F403060

General Info

Members Datasets Scaffolds Average Seq Length
315 132 622 353

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100028558|Ga0070698_1000285582
Length 410
Sequence MPWGNAVLAENQNDVEACLAEQAYDADIPTRGTAESTSSASFSAVVSRESQAMKGKTGNDTFEGIMGASRLLREVLDLVRTVAPTDSTVLIEGETGTGKELIARAIHNTSPRSARPFVKLNCSAIPFDLLESELFGHEKGAFTGAIAQKIGRFEMADTGTLFLDEIGDLPLALQPKLLRVLQEQEFERLGSGRTHRINVRVVAATHRDLMEMVRRNEFRSDLYYRLNVFPVVLPPLRERREDIPQLASHFVEVFSRRMGKRIDHIPQNILDTFISYSWPGNVRELQNLSERAVIRSNNGELANPLAVLDKNPVALTVRPTQSSFSDSTRALILRALQATGWIIGGPDGAAARLGLKRTTLIAKMKKLEIVRPNPGRRTRTPLEVLDHAELNATIILTRQIKEENDANTAS

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
71 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
111 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
113 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
114 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
118 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
119 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
122 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
123 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
132 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.05
Metatranscriptomes 0.95
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.59
Rhizosphere 97.78
Stem 0
Stem Tuber 0
Unclassified 0.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100028558 3300005471 Bacteria 5793
2 Ga0070658_10027520 3300005327 Bacteria 4561
3 Ga0070670_100243582 3300005331 Bacteria 1565
4 Ga0068869_100026199 3300005334 Bacteria 4056
5 Ga0070666_10004557 3300005335 Bacteria 8450
6 Ga0070680_100185611 3300005336 Bacteria 1752
7 Ga0068868_100001050 3300005338 Bacteria 18884
8 Ga0068868_100017005 3300005338 Bacteria 5411
9 Ga0070668_100010715 3300005347 Bacteria 6816
10 Ga0070668_100142776 3300005347 Bacteria 1931
11 Ga0070669_100018179 3300005353 Bacteria 5022
12 Ga0070675_100032963 3300005354 Bacteria 4196
13 Ga0070675_100114536 3300005354 Bacteria 2285
14 Ga0070667_100000846 3300005367 Bacteria 28400
15 Ga0070709_10071158 3300005434 Bacteria 2244
16 Ga0070709_10097958 3300005434 Bacteria 1948
17 Ga0070709_10146080 3300005434 Bacteria 1629
18 Ga0070714_100008501 3300005435 Bacteria 8021
19 Ga0070713_100018196 3300005436 Bacteria 5338
20 Ga0070713_100192063 3300005436 Bacteria 1840
21 Ga0070713_100261871 3300005436 Bacteria 1580
22 Ga0070710_10005360 3300005437 Bacteria 6084
23 Ga0070710_10019723 3300005437 Bacteria 3489
24 Ga0070710_10027477 3300005437 Bacteria 3035
25 Ga0070710_10059675 3300005437 Bacteria 2167
26 Ga0070710_10224474 3300005437 Bacteria 1197
27 Ga0070711_100018696 3300005439 Bacteria 4430
28 Ga0070711_100025522 3300005439 Bacteria 3867
29 Ga0070711_100028858 3300005439 Bacteria 3654
30 Ga0070711_100031962 3300005439 Bacteria 3497
31 Ga0070711_100054246 3300005439 Bacteria 2765
32 Ga0070711_100129906 3300005439 Bacteria 1875
33 Ga0070711_100340738 3300005439 Bacteria 1203
34 Ga0070708_100004246 3300005445 Bacteria 11255
35 Ga0070708_100006247 3300005445 Bacteria 9473
36 Ga0070708_100008105 3300005445 Bacteria 8425
37 Ga0070708_100051776 3300005445 Bacteria 3638
38 Ga0070708_100051915 3300005445 Bacteria 3634
39 Ga0070678_100008890 3300005456 Bacteria 6047
40 Ga0070678_100010702 3300005456 Bacteria 5617
41 Ga0070662_100033112 3300005457 Bacteria 3637
42 Ga0070681_10007844 3300005458 Bacteria 10438
43 Ga0068867_100018715 3300005459 Bacteria 4925
44 Ga0070706_100000217 3300005467 Bacteria 70703
45 Ga0070706_100000618 3300005467 Bacteria 41035
46 Ga0070706_100001851 3300005467 Bacteria 21899
47 Ga0070706_100011240 3300005467 Bacteria 8313
48 Ga0070706_100064251 3300005467 Bacteria 3392
49 Ga0070707_100000774 3300005468 Bacteria 31590
50 Ga0070707_100016332 3300005468 Bacteria 6966
51 Ga0070707_100019141 3300005468 Bacteria 6448
52 Ga0070707_100089852 3300005468 Bacteria 2972
53 Ga0070698_100004664 3300005471 Bacteria 15069
54 Ga0070698_100009879 3300005471 Bacteria 10202
55 Ga0070698_100021185 3300005471 Bacteria 6811
56 Ga0070698_100120650 3300005471 Bacteria 2582
57 Ga0070698_100194132 3300005471 Bacteria 1967
58 Ga0070698_100351550 3300005471 Bacteria 1405
59 Ga0070699_100000502 3300005518 Bacteria 37239
60 Ga0070699_100005253 3300005518 Bacteria 11371
61 Ga0070699_100015995 3300005518 Bacteria 6441
62 Ga0070699_100041146 3300005518 Bacteria 4000
63 Ga0070699_100051767 3300005518 Bacteria 3556
64 Ga0070697_100001510 3300005536 Bacteria 17674
65 Ga0070697_100002729 3300005536 Bacteria 13604
66 Ga0070697_100004961 3300005536 Bacteria 10217
67 Ga0070697_100005444 3300005536 Bacteria 9812
68 Ga0070697_100006523 3300005536 Bacteria 9035
69 Ga0070697_100008531 3300005536 Bacteria 8000
70 Ga0070697_100011690 3300005536 Bacteria 6865
71 Ga0070697_100015448 3300005536 Bacteria 5994
72 Ga0070697_100027517 3300005536 Bacteria 4549
73 Ga0070697_100048102 3300005536 Bacteria 3458
74 Ga0070697_100081351 3300005536 Bacteria 2669
75 Ga0070697_100124270 3300005536 Bacteria 2161
76 Ga0070697_100155037 3300005536 Bacteria 1933
77 Ga0070697_100210615 3300005536 Bacteria 1655
78 Ga0070697_100248247 3300005536 Bacteria 1521
79 Ga0070665_100008044 3300005548 Bacteria 10678
80 Ga0068855_100072411 3300005563 Bacteria 4006
81 Ga0068855_100317193 3300005563 Bacteria 1724
82 Ga0070664_100113227 3300005564 Bacteria 2370
83 Ga0070664_100414737 3300005564 Bacteria 1233
84 Ga0068856_100486130 3300005614 Bacteria 1255
85 Ga0068859_100083125 3300005617 Bacteria 3244
86 Ga0068859_100128484 3300005617 Bacteria 2605
87 Ga0068866_10049679 3300005718 Bacteria 2127
88 Ga0068861_100008750 3300005719 Bacteria 6969
89 Ga0068861_100093707 3300005719 Bacteria 2375
90 Ga0068858_100001856 3300005842 Bacteria 21553
91 Ga0068858_100281981 3300005842 Bacteria 1582
92 Ga0068860_100133426 3300005843 Bacteria 2384
93 Ga0068862_100192562 3300005844 Bacteria 1836
94 Ga0081540_1001115 3300005983 Bacteria 23786
95 Ga0070717_10032237 3300006028 Bacteria 4222
96 Ga0070717_10056663 3300006028 Bacteria 3239
97 Ga0070717_10063251 3300006028 Bacteria 3071
98 Ga0070717_10186658 3300006028 Bacteria 1810
99 Ga0070717_10332887 3300006028 Bacteria 1354
100 Ga0070717_10370792 3300006028 Bacteria 1283
101 Ga0070715_10044663 3300006163 Bacteria 1874
102 Ga0070716_100000187 3300006173 Bacteria 24361
103 Ga0070716_100000837 3300006173 Bacteria 13278
104 Ga0070716_100003806 3300006173 Bacteria 7158
105 Ga0070716_100010919 3300006173 Bacteria 4568
106 Ga0070716_100094538 3300006173 Bacteria 1817
107 Ga0070716_100124753 3300006173 Bacteria 1618
108 Ga0070716_100198792 3300006173 Bacteria 1331
109 Ga0070712_100005877 3300006175 Bacteria 7597
110 Ga0070712_100009282 3300006175 Bacteria 6196
111 Ga0070712_100014785 3300006175 Bacteria 5014
112 Ga0070712_100151084 3300006175 Bacteria 1783
113 Ga0070712_100218432 3300006175 Bacteria 1507
114 Ga0097621_100007302 3300006237 Bacteria 7895
115 Ga0068871_100002629 3300006358 Bacteria 12263
116 Ga0068871_100017902 3300006358 Bacteria 5372
117 Ga0075434_100007844 3300006871 Bacteria 9890
118 Ga0068865_100056320 3300006881 Bacteria 2739
119 Ga0075436_100002865 3300006914 Bacteria 11815
120 Ga0075436_100030335 3300006914 Bacteria 3722
121 Ga0097620_100083123 3300006931 Bacteria 3244
122 Ga0097620_100128476 3300006931 Bacteria 2605
123 Ga0075435_100047475 3300007076 Bacteria 3448
124 Ga0075435_100080228 3300007076 Bacteria 2679
125 Ga0075435_100091948 3300007076 Bacteria 2505
126 Ga0099794_10002525 3300007265 Bacteria 6763
127 Ga0099794_10002913 3300007265 Bacteria 6433
128 Ga0099794_10003311 3300007265 Bacteria 6119
129 Ga0099794_10004692 3300007265 Bacteria 5412
130 Ga0099794_10014220 3300007265 Bacteria 3482
131 Ga0099794_10015848 3300007265 Bacteria 3334
132 Ga0099794_10025959 3300007265 Bacteria 2704
133 Ga0099794_10064656 3300007265 Bacteria 1783
134 Ga0099794_10066195 3300007265 Bacteria 1763
135 Ga0099795_10016056 3300007788 Bacteria 2360
136 Ga0099795_10046605 3300007788 Bacteria 1563
137 Ga0105240_10255274 3300009093 Bacteria 2025
138 Ga0105245_10000076 3300009098 Bacteria 102308
139 Ga0105245_10011263 3300009098 Bacteria 7787
140 Ga0105245_10043697 3300009098 Bacteria 3997
141 Ga0114129_10207976 3300009147 Bacteria 2647
142 Ga0114129_10950265 3300009147 Bacteria 1086
143 Ga0105241_10000055 3300009174 Bacteria 86842
144 Ga0105242_10253353 3300009176 Bacteria 1587
145 Ga0105248_10001112 3300009177 Bacteria 29868
146 Ga0105248_10092167 3300009177 Bacteria 3412
147 Ga0105248_10257004 3300009177 Bacteria 1966
148 Ga0105237_10269531 3300009545 Bacteria 1705
149 Ga0105237_10367368 3300009545 Bacteria 1444
150 Ga0105238_10042848 3300009551 Bacteria 4582
151 Ga0099796_10005626 3300010159 Bacteria 3137
152 Ga0105239_10029081 3300010375 Bacteria 6075
153 Ga0157371_10013198 3300013102 Bacteria 6287
154 Ga0157369_10023639 3300013105 Bacteria 6846
155 Ga0157369_10023790 3300013105 Bacteria 6821
156 Ga0157369_10177964 3300013105 Bacteria 2239
157 Ga0157374_10000262 3300013296 Bacteria 48624
158 Ga0157374_10102914 3300013296 Bacteria 2739
159 Ga0157374_10126869 3300013296 Bacteria 2467
160 Ga0157374_10297293 3300013296 Bacteria 1597
161 Ga0157378_10001745 3300013297 Bacteria 19500
162 Ga0157378_10004984 3300013297 Bacteria 11646
163 Ga0157378_10008251 3300013297 Bacteria 9081
164 Ga0157378_10016283 3300013297 Bacteria 6511
165 Ga0157378_10099395 3300013297 Bacteria 2654
166 Ga0163162_10045482 3300013306 Bacteria 4398
167 Ga0163162_10132211 3300013306 Bacteria 2604
168 Ga0157372_10009382 3300013307 Bacteria 10410
169 Ga0157375_10012491 3300013308 Bacteria 7537
170 Ga0157375_10023856 3300013308 Bacteria 5651
171 Ga0157375_10103388 3300013308 Bacteria 2936
172 Ga0157376_10004573 3300014969 Bacteria 9632
173 Ga0157376_10190806 3300014969 Bacteria 1879
174 Ga0163161_10028384 3300017792 Bacteria 3974
175 Ga0213872_10003352 3300021361 Bacteria 8914
176 Ga0213872_10006217 3300021361 Bacteria 6031
177 Ga0213872_10008292 3300021361 Bacteria 5032
178 Ga0213872_10014844 3300021361 Bacteria 3628
179 Ga0213871_10013298 3300021441 Bacteria 1930
180 Ga0207692_10028657 3300025898 Bacteria 2637
181 Ga0207692_10105458 3300025898 Bacteria 1555
182 Ga0207642_10005504 3300025899 Bacteria 4138
183 Ga0207680_10012019 3300025903 Bacteria 4398
184 Ga0207680_10013798 3300025903 Bacteria 4161
185 Ga0207699_10096648 3300025906 Bacteria 1865
186 Ga0207699_10111913 3300025906 Bacteria 1751
187 Ga0207645_10000285 3300025907 Bacteria 42153
188 Ga0207645_10003733 3300025907 Bacteria 11450
189 Ga0207705_10015037 3300025909 Bacteria 5563
190 Ga0207684_10000062 3300025910 Bacteria 202863
191 Ga0207684_10001064 3300025910 Bacteria 30762
192 Ga0207684_10002631 3300025910 Bacteria 17962
193 Ga0207684_10003383 3300025910 Bacteria 15629
194 Ga0207684_10006440 3300025910 Bacteria 10700
195 Ga0207684_10014464 3300025910 Bacteria 6802
196 Ga0207684_10033211 3300025910 Bacteria 4388
197 Ga0207707_10023020 3300025912 Bacteria 5450
198 Ga0207693_10004466 3300025915 Bacteria 11826
199 Ga0207693_10026091 3300025915 Bacteria 4627
200 Ga0207693_10063144 3300025915 Bacteria 2902
201 Ga0207693_10175545 3300025915 Bacteria 1686
202 Ga0207693_10213340 3300025915 Bacteria 1517
203 Ga0207693_10245486 3300025915 Bacteria 1405
204 Ga0207663_10006393 3300025916 Bacteria 6026
205 Ga0207663_10044755 3300025916 Bacteria 2719
206 Ga0207663_10059158 3300025916 Bacteria 2423
207 Ga0207663_10105151 3300025916 Bacteria 1904
208 Ga0207663_10212467 3300025916 Bacteria 1403
209 Ga0207652_10192289 3300025921 Bacteria 1836
210 Ga0207646_10000353 3300025922 Bacteria 62321
211 Ga0207646_10000666 3300025922 Bacteria 44524
212 Ga0207646_10007389 3300025922 Bacteria 11182
213 Ga0207646_10023817 3300025922 Bacteria 5618
214 Ga0207646_10047489 3300025922 Bacteria 3850
215 Ga0207646_10055198 3300025922 Bacteria 3552
216 Ga0207646_10070189 3300025922 Bacteria 3129
217 Ga0207646_10108306 3300025922 Bacteria 2493
218 Ga0207681_10041737 3300025923 Bacteria 3060
219 Ga0207681_10049025 3300025923 Bacteria 2853
220 Ga0207694_10018185 3300025924 Bacteria 5314
221 Ga0207659_10095404 3300025926 Bacteria 2230
222 Ga0207687_10000104 3300025927 Bacteria 61420
223 Ga0207700_10013195 3300025928 Bacteria 5366
224 Ga0207700_10027921 3300025928 Bacteria 3958
225 Ga0207700_10155065 3300025928 Bacteria 1897
226 Ga0207700_10214458 3300025928 Bacteria 1629
227 Ga0207664_10007331 3300025929 Bacteria 7644
228 Ga0207664_10032926 3300025929 Bacteria 3977
229 Ga0207664_10291479 3300025929 Bacteria 1434
230 Ga0207664_10302499 3300025929 Bacteria 1407
231 Ga0207706_10000206 3300025933 Bacteria 65055
232 Ga0207706_10006128 3300025933 Bacteria 11164
233 Ga0207704_10017290 3300025938 Bacteria 3734
234 Ga0207704_10051076 3300025938 Bacteria 2498
235 Ga0207704_10167650 3300025938 Bacteria 1571
236 Ga0207665_10000108 3300025939 Bacteria 54035
237 Ga0207665_10000136 3300025939 Bacteria 48958
238 Ga0207665_10002558 3300025939 Bacteria 12210
239 Ga0207665_10005404 3300025939 Bacteria 8532
240 Ga0207665_10009607 3300025939 Bacteria 6353
241 Ga0207665_10010555 3300025939 Bacteria 6067
242 Ga0207665_10026201 3300025939 Bacteria 3848
243 Ga0207665_10038105 3300025939 Bacteria 3200
244 Ga0207665_10041933 3300025939 Bacteria 3058
245 Ga0207665_10076782 3300025939 Bacteria 2292
246 Ga0207665_10170113 3300025939 Bacteria 1573
247 Ga0207691_10286771 3300025940 Bacteria 1416
248 Ga0207711_10022664 3300025941 Bacteria 5253
249 Ga0207711_10053520 3300025941 Bacteria 3461
250 Ga0207689_10008848 3300025942 Bacteria 8742
251 Ga0207689_10046027 3300025942 Bacteria 3607
252 Ga0207679_10226746 3300025945 Bacteria 1575
253 Ga0207667_10278910 3300025949 Bacteria 1708
254 Ga0207668_10026562 3300025972 Bacteria 3760
255 Ga0207658_10015160 3300025986 Bacteria 5286
256 Ga0207703_10060457 3300026035 Bacteria 3098
257 Ga0207678_10099424 3300026067 Bacteria 2485
258 Ga0207648_10014803 3300026089 Bacteria 7197
259 Ga0207676_10075027 3300026095 Bacteria 2727
260 Ga0207675_100129511 3300026118 Bacteria 2392
261 Ga0207683_10001311 3300026121 Bacteria 22474
262 Ga0207683_10005267 3300026121 Bacteria 11100
263 Ga0209588_1000061 3300027671 Bacteria 38272
264 Ga0209588_1002326 3300027671 Bacteria 5146
265 Ga0209588_1005644 3300027671 Bacteria 3595
266 Ga0209588_1010016 3300027671 Bacteria 2843
267 Ga0209588_1011676 3300027671 Bacteria 2657
268 Ga0209588_1013757 3300027671 Bacteria 2472
269 Ga0209588_1015782 3300027671 Bacteria 2324
270 Ga0209588_1021822 3300027671 Bacteria 2013
271 Ga0209588_1022470 3300027671 Bacteria 1984
272 Ga0209588_1027668 3300027671 Bacteria 1805
273 Ga0265356_1001772 3300028017 Bacteria 3061
274 Ga0265356_1002854 3300028017 Bacteria 2238
275 Ga0268266_10018002 3300028379 Bacteria 6023
276 Ga0268265_10145249 3300028380 Bacteria 1992
277 Ga0268264_10050409 3300028381 Bacteria 3466
278 Ga0268264_10190770 3300028381 Bacteria 1868
279 Ga0265338_10020367 3300028800 Bacteria 6982
280 Ga0265338_10128688 3300028800 Bacteria 2004
281 Ga0265760_10000126 3300031090 Bacteria 19409
282 Ga0265760_10009642 3300031090 Unclassified 2758
283 Ga0265760_10042136 3300031090 Bacteria 1362
284 Ga0265325_10022047 3300031241 Bacteria 3492
285 Ga0373943_0127276 3300035170 Bacteria 1360
286 Ga0373924_0000115 3300035410 Bacteria 22993
287 Ga0373937_0195929 3300036401 Bacteria 1899
288 Ga0395905_0105041 3300037471 Bacteria 2652
289 Ga0436360_0348342 3300039438 Bacteria 4743
290 Ga0436360_0570983 3300039438 Bacteria 2476
291 Ga0436360_0595397 3300039438 Bacteria 6153
292 Ga0436360_0786112 3300039438 Bacteria 2728
293 Ga0436361_0161718 3300039447 Bacteria 36900
294 Ga0436361_0388718 3300039447 Bacteria 5595
295 Ga0436361_0497865 3300039447 Bacteria 3616
296 Ga0436363_1301642 3300039450 Bacteria 2929
297 Ga0451576_0212164 3300045051 Bacteria 2022
298 Ga0495592_0150822 3300046454 Bacteria 1608
299 Ga0495580_0148027 3300046472 Bacteria 1627
300 Ga0495646_0095795 3300046680 Bacteria 1707
301 Ga0496102_0002379 3300048905 Bacteria 16049
302 Ga0496105_0002100 3300048908 Bacteria 14418
303 Ga0496106_0385864 3300048909 Bacteria 1126
304 Ga0496112_0006414 3300048915 Bacteria 10325
305 Ga0496112_0021681 3300048915 Bacteria 6112
306 Ga0496126_0142724 3300048929 Bacteria 2060
307 nmdc:mga05p37_75784_c1 3300050507 Bacteria 4141
308 nmdc:mga0n895_30328_c1 3300050512 Bacteria 5167
309 nmdc:mga0rr50_36105_c1 3300050513 Bacteria 3556
310 nmdc:mga08x19_11673_c1 3300050514 Bacteria 5289
311 nmdc:mga08x19_3395_c1 3300050514 Bacteria 9497
312 Ga0070698_100028558
313 Ga0070658_10027520
314 Ga0070670_100243582
315 Ga0068869_100026199
316 Ga0070666_10004557
317 Ga0070680_100185611
318 Ga0068868_100001050
319 Ga0068868_100017005
320 Ga0070668_100010715
321 Ga0070668_100142776
322 Ga0070669_100018179
323 Ga0070675_100032963
324 Ga0070675_100114536
325 Ga0070667_100000846
326 Ga0070709_10071158
327 Ga0070709_10097958
328 Ga0070709_10146080
329 Ga0070714_100008501
330 Ga0070713_100018196
331 Ga0070713_100192063
332 Ga0070713_100261871
333 Ga0070710_10005360
334 Ga0070710_10019723
335 Ga0070710_10027477
336 Ga0070710_10059675
337 Ga0070710_10224474
338 Ga0070711_100018696
339 Ga0070711_100025522
340 Ga0070711_100028858
341 Ga0070711_100031962
342 Ga0070711_100054246
343 Ga0070711_100129906
344 Ga0070711_100340738
345 Ga0070708_100004246
346 Ga0070708_100006247
347 Ga0070708_100008105
348 Ga0070708_100051776
349 Ga0070708_100051915
350 Ga0070678_100008890
351 Ga0070678_100010702
352 Ga0070662_100033112
353 Ga0070681_10007844
354 Ga0068867_100018715
355 Ga0070706_100000217
356 Ga0070706_100000618
357 Ga0070706_100001851
358 Ga0070706_100011240
359 Ga0070706_100064251
360 Ga0070707_100000774
361 Ga0070707_100016332
362 Ga0070707_100019141
363 Ga0070707_100089852
364 Ga0070698_100004664
365 Ga0070698_100009879
366 Ga0070698_100021185
367 Ga0070698_100120650
368 Ga0070698_100194132
369 Ga0070698_100351550
370 Ga0070699_100000502
371 Ga0070699_100005253
372 Ga0070699_100015995
373 Ga0070699_100041146
374 Ga0070699_100051767
375 Ga0070697_100001510
376 Ga0070697_100002729
377 Ga0070697_100004961
378 Ga0070697_100005444
379 Ga0070697_100006523
380 Ga0070697_100008531
381 Ga0070697_100011690
382 Ga0070697_100015448
383 Ga0070697_100027517
384 Ga0070697_100048102
385 Ga0070697_100081351
386 Ga0070697_100124270
387 Ga0070697_100155037
388 Ga0070697_100210615
389 Ga0070697_100248247
390 Ga0070665_100008044
391 Ga0068855_100072411
392 Ga0068855_100317193
393 Ga0070664_100113227
394 Ga0070664_100414737
395 Ga0068856_100486130
396 Ga0068859_100083125
397 Ga0068859_100128484
398 Ga0068866_10049679
399 Ga0068861_100008750
400 Ga0068861_100093707
401 Ga0068858_100001856
402 Ga0068858_100281981
403 Ga0068860_100133426
404 Ga0068862_100192562
405 Ga0081540_1001115
406 Ga0070717_10032237
407 Ga0070717_10056663
408 Ga0070717_10063251
409 Ga0070717_10186658
410 Ga0070717_10332887
411 Ga0070717_10370792
412 Ga0070715_10044663
413 Ga0070716_100000187
414 Ga0070716_100000837
415 Ga0070716_100003806
416 Ga0070716_100010919
417 Ga0070716_100094538
418 Ga0070716_100124753
419 Ga0070716_100198792
420 Ga0070712_100005877
421 Ga0070712_100009282
422 Ga0070712_100014785
423 Ga0070712_100151084
424 Ga0070712_100218432
425 Ga0097621_100007302
426 Ga0068871_100002629
427 Ga0068871_100017902
428 Ga0075434_100007844
429 Ga0068865_100056320
430 Ga0075436_100002865
431 Ga0075436_100030335
432 Ga0097620_100083123
433 Ga0097620_100128476
434 Ga0075435_100047475
435 Ga0075435_100080228
436 Ga0075435_100091948
437 Ga0099794_10002525
438 Ga0099794_10002913
439 Ga0099794_10003311
440 Ga0099794_10004692
441 Ga0099794_10014220
442 Ga0099794_10015848
443 Ga0099794_10025959
444 Ga0099794_10064656
445 Ga0099794_10066195
446 Ga0099795_10016056
447 Ga0099795_10046605
448 Ga0105240_10255274
449 Ga0105245_10000076
450 Ga0105245_10011263
451 Ga0105245_10043697
452 Ga0114129_10207976
453 Ga0114129_10950265
454 Ga0105241_10000055
455 Ga0105242_10253353
456 Ga0105248_10001112
457 Ga0105248_10092167
458 Ga0105248_10257004
459 Ga0105237_10269531
460 Ga0105237_10367368
461 Ga0105238_10042848
462 Ga0099796_10005626
463 Ga0105239_10029081
464 Ga0157371_10013198
465 Ga0157369_10023639
466 Ga0157369_10023790
467 Ga0157369_10177964
468 Ga0157374_10000262
469 Ga0157374_10102914
470 Ga0157374_10126869
471 Ga0157374_10297293
472 Ga0157378_10001745
473 Ga0157378_10004984
474 Ga0157378_10008251
475 Ga0157378_10016283
476 Ga0157378_10099395
477 Ga0163162_10045482
478 Ga0163162_10132211
479 Ga0157372_10009382
480 Ga0157375_10012491
481 Ga0157375_10023856
482 Ga0157375_10103388
483 Ga0157376_10004573
484 Ga0157376_10190806
485 Ga0163161_10028384
486 Ga0213872_10003352
487 Ga0213872_10006217
488 Ga0213872_10008292
489 Ga0213872_10014844
490 Ga0213871_10013298
491 Ga0207692_10028657
492 Ga0207692_10105458
493 Ga0207642_10005504
494 Ga0207680_10012019
495 Ga0207680_10013798
496 Ga0207699_10096648
497 Ga0207699_10111913
498 Ga0207645_10000285
499 Ga0207645_10003733
500 Ga0207705_10015037
501 Ga0207684_10000062
502 Ga0207684_10001064
503 Ga0207684_10002631
504 Ga0207684_10003383
505 Ga0207684_10006440
506 Ga0207684_10014464
507 Ga0207684_10033211
508 Ga0207707_10023020
509 Ga0207693_10004466
510 Ga0207693_10026091
511 Ga0207693_10063144
512 Ga0207693_10175545
513 Ga0207693_10213340
514 Ga0207693_10245486
515 Ga0207663_10006393
516 Ga0207663_10044755
517 Ga0207663_10059158
518 Ga0207663_10105151
519 Ga0207663_10212467
520 Ga0207652_10192289
521 Ga0207646_10000353
522 Ga0207646_10000666
523 Ga0207646_10007389
524 Ga0207646_10023817
525 Ga0207646_10047489
526 Ga0207646_10055198
527 Ga0207646_10070189
528 Ga0207646_10108306
529 Ga0207681_10041737
530 Ga0207681_10049025
531 Ga0207694_10018185
532 Ga0207659_10095404
533 Ga0207687_10000104
534 Ga0207700_10013195
535 Ga0207700_10027921
536 Ga0207700_10155065
537 Ga0207700_10214458
538 Ga0207664_10007331
539 Ga0207664_10032926
540 Ga0207664_10291479
541 Ga0207664_10302499
542 Ga0207706_10000206
543 Ga0207706_10006128
544 Ga0207704_10017290
545 Ga0207704_10051076
546 Ga0207704_10167650
547 Ga0207665_10000108
548 Ga0207665_10000136
549 Ga0207665_10002558
550 Ga0207665_10005404
551 Ga0207665_10009607
552 Ga0207665_10010555
553 Ga0207665_10026201
554 Ga0207665_10038105
555 Ga0207665_10041933
556 Ga0207665_10076782
557 Ga0207665_10170113
558 Ga0207691_10286771
559 Ga0207711_10022664
560 Ga0207711_10053520
561 Ga0207689_10008848
562 Ga0207689_10046027
563 Ga0207679_10226746
564 Ga0207667_10278910
565 Ga0207668_10026562
566 Ga0207658_10015160
567 Ga0207703_10060457
568 Ga0207678_10099424
569 Ga0207648_10014803
570 Ga0207676_10075027
571 Ga0207675_100129511
572 Ga0207683_10001311
573 Ga0207683_10005267
574 Ga0209588_1000061
575 Ga0209588_1002326
576 Ga0209588_1005644
577 Ga0209588_1010016
578 Ga0209588_1011676
579 Ga0209588_1013757
580 Ga0209588_1015782
581 Ga0209588_1021822
582 Ga0209588_1022470
583 Ga0209588_1027668
584 Ga0265356_1001772
585 Ga0265356_1002854
586 Ga0268266_10018002
587 Ga0268265_10145249
588 Ga0268264_10050409
589 Ga0268264_10190770
590 Ga0265338_10020367
591 Ga0265338_10128688
592 Ga0265760_10000126
593 Ga0265760_10009642
594 Ga0265760_10042136
595 Ga0265325_10022047
596 Ga0373943_0127276
597 Ga0373924_0000115
598 Ga0373937_0195929
599 Ga0395905_0105041
600 Ga0436360_0348342
601 Ga0436360_0570983
602 Ga0436360_0595397
603 Ga0436360_0786112
604 Ga0436361_0161718
605 Ga0436361_0388718
606 Ga0436361_0497865
607 Ga0436363_1301642
608 Ga0451576_0212164
609 Ga0495592_0150822
610 Ga0495580_0148027
611 Ga0495646_0095795
612 Ga0496102_0002379
613 Ga0496105_0002100
614 Ga0496106_0385864
615 Ga0496112_0006414
616 Ga0496112_0021681
617 Ga0496126_0142724
618 nmdc:mga05p37_75784_c1
619 nmdc:mga0n895_30328_c1
620 nmdc:mga0rr50_36105_c1
621 nmdc:mga08x19_11673_c1
622 nmdc:mga08x19_3395_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

65

232

0.99

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

66

236

0.93

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

89

227

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bs1-assembly1.cif.gz_A-1 mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition 0.9083 196 264
2c96-assembly1.cif.gz_A structural basis of the nucleotide driven conformational changes in the aaa domain of transcription activator pspf 0.8971 22 260
1ojl-assembly2.cif.gz_F-3 crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding 0.8937 21 258
2c9c-assembly1.cif.gz_A structural basis of the nucleotide driven conformational changes in the aaa domain of transcription activator pspf 0.8923 22 260
1ny6-assembly1.cif.gz_B crystal structure of sigm54 activator (aaa+ atpase) in the active state 0.8884 25 257
ID Description Score Start End Superfamily
af_Q06065_316_382_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9529 194 258 1.10.8.60
1ny5B03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9424 196 258 1.10.8.60
1ny6B02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9374 194 257 1.10.8.60
1ojlE02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9346 194 258 1.10.8.60
1ny6M02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9301 194 258 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A537PCK2-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9199 117 258 GO:0005524
GO:0006355
AF-A0A3M4D1Z6-F1-model_v4 deleted 0.8987 120 262
AF-A0A656K1W0-F1-model_v4 Sigma-54 dependent transcriptional regulator 0.8907 21 243 GO:0005524
GO:0006355
GO:0016887
AF-A0A2L2N8A4-F1-model_v4 Acetoacetate metabolism regulatory protein AtoC 0.8898 22 260 GO:0000160
GO:0005524
GO:0006355
GO:0016887
AF-A0A2V8EE79-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.889 19 259 GO:0005524
GO:0006355
GO:0016887

Map