F402653

General Info

Members Datasets Scaffolds Average Seq Length
314 225 628 240

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10114456|Ga0111539_101144563
Length 275
Sequence MNAMIQVRDLRKTYQMGDIEVPALRGVNFSIQRGEFVAIMGPSGSGKSTLMNLLGCLDTPTAGQYLLDGLPVDQLDRNLLAAVRNRKIGFVFQQFNLLPRQTAQENVALPLVYLGGVSTAERLERAKQVLEQVGLGDRLHHRPRELSGGQQQRVAIARALITQPALLLADEPTGNLDSRASIEIMALFEELNRQGITIVVVTHEPDIATHAGRVLAVRDGLLDSDTAARPQPLNGNPTSIWQRPTNGHAAPTGPGQRRRISIARRPPLAAKRRNV

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
51 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
52 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
59 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
60 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
83 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
84 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
123 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
124 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
125 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
126 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
127 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
128 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
129 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
130 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
131 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
132 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
133 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
134 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
135 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
136 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
137 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
138 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
139 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
140 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
141 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
142 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
143 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
144 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
145 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
146 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
147 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
148 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
149 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
150 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
151 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
152 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
153 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
154 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
155 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
156 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
157 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
158 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
159 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
160 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
161 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
162 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
163 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
164 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
165 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
166 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
167 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
168 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
169 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
170 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
171 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
184 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
185 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
186 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
187 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
188 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
189 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
190 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
191 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
192 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
193 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
194 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
195 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
198 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
199 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
200 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
201 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
202 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
203 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
204 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
205 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
206 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
207 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
208 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
209 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
210 2508501050 Microvirga lupini Lut6 Isolate Nodule
211 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
212 2643221733 Bosea sp. Root381 Isolate Unclassified
213 2643221736 Bosea sp. Root483D1 Isolate Unclassified
214 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
215 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
216 2841760612 Bosea sp. Tri-49 Isolate Nodule
217 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
218 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
219 2844104063 Bosea sp. Tri-39 Isolate Nodule
220 2851182111 Bosea sp. Tri-44 Isolate Nodule
221 2851246043 Bosea sp. Tri-54 Isolate Nodule
222 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
223 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
224 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
225 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.9
Metatranscriptomes 0
Isolates 5.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.46
Nodule 3.5
Rhizoplane 0.96
Rhizosphere 89.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10114456 3300009094 Bacteria 3163
2 CNXas_1000022 3300000545 Bacteria 32122
3 Ga0055526_1000470 3300003771 Bacteria 32053
4 Ga0070676_10423085 3300005328 Bacteria 931
5 Ga0070690_100000242 3300005330 Bacteria 28065
6 Ga0070690_100011214 3300005330 Bacteria 5238
7 Ga0070670_100062417 3300005331 Bacteria 3199
8 Ga0068869_100000383 3300005334 Bacteria 24002
9 Ga0068869_100016321 3300005334 Bacteria 5003
10 Ga0068869_100023621 3300005334 Bacteria 4250
11 Ga0070666_10005051 3300005335 Bacteria 8071
12 Ga0070666_10115835 3300005335 Bacteria 1856
13 Ga0070680_100002710 3300005336 Bacteria 13138
14 Ga0070680_100479814 3300005336 Bacteria 1063
15 Ga0070682_100167405 3300005337 Bacteria 1524
16 Ga0068868_100043086 3300005338 Bacteria 3525
17 Ga0068868_100105625 3300005338 Bacteria 2284
18 Ga0070689_100035034 3300005340 Bacteria 3833
19 Ga0070689_100036173 3300005340 Bacteria 3776
20 Ga0070687_100000352 3300005343 Bacteria 15634
21 Ga0070687_100307460 3300005343 Bacteria 1008
22 Ga0070661_100045108 3300005344 Bacteria 3222
23 Ga0070692_10048731 3300005345 Bacteria 2196
24 Ga0070673_100027563 3300005364 Bacteria 4213
25 Ga0070673_100074892 3300005364 Bacteria 2729
26 Ga0070688_100163440 3300005365 Bacteria 1531
27 Ga0070667_100045412 3300005367 Bacteria 3693
28 Ga0070667_100515434 3300005367 Bacteria 1097
29 Ga0070703_10009818 3300005406 Bacteria 2698
30 Ga0070701_10006431 3300005438 Bacteria 4943
31 Ga0070705_100000984 3300005440 Bacteria 15928
32 Ga0070700_100001627 3300005441 Bacteria 11230
33 Ga0070694_100001000 3300005444 Bacteria 16049
34 Ga0070694_100175400 3300005444 Bacteria 1582
35 Ga0070694_100246495 3300005444 Bacteria 1350
36 Ga0070678_100006803 3300005456 Bacteria 6740
37 Ga0068867_100002032 3300005459 Bacteria 14147
38 Ga0068867_100098599 3300005459 Bacteria 2228
39 Ga0070707_100212135 3300005468 Bacteria 1887
40 Ga0070679_100072419 3300005530 Bacteria 3438
41 Ga0070672_100248683 3300005543 Bacteria 1497
42 Ga0070686_100000440 3300005544 Bacteria 25874
43 Ga0070686_100006485 3300005544 Bacteria 6509
44 Ga0070695_100000257 3300005545 Bacteria 26657
45 Ga0070695_100004526 3300005545 Bacteria 8159
46 Ga0070695_100083737 3300005545 Bacteria 2114
47 Ga0070695_100093042 3300005545 Bacteria 2017
48 Ga0070695_100155582 3300005545 Bacteria 1599
49 Ga0070696_100000717 3300005546 Bacteria 21181
50 Ga0070696_100001905 3300005546 Bacteria 13727
51 Ga0070693_100000458 3300005547 Bacteria 18306
52 Ga0070704_100000205 3300005549 Bacteria 24552
53 Ga0068855_100002240 3300005563 Bacteria 23909
54 Ga0068854_100007086 3300005578 Bacteria 7157
55 Ga0068856_100083099 3300005614 Bacteria 3179
56 Ga0070702_100006142 3300005615 Bacteria 5662
57 Ga0070702_100189848 3300005615 Bacteria 1351
58 Ga0068852_100556429 3300005616 Bacteria 1148
59 Ga0068859_100001225 3300005617 Bacteria 26177
60 Ga0068866_10135296 3300005718 Bacteria 1407
61 Ga0068861_100000491 3300005719 Bacteria 22991
62 Ga0068861_100507791 3300005719 Bacteria 1091
63 Ga0068870_10092593 3300005840 Bacteria 1693
64 Ga0068863_100014704 3300005841 Bacteria 7531
65 Ga0068863_100507029 3300005841 Bacteria 1188
66 Ga0068858_100004231 3300005842 Bacteria 14130
67 Ga0068858_100027787 3300005842 Bacteria 5256
68 Ga0068858_100076957 3300005842 Bacteria 3099
69 Ga0068860_100001267 3300005843 Bacteria 27601
70 Ga0068860_100227499 3300005843 Bacteria 1812
71 Ga0068862_100029478 3300005844 Bacteria 4624
72 Ga0075365_10085920 3300006038 Bacteria 2137
73 Ga0075368_10043931 3300006042 Bacteria 1762
74 Ga0075364_10036054 3300006051 Bacteria 3197
75 Ga0070715_10016118 3300006163 Bacteria 2801
76 Ga0070712_100036778 3300006175 Bacteria 3333
77 Ga0075362_10044321 3300006177 Bacteria 1972
78 Ga0075367_10063055 3300006178 Bacteria 2215
79 Ga0075369_10044493 3300006186 Bacteria 1907
80 Ga0075366_10076772 3300006195 Bacteria 1994
81 Ga0097621_100029920 3300006237 Bacteria 4305
82 Ga0068871_100001420 3300006358 Bacteria 16039
83 Ga0075428_100152763 3300006844 Bacteria 2508
84 Ga0075428_100896298 3300006844 Bacteria 941
85 Ga0075431_100057716 3300006847 Bacteria 4004
86 Ga0075431_100159606 3300006847 Bacteria 2319
87 Ga0075431_100379912 3300006847 Bacteria 1417
88 Ga0075429_100002502 3300006880 Bacteria 15457
89 Ga0068865_100029087 3300006881 Bacteria 3662
90 Ga0097620_100001225 3300006931 Bacteria 26177
91 Ga0105245_10001829 3300009098 Bacteria 19360
92 Ga0105245_10125848 3300009098 Bacteria 2399
93 Ga0114129_10009250 3300009147 Bacteria 14051
94 Ga0114129_10075309 3300009147 Bacteria 4699
95 Ga0114129_10592365 3300009147 Bacteria 1437
96 Ga0105243_10011167 3300009148 Bacteria 6793
97 Ga0105241_10111652 3300009174 Bacteria 2189
98 Ga0105242_10003637 3300009176 Bacteria 12004
99 Ga0105242_10024821 3300009176 Bacteria 4737
100 Ga0105248_10258981 3300009177 Bacteria 1958
101 Ga0105248_11000639 3300009177 Bacteria 944
102 Ga0105249_10000177 3300009553 Bacteria 74897
103 Ga0105249_10000348 3300009553 Bacteria 46377
104 Ga0105239_10741682 3300010375 Bacteria 1124
105 Ga0105246_10722573 3300011119 Bacteria 875
106 Ga0157371_10054955 3300013102 Bacteria 2826
107 Ga0171462_1006 3300013250 Bacteria 432986
108 Ga0157374_10021025 3300013296 Bacteria 5799
109 Ga0157378_10013862 3300013297 Bacteria 7051
110 Ga0157378_10059637 3300013297 Bacteria 3405
111 Ga0157378_10595433 3300013297 Bacteria 1116
112 Ga0157378_10725414 3300013297 Bacteria 1015
113 Ga0157375_10047039 3300013308 Bacteria 4210
114 Ga0157375_10617035 3300013308 Bacteria 1243
115 Ga0163163_10006679 3300014325 Bacteria 10107
116 Ga0157380_10044892 3300014326 Bacteria 3466
117 Ga0157380_10480520 3300014326 Bacteria 1201
118 Ga0157377_10292127 3300014745 Bacteria 1072
119 Ga0157377_10353350 3300014745 Bacteria 987
120 Ga0157379_10139774 3300014968 Bacteria 2183
121 Ga0157379_10415641 3300014968 Bacteria 1238
122 Ga0157376_10005398 3300014969 Bacteria 8938
123 Ga0157376_10141697 3300014969 Bacteria 2157
124 Ga0182005_1059482 3300015265 Bacteria 1043
125 Ga0163161_10011438 3300017792 Bacteria 6156
126 Ga0209564_1000065 3300025295 Bacteria 315205
127 Ga0207642_10000956 3300025899 Bacteria 9028
128 Ga0207642_10028316 3300025899 Bacteria 2305
129 Ga0207645_10279051 3300025907 Bacteria 1109
130 Ga0207654_10038138 3300025911 Bacteria 2694
131 Ga0207671_10086920 3300025914 Bacteria 2351
132 Ga0207660_10034627 3300025917 Bacteria 3501
133 Ga0207662_10000223 3300025918 Bacteria 26281
134 Ga0207649_10038084 3300025920 Bacteria 2910
135 Ga0207652_10023573 3300025921 Bacteria 5099
136 Ga0207687_10004738 3300025927 Bacteria 9053
137 Ga0207644_10237673 3300025931 Bacteria 1449
138 Ga0207706_10002983 3300025933 Bacteria 16328
139 Ga0207686_10000347 3300025934 Bacteria 33269
140 Ga0207686_10012448 3300025934 Bacteria 4679
141 Ga0207709_10006525 3300025935 Bacteria 6552
142 Ga0207670_10018604 3300025936 Bacteria 4228
143 Ga0207670_10030630 3300025936 Bacteria 3438
144 Ga0207704_10031289 3300025938 Bacteria 2996
145 Ga0207691_10418695 3300025940 Bacteria 1142
146 Ga0207689_10000913 3300025942 Bacteria 28320
147 Ga0207689_10004114 3300025942 Bacteria 13232
148 Ga0207661_10534197 3300025944 Bacteria 1073
149 Ga0207667_10032282 3300025949 Bacteria 5644
150 Ga0207712_10003645 3300025961 Bacteria 9701
151 Ga0207712_10582080 3300025961 Bacteria 966
152 Ga0207668_10424615 3300025972 Bacteria 1129
153 Ga0207640_10052089 3300025981 Bacteria 2664
154 Ga0207658_10038125 3300025986 Bacteria 3460
155 Ga0207658_10103733 3300025986 Bacteria 2233
156 Ga0207677_10023238 3300026023 Bacteria 3825
157 Ga0207703_10005249 3300026035 Bacteria 10446
158 Ga0207703_10213592 3300026035 Bacteria 1721
159 Ga0207639_10194022 3300026041 Bacteria 1737
160 Ga0207708_10001045 3300026075 Bacteria 20717
161 Ga0207702_10027857 3300026078 Bacteria 4694
162 Ga0207641_10012066 3300026088 Bacteria 7086
163 Ga0207641_10319288 3300026088 Bacteria 1472
164 Ga0207648_10001327 3300026089 Bacteria 27511
165 Ga0207675_100004252 3300026118 Bacteria 13850
166 Ga0207675_100164192 3300026118 Bacteria 2120
167 Ga0207683_10028036 3300026121 Bacteria 4868
168 Ga0209967_1007666 3300027364 Bacteria 1479
169 Ga0209966_1003720 3300027695 Bacteria 2576
170 Ga0207428_10000688 3300027907 Bacteria 39292
171 Ga0268265_10049280 3300028380 Bacteria 3166
172 Ga0268264_10004138 3300028381 Bacteria 12410
173 Ga0268264_10203707 3300028381 Bacteria 1812
174 Ga0307515_10202752 3300028794 Bacteria 1854
175 Ga0265331_10156810 3300031250 Bacteria 1033
176 Ga0307408_100266471 3300031548 Bacteria 1420
177 Ga0307405_10216115 3300031731 Bacteria 1403
178 Ga0307413_10033378 3300031824 Bacteria 2930
179 Ga0307410_10045761 3300031852 Bacteria 2916
180 Ga0307410_10170739 3300031852 Bacteria 1638
181 Ga0307414_10283064 3300032004 Bacteria 1394
182 Ga0307411_10245642 3300032005 Bacteria 1404
183 Ga0373930_0004323 3300034816 Bacteria 2305
184 Ga0373950_0003095 3300034818 Bacteria 2350
185 Ga0373959_0047862 3300034820 Bacteria 915
186 Ga0373938_0000953 3300034957 Bacteria 4643
187 Ga0373926_0006392 3300035083 Bacteria 3915
188 Ga0373929_0003773 3300035085 Bacteria 2716
189 Ga0373949_0003043 3300035090 Bacteria 4109
190 Ga0373932_0003588 3300035112 Bacteria 3712
191 Ga0373936_0002438 3300035113 Bacteria 6963
192 Ga0373941_0000999 3300035115 Bacteria 5882
193 Ga0373943_0001751 3300035170 Bacteria 9839
194 Ga0373946_0006143 3300035171 Bacteria 4350
195 Ga0373942_0002763 3300035207 Bacteria 4189
196 Ga0373962_0002518 3300035242 Bacteria 4348
197 Ga0373931_0000108 3300035691 Bacteria 37813
198 Ga0373931_0205220 3300035691 Bacteria 1179
199 Ga0373935_0059015 3300035692 Bacteria 2451
200 Ga0373927_0020003 3300035695 Bacteria 4390
201 Ga0373947_0077118 3300035725 Bacteria 2055
202 Ga0373947_0139562 3300035725 Bacteria 1553
203 Ga0373925_0005007 3300037068 Bacteria 9944
204 Ga0400489_61686 3300039093 Bacteria 16221
205 Ga0450923_031276 3300042125 Bacteria 1086
206 Ga0466972_0007679 3300044658 Bacteria 5415
207 Ga0466968_0003813 3300044735 Bacteria 5590
208 Ga0466960_0055929 3300044901 Bacteria 1919
209 Ga0451576_0037247 3300045051 Bacteria 5152
210 Ga0451576_0568491 3300045051 Bacteria 1191
211 Ga0495603_0007718 3300046455 Bacteria 6482
212 Ga0495580_0007563 3300046472 Bacteria 8713
213 Ga0495639_0050155 3300046475 Bacteria 1895
214 Ga0495594_0043773 3300046499 Bacteria 2454
215 Ga0495586_0018741 3300046535 Bacteria 3684
216 Ga0495598_0041266 3300046537 Bacteria 1349
217 Ga0495656_0016503 3300046615 Bacteria 2803
218 Ga0495659_0036427 3300046664 Bacteria 1738
219 Ga0495647_0000131 3300046681 Bacteria 19061
220 Ga0495658_0014400 3300046683 Bacteria 4042
221 Ga0495672_0131632 3300047320 Bacteria 1315
222 Ga0495680_0109865 3300047322 Bacteria 2044
223 Ga0496106_0387865 3300048909 Bacteria 1122
224 Ga0496108_0000011 3300048911 Bacteria 263294
225 Ga0496114_0178909 3300048917 Bacteria 1851
226 Ga0496122_0129755 3300048925 Bacteria 1605
227 Ga0501031_0046967 3300049568 Bacteria 2815
228 Ga0501032_0078877 3300049569 Bacteria 2192
229 Ga0501033_0027455 3300049570 Bacteria 4279
230 Ga0501033_0146603 3300049570 Bacteria 1704
231 Ga0501034_0177065 3300049571 Bacteria 2098
232 Ga0501036_0007126 3300049572 Bacteria 9101
233 Ga0501036_0161036 3300049572 Bacteria 1892
234 Ga0501038_0002619 3300049574 Bacteria 16824
235 Ga0501039_0022384 3300049575 Bacteria 4851
236 Ga0501040_0000846 3300049576 Bacteria 19189
237 Ga0501040_0021215 3300049576 Bacteria 4335
238 Ga0501041_0002579 3300049577 Bacteria 10336
239 Ga0501041_0030733 3300049577 Bacteria 3242
240 Ga0501042_0001037 3300049578 Bacteria 15853
241 Ga0501042_0032915 3300049578 Bacteria 3673
242 Ga0501042_0086451 3300049578 Bacteria 2249
243 Ga0501046_0001577 3300049580 Bacteria 21793
244 Ga0501048_0020407 3300049582 Bacteria 4856
245 Ga0501068_0005360 3300049584 Bacteria 7010
246 Ga0501070_0065571 3300049586 Bacteria 3007
247 Ga0501071_0000428 3300049587 Bacteria 21030
248 Ga0501071_0008023 3300049587 Bacteria 6965
249 Ga0501071_0064969 3300049587 Bacteria 2649
250 Ga0501072_0000896 3300049588 Bacteria 21852
251 Ga0501072_0005389 3300049588 Bacteria 9738
252 Ga0501072_0046040 3300049588 Bacteria 3432
253 Ga0501074_0005368 3300049590 Bacteria 9220
254 Ga0501074_0054763 3300049590 Bacteria 2876
255 Ga0501075_0001354 3300049591 Bacteria 15928
256 Ga0501075_0209884 3300049591 Bacteria 1485
257 Ga0501076_0001866 3300049592 Bacteria 14361
258 Ga0501076_0003155 3300049592 Bacteria 11495
259 Ga0501076_0257925 3300049592 Bacteria 1427
260 Ga0501076_0703361 3300049592 Bacteria 834
261 Ga0501077_0000758 3300049593 Bacteria 19509
262 Ga0501077_0078477 3300049593 Bacteria 2092
263 Ga0501249_085804 3300049679 Bacteria 743
264 Ga0501079_0035235 3300049741 Bacteria 3852
265 Ga0501079_0131651 3300049741 Bacteria 1946
266 Ga0501080_0008023 3300049742 Bacteria 9566
267 Ga0501081_0055946 3300049743 Bacteria 2725
268 Ga0501081_0079805 3300049743 Bacteria 2289
269 Ga0501035_0003301 3300049822 Bacteria 15464
270 Ga0501044_0911745 3300049823 Bacteria 753
271 Ga0501045_0001196 3300049824 Bacteria 17269
272 Ga0501045_0020703 3300049824 Bacteria 4700
273 nmdc:mga03683_81950_c1 3300050489 Bacteria 1394
274 nmdc:mga07m45_47654_c1 3300050496 Bacteria 2409
275 nmdc:mga05p37_200_c1 3300050507 Bacteria 59779
276 nmdc:mga05p37_264405_c1 3300050507 Bacteria 2057
277 nmdc:mga05p37_58329_c1 3300050507 Bacteria 4754
278 nmdc:mga05p37_665302_c1 3300050507 Bacteria 1163
279 nmdc:mga09592_10_c1 3300050508 Bacteria 106937
280 nmdc:mga09592_178565_c1 3300050508 Bacteria 1836
281 nmdc:mga0qj67_16229_c1 3300050509 Bacteria 5645
282 nmdc:mga0qj67_1788_c1 3300050509 Bacteria 15213
283 nmdc:mga0qj67_229598_c1 3300050509 Bacteria 1506
284 nmdc:mga06r32_181334_c1 3300050510 Bacteria 2091
285 nmdc:mga06r32_207171_c1 3300050510 Bacteria 1949
286 nmdc:mga06r32_229587_c1 3300050510 Bacteria 1844
287 nmdc:mga06r32_23336_c1 3300050510 Bacteria 5722
288 nmdc:mga06r32_627016_c1 3300050510 Bacteria 1045
289 nmdc:mga08y16_2521_c1 3300050511 Bacteria 18816
290 Ga0500616_0016598 3300053153 Bacteria 4188
291 Ga0500616_0020550 3300053153 Bacteria 3707
292 Ga0500622_0026181 3300053156 Bacteria 3080
293 Ga0501084_0014860 3300054114 Bacteria 6455
294 Ga0501084_0074218 3300054114 Bacteria 2848
295 Ga0501082_0000187 3300060353 Bacteria 53600
296 Ga0501082_0010085 3300060353 Bacteria 8140
297 Ga0530510_0000384 3300061734 Bacteria 28758
298 Ga0530510_0000779 3300061734 Bacteria 20734
299 2508729311 2508501050 Bacteria 9633614
300 2509077873 2508501114 Bacteria 7082538
301 2644732255 2643221733 Bacteria 5690728
302 2644745351 2643221736 Bacteria 6608466
303 2776258736 2775506901 Bacteria 9631051
304 2835312937 2835312727 Bacteria 7413381
305 2841760862 2841760612 Bacteria 6454112
306 2841912859 2841911363 Bacteria 6173697
307 2841918606 2841917233 Bacteria 6173500
308 2844106519 2844104063 Bacteria 6440972
309 2851187510 2851182111 Bacteria 6047226
310 2851246875 2851246043 Bacteria 6439203
311 2884300845 2884298095 Bacteria 3823049
312 2894242430 2894232714 Bacteria 8834183
313 2917704732 2917699015 Bacteria 7043791
314 8057530922 8057529695 Bacteria 6306553
315 Ga0111539_10114456
316 CNXas_1000022
317 Ga0055526_1000470
318 Ga0070676_10423085
319 Ga0070690_100000242
320 Ga0070690_100011214
321 Ga0070670_100062417
322 Ga0068869_100000383
323 Ga0068869_100016321
324 Ga0068869_100023621
325 Ga0070666_10005051
326 Ga0070666_10115835
327 Ga0070680_100002710
328 Ga0070680_100479814
329 Ga0070682_100167405
330 Ga0068868_100043086
331 Ga0068868_100105625
332 Ga0070689_100035034
333 Ga0070689_100036173
334 Ga0070687_100000352
335 Ga0070687_100307460
336 Ga0070661_100045108
337 Ga0070692_10048731
338 Ga0070673_100027563
339 Ga0070673_100074892
340 Ga0070688_100163440
341 Ga0070667_100045412
342 Ga0070667_100515434
343 Ga0070703_10009818
344 Ga0070701_10006431
345 Ga0070705_100000984
346 Ga0070700_100001627
347 Ga0070694_100001000
348 Ga0070694_100175400
349 Ga0070694_100246495
350 Ga0070678_100006803
351 Ga0068867_100002032
352 Ga0068867_100098599
353 Ga0070707_100212135
354 Ga0070679_100072419
355 Ga0070672_100248683
356 Ga0070686_100000440
357 Ga0070686_100006485
358 Ga0070695_100000257
359 Ga0070695_100004526
360 Ga0070695_100083737
361 Ga0070695_100093042
362 Ga0070695_100155582
363 Ga0070696_100000717
364 Ga0070696_100001905
365 Ga0070693_100000458
366 Ga0070704_100000205
367 Ga0068855_100002240
368 Ga0068854_100007086
369 Ga0068856_100083099
370 Ga0070702_100006142
371 Ga0070702_100189848
372 Ga0068852_100556429
373 Ga0068859_100001225
374 Ga0068866_10135296
375 Ga0068861_100000491
376 Ga0068861_100507791
377 Ga0068870_10092593
378 Ga0068863_100014704
379 Ga0068863_100507029
380 Ga0068858_100004231
381 Ga0068858_100027787
382 Ga0068858_100076957
383 Ga0068860_100001267
384 Ga0068860_100227499
385 Ga0068862_100029478
386 Ga0075365_10085920
387 Ga0075368_10043931
388 Ga0075364_10036054
389 Ga0070715_10016118
390 Ga0070712_100036778
391 Ga0075362_10044321
392 Ga0075367_10063055
393 Ga0075369_10044493
394 Ga0075366_10076772
395 Ga0097621_100029920
396 Ga0068871_100001420
397 Ga0075428_100152763
398 Ga0075428_100896298
399 Ga0075431_100057716
400 Ga0075431_100159606
401 Ga0075431_100379912
402 Ga0075429_100002502
403 Ga0068865_100029087
404 Ga0097620_100001225
405 Ga0105245_10001829
406 Ga0105245_10125848
407 Ga0114129_10009250
408 Ga0114129_10075309
409 Ga0114129_10592365
410 Ga0105243_10011167
411 Ga0105241_10111652
412 Ga0105242_10003637
413 Ga0105242_10024821
414 Ga0105248_10258981
415 Ga0105248_11000639
416 Ga0105249_10000177
417 Ga0105249_10000348
418 Ga0105239_10741682
419 Ga0105246_10722573
420 Ga0157371_10054955
421 Ga0171462_1006
422 Ga0157374_10021025
423 Ga0157378_10013862
424 Ga0157378_10059637
425 Ga0157378_10595433
426 Ga0157378_10725414
427 Ga0157375_10047039
428 Ga0157375_10617035
429 Ga0163163_10006679
430 Ga0157380_10044892
431 Ga0157380_10480520
432 Ga0157377_10292127
433 Ga0157377_10353350
434 Ga0157379_10139774
435 Ga0157379_10415641
436 Ga0157376_10005398
437 Ga0157376_10141697
438 Ga0182005_1059482
439 Ga0163161_10011438
440 Ga0209564_1000065
441 Ga0207642_10000956
442 Ga0207642_10028316
443 Ga0207645_10279051
444 Ga0207654_10038138
445 Ga0207671_10086920
446 Ga0207660_10034627
447 Ga0207662_10000223
448 Ga0207649_10038084
449 Ga0207652_10023573
450 Ga0207687_10004738
451 Ga0207644_10237673
452 Ga0207706_10002983
453 Ga0207686_10000347
454 Ga0207686_10012448
455 Ga0207709_10006525
456 Ga0207670_10018604
457 Ga0207670_10030630
458 Ga0207704_10031289
459 Ga0207691_10418695
460 Ga0207689_10000913
461 Ga0207689_10004114
462 Ga0207661_10534197
463 Ga0207667_10032282
464 Ga0207712_10003645
465 Ga0207712_10582080
466 Ga0207668_10424615
467 Ga0207640_10052089
468 Ga0207658_10038125
469 Ga0207658_10103733
470 Ga0207677_10023238
471 Ga0207703_10005249
472 Ga0207703_10213592
473 Ga0207639_10194022
474 Ga0207708_10001045
475 Ga0207702_10027857
476 Ga0207641_10012066
477 Ga0207641_10319288
478 Ga0207648_10001327
479 Ga0207675_100004252
480 Ga0207675_100164192
481 Ga0207683_10028036
482 Ga0209967_1007666
483 Ga0209966_1003720
484 Ga0207428_10000688
485 Ga0268265_10049280
486 Ga0268264_10004138
487 Ga0268264_10203707
488 Ga0307515_10202752
489 Ga0265331_10156810
490 Ga0307408_100266471
491 Ga0307405_10216115
492 Ga0307413_10033378
493 Ga0307410_10045761
494 Ga0307410_10170739
495 Ga0307414_10283064
496 Ga0307411_10245642
497 Ga0373930_0004323
498 Ga0373950_0003095
499 Ga0373959_0047862
500 Ga0373938_0000953
501 Ga0373926_0006392
502 Ga0373929_0003773
503 Ga0373949_0003043
504 Ga0373932_0003588
505 Ga0373936_0002438
506 Ga0373941_0000999
507 Ga0373943_0001751
508 Ga0373946_0006143
509 Ga0373942_0002763
510 Ga0373962_0002518
511 Ga0373931_0000108
512 Ga0373931_0205220
513 Ga0373935_0059015
514 Ga0373927_0020003
515 Ga0373947_0077118
516 Ga0373947_0139562
517 Ga0373925_0005007
518 Ga0400489_61686
519 Ga0450923_031276
520 Ga0466972_0007679
521 Ga0466968_0003813
522 Ga0466960_0055929
523 Ga0451576_0037247
524 Ga0451576_0568491
525 Ga0495603_0007718
526 Ga0495580_0007563
527 Ga0495639_0050155
528 Ga0495594_0043773
529 Ga0495586_0018741
530 Ga0495598_0041266
531 Ga0495656_0016503
532 Ga0495659_0036427
533 Ga0495647_0000131
534 Ga0495658_0014400
535 Ga0495672_0131632
536 Ga0495680_0109865
537 Ga0496106_0387865
538 Ga0496108_0000011
539 Ga0496114_0178909
540 Ga0496122_0129755
541 Ga0501031_0046967
542 Ga0501032_0078877
543 Ga0501033_0027455
544 Ga0501033_0146603
545 Ga0501034_0177065
546 Ga0501036_0007126
547 Ga0501036_0161036
548 Ga0501038_0002619
549 Ga0501039_0022384
550 Ga0501040_0000846
551 Ga0501040_0021215
552 Ga0501041_0002579
553 Ga0501041_0030733
554 Ga0501042_0001037
555 Ga0501042_0032915
556 Ga0501042_0086451
557 Ga0501046_0001577
558 Ga0501048_0020407
559 Ga0501068_0005360
560 Ga0501070_0065571
561 Ga0501071_0000428
562 Ga0501071_0008023
563 Ga0501071_0064969
564 Ga0501072_0000896
565 Ga0501072_0005389
566 Ga0501072_0046040
567 Ga0501074_0005368
568 Ga0501074_0054763
569 Ga0501075_0001354
570 Ga0501075_0209884
571 Ga0501076_0001866
572 Ga0501076_0003155
573 Ga0501076_0257925
574 Ga0501076_0703361
575 Ga0501077_0000758
576 Ga0501077_0078477
577 Ga0501249_085804
578 Ga0501079_0035235
579 Ga0501079_0131651
580 Ga0501080_0008023
581 Ga0501081_0055946
582 Ga0501081_0079805
583 Ga0501035_0003301
584 Ga0501044_0911745
585 Ga0501045_0001196
586 Ga0501045_0020703
587 nmdc:mga03683_81950_c1
588 nmdc:mga07m45_47654_c1
589 nmdc:mga05p37_200_c1
590 nmdc:mga05p37_264405_c1
591 nmdc:mga05p37_58329_c1
592 nmdc:mga05p37_665302_c1
593 nmdc:mga09592_10_c1
594 nmdc:mga09592_178565_c1
595 nmdc:mga0qj67_16229_c1
596 nmdc:mga0qj67_1788_c1
597 nmdc:mga0qj67_229598_c1
598 nmdc:mga06r32_181334_c1
599 nmdc:mga06r32_207171_c1
600 nmdc:mga06r32_229587_c1
601 nmdc:mga06r32_23336_c1
602 nmdc:mga06r32_627016_c1
603 nmdc:mga08y16_2521_c1
604 Ga0500616_0016598
605 Ga0500616_0020550
606 Ga0500622_0026181
607 Ga0501084_0014860
608 Ga0501084_0074218
609 Ga0501082_0000187
610 Ga0501082_0010085
611 Ga0530510_0000384
612 Ga0530510_0000779
613 2508729311
614 2509077873
615 2644732255
616 2644745351
617 2776258736
618 2835312937
619 2841760862
620 2841912859
621 2841918606
622 2844106519
623 2851187510
624 2851246875
625 2884300845
626 2894242430
627 2917704732
628 8057530922

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

24

174

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9707 12 236
5lj9-assembly3.cif.gz_C structure of the e. coli macb abc domain (c2221) 0.9697 12 236
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.9691 15 236
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9685 14 236
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9679 12 235
ID Description Score Start End Superfamily
af_P75957_1_229_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9839 11 231 3.40.50.300
af_Q8T665_1_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9688 8 236 3.40.50.300
5xu1A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9651 12 235 3.40.50.300
af_P14175_33_289_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9646 33 240 3.40.50.300
2pclA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9631 12 236 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A382FBJ4-F1-model_v4 ABC transporter domain-containing protein 0.9933 96 235 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A5C6XAL3-F1-model_v4 ABC transporter ATP-binding protein 0.9827 15 236 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A7V4MYJ4-F1-model_v4 ABC transporter ATP-binding protein 0.9826 11 237 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A661EMY2-F1-model_v4 Macrolide ABC transporter ATP-binding protein 0.9797 15 236 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A843EBV0-F1-model_v4 ABC transporter ATP-binding protein 0.9797 39 237 GO:0005524
GO:0005886
GO:0016887
GO:0022857

Map