F403233

General Info

Members Datasets Scaffolds Average Seq Length
315 240 630 575

Family's Representative Sequence

Representative Sequence 3300030522|Ga0307512_10001966|Ga0307512_1000196619
Length 639
Sequence MGGSAAGARQAADSPHPALDRPIRARTRKNPFTPHGILGTSTHPHEENGSHPMAPVTSLTDLVNQRLTDALSSALPEADGVDPLLRRSDRADFQANGILALAKKAKANPRELATQVVAQVESGDVIKDIEVSGPGFLNITIADKAITQSLAARYADAERLGVPPKENPGVTVIDYAQPNVAKEMHVGHLRSAVIGDALRGMLDFTGEQTIGRHHIGDWGTQFGMLIQYLIENPGELAPASEVDGEQAMSNLNRVYKASRAVFDSDEDFKERARKRVVALQSGDKETLELWQQFVDESKVYFYSVFEKLDMAVRDDEIVGESAYNDLMPQTARLLEESGVAVRSDGALVVFFDEIRGKDDQPVPLIVQKADGGFGYAASDLSAIRNRVHDLHATTLIYVVDVRQSLHFRMVFETARRAGWLTDDVTAHNMGYGTVLGADGKPFKTREGETVKLEDLLDEAVERATAVVREKAEKVGLSEEEIVENGRYVGIGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSVYLQYAYARIKSILRKAEGAPPVAHPGLELAPAERALGLHLDAFGDTVFEAAAEYAPHKLAAYLYQLASHLTTFYDQCPVLKAETPEQRENRLFLVDLTARTLHQGMALLGIRTPERL

Samples

Sample ID Description Type Environment
1 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
37 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
40 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
41 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
54 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
66 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
67 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
68 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
69 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
70 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
71 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
72 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
73 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
74 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
75 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
76 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
82 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
83 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
84 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
87 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
88 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
91 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
94 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
95 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
98 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
99 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
100 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
101 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
102 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
103 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
106 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
107 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
108 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
113 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
114 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
115 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
116 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
119 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
148 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
149 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
155 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
157 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
158 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
159 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
160 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
161 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
162 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
163 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
166 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
169 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
170 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
171 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
172 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
173 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
174 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
175 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
176 2643221548 Streptomyces sp. Root55 Isolate Unclassified
177 2643221578 Streptomyces sp. Root63 Isolate Unclassified
178 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
179 2643221647 Streptomyces sp. Root369 Isolate Unclassified
180 2643221670 Streptomyces sp. Root431 Isolate Unclassified
181 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
182 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
183 2643221714 Streptomyces sp. Root264 Isolate Unclassified
184 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
185 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
186 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
187 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
188 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
189 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
190 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
191 2808606448 Streptomyces sp. 193411 Isolate Unclassified
192 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
193 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
194 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
195 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
196 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
197 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
198 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
199 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
200 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
201 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
202 2862574272 Streptomyces sp. AcE210 Isolate Nodule
203 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
204 2867369537 Streptomyces sp. Z26 Isolate Unclassified
205 2867428634 Streptomyces sp. RP5T Isolate Unclassified
206 2867475112 Streptomyces sp. TM32 Isolate Unclassified
207 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
208 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
209 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
210 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
211 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
212 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
213 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
214 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
215 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
216 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
217 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
218 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
219 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
220 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
221 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
222 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
223 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
224 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
225 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
226 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
227 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
228 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
229 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
230 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
231 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
232 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
233 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
234 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
235 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
236 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
237 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
238 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
239 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
240 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.14
Metatranscriptomes 0
Isolates 22.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.4
Nodule 0.95
Rhizoplane 1.27
Rhizosphere 78.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307512_10001966 3300030522 Bacteria 27433
2 Ga0070683_100028391 3300005329 Bacteria 5056
3 Ga0068869_100002887 3300005334 Bacteria 10439
4 Ga0070682_100002589 3300005337 Bacteria 9990
5 Ga0070692_10015806 3300005345 Bacteria 3577
6 Ga0070668_100018746 3300005347 Bacteria 5197
7 Ga0070675_100012242 3300005354 Bacteria 6723
8 Ga0070662_100006151 3300005457 Bacteria 7718
9 Ga0070662_100025344 3300005457 Bacteria 4094
10 Ga0070684_100012061 3300005535 Bacteria 6910
11 Ga0070665_100068260 3300005548 Bacteria 3565
12 Ga0070664_100038503 3300005564 Bacteria 4025
13 Ga0068857_100042608 3300005577 Bacteria 4028
14 Ga0068866_10015645 3300005718 Bacteria 3373
15 Ga0081455_10000740 3300005937 Bacteria 42421
16 Ga0081455_10020860 3300005937 Bacteria 6159
17 Ga0081455_10037578 3300005937 Bacteria 4297
18 Ga0081455_10104633 3300005937 Bacteria 2264
19 Ga0081538_10000056 3300005981 Bacteria 103929
20 Ga0075365_10036570 3300006038 Bacteria 3181
21 Ga0075368_10002681 3300006042 Bacteria 5859
22 Ga0075363_100013042 3300006048 Bacteria 4017
23 Ga0075432_10000111 3300006058 Bacteria 17776
24 Ga0075432_10000199 3300006058 Bacteria 15725
25 Ga0075428_100011910 3300006844 Bacteria 9674
26 Ga0075428_100081580 3300006844 Bacteria 3529
27 Ga0075431_100009214 3300006847 Bacteria 9906
28 Ga0075433_10000805 3300006852 Bacteria 21784
29 Ga0075433_10005329 3300006852 Bacteria 10090
30 Ga0075434_100000012 3300006871 Bacteria 83539
31 Ga0075434_100000586 3300006871 Bacteria 28076
32 Ga0068865_100005471 3300006881 Bacteria 7705
33 Ga0075436_100003098 3300006914 Bacteria 11399
34 Ga0075435_100001261 3300007076 Bacteria 16237
35 Ga0075435_100001492 3300007076 Bacteria 15035
36 Ga0111539_10001961 3300009094 Bacteria 27463
37 Ga0111539_10001973 3300009094 Bacteria 27387
38 Ga0111539_10004582 3300009094 Bacteria 18065
39 Ga0105245_10042554 3300009098 Bacteria 4053
40 Ga0105245_10072241 3300009098 Bacteria 3134
41 Ga0105245_10095216 3300009098 Bacteria 2746
42 Ga0114129_10055140 3300009147 Bacteria 5572
43 Ga0105243_10012899 3300009148 Bacteria 6315
44 Ga0105249_10072813 3300009553 Bacteria 3177
45 Ga0105249_10138238 3300009553 Bacteria 2333
46 Ga0105239_10065844 3300010375 Bacteria 3980
47 Ga0105246_10000307 3300011119 Bacteria 25935
48 Ga0163162_10024281 3300013306 Bacteria 5983
49 Ga0157372_10041043 3300013307 Bacteria 5115
50 Ga0182007_10002505 3300015262 Bacteria 9069
51 Ga0183367_1002 3300015688 Bacteria 1101531
52 Ga0163161_10044000 3300017792 Bacteria 3215
53 Ga0163161_10117038 3300017792 Bacteria 1998
54 Ga0209758_1009887 3300025297 Bacteria 5821
55 Ga0207426_1004028 3300025302 Bacteria 7448
56 Ga0207688_10001148 3300025901 Bacteria 13654
57 Ga0207688_10042426 3300025901 Bacteria 2533
58 Ga0207647_10015653 3300025904 Bacteria 5193
59 Ga0207650_10047706 3300025925 Bacteria 3157
60 Ga0207706_10001585 3300025933 Bacteria 22585
61 Ga0207706_10009881 3300025933 Bacteria 8752
62 Ga0207706_10122653 3300025933 Bacteria 2286
63 Ga0207686_10025372 3300025934 Bacteria 3447
64 Ga0207704_10053329 3300025938 Bacteria 2457
65 Ga0207689_10011388 3300025942 Bacteria 7622
66 Ga0207661_10045308 3300025944 Bacteria 3481
67 Ga0207702_10061192 3300026078 Bacteria 3211
68 Ga0207674_10049837 3300026116 Bacteria 4280
69 Ga0207675_100144659 3300026118 Bacteria 2260
70 Ga0207428_10000607 3300027907 Bacteria 42448
71 Ga0207428_10000884 3300027907 Bacteria 33619
72 Ga0307517_10005882 3300028786 Bacteria 18311
73 Ga0265340_10044033 3300031247 Bacteria 2185
74 Ga0307513_10026933 3300031456 Bacteria 6613
75 Ga0307513_10109812 3300031456 Bacteria 2755
76 Ga0307508_10050947 3300031616 Bacteria 3681
77 Ga0307516_10038416 3300031730 Bacteria 4778
78 Ga0307405_10002784 3300031731 Bacteria 7846
79 Ga0307405_10017946 3300031731 Bacteria 3894
80 Ga0307413_10026206 3300031824 Bacteria 3209
81 Ga0307410_10000454 3300031852 Bacteria 16523
82 Ga0307410_10024185 3300031852 Bacteria 3791
83 Ga0307406_10003475 3300031901 Bacteria 8569
84 Ga0307406_10030045 3300031901 Bacteria 3295
85 Ga0307407_10003260 3300031903 Bacteria 6607
86 Ga0307409_100000587 3300031995 Bacteria 15886
87 Ga0307416_100000343 3300032002 Bacteria 24154
88 Ga0307416_100041603 3300032002 Bacteria 3581
89 Ga0307416_100141500 3300032002 Bacteria 2187
90 Ga0307414_10069873 3300032004 Bacteria 2526
91 Ga0307415_100000466 3300032126 Bacteria 17481
92 Ga0307415_100044063 3300032126 Bacteria 2980
93 Ga0307510_10000487 3300033180 Bacteria 39096
94 Ga0439436_0000384 3300041404 Bacteria 11008
95 Ga0451837_1571879 3300041494 Bacteria 3391
96 Ga0439433_0006442 3300041999 Bacteria 2526
97 Ga0439449_0015900 3300042007 Bacteria 2828
98 Ga0439457_003970 3300042014 Bacteria 3937
99 Ga0450894_001157 3300042131 Bacteria 3940
100 Ga0439460_0017589 3300042461 Bacteria 1917
101 Ga0466972_0012910 3300044658 Bacteria 4195
102 Ga0466966_0078635 3300044684 Bacteria 2056
103 Ga0466963_0007739 3300044694 Bacteria 6420
104 Ga0466960_0009096 3300044901 Bacteria 4086
105 Ga0466959_0088140 3300045049 Bacteria 2231
106 Ga0466967_0010643 3300045976 Bacteria 6913
107 Ga0495617_006633 3300046452 Bacteria 4050
108 Ga0495627_018390 3300046453 Bacteria 2358
109 Ga0495603_0000082 3300046455 Bacteria 42500
110 Ga0495603_0000968 3300046455 Bacteria 16537
111 Ga0495603_0007359 3300046455 Bacteria 6622
112 Ga0495603_0010947 3300046455 Bacteria 5502
113 Ga0495629_0000996 3300046459 Bacteria 22705
114 Ga0495629_0003998 3300046459 Bacteria 11082
115 Ga0495629_0041486 3300046459 Bacteria 3238
116 Ga0495580_0065709 3300046472 Bacteria 2540
117 Ga0495639_0023290 3300046475 Bacteria 2721
118 Ga0495664_0011962 3300046477 Bacteria 4903
119 Ga0495664_0059847 3300046477 Bacteria 2267
120 Ga0495585_0006608 3300046492 Bacteria 7170
121 Ga0495585_0016809 3300046492 Bacteria 4239
122 Ga0495594_0000372 3300046499 Bacteria 22509
123 Ga0495596_0015297 3300046500 Bacteria 3216
124 Ga0495607_0016981 3300046501 Bacteria 4685
125 Ga0495628_0006577 3300046516 Bacteria 10144
126 Ga0495631_0026740 3300046518 Bacteria 2645
127 Ga0495632_0023133 3300046519 Bacteria 3322
128 Ga0495643_0005261 3300046522 Bacteria 8794
129 Ga0495643_0016190 3300046522 Bacteria 4385
130 Ga0495652_0049525 3300046529 Bacteria 3596
131 Ga0495654_0019602 3300046530 Bacteria 3538
132 Ga0495640_0005663 3300046533 Bacteria 9937
133 Ga0495609_0035381 3300046538 Bacteria 2260
134 Ga0495597_0013914 3300046542 Bacteria 3845
135 Ga0495633_0015303 3300046558 Bacteria 3981
136 Ga0495588_0007491 3300046674 Bacteria 4971
137 Ga0495657_0008749 3300046675 Bacteria 7721
138 Ga0495613_0022589 3300046689 Bacteria 4685
139 Ga0495670_0021977 3300046691 Bacteria 3149
140 Ga0495671_0041479 3300046692 Bacteria 2317
141 Ga0495589_0023090 3300046794 Bacteria 3170
142 Ga0495660_0043428 3300046810 Bacteria 2479
143 Ga0495604_0013631 3300047317 Bacteria 6482
144 Ga0495636_0002331 3300047318 Bacteria 7299
145 Ga0495676_0004770 3300047321 Bacteria 12418
146 Ga0495676_0031542 3300047321 Bacteria 4479
147 Ga0495683_0011267 3300047323 Bacteria 4709
148 Ga0495687_019811 3300047443 Bacteria 3291
149 Ga0495675_0021723 3300047444 Bacteria 4089
150 Ga0495685_002492 3300047447 Bacteria 5777
151 Ga0495685_005045 3300047447 Bacteria 4297
152 Ga0495681_0003408 3300047470 Bacteria 11066
153 Ga0495681_0013241 3300047470 Bacteria 4799
154 Ga0495686_0031482 3300047472 Bacteria 3439
155 Ga0495686_0052270 3300047472 Bacteria 2562
156 Ga0495614_0001045 3300048089 Bacteria 11818
157 Ga0495614_0026974 3300048089 Bacteria 2476
158 Ga0495626_0011865 3300048091 Bacteria 4587
159 Ga0496109_0058235 3300048912 Bacteria 3529
160 Ga0496109_0067237 3300048912 Bacteria 3283
161 Ga0496110_0047814 3300048913 Bacteria 3748
162 Ga0496114_0036908 3300048917 Bacteria 4040
163 Ga0501031_0020576 3300049568 Bacteria 4302
164 Ga0501031_0025815 3300049568 Bacteria 3833
165 Ga0501032_0002765 3300049569 Bacteria 13665
166 Ga0501032_0004129 3300049569 Bacteria 11004
167 Ga0501032_0026517 3300049569 Bacteria 3983
168 Ga0501032_0072871 3300049569 Bacteria 2288
169 Ga0501033_0015895 3300049570 Bacteria 5700
170 Ga0501033_0029678 3300049570 Bacteria 4109
171 Ga0501034_0003651 3300049571 Bacteria 17412
172 Ga0501034_0033003 3300049571 Bacteria 5257
173 Ga0501034_0044801 3300049571 Bacteria 4472
174 Ga0501034_0064038 3300049571 Bacteria 3690
175 Ga0501034_0064454 3300049571 Bacteria 3678
176 Ga0501036_0009484 3300049572 Bacteria 8006
177 Ga0501036_0017609 3300049572 Bacteria 5976
178 Ga0501036_0038155 3300049572 Bacteria 4065
179 Ga0501036_0109568 3300049572 Bacteria 2333
180 Ga0501037_0000975 3300049573 Bacteria 21258
181 Ga0501037_0005445 3300049573 Bacteria 9274
182 Ga0501037_0043225 3300049573 Bacteria 3312
183 Ga0501038_0018908 3300049574 Bacteria 6219
184 Ga0501038_0116997 3300049574 Bacteria 2202
185 Ga0501039_0023386 3300049575 Bacteria 4743
186 Ga0501041_0004127 3300049577 Bacteria 8401
187 Ga0501042_0031116 3300049578 Bacteria 3775
188 Ga0501043_0001222 3300049579 Bacteria 22653
189 Ga0501043_0004006 3300049579 Bacteria 12039
190 Ga0501043_0018361 3300049579 Bacteria 5484
191 Ga0501046_0005074 3300049580 Bacteria 11805
192 Ga0501046_0083894 3300049580 Bacteria 2458
193 Ga0501047_0000837 3300049581 Bacteria 31760
194 Ga0501047_0003361 3300049581 Bacteria 15156
195 Ga0501047_0154551 3300049581 Bacteria 2168
196 Ga0501048_0004249 3300049582 Bacteria 10915
197 Ga0501048_0033837 3300049582 Bacteria 3690
198 Ga0501068_0043695 3300049584 Bacteria 2697
199 Ga0501070_0027892 3300049586 Bacteria 4736
200 Ga0501070_0059347 3300049586 Bacteria 3171
201 Ga0501071_0058302 3300049587 Bacteria 2791
202 Ga0501074_0114517 3300049590 Bacteria 1929
203 Ga0501079_0047078 3300049741 Bacteria 3327
204 Ga0501080_0059926 3300049742 Bacteria 3542
205 Ga0501083_0042156 3300049744 Bacteria 3095
206 Ga0501035_0004136 3300049822 Bacteria 13782
207 Ga0501035_0005043 3300049822 Bacteria 12505
208 Ga0501035_0030664 3300049822 Bacteria 4901
209 Ga0501035_0038232 3300049822 Bacteria 4345
210 Ga0501035_0048384 3300049822 Bacteria 3813
211 Ga0501044_0001745 3300049823 Bacteria 25377
212 Ga0501044_0002390 3300049823 Bacteria 21401
213 Ga0501044_0008202 3300049823 Bacteria 11461
214 Ga0501044_0048339 3300049823 Bacteria 4394
215 Ga0501044_0099726 3300049823 Bacteria 2922
216 Ga0501044_0165183 3300049823 Bacteria 2188
217 Ga0501045_0013801 3300049824 Bacteria 5712
218 nmdc:mga03n38_17169_c1 3300050490 Bacteria 2829
219 nmdc:mga06z11_908_c1 3300050494 Bacteria 10770
220 nmdc:mga04h51_1332_c1 3300050495 Bacteria 5692
221 nmdc:mga0qj67_18869_c1 3300050509 Bacteria 5261
222 nmdc:mga06r32_16542_c1 3300050510 Bacteria 6723
223 nmdc:mga08y16_111715_c1 3300050511 Bacteria 2845
224 nmdc:mga08y16_115487_c1 3300050511 Bacteria 2795
225 nmdc:mga08y16_33058_c1 3300050511 Bacteria 5435
226 nmdc:mga0n895_108480_c1 3300050512 Bacteria 2791
227 nmdc:mga0rr50_3842_c1 3300050513 Bacteria 8723
228 nmdc:mga0rr50_5916_c1 3300050513 Bacteria 7362
229 nmdc:mga08x19_28093_c1 3300050514 Bacteria 3522
230 nmdc:mga0a205_3495_c1 3300050515 Bacteria 14033
231 nmdc:mga0a205_7449_c1 3300050515 Bacteria 9911
232 Ga0495655_0002681 3300053083 Bacteria 2859
233 Ga0500578_0006252 3300053086 Bacteria 7991
234 Ga0500628_000996 3300053129 Bacteria 4968
235 Ga0500652_004483 3300053131 Bacteria 4327
236 Ga0500658_0006480 3300053134 Bacteria 4340
237 Ga0500561_0000584 3300053137 Bacteria 5904
238 Ga0500600_0042863 3300053149 Bacteria 2604
239 Ga0500616_0014329 3300053153 Bacteria 4559
240 Ga0500633_0004760 3300053160 Bacteria 3153
241 Ga0500587_003175 3300053739 Bacteria 2313
242 Ga0501084_0022276 3300054114 Bacteria 5287
243 Ga0501082_0003549 3300060353 Bacteria 13621
244 2547410185 2547132111 Bacteria 8013147
245 2554256944 2554235005 Bacteria 6457341
246 2558907598 2558860112 Bacteria 9931328
247 2585301233 2582581312 Bacteria 7308206
248 2585308305 2582581313 Bacteria 10042643
249 2585321541 2582581314 Bacteria 11452267
250 2616703158 2616644814 Bacteria 11555299
251 2643762888 2643221548 Bacteria 8053412
252 2643898363 2643221578 Bacteria 9213798
253 2643943406 2643221587 Bacteria 7586415
254 2644261826 2643221647 Bacteria 10741251
255 2644388568 2643221670 Bacteria 6497041
256 2644403766 2643221673 Bacteria 9196637
257 2644429943 2643221677 Bacteria 7584031
258 2644632367 2643221714 Bacteria 9015452
259 2774396622 2773857762 Bacteria 5971770
260 2784589501 2784132148 Bacteria 8627943
261 2785342077 2784746763 Bacteria 9783172
262 2785370575 2784746768 Bacteria 10036182
263 2786671734 2786546132 Bacteria 10419719
264 2808921486 2808606375 Bacteria 9466072
265 2809198286 2808606439 Bacteria 5952208
266 2809233164 2808606448 Bacteria 8656184
267 2812349465 2811994878 Bacteria 5992952
268 2812479641 2811994917 Bacteria 7761064
269 2819698069 2818991463 Bacteria 7948711
270 2852640585 2852635781 Bacteria 8251373
271 2858908682 2858902515 Bacteria 7086037
272 2862181606 2862178590 Bacteria 8583590
273 2862286882 2862281513 Bacteria 9621493
274 2862291292 2862290372 Bacteria 7471434
275 2862387678 2862382967 Bacteria 10317375
276 2862514524 2862507626 Bacteria 9425308
277 2862578353 2862574272 Bacteria 10567477
278 2863411761 2863404153 Bacteria 9672205
279 2867373069 2867369537 Bacteria 6501581
280 2867432002 2867428634 Bacteria 9590268
281 2867481274 2867475112 Bacteria 6909112
282 2870784964 2870782633 Bacteria 9624083
283 2873154876 2873151551 Bacteria 8625867
284 2877680044 2877676314 Bacteria 9512378
285 2891969329 2891968417 Bacteria 5821697
286 2912718629 2912715099 Bacteria 9460473
287 2912761957 2912757875 Bacteria 7940295
288 2918504530 2918501144 Bacteria 8668083
289 2935392401 2935390628 Bacteria 7043367
290 2946076926 2946072368 Bacteria 8999607
291 2954002858 2954002825 Bacteria 9173742
292 2954384979 2954380949 Bacteria 10050426
293 2954678019 2954673503 Bacteria 9685905
294 2954686139 2954682443 Bacteria 9862841
295 2954695794 2954691527 Bacteria 10720516
296 2954710986 2954701450 Bacteria 10834262
297 2954715204 2954711539 Bacteria 10867210
298 2954725145 2954721474 Bacteria 10456478
299 2954736673 2954731030 Bacteria 10243860
300 2954744078 2954740390 Bacteria 10229294
301 2954755520 2954749733 Bacteria 10366972
302 2954763020 2954759201 Bacteria 9358192
303 2990090288 2990088156 Bacteria 6657676
304 2997606281 2997600082 Bacteria 9896405
305 3006327090 3006321560 Bacteria 8247479
306 3006396387 3006393351 Bacteria 6615579
307 3006428931 3006425503 Bacteria 6491253
308 3006494395 3006493962 Bacteria 8825450
309 8008566317 8008558824 Bacteria 10610750
310 8023630007 8023623736 Bacteria 8593882
311 8025536457 8025530807 Bacteria 8495698
312 8033685532 8033684223 Bacteria 6906479
313 8054160673 8054160619 Bacteria 7783213
314 8056454397 8056447290 Bacteria 7680491
315 8056833779 8056829672 Bacteria 9045328
316 Ga0307512_10001966
317 Ga0070683_100028391
318 Ga0068869_100002887
319 Ga0070682_100002589
320 Ga0070692_10015806
321 Ga0070668_100018746
322 Ga0070675_100012242
323 Ga0070662_100006151
324 Ga0070662_100025344
325 Ga0070684_100012061
326 Ga0070665_100068260
327 Ga0070664_100038503
328 Ga0068857_100042608
329 Ga0068866_10015645
330 Ga0081455_10000740
331 Ga0081455_10020860
332 Ga0081455_10037578
333 Ga0081455_10104633
334 Ga0081538_10000056
335 Ga0075365_10036570
336 Ga0075368_10002681
337 Ga0075363_100013042
338 Ga0075432_10000111
339 Ga0075432_10000199
340 Ga0075428_100011910
341 Ga0075428_100081580
342 Ga0075431_100009214
343 Ga0075433_10000805
344 Ga0075433_10005329
345 Ga0075434_100000012
346 Ga0075434_100000586
347 Ga0068865_100005471
348 Ga0075436_100003098
349 Ga0075435_100001261
350 Ga0075435_100001492
351 Ga0111539_10001961
352 Ga0111539_10001973
353 Ga0111539_10004582
354 Ga0105245_10042554
355 Ga0105245_10072241
356 Ga0105245_10095216
357 Ga0114129_10055140
358 Ga0105243_10012899
359 Ga0105249_10072813
360 Ga0105249_10138238
361 Ga0105239_10065844
362 Ga0105246_10000307
363 Ga0163162_10024281
364 Ga0157372_10041043
365 Ga0182007_10002505
366 Ga0183367_1002
367 Ga0163161_10044000
368 Ga0163161_10117038
369 Ga0209758_1009887
370 Ga0207426_1004028
371 Ga0207688_10001148
372 Ga0207688_10042426
373 Ga0207647_10015653
374 Ga0207650_10047706
375 Ga0207706_10001585
376 Ga0207706_10009881
377 Ga0207706_10122653
378 Ga0207686_10025372
379 Ga0207704_10053329
380 Ga0207689_10011388
381 Ga0207661_10045308
382 Ga0207702_10061192
383 Ga0207674_10049837
384 Ga0207675_100144659
385 Ga0207428_10000607
386 Ga0207428_10000884
387 Ga0307517_10005882
388 Ga0265340_10044033
389 Ga0307513_10026933
390 Ga0307513_10109812
391 Ga0307508_10050947
392 Ga0307516_10038416
393 Ga0307405_10002784
394 Ga0307405_10017946
395 Ga0307413_10026206
396 Ga0307410_10000454
397 Ga0307410_10024185
398 Ga0307406_10003475
399 Ga0307406_10030045
400 Ga0307407_10003260
401 Ga0307409_100000587
402 Ga0307416_100000343
403 Ga0307416_100041603
404 Ga0307416_100141500
405 Ga0307414_10069873
406 Ga0307415_100000466
407 Ga0307415_100044063
408 Ga0307510_10000487
409 Ga0439436_0000384
410 Ga0451837_1571879
411 Ga0439433_0006442
412 Ga0439449_0015900
413 Ga0439457_003970
414 Ga0450894_001157
415 Ga0439460_0017589
416 Ga0466972_0012910
417 Ga0466966_0078635
418 Ga0466963_0007739
419 Ga0466960_0009096
420 Ga0466959_0088140
421 Ga0466967_0010643
422 Ga0495617_006633
423 Ga0495627_018390
424 Ga0495603_0000082
425 Ga0495603_0000968
426 Ga0495603_0007359
427 Ga0495603_0010947
428 Ga0495629_0000996
429 Ga0495629_0003998
430 Ga0495629_0041486
431 Ga0495580_0065709
432 Ga0495639_0023290
433 Ga0495664_0011962
434 Ga0495664_0059847
435 Ga0495585_0006608
436 Ga0495585_0016809
437 Ga0495594_0000372
438 Ga0495596_0015297
439 Ga0495607_0016981
440 Ga0495628_0006577
441 Ga0495631_0026740
442 Ga0495632_0023133
443 Ga0495643_0005261
444 Ga0495643_0016190
445 Ga0495652_0049525
446 Ga0495654_0019602
447 Ga0495640_0005663
448 Ga0495609_0035381
449 Ga0495597_0013914
450 Ga0495633_0015303
451 Ga0495588_0007491
452 Ga0495657_0008749
453 Ga0495613_0022589
454 Ga0495670_0021977
455 Ga0495671_0041479
456 Ga0495589_0023090
457 Ga0495660_0043428
458 Ga0495604_0013631
459 Ga0495636_0002331
460 Ga0495676_0004770
461 Ga0495676_0031542
462 Ga0495683_0011267
463 Ga0495687_019811
464 Ga0495675_0021723
465 Ga0495685_002492
466 Ga0495685_005045
467 Ga0495681_0003408
468 Ga0495681_0013241
469 Ga0495686_0031482
470 Ga0495686_0052270
471 Ga0495614_0001045
472 Ga0495614_0026974
473 Ga0495626_0011865
474 Ga0496109_0058235
475 Ga0496109_0067237
476 Ga0496110_0047814
477 Ga0496114_0036908
478 Ga0501031_0020576
479 Ga0501031_0025815
480 Ga0501032_0002765
481 Ga0501032_0004129
482 Ga0501032_0026517
483 Ga0501032_0072871
484 Ga0501033_0015895
485 Ga0501033_0029678
486 Ga0501034_0003651
487 Ga0501034_0033003
488 Ga0501034_0044801
489 Ga0501034_0064038
490 Ga0501034_0064454
491 Ga0501036_0009484
492 Ga0501036_0017609
493 Ga0501036_0038155
494 Ga0501036_0109568
495 Ga0501037_0000975
496 Ga0501037_0005445
497 Ga0501037_0043225
498 Ga0501038_0018908
499 Ga0501038_0116997
500 Ga0501039_0023386
501 Ga0501041_0004127
502 Ga0501042_0031116
503 Ga0501043_0001222
504 Ga0501043_0004006
505 Ga0501043_0018361
506 Ga0501046_0005074
507 Ga0501046_0083894
508 Ga0501047_0000837
509 Ga0501047_0003361
510 Ga0501047_0154551
511 Ga0501048_0004249
512 Ga0501048_0033837
513 Ga0501068_0043695
514 Ga0501070_0027892
515 Ga0501070_0059347
516 Ga0501071_0058302
517 Ga0501074_0114517
518 Ga0501079_0047078
519 Ga0501080_0059926
520 Ga0501083_0042156
521 Ga0501035_0004136
522 Ga0501035_0005043
523 Ga0501035_0030664
524 Ga0501035_0038232
525 Ga0501035_0048384
526 Ga0501044_0001745
527 Ga0501044_0002390
528 Ga0501044_0008202
529 Ga0501044_0048339
530 Ga0501044_0099726
531 Ga0501044_0165183
532 Ga0501045_0013801
533 nmdc:mga03n38_17169_c1
534 nmdc:mga06z11_908_c1
535 nmdc:mga04h51_1332_c1
536 nmdc:mga0qj67_18869_c1
537 nmdc:mga06r32_16542_c1
538 nmdc:mga08y16_111715_c1
539 nmdc:mga08y16_115487_c1
540 nmdc:mga08y16_33058_c1
541 nmdc:mga0n895_108480_c1
542 nmdc:mga0rr50_3842_c1
543 nmdc:mga0rr50_5916_c1
544 nmdc:mga08x19_28093_c1
545 nmdc:mga0a205_3495_c1
546 nmdc:mga0a205_7449_c1
547 Ga0495655_0002681
548 Ga0500578_0006252
549 Ga0500628_000996
550 Ga0500652_004483
551 Ga0500658_0006480
552 Ga0500561_0000584
553 Ga0500600_0042863
554 Ga0500616_0014329
555 Ga0500633_0004760
556 Ga0500587_003175
557 Ga0501084_0022276
558 Ga0501082_0003549
559 2547410185
560 2554256944
561 2558907598
562 2585301233
563 2585308305
564 2585321541
565 2616703158
566 2643762888
567 2643898363
568 2643943406
569 2644261826
570 2644388568
571 2644403766
572 2644429943
573 2644632367
574 2774396622
575 2784589501
576 2785342077
577 2785370575
578 2786671734
579 2808921486
580 2809198286
581 2809233164
582 2812349465
583 2812479641
584 2819698069
585 2852640585
586 2858908682
587 2862181606
588 2862286882
589 2862291292
590 2862387678
591 2862514524
592 2862578353
593 2863411761
594 2867373069
595 2867432002
596 2867481274
597 2870784964
598 2873154876
599 2877680044
600 2891969329
601 2912718629
602 2912761957
603 2918504530
604 2935392401
605 2946076926
606 2954002858
607 2954384979
608 2954678019
609 2954686139
610 2954695794
611 2954710986
612 2954715204
613 2954725145
614 2954736673
615 2954744078
616 2954755520
617 2954763020
618 2990090288
619 2997606281
620 3006327090
621 3006396387
622 3006428931
623 3006494395
624 8008566317
625 8023630007
626 8025536457
627 8033685532
628 8054160673
629 8056454397
630 8056833779

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00750

tRNA-synt_1d

tRNA synthetases class I (R)

151

510

0.94

PF05746

DALR_1

DALR anticodon binding domain

524

639

0.94

PF03485

Arg_tRNA_synt_N

Arginyl tRNA synthetase N terminal domain

60

141

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ao8-assembly1.cif.gz_A crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine 0.9373 6 557
6ao8-assembly1.cif.gz_A crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine 0.9275 6 557
5yym-assembly1.cif.gz_A crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg 0.9223 1 557
5yym-assembly1.cif.gz_A crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg 0.9208 1 557
5yym-assembly2.cif.gz_B crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg 0.9112 1 557
ID Description Score Start End Superfamily
af_Q57689_448_566_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9551 444 557 1.10.730.10
af_P11875_109_453_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9525 107 436 3.40.50.620
af_F1QLT9_188_527_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9425 107 433 3.40.50.620
af_A0A0P0UYI0_130_475_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9398 108 434 3.40.50.620
af_Q8I5M2_126_469_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9235 107 436 3.40.50.620
ID Description Score Start End GO Terms
AF-Q9WX29-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) 0.9682 2 557 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A7W1E0Z5-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9654 206 557 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A840QG61-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) 0.9648 2 557 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-Q9WX29-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) 0.9648 2 557 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A6B3IJF5-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9639 327 557 GO:0004814
GO:0005524
GO:0006420

Map