F402686

General Info

Members Datasets Scaffolds Average Seq Length
314 163 628 252

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_10663629|Ga0163162_106636292
Length 282
Sequence VIREQRKLAAYHCSVITDHEDQLARRLKLIIAYNGAPFAGWQSQSHRNTIQDRLERAFERVLGKPARVHGAGRTDAGVHSLAQCAHIDLPNDRLSAARWGEALNALLPPTIRVLRCQYVSNDFHARLSAKGKIYRYRLWVSSVLPPFEYGRAWHIPRPVDLTILRRAARQFVGTHDFAGFAANRGKSGRRGDTDSSRGEQEKSTIRTIYSARVRKTGPCVTIEFDGDGFLYKMVRLIVGTLVRSALGKVSIENVAARLNSGQVSAPRFAAPAEGLSLVRVRY

Samples

Sample ID Description Type Environment
1 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
86 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
87 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
95 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
105 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
111 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
112 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
146 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
147 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
150 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
159 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
160 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
162 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
163 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.91
Rhizosphere 98.09
Stem 0
Stem Tuber 0
Unclassified 17.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163162_10663629 3300013306 Bacteria 1166
2 JGI25406J46586_10000003 3300003203 Bacteria 161718
3 JGI25405J52794_10001961 3300003911 Bacteria 3487
4 Ga0065704_10159025 3300005289 Unclassified 1368
5 Ga0065712_10082560 3300005290 Unclassified 2906
6 Ga0065712_10156508 3300005290 Bacteria 1331
7 Ga0065712_10228406 3300005290 Bacteria 1019
8 Ga0065715_10099189 3300005293 Bacteria 3446
9 Ga0065715_10274404 3300005293 Bacteria 1100
10 Ga0070675_100006460 3300005354 Bacteria 9000
11 Ga0070671_100017257 3300005355 Bacteria 5844
12 Ga0070674_100004233 3300005356 Bacteria 8157
13 Ga0070673_100035054 3300005364 Unclassified 3803
14 Ga0070703_10042215 3300005406 Bacteria 1425
15 Ga0070709_10188743 3300005434 Bacteria 1452
16 Ga0070713_100010464 3300005436 Bacteria 6700
17 Ga0070711_100014498 3300005439 Bacteria 4967
18 Ga0070711_100026906 3300005439 Unclassified 3772
19 Ga0070705_100008408 3300005440 Bacteria 5113
20 Ga0070705_100056818 3300005440 Bacteria 2306
21 Ga0070694_100003186 3300005444 Bacteria 9787
22 Ga0070708_100002212 3300005445 Bacteria 15036
23 Ga0070708_100014545 3300005445 Bacteria 6481
24 Ga0070708_100043418 3300005445 Bacteria 3950
25 Ga0070708_100051045 3300005445 Bacteria 3663
26 Ga0070708_100077078 3300005445 Bacteria 3012
27 Ga0070708_100089292 3300005445 Bacteria 2804
28 Ga0070708_100153639 3300005445 Bacteria 2141
29 Ga0070708_100274238 3300005445 Bacteria 1587
30 Ga0070706_100000703 3300005467 Bacteria 37785
31 Ga0070706_100001123 3300005467 Bacteria 28956
32 Ga0070706_100018800 3300005467 Bacteria 6371
33 Ga0070706_100044979 3300005467 Unclassified 4078
34 Ga0070706_100046036 3300005467 Bacteria 4027
35 Ga0070706_100049163 3300005467 Bacteria 3891
36 Ga0070706_100068322 3300005467 Bacteria 3286
37 Ga0070706_100131744 3300005467 Bacteria 2333
38 Ga0070706_100201150 3300005467 Bacteria 1861
39 Ga0070706_100223261 3300005467 Unclassified 1759
40 Ga0070706_100310657 3300005467 Bacteria 1470
41 Ga0070706_100442062 3300005467 Bacteria 1210
42 Ga0070707_100000632 3300005468 Bacteria 35270
43 Ga0070707_100023505 3300005468 Bacteria 5830
44 Ga0070707_100059764 3300005468 Bacteria 3655
45 Ga0070707_100100857 3300005468 Bacteria 2797
46 Ga0070707_100108122 3300005468 Bacteria 2698
47 Ga0070707_100134357 3300005468 Unclassified 2406
48 Ga0070707_100154716 3300005468 Unclassified 2234
49 Ga0070707_100383988 3300005468 Bacteria 1364
50 Ga0070707_100390662 3300005468 Bacteria 1351
51 Ga0070698_100002192 3300005471 Bacteria 21683
52 Ga0070698_100010580 3300005471 Bacteria 9832
53 Ga0070698_100037523 3300005471 Bacteria 4995
54 Ga0070698_100063332 3300005471 Bacteria 3729
55 Ga0070699_100007799 3300005518 Bacteria 9305
56 Ga0070699_100013075 3300005518 Bacteria 7153
57 Ga0070699_100020916 3300005518 Bacteria 5642
58 Ga0070699_100118162 3300005518 Bacteria 2331
59 Ga0070699_100164101 3300005518 Unclassified 1967
60 Ga0070699_100409207 3300005518 Bacteria 1227
61 Ga0070699_100566288 3300005518 Bacteria 1035
62 Ga0070679_100059668 3300005530 Bacteria 3802
63 Ga0070697_100001049 3300005536 Bacteria 20868
64 Ga0070697_100001245 3300005536 Bacteria 19255
65 Ga0070697_100012735 3300005536 Bacteria 6586
66 Ga0070697_100024909 3300005536 Bacteria 4766
67 Ga0070697_100029524 3300005536 Bacteria 4397
68 Ga0070697_100062613 3300005536 Bacteria 3037
69 Ga0070697_100071054 3300005536 Bacteria 2854
70 Ga0070697_100078124 3300005536 Bacteria 2723
71 Ga0070697_100180316 3300005536 Unclassified 1790
72 Ga0070697_100310372 3300005536 Unclassified 1357
73 Ga0070697_100520775 3300005536 Bacteria 1041
74 Ga0070672_100190503 3300005543 Unclassified 1712
75 Ga0070695_100001047 3300005545 Bacteria 15113
76 Ga0070696_100003362 3300005546 Bacteria 10670
77 Ga0070696_100367566 3300005546 Bacteria 1118
78 Ga0070693_100000147 3300005547 Bacteria 32057
79 Ga0070665_100000881 3300005548 Bacteria 38514
80 Ga0070665_100277550 3300005548 Bacteria 1677
81 Ga0070704_100003957 3300005549 Bacteria 8534
82 Ga0068852_100497875 3300005616 Bacteria 1213
83 Ga0068859_100031306 3300005617 Bacteria 5342
84 Ga0068859_100704759 3300005617 Bacteria 1100
85 Ga0068863_100038279 3300005841 Bacteria 4563
86 Ga0068858_100053108 3300005842 Bacteria 3749
87 Ga0068860_100294371 3300005843 Bacteria 1589
88 Ga0081455_10001323 3300005937 Bacteria 30691
89 Ga0081455_10009017 3300005937 Bacteria 10297
90 Ga0081455_10011524 3300005937 Bacteria 8878
91 Ga0081455_10085911 3300005937 Unclassified 2563
92 Ga0081455_10204831 3300005937 Unclassified 1474
93 Ga0081540_1000196 3300005983 Bacteria 62801
94 Ga0081540_1007057 3300005983 Bacteria 8073
95 Ga0081539_10000077 3300005985 Bacteria 228125
96 Ga0070717_10000625 3300006028 Bacteria 22766
97 Ga0070717_10012563 3300006028 Bacteria 6460
98 Ga0070717_10039698 3300006028 Unclassified 3830
99 Ga0070717_10202675 3300006028 Bacteria 1738
100 Ga0070716_100131005 3300006173 Bacteria 1585
101 Ga0070712_100012145 3300006175 Bacteria 5474
102 Ga0070712_100038684 3300006175 Bacteria 3261
103 Ga0070712_100255224 3300006175 Bacteria 1403
104 Ga0097621_100008998 3300006237 Bacteria 7226
105 Ga0068871_100024966 3300006358 Bacteria 4643
106 Ga0075434_100127114 3300006871 Unclassified 2566
107 Ga0075436_100024953 3300006914 Bacteria 4110
108 Ga0075436_100056645 3300006914 Bacteria 2707
109 Ga0097620_100031306 3300006931 Bacteria 5342
110 Ga0097620_100704797 3300006931 Bacteria 1100
111 Ga0075435_100123314 3300007076 Unclassified 2164
112 Ga0075435_100242313 3300007076 Unclassified 1534
113 Ga0099794_10010985 3300007265 Bacteria 3866
114 Ga0099794_10016271 3300007265 Bacteria 3294
115 Ga0105247_10317531 3300009101 Bacteria 1086
116 Ga0114129_10022815 3300009147 Bacteria 8873
117 Ga0105248_10292171 3300009177 Bacteria 1835
118 Ga0105249_10153409 3300009553 Unclassified 2220
119 Ga0157374_10000649 3300013296 Bacteria 30659
120 Ga0157374_10003199 3300013296 Bacteria 13758
121 Ga0157378_10044205 3300013297 Bacteria 3955
122 Ga0157378_10047758 3300013297 Bacteria 3806
123 Ga0157378_10057430 3300013297 Bacteria 3468
124 Ga0157378_10071353 3300013297 Bacteria 3119
125 Ga0157378_10643733 3300013297 Unclassified 1075
126 Ga0157378_10649261 3300013297 Bacteria 1071
127 Ga0163162_10000794 3300013306 Bacteria 29387
128 Ga0157375_10001078 3300013308 Bacteria 23670
129 Ga0157375_10002725 3300013308 Bacteria 15265
130 Ga0157375_10343830 3300013308 Bacteria 1657
131 Ga0157375_10344798 3300013308 Bacteria 1655
132 Ga0157376_10001758 3300014969 Bacteria 14431
133 Ga0207697_10000321 3300025315 Bacteria 26793
134 Ga0207697_10009446 3300025315 Bacteria 4213
135 Ga0207692_10234026 3300025898 Unclassified 1094
136 Ga0207688_10008107 3300025901 Bacteria 5711
137 Ga0207680_10054561 3300025903 Unclassified 2405
138 Ga0207680_10153763 3300025903 Unclassified 1536
139 Ga0207699_10161604 3300025906 Bacteria 1491
140 Ga0207684_10000411 3300025910 Bacteria 57343
141 Ga0207684_10008777 3300025910 Bacteria 8975
142 Ga0207684_10036311 3300025910 Bacteria 4184
143 Ga0207684_10045449 3300025910 Bacteria 3725
144 Ga0207684_10091345 3300025910 Bacteria 2595
145 Ga0207684_10098535 3300025910 Bacteria 2497
146 Ga0207684_10124978 3300025910 Unclassified 2207
147 Ga0207684_10197119 3300025910 Bacteria 1737
148 Ga0207684_10272125 3300025910 Bacteria 1461
149 Ga0207684_10442264 3300025910 Unclassified 1116
150 Ga0207693_10071050 3300025915 Bacteria 2724
151 Ga0207663_10106513 3300025916 Unclassified 1895
152 Ga0207649_10180324 3300025920 Unclassified 1478
153 Ga0207646_10003048 3300025922 Bacteria 19286
154 Ga0207646_10003509 3300025922 Bacteria 17668
155 Ga0207646_10021605 3300025922 Bacteria 5942
156 Ga0207646_10101683 3300025922 Bacteria 2577
157 Ga0207646_10108661 3300025922 Bacteria 2489
158 Ga0207646_10145641 3300025922 Bacteria 2134
159 Ga0207646_10317185 3300025922 Bacteria 1408
160 Ga0207681_10338917 3300025923 Unclassified 1200
161 Ga0207650_10002120 3300025925 Bacteria 13866
162 Ga0207650_10091498 3300025925 Unclassified 2325
163 Ga0207659_10127104 3300025926 Unclassified 1962
164 Ga0207700_10016979 3300025928 Unclassified 4849
165 Ga0207644_10005502 3300025931 Bacteria 8247
166 Ga0207644_10037290 3300025931 Bacteria 3419
167 Ga0207686_10028529 3300025934 Bacteria 3282
168 Ga0207669_10286808 3300025937 Unclassified 1244
169 Ga0207665_10035170 3300025939 Unclassified 3324
170 Ga0207665_10069057 3300025939 Bacteria 2409
171 Ga0207665_10317770 3300025939 Unclassified 1168
172 Ga0207665_10319744 3300025939 Bacteria 1164
173 Ga0207691_10000830 3300025940 Bacteria 30854
174 Ga0207691_10456761 3300025940 Unclassified 1086
175 Ga0207711_10685246 3300025941 Unclassified 956
176 Ga0207661_10274953 3300025944 Unclassified 1504
177 Ga0207651_10055196 3300025960 Unclassified 2727
178 Ga0207703_10118011 3300026035 Bacteria 2274
179 Ga0207703_10232453 3300026035 Bacteria 1654
180 Ga0207641_10031502 3300026088 Bacteria 4398
181 Ga0207683_10001502 3300026121 Bacteria 21019
182 Ga0209588_1002607 3300027671 Bacteria 4909
183 Ga0209588_1002905 3300027671 Bacteria 4708
184 Ga0268266_10000438 3300028379 Bacteria 62337
185 Ga0268266_10122474 3300028379 Unclassified 2316
186 Ga0268266_10551343 3300028379 Bacteria 1105
187 Ga0268265_10091255 3300028380 Unclassified 2436
188 Ga0268264_10173446 3300028381 Bacteria 1952
189 Ga0265760_10006631 3300031090 Unclassified 3311
190 Ga0373957_0130832 3300035120 Bacteria 1021
191 Ga0373947_0213727 3300035725 Bacteria 1266
192 Ga0373937_0006760 3300036401 Bacteria 9900
193 Ga0373937_0977915 3300036401 Bacteria 795
194 Ga0373925_0143118 3300037068 Bacteria 1873
195 Ga0395900_0001895 3300037418 Bacteria 23792
196 Ga0395900_0562609 3300037418 Bacteria 1084
197 Ga0395898_0003099 3300037466 Bacteria 18810
198 Ga0395905_0017074 3300037471 Bacteria 6892
199 Ga0395901_0000371 3300038443 Bacteria 53982
200 Ga0395901_0487289 3300038443 Unclassified 1257
201 Ga0439451_036372 3300042009 Bacteria 990
202 Ga0451577_0005191 3300042876 Bacteria 13396
203 Ga0495592_0035652 3300046454 Bacteria 3749
204 Ga0495629_0119841 3300046459 Bacteria 1833
205 Ga0495641_0033659 3300046461 Bacteria 2430
206 Ga0495651_0026532 3300046462 Bacteria 4512
207 Ga0495580_0006952 3300046472 Bacteria 9126
208 Ga0495580_0066355 3300046472 Bacteria 2526
209 Ga0495582_0000093 3300046473 Bacteria 46052
210 Ga0495582_0001344 3300046473 Bacteria 13808
211 Ga0495639_0013200 3300046475 Unclassified 3565
212 Ga0495664_0239708 3300046477 Bacteria 1097
213 Ga0495594_0022214 3300046499 Unclassified 3392
214 Ga0495618_0034497 3300046514 Unclassified 3173
215 Ga0495628_0040613 3300046516 Bacteria 3717
216 Ga0495630_0091974 3300046517 Bacteria 2292
217 Ga0495666_0016863 3300046526 Bacteria 3637
218 Ga0495666_0117658 3300046526 Bacteria 1246
219 Ga0495652_0045774 3300046529 Bacteria 3759
220 Ga0495640_0021789 3300046533 Unclassified 4694
221 Ga0495586_0090209 3300046535 Bacteria 1692
222 Ga0495645_0015142 3300046543 Bacteria 5483
223 Ga0495634_0055912 3300046642 Bacteria 2638
224 Ga0495635_0183623 3300046663 Bacteria 1421
225 Ga0495599_0136549 3300046678 Bacteria 1522
226 Ga0495647_0003880 3300046681 Unclassified 4823
227 Ga0495647_0147061 3300046681 Bacteria 1008
228 Ga0495658_0219236 3300046683 Bacteria 1190
229 Ga0495658_0414244 3300046683 Bacteria 859
230 Ga0495613_0055910 3300046689 Unclassified 2898
231 Ga0495624_0021400 3300046690 Unclassified 4289
232 Ga0495600_0412330 3300046809 Bacteria 839
233 Ga0495674_0031969 3300047319 Unclassified 4776
234 Ga0495674_0077233 3300047319 Bacteria 2863
235 Ga0495676_0021115 3300047321 Bacteria 5698
236 Ga0495680_0083620 3300047322 Bacteria 2406
237 Ga0495675_0011467 3300047444 Bacteria 5565
238 Ga0495684_0004895 3300047471 Bacteria 10448
239 Ga0495684_0348699 3300047471 Bacteria 1051
240 Ga0495602_0151918 3300048088 Bacteria 1819
241 Ga0496101_0118466 3300048904 Bacteria 2000
242 Ga0496108_0037585 3300048911 Unclassified 4034
243 Ga0496109_0143916 3300048912 Bacteria 2230
244 Ga0496112_0110818 3300048915 Bacteria 2715
245 Ga0496114_0072899 3300048917 Bacteria 2889
246 Ga0496115_0032378 3300048918 Bacteria 4124
247 Ga0501031_0111750 3300049568 Bacteria 1784
248 Ga0501032_0002560 3300049569 Bacteria 14231
249 Ga0501032_0029232 3300049569 Bacteria 3784
250 Ga0501033_0056444 3300049570 Bacteria 2902
251 Ga0501034_0024806 3300049571 Bacteria 6101
252 Ga0501034_0152922 3300049571 Bacteria 2282
253 Ga0501034_0227068 3300049571 Bacteria 1817
254 Ga0501034_0384714 3300049571 Bacteria 1327
255 Ga0501036_0025211 3300049572 Bacteria 5017
256 Ga0501036_0174271 3300049572 Bacteria 1812
257 Ga0501036_0442180 3300049572 Bacteria 1083
258 Ga0501037_0057530 3300049573 Bacteria 2838
259 Ga0501038_0015486 3300049574 Bacteria 6930
260 Ga0501038_0086087 3300049574 Bacteria 2641
261 Ga0501039_0001928 3300049575 Bacteria 15372
262 Ga0501043_0005957 3300049579 Bacteria 9805
263 Ga0501043_0014161 3300049579 Bacteria 6240
264 Ga0501043_0094417 3300049579 Bacteria 2351
265 Ga0501043_0368557 3300049579 Bacteria 1089
266 Ga0501046_0016307 3300049580 Bacteria 6225
267 Ga0501046_0065857 3300049580 Bacteria 2825
268 Ga0501046_0105647 3300049580 Bacteria 2156
269 Ga0501047_0000303 3300049581 Bacteria 56793
270 Ga0501047_0025757 3300049581 Bacteria 5656
271 Ga0501047_0029274 3300049581 Bacteria 5311
272 Ga0501047_0149688 3300049581 Bacteria 2210
273 Ga0501047_0214604 3300049581 Bacteria 1781
274 Ga0501048_0094600 3300049582 Bacteria 2107
275 Ga0501048_0189306 3300049582 Bacteria 1458
276 Ga0501048_0258773 3300049582 Bacteria 1236
277 Ga0501048_0273154 3300049582 Bacteria 1201
278 Ga0501067_0155937 3300049583 Unclassified 1272
279 Ga0501068_0212564 3300049584 Bacteria 1228
280 Ga0501069_0015168 3300049585 Bacteria 4129
281 Ga0501069_0023465 3300049585 Bacteria 3364
282 Ga0501070_0100870 3300049586 Bacteria 2388
283 Ga0501070_0385455 3300049586 Bacteria 1135
284 Ga0501072_0406132 3300049588 Bacteria 1080
285 Ga0501073_0022334 3300049589 Bacteria 4558
286 Ga0501073_0087076 3300049589 Bacteria 2172
287 Ga0501074_0232659 3300049590 Bacteria 1312
288 Ga0501077_0095921 3300049593 Bacteria 1880
289 Ga0501080_0006547 3300049742 Bacteria 10469
290 Ga0501080_0015765 3300049742 Bacteria 6970
291 Ga0501080_0448041 3300049742 Bacteria 1157
292 Ga0501080_0481326 3300049742 Bacteria 1110
293 Ga0501083_0001964 3300049744 Bacteria 14124
294 Ga0501083_0048768 3300049744 Bacteria 2857
295 Ga0501083_0219052 3300049744 Bacteria 1240
296 Ga0501035_0123716 3300049822 Bacteria 2259
297 Ga0501035_0232837 3300049822 Bacteria 1569
298 Ga0501044_0010282 3300049823 Bacteria 10163
299 Ga0501044_0013715 3300049823 Bacteria 8759
300 Ga0501044_0066609 3300049823 Bacteria 3671
301 Ga0501044_0106948 3300049823 Bacteria 2809
302 Ga0501044_0386869 3300049823 Bacteria 1313
303 nmdc:mga0n895_11499_c1 3300050512 Bacteria 7900
304 nmdc:mga0n895_545550_c1 3300050512 Bacteria 1165
305 nmdc:mga0n895_76517_c1 3300050512 Unclassified 3328
306 nmdc:mga0rr50_206573_c1 3300050513 Unclassified 1616
307 nmdc:mga0rr50_47048_c1 3300050513 Bacteria 3179
308 Ga0495595_0081191 3300053084 Bacteria 1545
309 Ga0495619_0173128 3300053085 Bacteria 1493
310 Ga0495619_0382050 3300053085 Bacteria 973
311 Ga0501084_0050979 3300054114 Bacteria 3463
312 Ga0501084_0150231 3300054114 Bacteria 1963
313 Ga0501082_0042807 3300060353 Bacteria 3903
314 Ga0530510_0608694 3300061734 Bacteria 831
315 Ga0163162_10663629
316 JGI25406J46586_10000003
317 JGI25405J52794_10001961
318 Ga0065704_10159025
319 Ga0065712_10082560
320 Ga0065712_10156508
321 Ga0065712_10228406
322 Ga0065715_10099189
323 Ga0065715_10274404
324 Ga0070675_100006460
325 Ga0070671_100017257
326 Ga0070674_100004233
327 Ga0070673_100035054
328 Ga0070703_10042215
329 Ga0070709_10188743
330 Ga0070713_100010464
331 Ga0070711_100014498
332 Ga0070711_100026906
333 Ga0070705_100008408
334 Ga0070705_100056818
335 Ga0070694_100003186
336 Ga0070708_100002212
337 Ga0070708_100014545
338 Ga0070708_100043418
339 Ga0070708_100051045
340 Ga0070708_100077078
341 Ga0070708_100089292
342 Ga0070708_100153639
343 Ga0070708_100274238
344 Ga0070706_100000703
345 Ga0070706_100001123
346 Ga0070706_100018800
347 Ga0070706_100044979
348 Ga0070706_100046036
349 Ga0070706_100049163
350 Ga0070706_100068322
351 Ga0070706_100131744
352 Ga0070706_100201150
353 Ga0070706_100223261
354 Ga0070706_100310657
355 Ga0070706_100442062
356 Ga0070707_100000632
357 Ga0070707_100023505
358 Ga0070707_100059764
359 Ga0070707_100100857
360 Ga0070707_100108122
361 Ga0070707_100134357
362 Ga0070707_100154716
363 Ga0070707_100383988
364 Ga0070707_100390662
365 Ga0070698_100002192
366 Ga0070698_100010580
367 Ga0070698_100037523
368 Ga0070698_100063332
369 Ga0070699_100007799
370 Ga0070699_100013075
371 Ga0070699_100020916
372 Ga0070699_100118162
373 Ga0070699_100164101
374 Ga0070699_100409207
375 Ga0070699_100566288
376 Ga0070679_100059668
377 Ga0070697_100001049
378 Ga0070697_100001245
379 Ga0070697_100012735
380 Ga0070697_100024909
381 Ga0070697_100029524
382 Ga0070697_100062613
383 Ga0070697_100071054
384 Ga0070697_100078124
385 Ga0070697_100180316
386 Ga0070697_100310372
387 Ga0070697_100520775
388 Ga0070672_100190503
389 Ga0070695_100001047
390 Ga0070696_100003362
391 Ga0070696_100367566
392 Ga0070693_100000147
393 Ga0070665_100000881
394 Ga0070665_100277550
395 Ga0070704_100003957
396 Ga0068852_100497875
397 Ga0068859_100031306
398 Ga0068859_100704759
399 Ga0068863_100038279
400 Ga0068858_100053108
401 Ga0068860_100294371
402 Ga0081455_10001323
403 Ga0081455_10009017
404 Ga0081455_10011524
405 Ga0081455_10085911
406 Ga0081455_10204831
407 Ga0081540_1000196
408 Ga0081540_1007057
409 Ga0081539_10000077
410 Ga0070717_10000625
411 Ga0070717_10012563
412 Ga0070717_10039698
413 Ga0070717_10202675
414 Ga0070716_100131005
415 Ga0070712_100012145
416 Ga0070712_100038684
417 Ga0070712_100255224
418 Ga0097621_100008998
419 Ga0068871_100024966
420 Ga0075434_100127114
421 Ga0075436_100024953
422 Ga0075436_100056645
423 Ga0097620_100031306
424 Ga0097620_100704797
425 Ga0075435_100123314
426 Ga0075435_100242313
427 Ga0099794_10010985
428 Ga0099794_10016271
429 Ga0105247_10317531
430 Ga0114129_10022815
431 Ga0105248_10292171
432 Ga0105249_10153409
433 Ga0157374_10000649
434 Ga0157374_10003199
435 Ga0157378_10044205
436 Ga0157378_10047758
437 Ga0157378_10057430
438 Ga0157378_10071353
439 Ga0157378_10643733
440 Ga0157378_10649261
441 Ga0163162_10000794
442 Ga0157375_10001078
443 Ga0157375_10002725
444 Ga0157375_10343830
445 Ga0157375_10344798
446 Ga0157376_10001758
447 Ga0207697_10000321
448 Ga0207697_10009446
449 Ga0207692_10234026
450 Ga0207688_10008107
451 Ga0207680_10054561
452 Ga0207680_10153763
453 Ga0207699_10161604
454 Ga0207684_10000411
455 Ga0207684_10008777
456 Ga0207684_10036311
457 Ga0207684_10045449
458 Ga0207684_10091345
459 Ga0207684_10098535
460 Ga0207684_10124978
461 Ga0207684_10197119
462 Ga0207684_10272125
463 Ga0207684_10442264
464 Ga0207693_10071050
465 Ga0207663_10106513
466 Ga0207649_10180324
467 Ga0207646_10003048
468 Ga0207646_10003509
469 Ga0207646_10021605
470 Ga0207646_10101683
471 Ga0207646_10108661
472 Ga0207646_10145641
473 Ga0207646_10317185
474 Ga0207681_10338917
475 Ga0207650_10002120
476 Ga0207650_10091498
477 Ga0207659_10127104
478 Ga0207700_10016979
479 Ga0207644_10005502
480 Ga0207644_10037290
481 Ga0207686_10028529
482 Ga0207669_10286808
483 Ga0207665_10035170
484 Ga0207665_10069057
485 Ga0207665_10317770
486 Ga0207665_10319744
487 Ga0207691_10000830
488 Ga0207691_10456761
489 Ga0207711_10685246
490 Ga0207661_10274953
491 Ga0207651_10055196
492 Ga0207703_10118011
493 Ga0207703_10232453
494 Ga0207641_10031502
495 Ga0207683_10001502
496 Ga0209588_1002607
497 Ga0209588_1002905
498 Ga0268266_10000438
499 Ga0268266_10122474
500 Ga0268266_10551343
501 Ga0268265_10091255
502 Ga0268264_10173446
503 Ga0265760_10006631
504 Ga0373957_0130832
505 Ga0373947_0213727
506 Ga0373937_0006760
507 Ga0373937_0977915
508 Ga0373925_0143118
509 Ga0395900_0001895
510 Ga0395900_0562609
511 Ga0395898_0003099
512 Ga0395905_0017074
513 Ga0395901_0000371
514 Ga0395901_0487289
515 Ga0439451_036372
516 Ga0451577_0005191
517 Ga0495592_0035652
518 Ga0495629_0119841
519 Ga0495641_0033659
520 Ga0495651_0026532
521 Ga0495580_0006952
522 Ga0495580_0066355
523 Ga0495582_0000093
524 Ga0495582_0001344
525 Ga0495639_0013200
526 Ga0495664_0239708
527 Ga0495594_0022214
528 Ga0495618_0034497
529 Ga0495628_0040613
530 Ga0495630_0091974
531 Ga0495666_0016863
532 Ga0495666_0117658
533 Ga0495652_0045774
534 Ga0495640_0021789
535 Ga0495586_0090209
536 Ga0495645_0015142
537 Ga0495634_0055912
538 Ga0495635_0183623
539 Ga0495599_0136549
540 Ga0495647_0003880
541 Ga0495647_0147061
542 Ga0495658_0219236
543 Ga0495658_0414244
544 Ga0495613_0055910
545 Ga0495624_0021400
546 Ga0495600_0412330
547 Ga0495674_0031969
548 Ga0495674_0077233
549 Ga0495676_0021115
550 Ga0495680_0083620
551 Ga0495675_0011467
552 Ga0495684_0004895
553 Ga0495684_0348699
554 Ga0495602_0151918
555 Ga0496101_0118466
556 Ga0496108_0037585
557 Ga0496109_0143916
558 Ga0496112_0110818
559 Ga0496114_0072899
560 Ga0496115_0032378
561 Ga0501031_0111750
562 Ga0501032_0002560
563 Ga0501032_0029232
564 Ga0501033_0056444
565 Ga0501034_0024806
566 Ga0501034_0152922
567 Ga0501034_0227068
568 Ga0501034_0384714
569 Ga0501036_0025211
570 Ga0501036_0174271
571 Ga0501036_0442180
572 Ga0501037_0057530
573 Ga0501038_0015486
574 Ga0501038_0086087
575 Ga0501039_0001928
576 Ga0501043_0005957
577 Ga0501043_0014161
578 Ga0501043_0094417
579 Ga0501043_0368557
580 Ga0501046_0016307
581 Ga0501046_0065857
582 Ga0501046_0105647
583 Ga0501047_0000303
584 Ga0501047_0025757
585 Ga0501047_0029274
586 Ga0501047_0149688
587 Ga0501047_0214604
588 Ga0501048_0094600
589 Ga0501048_0189306
590 Ga0501048_0258773
591 Ga0501048_0273154
592 Ga0501067_0155937
593 Ga0501068_0212564
594 Ga0501069_0015168
595 Ga0501069_0023465
596 Ga0501070_0100870
597 Ga0501070_0385455
598 Ga0501072_0406132
599 Ga0501073_0022334
600 Ga0501073_0087076
601 Ga0501074_0232659
602 Ga0501077_0095921
603 Ga0501080_0006547
604 Ga0501080_0015765
605 Ga0501080_0448041
606 Ga0501080_0481326
607 Ga0501083_0001964
608 Ga0501083_0048768
609 Ga0501083_0219052
610 Ga0501035_0123716
611 Ga0501035_0232837
612 Ga0501044_0010282
613 Ga0501044_0013715
614 Ga0501044_0066609
615 Ga0501044_0106948
616 Ga0501044_0386869
617 nmdc:mga0n895_11499_c1
618 nmdc:mga0n895_545550_c1
619 nmdc:mga0n895_76517_c1
620 nmdc:mga0rr50_206573_c1
621 nmdc:mga0rr50_47048_c1
622 Ga0495595_0081191
623 Ga0495619_0173128
624 Ga0495619_0382050
625 Ga0501084_0050979
626 Ga0501084_0150231
627 Ga0501082_0042807
628 Ga0530510_0608694

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01416

PseudoU_synth_1

tRNA pseudouridine synthase

167

282

0.95

PF01416

PseudoU_synth_1

tRNA pseudouridine synthase

29

127

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nr0-assembly1.cif.gz_B crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.9445 1 247
2nr0-assembly1.cif.gz_B crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.9335 1 247
2nre-assembly1.cif.gz_A-2 crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.9207 1 247
8q70-assembly1.cif.gz_A-2 trna pseudouridine synthase a homodimer 0.9013 4 247
1vs3-assembly1.cif.gz_B crystal structure of the trna pseudouridine synthase trua from thermus thermophilus hb8 0.8945 3 247
ID Description Score Start End Superfamily
af_Q2FW37_1_104_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9698 4 104 3.30.70.580
af_A0A0R0F7R0_40_148_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9664 3 107 3.30.70.580
af_C7J2E5_59_129_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9634 4 65 3.30.70.580
af_Q2QWH9_69_188_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9628 1 107 3.30.70.580
2nqpB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9618 1 107 3.30.70.580
ID Description Score Start End GO Terms
AF-A0A7U0TSF6-F1-model_v4 deleted 0.9914 4 124
AF-A0A533YIS0-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.988 3 110 GO:0003723
GO:0031119
GO:0160147
AF-A0A533X8U9-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9839 3 160 GO:0003723
GO:0031119
GO:0160147
AF-A0A2M7BF65-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9819 4 86 GO:0003723
GO:0031119
GO:0160147
AF-X1RMX3-F1-model_v4 Pseudouridine synthase I TruA alpha/beta domain-containing protein 0.9805 1 107 GO:0003723
GO:0009982
GO:0031119

Map