166 Ga0495635_0062681 3300046663 Bacteria 2553
167 Ga0495659_0037669 3300046664 Bacteria 1714
168 Ga0495588_0035611 3300046674 Bacteria 2523
169 Ga0495588_0038161 3300046674 Bacteria 2443
170 Ga0495599_0000253 3300046678 Bacteria 33822
171 Ga0495646_0003057 3300046680 Bacteria 10369
172 Ga0495658_0006430 3300046683 Bacteria 5772
173 Ga0495669_0004652 3300046684 Bacteria 5688
174 Ga0495669_0034442 3300046684 Bacteria 2233
175 Ga0495613_0007609 3300046689 Bacteria 8055
176 Ga0495624_0000380 3300046690 Bacteria 35436
177 Ga0495649_0062503 3300046694 Bacteria 2001
178 Ga0495600_0001048 3300046809 Bacteria 14960
179 Ga0495581_0000233 3300047315 Bacteria 26288
180 Ga0495604_0000253 3300047317 Bacteria 47392
181 Ga0495674_0015786 3300047319 Bacteria 7049
182 Ga0495676_0046401 3300047321 Bacteria 3526
183 Ga0495675_0000285 3300047444 Bacteria 36643
184 Ga0495684_0000184 3300047471 Bacteria 47730
185 Ga0495593_0000160 3300047673 Bacteria 34170
186 Ga0496102_0179939 3300048905 Bacteria 1992
187 Ga0496106_0000623 3300048909 Bacteria 25352
188 Ga0496111_0094751 3300048914 Bacteria 2190
189 Ga0496115_0117854 3300048918 Bacteria 2184
190 Ga0496117_0018594 3300048920 Bacteria 5747
191 Ga0496121_0001595 3300048924 Bacteria 37710
192 Ga0496121_0030328 3300048924 Bacteria 4968
193 Ga0496121_0032424 3300048924 Bacteria 4748
194 Ga0496121_0052775 3300048924 Bacteria 3410
195 Ga0496121_0079418 3300048924 Bacteria 2605
196 Ga0496121_0083506 3300048924 Bacteria 2521
197 Ga0496124_0001501 3300048927 Bacteria 34172
198 Ga0496124_0203946 3300048927 Bacteria 1501
199 Ga0496125_0041717 3300048928 Bacteria 3920
200 Ga0496125_0118378 3300048928 Bacteria 1897
201 Ga0496126_0011038 3300048929 Bacteria 9392
202 Ga0496126_0033986 3300048929 Bacteria 4794
203 Ga0496126_0068259 3300048929 Bacteria 3175
204 Ga0501067_0069855 3300049583 Bacteria 1945
205 nmdc:mga03n38_1661_c1 3300050490 Bacteria 6530
206 nmdc:mga0yw44_1458_c1 3300050492 Bacteria 9401
207 nmdc:mga0yw44_22129_c1 3300050492 Bacteria 3558
208 nmdc:mga0yw44_58258_c1 3300050492 Bacteria 2359
209 nmdc:mga06z11_20912_c1 3300050494 Bacteria 3032
210 nmdc:mga06z11_24592_c1 3300050494 Bacteria 2843
211 nmdc:mga04h51_5081_c1 3300050495 Bacteria 3331
212 nmdc:mga07m45_1303_c1 3300050496 Bacteria 11342
213 nmdc:mga05p37_162450_c1 3300050507 Bacteria 2727
214 nmdc:mga0a205_233122_c1 3300050515 Bacteria 1723
215 Ga0495601_0013501 3300053077 Bacteria 4913
216 Ga0495595_0000318 3300053084 Bacteria 18768
217 Ga0495619_0000209 3300053085 Bacteria 42507
218 Ga0495619_0065659 3300053085 Bacteria 2421
219 Ga0500566_0000187 3300053094 Bacteria 32100
220 Ga0500566_0000806 3300053094 Bacteria 17838
221 Ga0500640_001488 3300053095 Bacteria 7160
222 Ga0500641_0005020 3300053096 Bacteria 4692
223 Ga0500557_000050 3300053105 Bacteria 54589
224 Ga0500572_000300 3300053111 Bacteria 17529
225 Ga0500591_042585 3300053115 Bacteria 2155
226 Ga0500595_004656 3300053119 Bacteria 6103
227 Ga0500608_061035 3300053122 Bacteria 1802
228 Ga0500559_0003101 3300053136 Bacteria 8276
229 Ga0500559_0009056 3300053136 Bacteria 4325
230 Ga0500573_0042657 3300053140 Bacteria 2619
231 Ga0500603_000147 3300053150 Bacteria 17079
232 Ga0500638_037601 3300053162 Bacteria 2350
233 Ga0500639_000430 3300053163 Bacteria 20905
234 Ga0500636_0003469 3300053177 Bacteria 8877
235 Ga0500636_0025258 3300053177 Bacteria 3510
236 Ga0500625_001830 3300053729 Bacteria 7598
237 Ga0500596_002476 3300053735 Bacteria 3640
238 2509147336 2508501128 Bacteria 8613869
239 2511396842 2511231028 Bacteria 8046582
240 2513646665 2513237095 Bacteria 8976980
241 2513656715 2513237096 Bacteria 8722461
242 2513892731 2513237141 Bacteria 8496279
243 2513917900 2513237145 Bacteria 8979722
244 2517101986 2517093001 Bacteria 9002274
245 2517893054 2517572143 Bacteria 9484767
246 2523466710 2523231067 Bacteria 5230452
247 2524436585 2524023205 Bacteria 8918781
248 2671117677 2667528175 Bacteria 7532676
249 2723845741 2721755755 Bacteria 8322773
250 2739351099 2738543031 Bacteria 5769731
251 2745081123 2744054633 Bacteria 8678936
252 2793070112 2791355197 Bacteria 8420563
253 2793077288
254 2818240141 2816332527 Bacteria 8933356
255 2824603308 2824600985 Bacteria 8488197
256 2824614043 2824609381 Bacteria 8672835
257 2824629443 2824626560 Bacteria 8813858
258 2824637085 2824635225 Bacteria 8785348
259 2824646616 2824644064 Bacteria 8743947
260 2824656591 2824653114 Bacteria 8493680
261 2824685927 2824679649 Bacteria 8248951
262 2824716326 2824714736 Bacteria 8717648
263 2824726124 2824723954 Bacteria 8758240
264 2841957993 2841957949 Bacteria 8652217
265 2842039744 2842038055 Bacteria 8002051
266 2842047310 2842045827 Bacteria 8006841
267 2844318395 2844315083 Bacteria 8138177
268 2847935284 2847930680 Bacteria 9342022
269 2849079990 2849076700 Bacteria 7039503
270 2874609641 2874604998 Bacteria 7834745
271 2874636233 2874628541 Bacteria 8630250
272 2876809488 2876808645 Bacteria 8824342
273 2879088972 2879083081 Bacteria 8587928
274 2879118495 2879110137 Bacteria 8907982
275 2881670835 2881665667 Bacteria 8175609
276 2888383337 2888378607 Bacteria 9652610
277 2888394585 2888388044 Bacteria 7304136
278 2888423728 2888419890 Bacteria 7857137
279 2889040554 2889033259 Bacteria 9099371
280 2903729343 2903727486 Bacteria 8281579
281 2903755830 2903748898 Bacteria 9972761
282 2904696263 2904690495 Bacteria 9412302
283 2906606016 2906602504 Bacteria 8295279
284 2906617944
285 2908743443 2908739725 Bacteria 8628932
286 2908760951 2908756301 Bacteria 8864324
287 2922367681 2922361189 Bacteria 7436256
288 2922392421 2922386360 Bacteria 7017218
289 2922395647 2922393267 Bacteria 8285685
290 2922429443
291 2935633684 2935630451 Bacteria 8169952
292 2935651849 2935648319 Bacteria 8801166
293 2935660659 2935656913 Bacteria 8965014
294 2935960435 2935959822 Bacteria 7869783
295 2936014715 2936011229 Bacteria 8801034
296 2936023488 2936019824 Bacteria 8804134
297 2936032516 2936028420 Bacteria 8965941
298 2936050456 2936046547 Bacteria 8903709
299 2936059052 2936055302 Bacteria 8785755
300 2941510575 2941507105 Bacteria 8166816
301 2941517686 2941515067 Bacteria 8166720
302 2941525703 2941523033 Bacteria 8169134
303 3005489473 3005483717 Bacteria 7877331
304 3005588616 3005587118 Bacteria 7794411
305 3005598485 3005594810 Bacteria 8716512
306 3005721674 3005718088 Bacteria 8283608
307 8006941519 8006933436 Bacteria 10410654
308 8006967380 8006964411 Bacteria 8966052
309 8006981229 8006973647 Bacteria 10679141
310 8006988163 8006984368 Bacteria 9651211
311 8016631783 8016630954 Bacteria 9217207
312 8019557427 8019555841 Bacteria 9642137
313 8019567872 8019565922 Bacteria 9639779
314 8019644514 8019638758 Bacteria 9062356
315 8056674486 8056673599 Bacteria 7871253
316 8056690150 8056689827 Bacteria 6712655
317 Ga0105239_10219772
318 JGI25160J50197_1000688
319 Ga0055531_10002008
320 Ga0065165_1002264
321 Ga0070670_100103690
322 Ga0068869_100072135
323 Ga0068869_100139063
324 Ga0070680_100010938
325 Ga0068868_100018772
326 Ga0068868_100119611
327 Ga0070668_100035918
328 Ga0070671_100128148
329 Ga0070667_100263305
330 Ga0070709_10005193
331 Ga0070709_10006315
332 Ga0070714_100116042
333 Ga0070710_10001905
334 Ga0070710_10009627
335 Ga0070711_100001657
336 Ga0070663_100069468
337 Ga0070663_100133669
338 Ga0070663_100150776
339 Ga0070678_100028625
340 Ga0070662_100053676
341 Ga0070681_10008846
342 Ga0070681_10031130
343 Ga0068867_100090421
344 Ga0070679_100005046
345 Ga0068853_100179788
346 Ga0068853_100226104
347 Ga0070665_100022409
348 Ga0070665_100132040
349 Ga0068855_100090316
350 Ga0068854_100011067
351 Ga0068856_100000206
352 Ga0068859_100169852
353 Ga0068864_100010493
354 Ga0068858_100132231
355 Ga0068860_100018505
356 Ga0068862_100046924
357 Ga0081455_10009281
358 Ga0081455_10009559
359 Ga0081455_10032712
360 Ga0081540_1004850
361 Ga0081540_1004926
362 Ga0081540_1012609
363 Ga0081540_1014738
364 Ga0081540_1019543
365 Ga0081540_1026736
366 Ga0081540_1028969
367 Ga0081539_10071780
368 Ga0070717_10028591
369 Ga0075365_10039041
370 Ga0075363_100005212
371 Ga0070712_100004673
372 Ga0070712_100081277
373 Ga0075367_10013817
374 Ga0075370_10008490
375 Ga0097620_100169850
376 Ga0099823_1057222
377 Ga0111539_10188143
378 Ga0111539_10407878
379 Ga0105247_10009618
380 Ga0105247_10032470
381 Ga0105248_10075136
382 Ga0105237_10050647
383 Ga0105249_10039465
384 Ga0105239_10223698
385 Ga0163163_10039710
386 Ga0163163_10180822
387 Ga0157380_10029440
388 Ga0157379_10087069
389 Ga0213872_10010414
390 Ga0213872_10016147
391 Ga0209148_1000155
392 Ga0209233_1009015
393 Ga0209455_1002054
394 Ga0209758_1000021
395 Ga0209758_1003773
396 Ga0209758_1041868
397 Ga0209256_1006118
398 Ga0207426_1000577
399 Ga0209257_1001692
400 Ga0207692_10004221
401 Ga0207699_10005494
402 Ga0207707_10035720
403 Ga0207707_10260110
404 Ga0207693_10009758
405 Ga0207693_10123355
406 Ga0207652_10059049
407 Ga0207652_10077071
408 Ga0207709_10014780
409 Ga0207711_10232127
410 Ga0207689_10032149
411 Ga0207679_10150690
412 Ga0207667_10105498
413 Ga0207668_10016121
414 Ga0207703_10071585
415 Ga0207639_10061783
416 Ga0207639_10155216
417 Ga0207678_10032013
418 Ga0207678_10068567
419 Ga0207702_10000075
420 Ga0207641_10068567
421 Ga0207648_10040321
422 Ga0207676_10271152
423 Ga0207675_100026900
424 Ga0207683_10017697
425 Ga0209389_1000117
426 Ga0209489_109135
427 Ga0209700_100021
428 Ga0268266_10017447
429 Ga0268266_10085986
430 Ga0268266_10213170
431 Ga0268265_10198717
432 Ga0268264_10000022
433 Ga0307509_10029592
434 Ga0307508_10000038
435 Ga0307516_10054849
436 Ga0307510_10043779
437 Ga0373953_0000391
438 Ga0373954_0000035
439 Ga0373957_0000626
440 Ga0373955_0001026
441 Ga0373955_0043580
442 Ga0373924_0002860
443 Ga0373935_0000256
444 Ga0373927_0005857
445 Ga0373927_0010055
446 Ga0373947_0041937
447 Ga0373947_0070431
448 Ga0373937_0000118
449 Ga0373937_0035203
450 Ga0372808_002641
451 Ga0373925_0021009
452 Ga0436365_1386710
453 Ga0436365_1392220
454 Ga0436361_1176672
455 Ga0436363_0824288
456 Ga0436363_1059412
457 Ga0466972_0074170
458 Ga0466967_0188677
459 Ga0495592_0000649
460 Ga0495603_0000027
461 Ga0495603_0057738
462 Ga0495629_0000290
463 Ga0495629_0120578
464 Ga0495641_0004283
465 Ga0495653_0000161
466 Ga0495580_0000610
467 Ga0495582_0000157
468 Ga0495639_0000048
469 Ga0495662_0000505
470 Ga0495594_0000279
471 Ga0495606_0032910
472 Ga0495630_0000846
473 Ga0495648_0044549
474 Ga0495652_0023114
475 Ga0495665_0000165
476 Ga0495640_0002246
477 Ga0495597_0027435
478 Ga0495622_0002823
479 Ga0495634_0001002
480 Ga0495634_0002287
481 Ga0495625_0078166
482 Ga0495635_0062681
483 Ga0495659_0037669
484 Ga0495588_0035611
485 Ga0495588_0038161
486 Ga0495599_0000253
487 Ga0495646_0003057
488 Ga0495658_0006430
489 Ga0495669_0004652
490 Ga0495669_0034442
491 Ga0495613_0007609
492 Ga0495624_0000380
493 Ga0495649_0062503
494 Ga0495600_0001048
495 Ga0495581_0000233
496 Ga0495604_0000253
497 Ga0495674_0015786
498 Ga0495676_0046401
499 Ga0495675_0000285
500 Ga0495684_0000184
501 Ga0495593_0000160
502 Ga0496102_0179939
503 Ga0496106_0000623
504 Ga0496111_0094751
505 Ga0496115_0117854
506 Ga0496117_0018594
507 Ga0496121_0001595
508 Ga0496121_0030328
509 Ga0496121_0032424
510 Ga0496121_0052775
511 Ga0496121_0079418
512 Ga0496121_0083506
513 Ga0496124_0001501
514 Ga0496124_0203946
515 Ga0496125_0041717
516 Ga0496125_0118378
517 Ga0496126_0011038
518 Ga0496126_0033986
519 Ga0496126_0068259
520 Ga0501067_0069855
521 nmdc:mga03n38_1661_c1
522 nmdc:mga0yw44_1458_c1
523 nmdc:mga0yw44_22129_c1
524 nmdc:mga0yw44_58258_c1
525 nmdc:mga06z11_20912_c1
526 nmdc:mga06z11_24592_c1
527 nmdc:mga04h51_5081_c1
528 nmdc:mga07m45_1303_c1
529 nmdc:mga05p37_162450_c1
530 nmdc:mga0a205_233122_c1
531 Ga0495601_0013501
532 Ga0495595_0000318
533 Ga0495619_0000209
534 Ga0495619_0065659
535 Ga0500566_0000187
536 Ga0500566_0000806
537 Ga0500640_001488
538 Ga0500641_0005020
539 Ga0500557_000050
540 Ga0500572_000300
541 Ga0500591_042585
542 Ga0500595_004656
543 Ga0500608_061035
544 Ga0500559_0003101
545 Ga0500559_0009056
546 Ga0500573_0042657
547 Ga0500603_000147
548 Ga0500638_037601
549 Ga0500639_000430
550 Ga0500636_0003469
551 Ga0500636_0025258
552 Ga0500625_001830
553 Ga0500596_002476
554 2509147336
555 2511396842
556 2513646665
557 2513656715
558 2513892731
559 2513917900
560 2517101986
561 2517893054
562 2523466710
563 2524436585
564 2671117677
565 2723845741
566 2739351099
567 2745081123
568 2793070112
569 2793077288
570 2818240141
571 2824603308
572 2824614043
573 2824629443
574 2824637085
575 2824646616
576 2824656591
577 2824685927
578 2824716326
579 2824726124
580 2841957993
581 2842039744
582 2842047310
583 2844318395
584 2847935284
585 2849079990
586 2874609641
587 2874636233
588 2876809488
589 2879088972
590 2879118495
591 2881670835
592 2888383337
593 2888394585
594 2888423728
595 2889040554
596 2903729343
597 2903755830
598 2904696263
599 2906606016
600 2906617944
601 2908743443
602 2908760951
603 2922367681
604 2922392421
605 2922395647
606 2922429443
607 2935633684
608 2935651849
609 2935660659
610 2935960435
611 2936014715
612 2936023488
613 2936032516
614 2936050456
615 2936059052
616 2941510575
617 2941517686
618 2941525703
619 3005489473
620 3005588616
621 3005598485
622 3005721674
623 8006941519
624 8006967380
625 8006981229
626 8006988163
627 8016631783
628 8019557427
629 8019567872
630 8019644514
631 8056674486
632 8056690150

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01636

APH

Phosphotransferase enzyme family

96

352

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pyw-assembly1.cif.gz_A structure of a. thaliana 5-methylthioribose kinase in complex with adp and mtr 0.9206 8 419
2pyw-assembly1.cif.gz_B structure of a. thaliana 5-methylthioribose kinase in complex with adp and mtr 0.9201 7 419
2pyw-assembly1.cif.gz_B structure of a. thaliana 5-methylthioribose kinase in complex with adp and mtr 0.9115 7 419
2pyw-assembly1.cif.gz_A structure of a. thaliana 5-methylthioribose kinase in complex with adp and mtr 0.908 8 419
2pui-assembly1.cif.gz_A structures of 5-methylthioribose kinase reveal substrate specificity and unusual mode of nucleotide binding 0.8974 9 422
ID Description Score Start End Superfamily
af_I1LEI8_121_417_3.90.1200.10 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.9368 123 419 3.90.1200.10
2pywA01 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.9318 8 122 3.30.200.20
af_I1LEI8_121_417_3.90.1200.10 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.9308 123 419 3.90.1200.10
2pu8A02 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.9216 125 422 3.90.1200.10
2pu8A02 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.9121 125 422 3.90.1200.10
ID Description Score Start End GO Terms
AF-A0A431RW34-F1-model_v4 deleted 0.9745 279 429
AF-A0A431RW34-F1-model_v4 deleted 0.962 279 429
AF-A0A529LZ17-F1-model_v4 S-methyl-5-thioribose kinase 0.955 252 422 GO:0016020
GO:0016301
AF-A0A439KH03-F1-model_v4 S-methyl-5-thioribose kinase (EC 2.7.1.100) 0.9491 199 426 GO:0016020
GO:0046522
AF-A0A531MIZ1-F1-model_v4 S-methyl-5-thioribose kinase (EC 2.7.1.100) 0.947 119 413 GO:0009086
GO:0046522

Map