F402594

General Info

Members Datasets Scaffolds Average Seq Length
314 162 628 329

Family's Representative Sequence

Representative Sequence 3300005564|Ga0070664_100380448|Ga0070664_1003804482
Length 367
Sequence LQHSCCNEREINCAINLDKLIELVLVQIDFYHLKARTKMKKIAINGFGRIGRAALKVITDTPGLEVVAVNDLMSIDNAAYLLTYDSVYGKYKNKISIHENNLHVNDRKILFISEKDPAKLPWKKLEIDVVIESTGIFTNREDAEKHIHAGAKNVVISAPTKSADTPTIIHGVNSAEGKVSIFSCASCTTNNIAPIIEIIDRRIGIKKAILNTVHAYTASQSLVDAPSKKRIRMGRAAAINLVPATTGAAKATIKALPKFDGKFDGIAIRTPVTVGSISDITFLAAKNTSVDEINKVLIEESQTDRYKLVLSVSNEPLVSSDIVQSSFAAVVDLEMTRVVDGDLVKIMAWYDNEWGFTNQMIRQIQEI

Samples

Sample ID Description Type Environment
1 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
37 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
60 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
61 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
91 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
92 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
93 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
94 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
106 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
115 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
116 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
121 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
122 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
126 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
130 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
131 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
132 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
133 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
134 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
135 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
136 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
147 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
148 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
152 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
153 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
154 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
155 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
156 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
157 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
158 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
159 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
160 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
161 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
162 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.5
Metatranscriptomes 0
Isolates 3.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.05
Nodule 0.96
Rhizoplane 0
Rhizosphere 86.62
Stem 0
Stem Tuber 0
Unclassified 1.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070664_100380448 3300005564 Bacteria 1288
2 JGI24740J21852_10000520 3300001979 Bacteria 16552
3 JGI24739J22299_10004857 3300001989 Bacteria 5122
4 JGI25154J39366_1000037 3300002738 Bacteria 157573
5 JGI25153J46596_10000321 3300003215 Bacteria 35294
6 rootH1_10083156 3300003316 Bacteria 6920
7 rootH2_10022351 3300003320 Bacteria 17404
8 rootH2_10130517 3300003320 Bacteria 1448
9 rootH2_10338390 3300003320 Bacteria 2031
10 rootL2_10001896 3300003322 Bacteria 54565
11 JGI25160J50197_1001847 3300003354 Bacteria 10160
12 JGI25160J50197_1003613 3300003354 Bacteria 6869
13 JGI25407J50210_10000651 3300003373 Bacteria 7144
14 JGI25407J50210_10003056 3300003373 Bacteria 3990
15 JGI25407J50210_10008216 3300003373 Bacteria 2630
16 JGI25407J50210_10013590 3300003373 Bacteria 2094
17 JGI25407J50210_10017316 3300003373 Bacteria 1870
18 Ga0055530_10000549 3300003791 Bacteria 32537
19 Ga0065165_1000071 3300005262 Bacteria 166883
20 Ga0065714_10071169 3300005288 Bacteria 3647
21 Ga0065714_10075727 3300005288 Bacteria 2873
22 Ga0065704_10000496 3300005289 Bacteria 19904
23 Ga0070658_10073851 3300005327 Bacteria 2797
24 Ga0070658_10113270 3300005327 Bacteria 2249
25 Ga0070683_100003223 3300005329 Bacteria 13169
26 Ga0070680_100002195 3300005336 Bacteria 14392
27 Ga0070682_100007011 3300005337 Bacteria 6337
28 Ga0070682_100069650 3300005337 Bacteria 2247
29 Ga0070660_100006827 3300005339 Bacteria 7920
30 Ga0070691_10006722 3300005341 Bacteria 5264
31 Ga0070661_100020702 3300005344 Bacteria 4691
32 Ga0070692_10022734 3300005345 Bacteria 3066
33 Ga0070659_100040707 3300005366 Bacteria 3631
34 Ga0070667_100179985 3300005367 Bacteria 1869
35 Ga0070662_100023127 3300005457 Bacteria 4266
36 Ga0070681_10077877 3300005458 Bacteria 3272
37 Ga0070679_100001653 3300005530 Bacteria 20083
38 Ga0070679_100008159 3300005530 Bacteria 9839
39 Ga0070679_100045880 3300005530 Bacteria 4354
40 Ga0070679_100077460 3300005530 Bacteria 3314
41 Ga0070679_100078793 3300005530 Bacteria 3284
42 Ga0070684_100004620 3300005535 Bacteria 10499
43 Ga0070684_100112445 3300005535 Bacteria 2443
44 Ga0070684_100161788 3300005535 Bacteria 2031
45 Ga0070684_100378980 3300005535 Bacteria 1303
46 Ga0068853_100012647 3300005539 Bacteria 6870
47 Ga0068853_100046510 3300005539 Unclassified 3721
48 Ga0068853_100095591 3300005539 Bacteria 2620
49 Ga0068855_100003250 3300005563 Bacteria 19873
50 Ga0068855_100013158 3300005563 Bacteria 9980
51 Ga0068855_100024266 3300005563 Bacteria 7260
52 Ga0068855_100024446 3300005563 Bacteria 7227
53 Ga0068855_100057214 3300005563 Bacteria 4571
54 Ga0068855_100068353 3300005563 Bacteria 4136
55 Ga0068855_100081810 3300005563 Unclassified 3743
56 Ga0068855_100098972 3300005563 Unclassified 3359
57 Ga0068855_100179442 3300005563 Bacteria 2395
58 Ga0070664_100082466 3300005564 Bacteria 2773
59 Ga0070664_100180262 3300005564 Bacteria 1877
60 Ga0068856_100028722 3300005614 Bacteria 5433
61 Ga0068852_100037094 3300005616 Bacteria 4084
62 Ga0068852_100044857 3300005616 Bacteria 3758
63 Ga0068852_100075507 3300005616 Bacteria 2973
64 Ga0081455_10010287 3300005937 Bacteria 9512
65 Ga0081538_10000569 3300005981 Bacteria 40868
66 Ga0081538_10001429 3300005981 Bacteria 24542
67 Ga0081538_10001594 3300005981 Bacteria 23286
68 Ga0081538_10004570 3300005981 Bacteria 12739
69 Ga0081538_10006423 3300005981 Bacteria 10352
70 Ga0081538_10013700 3300005981 Bacteria 6408
71 Ga0068871_100086552 3300006358 Bacteria 2604
72 Ga0099824_1009673 3300006942 Bacteria 11735
73 Ga0099826_10001865 3300006948 Bacteria 13137
74 Ga0075435_100125230 3300007076 Bacteria 2147
75 Ga0105240_10002934 3300009093 Bacteria 26901
76 Ga0105240_10010583 3300009093 Bacteria 12959
77 Ga0105240_10018791 3300009093 Bacteria 9260
78 Ga0105240_10213463 3300009093 Bacteria 2253
79 Ga0111539_10090180 3300009094 Bacteria 3603
80 Ga0111539_10431251 3300009094 Bacteria 1535
81 Ga0105247_10274357 3300009101 Bacteria 1161
82 Ga0105243_10000004 3300009148 Bacteria 601266
83 Ga0105241_10001033 3300009174 Bacteria 21215
84 Ga0105241_10053924 3300009174 Bacteria 3077
85 Ga0105242_10082965 3300009176 Bacteria 2683
86 Ga0105237_10000369 3300009545 Bacteria 63892
87 Ga0105237_10008419 3300009545 Bacteria 11169
88 Ga0105237_10022735 3300009545 Bacteria 6433
89 Ga0105239_10002499 3300010375 Bacteria 23410
90 Ga0105239_10069614 3300010375 Bacteria 3866
91 Ga0105239_10104807 3300010375 Bacteria 3131
92 Ga0157373_10009771 3300013100 Bacteria 7076
93 Ga0157373_10022921 3300013100 Bacteria 4528
94 Ga0157373_10024560 3300013100 Bacteria 4365
95 Ga0157373_10027545 3300013100 Bacteria 4100
96 Ga0157373_10048165 3300013100 Bacteria 3039
97 Ga0157373_10072386 3300013100 Bacteria 2433
98 Ga0157373_10076037 3300013100 Bacteria 2370
99 Ga0157373_10128343 3300013100 Bacteria 1783
100 Ga0157371_10000326 3300013102 Bacteria 61810
101 Ga0157371_10007276 3300013102 Bacteria 8992
102 Ga0157371_10009328 3300013102 Bacteria 7735
103 Ga0157371_10011282 3300013102 Bacteria 6899
104 Ga0157371_10014996 3300013102 Bacteria 5827
105 Ga0157371_10061838 3300013102 Bacteria 2655
106 Ga0157371_10071495 3300013102 Bacteria 2456
107 Ga0157370_10000103 3300013104 Bacteria 97072
108 Ga0157370_10000251 3300013104 Bacteria 68272
109 Ga0157370_10004217 3300013104 Bacteria 16627
110 Ga0157370_10006784 3300013104 Bacteria 12559
111 Ga0157370_10011832 3300013104 Bacteria 9105
112 Ga0157370_10019253 3300013104 Bacteria 6854
113 Ga0157370_10074110 3300013104 Bacteria 3211
114 Ga0157370_10148425 3300013104 Bacteria 2183
115 Ga0157369_10010659 3300013105 Bacteria 10462
116 Ga0157369_10023139 3300013105 Bacteria 6923
117 Ga0157369_10039708 3300013105 Bacteria 5142
118 Ga0157369_10080384 3300013105 Bacteria 3490
119 Ga0157369_10181601 3300013105 Bacteria 2214
120 Ga0157378_10156490 3300013297 Bacteria 2128
121 Ga0163162_10034569 3300013306 Bacteria 5031
122 Ga0163162_10284752 3300013306 Bacteria 1784
123 Ga0157372_10019104 3300013307 Bacteria 7378
124 Ga0157372_10067997 3300013307 Bacteria 4005
125 Ga0157372_10069098 3300013307 Bacteria 3973
126 Ga0157372_10266417 3300013307 Bacteria 1990
127 Ga0157372_10284336 3300013307 Bacteria 1923
128 Ga0157372_10285724 3300013307 Bacteria 1918
129 Ga0157372_10401678 3300013307 Bacteria 1597
130 Ga0157372_10538969 3300013307 Bacteria 1361
131 Ga0157375_10000122 3300013308 Bacteria 76245
132 Ga0157379_10290215 3300014968 Bacteria 1490
133 Ga0157379_10457256 3300014968 Bacteria 1179
134 Ga0157376_10058349 3300014969 Bacteria 3232
135 Ga0157376_10121670 3300014969 Bacteria 2314
136 Ga0182006_1000113 3300015261 Bacteria 86691
137 Ga0163161_10000097 3300017792 Bacteria 84842
138 Ga0163161_10000124 3300017792 Bacteria 72378
139 Ga0209646_1000003 3300025246 Bacteria 1160860
140 Ga0209026_1000166 3300025250 Bacteria 101237
141 Ga0209673_1033294 3300025273 Bacteria 1574
142 Ga0209564_1008041 3300025295 Bacteria 5286
143 Ga0209758_1000773 3300025297 Bacteria 45910
144 Ga0209758_1002629 3300025297 Bacteria 17844
145 Ga0209758_1012821 3300025297 Bacteria 4643
146 Ga0209050_1000564 3300025298 Bacteria 60308
147 Ga0207426_1000059 3300025302 Bacteria 363842
148 Ga0207426_1002502 3300025302 Bacteria 11603
149 Ga0207426_1005409 3300025302 Bacteria 5837
150 Ga0207426_1015387 3300025302 Bacteria 2774
151 Ga0209257_1005824 3300025304 Bacteria 8360
152 Ga0207680_10128763 3300025903 Bacteria 1665
153 Ga0207647_10035718 3300025904 Bacteria 3165
154 Ga0207705_10018968 3300025909 Bacteria 4918
155 Ga0207705_10046965 3300025909 Bacteria 3104
156 Ga0207654_10244362 3300025911 Bacteria 1201
157 Ga0207707_10001394 3300025912 Bacteria 22410
158 Ga0207695_10000241 3300025913 Bacteria 142030
159 Ga0207695_10021263 3300025913 Bacteria 7409
160 Ga0207695_10031132 3300025913 Bacteria 5857
161 Ga0207671_10001816 3300025914 Bacteria 23813
162 Ga0207671_10055873 3300025914 Bacteria 2925
163 Ga0207660_10003302 3300025917 Bacteria 10550
164 Ga0207660_10091601 3300025917 Bacteria 2255
165 Ga0207657_10000726 3300025919 Bacteria 35049
166 Ga0207657_10011957 3300025919 Bacteria 8590
167 Ga0207649_10025384 3300025920 Bacteria 3454
168 Ga0207652_10000160 3300025921 Bacteria 72867
169 Ga0207652_10002281 3300025921 Bacteria 16273
170 Ga0207652_10003607 3300025921 Bacteria 12749
171 Ga0207652_10004387 3300025921 Bacteria 11496
172 Ga0207652_10072379 3300025921 Bacteria 2997
173 Ga0207652_10123903 3300025921 Bacteria 2301
174 Ga0207690_10010394 3300025932 Bacteria 5529
175 Ga0207690_10198672 3300025932 Bacteria 1521
176 Ga0207706_10044551 3300025933 Bacteria 3932
177 Ga0207709_10000010 3300025935 Bacteria 601305
178 Ga0207661_10002765 3300025944 Bacteria 12089
179 Ga0207661_10415424 3300025944 Bacteria 1221
180 Ga0207679_10201826 3300025945 Bacteria 1661
181 Ga0207667_10000325 3300025949 Bacteria 66276
182 Ga0207667_10030716 3300025949 Bacteria 5807
183 Ga0207667_10071156 3300025949 Bacteria 3618
184 Ga0207667_10076492 3300025949 Unclassified 3473
185 Ga0207667_10187430 3300025949 Bacteria 2123
186 Ga0207667_10377037 3300025949 Bacteria 1445
187 Ga0207640_10054606 3300025981 Bacteria 2613
188 Ga0207640_10113281 3300025981 Bacteria 1927
189 Ga0207640_10316464 3300025981 Bacteria 1241
190 Ga0207639_10043194 3300026041 Unclassified 3383
191 Ga0207639_10113510 3300026041 Bacteria 2213
192 Ga0207639_10119886 3300026041 Bacteria 2160
193 Ga0207639_10197642 3300026041 Bacteria 1722
194 Ga0207678_10248308 3300026067 Bacteria 1524
195 Ga0207702_10050706 3300026078 Bacteria 3504
196 Ga0207674_10027368 3300026116 Bacteria 6033
197 Ga0207698_10015376 3300026142 Bacteria 5122
198 Ga0207698_10036935 3300026142 Bacteria 3592
199 Ga0207698_10160275 3300026142 Bacteria 1966
200 Ga0209489_112195 3300027361 Bacteria 8043
201 Ga0316177_1217789 3300030731 Bacteria 12102
202 Ga0316176_1037837 3300030732 Bacteria 15771
203 Ga0316183_1051953 3300030742 Bacteria 6562
204 Ga0316181_1195643 3300030744 Bacteria 7281
205 Ga0316181_1243441 3300030744 Unclassified 2295
206 Ga0307408_100074832 3300031548 Bacteria 2514
207 Ga0307405_10000028 3300031731 Bacteria 117832
208 Ga0307405_10068416 3300031731 Bacteria 2272
209 Ga0307405_10078567 3300031731 Bacteria 2148
210 Ga0307413_10199993 3300031824 Bacteria 1442
211 Ga0307410_10042402 3300031852 Bacteria 3007
212 Ga0307410_10045785 3300031852 Bacteria 2915
213 Ga0307410_10232380 3300031852 Bacteria 1424
214 Ga0307406_10036839 3300031901 Bacteria 3016
215 Ga0307406_10200585 3300031901 Bacteria 1468
216 Ga0307407_10000020 3300031903 Bacteria 126218
217 Ga0307407_10023943 3300031903 Bacteria 3193
218 Ga0307407_10110436 3300031903 Bacteria 1725
219 Ga0307407_10153550 3300031903 Bacteria 1499
220 Ga0307407_10303122 3300031903 Bacteria 1115
221 Ga0307412_10003622 3300031911 Bacteria 8584
222 Ga0307412_10008491 3300031911 Bacteria 5868
223 Ga0307412_10199664 3300031911 Bacteria 1518
224 Ga0307412_10266505 3300031911 Bacteria 1338
225 Ga0307409_100018966 3300031995 Bacteria 4644
226 Ga0307409_100036776 3300031995 Bacteria 3602
227 Ga0307409_100059552 3300031995 Bacteria 2972
228 Ga0307409_100068757 3300031995 Bacteria 2802
229 Ga0307409_100124577 3300031995 Bacteria 2189
230 Ga0307409_100273708 3300031995 Bacteria 1556
231 Ga0307409_100351704 3300031995 Bacteria 1391
232 Ga0307416_100000042 3300032002 Bacteria 130512
233 Ga0307416_100000943 3300032002 Bacteria 15393
234 Ga0307416_100031827 3300032002 Bacteria 3976
235 Ga0307416_100078240 3300032002 Bacteria 2781
236 Ga0307416_100095903 3300032002 Bacteria 2563
237 Ga0307416_100193658 3300032002 Bacteria 1920
238 Ga0307416_100305439 3300032002 Bacteria 1584
239 Ga0307414_10004358 3300032004 Bacteria 7679
240 Ga0307414_10152939 3300032004 Bacteria 1823
241 Ga0307411_10095626 3300032005 Bacteria 2086
242 Ga0307415_100007453 3300032126 Bacteria 5987
243 Ga0307415_100025792 3300032126 Bacteria 3696
244 Ga0307415_100200293 3300032126 Bacteria 1584
245 Ga0307415_100236755 3300032126 Bacteria 1474
246 Ga0373937_0222100 3300036401 Bacteria 1778
247 Ga0373937_0524785 3300036401 Bacteria 1125
248 Ga0316582_0271852 3300036647 Bacteria 1163
249 Ga0395899_0001724 3300037312 Bacteria 18183
250 Ga0395899_0002031 3300037312 Bacteria 16655
251 Ga0395899_0017870 3300037312 Bacteria 5400
252 Ga0395899_0033930 3300037312 Bacteria 3831
253 Ga0395899_0104411 3300037312 Bacteria 2042
254 Ga0395900_0027231 3300037418 Bacteria 5853
255 Ga0395900_0095200 3300037418 Bacteria 3059
256 Ga0395898_0000738 3300037466 Bacteria 57155
257 Ga0395898_0009784 3300037466 Bacteria 10047
258 Ga0395898_0044431 3300037466 Bacteria 4372
259 Ga0395905_0045570 3300037471 Bacteria 4113
260 Ga0395901_0001002 3300038443 Bacteria 30541
261 Ga0395901_0011343 3300038443 Bacteria 9030
262 Ga0395901_0035818 3300038443 Bacteria 5128
263 Ga0395901_0057889 3300038443 Bacteria 4031
264 Ga0439448_0049019 3300042005 Bacteria 1380
265 Ga0439463_017342 3300042016 Bacteria 1785
266 Ga0439440_0003399 3300042993 Bacteria 3067
267 Ga0495651_0080072 3300046462 Bacteria 2468
268 Ga0495610_0000060 3300046512 Bacteria 131116
269 Ga0495686_0000112 3300047472 Bacteria 168354
270 Ga0495686_0048184 3300047472 Bacteria 2688
271 Ga0496121_0043434 3300048924 Bacteria 3892
272 Ga0496122_0006098 3300048925 Bacteria 14037
273 Ga0496125_0000012 3300048928 Bacteria 651142
274 Ga0496125_0035758 3300048928 Bacteria 4350
275 Ga0501034_0095744 3300049571 Bacteria 2965
276 Ga0501047_0263737 3300049581 Bacteria 1570
277 Ga0501067_0063523 3300049583 Bacteria 2044
278 Ga0501068_0028255 3300049584 Bacteria 3316
279 Ga0501070_0031414 3300049586 Bacteria 4450
280 Ga0501073_0013398 3300049589 Bacteria 5965
281 Ga0501198_015427 3300049649 Bacteria 1173
282 Ga0501235_009193 3300049669 Bacteria 2160
283 Ga0501242_004925 3300049674 Bacteria 1492
284 Ga0501243_006539 3300049675 Bacteria 1767
285 Ga0501257_001548 3300049686 Bacteria 4797
286 Ga0501259_015431 3300049688 Bacteria 1304
287 Ga0501221_007827 3300049704 Bacteria 1844
288 Ga0501225_0032593 3300049705 Bacteria 1433
289 Ga0501080_0094053 3300049742 Bacteria 2783
290 Ga0501263_000419 3300049760 Bacteria 3098
291 Ga0501035_0054391 3300049822 Bacteria 3577
292 Ga0501044_0090247 3300049823 Bacteria 3092
293 nmdc:mga05p37_142146_c1 3300050507 Bacteria 2940
294 nmdc:mga08y16_489125_c1 3300050511 Bacteria 1251
295 nmdc:mga0n895_190166_c1 3300050512 Bacteria 2084
296 nmdc:mga0rr50_138718_c1 3300050513 Bacteria 1954
297 nmdc:mga0a205_7249_c1 3300050515 Bacteria 10027
298 Ga0500646_0020056 3300053090 Bacteria 1773
299 Ga0500641_0000019 3300053096 Bacteria 123198
300 Ga0500559_0021399 3300053136 Bacteria 2741
301 Ga0501084_0036012 3300054114 Bacteria 4135
302 Ga0590075_002654 3300059424 Bacteria 4273
303 Ga0501082_0259533 3300060353 Bacteria 1511
304 2644372319 2643221667 Bacteria 5627472
305 2644640765 2643221716 Bacteria 4986332
306 2644685996 2643221725 Bacteria 5087956
307 2740001576 2739367857 Bacteria 5433684
308 2740006392 2739367858 Bacteria 5432813
309 2842906672 2842903701 Bacteria 6986368
310 2881248290 2881247448 Bacteria 3717788
311 2896115031 2896109856 Bacteria 7140722
312 2929923882 2929921140 Bacteria 8649150
313 8003156651 8003151029 Bacteria 8187759
314 8055422440 8055419101 Bacteria 5289643
315 Ga0070664_100380448
316 JGI24740J21852_10000520
317 JGI24739J22299_10004857
318 JGI25154J39366_1000037
319 JGI25153J46596_10000321
320 rootH1_10083156
321 rootH2_10022351
322 rootH2_10130517
323 rootH2_10338390
324 rootL2_10001896
325 JGI25160J50197_1001847
326 JGI25160J50197_1003613
327 JGI25407J50210_10000651
328 JGI25407J50210_10003056
329 JGI25407J50210_10008216
330 JGI25407J50210_10013590
331 JGI25407J50210_10017316
332 Ga0055530_10000549
333 Ga0065165_1000071
334 Ga0065714_10071169
335 Ga0065714_10075727
336 Ga0065704_10000496
337 Ga0070658_10073851
338 Ga0070658_10113270
339 Ga0070683_100003223
340 Ga0070680_100002195
341 Ga0070682_100007011
342 Ga0070682_100069650
343 Ga0070660_100006827
344 Ga0070691_10006722
345 Ga0070661_100020702
346 Ga0070692_10022734
347 Ga0070659_100040707
348 Ga0070667_100179985
349 Ga0070662_100023127
350 Ga0070681_10077877
351 Ga0070679_100001653
352 Ga0070679_100008159
353 Ga0070679_100045880
354 Ga0070679_100077460
355 Ga0070679_100078793
356 Ga0070684_100004620
357 Ga0070684_100112445
358 Ga0070684_100161788
359 Ga0070684_100378980
360 Ga0068853_100012647
361 Ga0068853_100046510
362 Ga0068853_100095591
363 Ga0068855_100003250
364 Ga0068855_100013158
365 Ga0068855_100024266
366 Ga0068855_100024446
367 Ga0068855_100057214
368 Ga0068855_100068353
369 Ga0068855_100081810
370 Ga0068855_100098972
371 Ga0068855_100179442
372 Ga0070664_100082466
373 Ga0070664_100180262
374 Ga0068856_100028722
375 Ga0068852_100037094
376 Ga0068852_100044857
377 Ga0068852_100075507
378 Ga0081455_10010287
379 Ga0081538_10000569
380 Ga0081538_10001429
381 Ga0081538_10001594
382 Ga0081538_10004570
383 Ga0081538_10006423
384 Ga0081538_10013700
385 Ga0068871_100086552
386 Ga0099824_1009673
387 Ga0099826_10001865
388 Ga0075435_100125230
389 Ga0105240_10002934
390 Ga0105240_10010583
391 Ga0105240_10018791
392 Ga0105240_10213463
393 Ga0111539_10090180
394 Ga0111539_10431251
395 Ga0105247_10274357
396 Ga0105243_10000004
397 Ga0105241_10001033
398 Ga0105241_10053924
399 Ga0105242_10082965
400 Ga0105237_10000369
401 Ga0105237_10008419
402 Ga0105237_10022735
403 Ga0105239_10002499
404 Ga0105239_10069614
405 Ga0105239_10104807
406 Ga0157373_10009771
407 Ga0157373_10022921
408 Ga0157373_10024560
409 Ga0157373_10027545
410 Ga0157373_10048165
411 Ga0157373_10072386
412 Ga0157373_10076037
413 Ga0157373_10128343
414 Ga0157371_10000326
415 Ga0157371_10007276
416 Ga0157371_10009328
417 Ga0157371_10011282
418 Ga0157371_10014996
419 Ga0157371_10061838
420 Ga0157371_10071495
421 Ga0157370_10000103
422 Ga0157370_10000251
423 Ga0157370_10004217
424 Ga0157370_10006784
425 Ga0157370_10011832
426 Ga0157370_10019253
427 Ga0157370_10074110
428 Ga0157370_10148425
429 Ga0157369_10010659
430 Ga0157369_10023139
431 Ga0157369_10039708
432 Ga0157369_10080384
433 Ga0157369_10181601
434 Ga0157378_10156490
435 Ga0163162_10034569
436 Ga0163162_10284752
437 Ga0157372_10019104
438 Ga0157372_10067997
439 Ga0157372_10069098
440 Ga0157372_10266417
441 Ga0157372_10284336
442 Ga0157372_10285724
443 Ga0157372_10401678
444 Ga0157372_10538969
445 Ga0157375_10000122
446 Ga0157379_10290215
447 Ga0157379_10457256
448 Ga0157376_10058349
449 Ga0157376_10121670
450 Ga0182006_1000113
451 Ga0163161_10000097
452 Ga0163161_10000124
453 Ga0209646_1000003
454 Ga0209026_1000166
455 Ga0209673_1033294
456 Ga0209564_1008041
457 Ga0209758_1000773
458 Ga0209758_1002629
459 Ga0209758_1012821
460 Ga0209050_1000564
461 Ga0207426_1000059
462 Ga0207426_1002502
463 Ga0207426_1005409
464 Ga0207426_1015387
465 Ga0209257_1005824
466 Ga0207680_10128763
467 Ga0207647_10035718
468 Ga0207705_10018968
469 Ga0207705_10046965
470 Ga0207654_10244362
471 Ga0207707_10001394
472 Ga0207695_10000241
473 Ga0207695_10021263
474 Ga0207695_10031132
475 Ga0207671_10001816
476 Ga0207671_10055873
477 Ga0207660_10003302
478 Ga0207660_10091601
479 Ga0207657_10000726
480 Ga0207657_10011957
481 Ga0207649_10025384
482 Ga0207652_10000160
483 Ga0207652_10002281
484 Ga0207652_10003607
485 Ga0207652_10004387
486 Ga0207652_10072379
487 Ga0207652_10123903
488 Ga0207690_10010394
489 Ga0207690_10198672
490 Ga0207706_10044551
491 Ga0207709_10000010
492 Ga0207661_10002765
493 Ga0207661_10415424
494 Ga0207679_10201826
495 Ga0207667_10000325
496 Ga0207667_10030716
497 Ga0207667_10071156
498 Ga0207667_10076492
499 Ga0207667_10187430
500 Ga0207667_10377037
501 Ga0207640_10054606
502 Ga0207640_10113281
503 Ga0207640_10316464
504 Ga0207639_10043194
505 Ga0207639_10113510
506 Ga0207639_10119886
507 Ga0207639_10197642
508 Ga0207678_10248308
509 Ga0207702_10050706
510 Ga0207674_10027368
511 Ga0207698_10015376
512 Ga0207698_10036935
513 Ga0207698_10160275
514 Ga0209489_112195
515 Ga0316177_1217789
516 Ga0316176_1037837
517 Ga0316183_1051953
518 Ga0316181_1195643
519 Ga0316181_1243441
520 Ga0307408_100074832
521 Ga0307405_10000028
522 Ga0307405_10068416
523 Ga0307405_10078567
524 Ga0307413_10199993
525 Ga0307410_10042402
526 Ga0307410_10045785
527 Ga0307410_10232380
528 Ga0307406_10036839
529 Ga0307406_10200585
530 Ga0307407_10000020
531 Ga0307407_10023943
532 Ga0307407_10110436
533 Ga0307407_10153550
534 Ga0307407_10303122
535 Ga0307412_10003622
536 Ga0307412_10008491
537 Ga0307412_10199664
538 Ga0307412_10266505
539 Ga0307409_100018966
540 Ga0307409_100036776
541 Ga0307409_100059552
542 Ga0307409_100068757
543 Ga0307409_100124577
544 Ga0307409_100273708
545 Ga0307409_100351704
546 Ga0307416_100000042
547 Ga0307416_100000943
548 Ga0307416_100031827
549 Ga0307416_100078240
550 Ga0307416_100095903
551 Ga0307416_100193658
552 Ga0307416_100305439
553 Ga0307414_10004358
554 Ga0307414_10152939
555 Ga0307411_10095626
556 Ga0307415_100007453
557 Ga0307415_100025792
558 Ga0307415_100200293
559 Ga0307415_100236755
560 Ga0373937_0222100
561 Ga0373937_0524785
562 Ga0316582_0271852
563 Ga0395899_0001724
564 Ga0395899_0002031
565 Ga0395899_0017870
566 Ga0395899_0033930
567 Ga0395899_0104411
568 Ga0395900_0027231
569 Ga0395900_0095200
570 Ga0395898_0000738
571 Ga0395898_0009784
572 Ga0395898_0044431
573 Ga0395905_0045570
574 Ga0395901_0001002
575 Ga0395901_0011343
576 Ga0395901_0035818
577 Ga0395901_0057889
578 Ga0439448_0049019
579 Ga0439463_017342
580 Ga0439440_0003399
581 Ga0495651_0080072
582 Ga0495610_0000060
583 Ga0495686_0000112
584 Ga0495686_0048184
585 Ga0496121_0043434
586 Ga0496122_0006098
587 Ga0496125_0000012
588 Ga0496125_0035758
589 Ga0501034_0095744
590 Ga0501047_0263737
591 Ga0501067_0063523
592 Ga0501068_0028255
593 Ga0501070_0031414
594 Ga0501073_0013398
595 Ga0501198_015427
596 Ga0501235_009193
597 Ga0501242_004925
598 Ga0501243_006539
599 Ga0501257_001548
600 Ga0501259_015431
601 Ga0501221_007827
602 Ga0501225_0032593
603 Ga0501080_0094053
604 Ga0501263_000419
605 Ga0501035_0054391
606 Ga0501044_0090247
607 nmdc:mga05p37_142146_c1
608 nmdc:mga08y16_489125_c1
609 nmdc:mga0n895_190166_c1
610 nmdc:mga0rr50_138718_c1
611 nmdc:mga0a205_7249_c1
612 Ga0500646_0020056
613 Ga0500641_0000019
614 Ga0500559_0021399
615 Ga0501084_0036012
616 Ga0590075_002654
617 Ga0501082_0259533
618 2644372319
619 2644640765
620 2644685996
621 2740001576
622 2740006392
623 2842906672
624 2881248290
625 2896115031
626 2929923882
627 8003156651
628 8055422440

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00044

Gp_dh_N

Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

40

140

0.99

PF02800

Gp_dh_C

Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

192

350

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2i5p-assembly1.cif.gz_P crystal structure of glyceraldehyde-3-phosphate dehydrogenase isoform 1 from k. marxianus 0.9587 1 325
2i5p-assembly1.cif.gz_P crystal structure of glyceraldehyde-3-phosphate dehydrogenase isoform 1 from k. marxianus 0.9466 1 325
1vsu-assembly1.cif.gz_A crystal structure of apo-glyceraldehyde 3-phosphate dehydrogenase from cryptosporidium parvum 0.9447 1 323
4dib-assembly2.cif.gz_C the crystal structure of glyceraldehyde-3-phosphate dehydrogenase from bacillus anthracis str. sterne 0.9445 1 326
7u4s-assembly1.cif.gz_D structure of glyceraldehyde-3-phosphate dehydrogenase from candida albicans 0.9443 3 326
ID Description Score Start End Superfamily
af_Q4E4E5_8_153_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.977 1 143 3.40.50.720
af_Q2G032_1_148_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9698 3 143 3.40.50.720
af_C4JBS8_7_153_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.964 6 146 3.40.50.720
1hdgO01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9621 3 145 3.40.50.720
af_F1M2N4_1_129_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9537 23 143 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A378W446-F1-model_v4 GapC protein (EC 1.2.1.12) 0.9939 3 121 GO:0004365
GO:0006096
GO:0051287
AF-A0A349A0G2-F1-model_v4 Type I glyceraldehyde-3-phosphate dehydrogenase 0.9907 3 94 GO:0016620
GO:0051287
AF-F2TY41-F1-model_v4 Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding domain-containing protein 0.9879 3 135 GO:0004365
GO:0005829
GO:0006096
GO:0051287
AF-W7D7Q3-F1-model_v4 Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.9872 3 118 GO:0004365
GO:0006096
GO:0051287
AF-A0A6P0QHM3-F1-model_v4 deleted 0.9853 1 132

Map