F401614

General Info

Members Datasets Scaffolds Average Seq Length
312 180 312 259

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100031453|Ga0068855_1000314533
Length 294
Sequence MCGTLRPCVVFVPAVHVVSYKKVTLMTHMRKVLIVGNWKMHLNTHEASLLLHRLNAHIPVHRDVEVVLAPSMLAIQPLSVEVDRRKFRLAAQNAYFKDEGAYTGEVSFTMLRELVHYALIGHSERRLYFHETLEMVRDKVAAAIRNGITPILFIGETHEERRAGETNQVLHDQLTTALSNLTASDIEHMVIAYEPVWAVSTFDGIFAKPHEVEGAMRRIRHEITELYGERAAQTVRILYGGSVDEQIAPGYMELPDCDGVVPGAASLNYHKFSGIVNSAYRLVQERRKHNGADR

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
55 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013874 Rhizosphere microbial communities from switchgrass harvested rhizosphere in Austin, TX, USA - RS_213 Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
97 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
98 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
99 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
100 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
101 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
102 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
105 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
106 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
107 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
108 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
109 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
110 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
111 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
112 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
113 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
124 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
125 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
128 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
129 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
130 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
148 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
151 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
152 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
153 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
154 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
158 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
159 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
160 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
161 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
162 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
163 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
164 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
165 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
166 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
167 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
168 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
169 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
170 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
173 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
174 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
175 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
178 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
179 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
180 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.99
Nodule 0
Rhizoplane 0
Rhizosphere 82.05
Stem 0
Stem Tuber 0
Unclassified 0.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1001186 3300001915 Bacteria 7694
2 JGI24740J21852_10013870 3300001979 Bacteria 2991
3 JGI24737J22298_10000039 3300001990 Bacteria 37638
4 JGI24735J21928_10000018 3300002067 Bacteria 109218
5 rootH1_10128918 3300003316 Bacteria 2150
6 rootH2_10000244 3300003320 Bacteria 697651
7 rootH2_10315243 3300003320 Unclassified 1313
8 Ga0070658_10000724 3300005327 Bacteria 28557
9 Ga0070683_100022194 3300005329 Bacteria 5670
10 Ga0070683_100031422 3300005329 Bacteria 4828
11 Ga0070683_100103646 3300005329 Bacteria 2681
12 Ga0070666_10044897 3300005335 Bacteria 2962
13 Ga0070680_100004159 3300005336 Bacteria 10844
14 Ga0070680_100007511 3300005336 Bacteria 8315
15 Ga0070680_100223569 3300005336 Bacteria 1589
16 Ga0070682_100003887 3300005337 Bacteria 8289
17 Ga0070682_100172760 3300005337 Bacteria 1503
18 Ga0070660_100000121 3300005339 Bacteria 49401
19 Ga0070660_100081238 3300005339 Bacteria 2544
20 Ga0070691_10000836 3300005341 Bacteria 12407
21 Ga0070661_100030829 3300005344 Unclassified 3875
22 Ga0070668_100032538 3300005347 Bacteria 3968
23 Ga0070668_100188262 3300005347 Bacteria 1689
24 Ga0070659_100000287 3300005366 Bacteria 39394
25 Ga0070659_100227339 3300005366 Unclassified 1541
26 Ga0070667_100000001 3300005367 Bacteria 1108638
27 Ga0070667_100001450 3300005367 Bacteria 21236
28 Ga0070714_100000977 3300005435 Bacteria 20432
29 Ga0070713_100105394 3300005436 Bacteria 2449
30 Ga0070681_10067773 3300005458 Bacteria 3537
31 Ga0070681_10069066 3300005458 Bacteria 3500
32 Ga0070681_10518485 3300005458 Bacteria 1105
33 Ga0070679_100000721 3300005530 Bacteria 28532
34 Ga0070679_100006848 3300005530 Bacteria 10631
35 Ga0070679_100249074 3300005530 Bacteria 1733
36 Ga0070679_100313053 3300005530 Bacteria 1519
37 Ga0070679_100387389 3300005530 Bacteria 1344
38 Ga0070684_100814040 3300005535 Unclassified 873
39 Ga0068853_100023113 3300005539 Bacteria 5203
40 Ga0068853_100053070 3300005539 Bacteria 3491
41 Ga0070686_100153803 3300005544 Bacteria 1613
42 Ga0070693_100027400 3300005547 Bacteria 3088
43 Ga0068855_100000001 3300005563 Bacteria 818777
44 Ga0068855_100000413 3300005563 Bacteria 52993
45 Ga0068855_100006404 3300005563 Bacteria 14339
46 Ga0068855_100031453 3300005563 Bacteria 6337
47 Ga0068855_100064674 3300005563 Bacteria 4266
48 Ga0068855_100339699 3300005563 Bacteria 1656
49 Ga0068857_100000012 3300005577 Bacteria 106243
50 Ga0068857_100015425 3300005577 Bacteria 6672
51 Ga0068857_100701908 3300005577 Bacteria 961
52 Ga0068854_100286996 3300005578 Bacteria 1327
53 Ga0068852_100033882 3300005616 Bacteria 4245
54 Ga0068859_100474641 3300005617 Bacteria 1346
55 Ga0068863_100029265 3300005841 Bacteria 5258
56 Ga0068858_100161906 3300005842 Bacteria 2107
57 Ga0068860_100115762 3300005843 Bacteria 2564
58 Ga0068862_100113954 3300005844 Bacteria 2376
59 Ga0081539_10010188 3300005985 Bacteria 7698
60 Ga0075365_10000058 3300006038 Bacteria 34000
61 Ga0075365_10048479 3300006038 Bacteria 2796
62 Ga0075368_10000005 3300006042 Bacteria 55453
63 Ga0075363_100000008 3300006048 Bacteria 46001
64 Ga0075364_10003582 3300006051 Bacteria 8846
65 Ga0075364_10010216 3300006051 Bacteria 5662
66 Ga0075367_10000013 3300006178 Bacteria 38958
67 Ga0075369_10000001 3300006186 Bacteria 299616
68 Ga0075366_10000119 3300006195 Bacteria 32488
69 Ga0075428_100003597 3300006844 Bacteria 16985
70 Ga0075430_100085992 3300006846 Bacteria 2632
71 Ga0097620_100474578 3300006931 Bacteria 1346
72 Ga0105240_10126610 3300009093 Bacteria 3069
73 Ga0105240_10387645 3300009093 Bacteria 1577
74 Ga0105240_10543014 3300009093 Bacteria 1287
75 Ga0111539_10002334 3300009094 Bacteria 25265
76 Ga0105245_10000001 3300009098 Bacteria 939270
77 Ga0105245_10330518 3300009098 Unclassified 1504
78 Ga0105247_10127628 3300009101 Unclassified 1654
79 Ga0105243_10005455 3300009148 Bacteria 9923
80 Ga0105241_10000003 3300009174 Bacteria 839043
81 Ga0105241_10002636 3300009174 Bacteria 13440
82 Ga0105241_10026451 3300009174 Bacteria 4317
83 Ga0105241_10326723 3300009174 Bacteria 1324
84 Ga0105241_10658951 3300009174 Bacteria 951
85 Ga0105238_10000350 3300009551 Bacteria 49662
86 Ga0105238_10106083 3300009551 Bacteria 2791
87 Ga0105238_10284785 3300009551 Unclassified 1634
88 Ga0105238_10349354 3300009551 Unclassified 1468
89 Ga0105249_10003149 3300009553 Bacteria 14273
90 Ga0105249_10421318 3300009553 Bacteria 1369
91 Ga0105249_10671671 3300009553 Bacteria 1095
92 Ga0105033_100848 3300009986 Bacteria 2410
93 Ga0105030_100126 3300009987 Bacteria 5930
94 Ga0105030_100708 3300009987 Bacteria 2944
95 Ga0105239_10006600 3300010375 Bacteria 13435
96 Ga0157373_10309405 3300013100 Bacteria 1122
97 Ga0157371_10013518 3300013102 Bacteria 6196
98 Ga0157370_10196275 3300013104 Bacteria 1873
99 Ga0157369_10000048 3300013105 Bacteria 170482
100 Ga0157369_10025107 3300013105 Bacteria 6619
101 Ga0157369_10039649 3300013105 Bacteria 5147
102 Ga0157369_10163884 3300013105 Bacteria 2345
103 Ga0157369_10476739 3300013105 Bacteria 1291
104 Ga0157378_10604014 3300013297 Bacteria 1109
105 Ga0157372_10002740 3300013307 Bacteria 19039
106 Ga0157372_10062513 3300013307 Bacteria 4172
107 Ga0157372_10245980 3300013307 Unclassified 2076
108 Ga0157372_10248870 3300013307 Unclassified 2063
109 Ga0157514_134332 3300013874 Bacteria 2495
110 Ga0163163_10012017 3300014325 Bacteria 7879
111 Ga0163163_10026941 3300014325 Bacteria 5499
112 Ga0157380_10117596 3300014326 Bacteria 2246
113 Ga0157379_10000952 3300014968 Bacteria 23484
114 Ga0154015_1354249 3300020610 Bacteria 1039
115 Ga0207680_10032630 3300025903 Bacteria 2962
116 Ga0207647_10006638 3300025904 Bacteria 8409
117 Ga0207705_10000011 3300025909 Bacteria 517768
118 Ga0207705_10002502 3300025909 Bacteria 14164
119 Ga0207654_10000002 3300025911 Bacteria 1460142
120 Ga0207654_10001112 3300025911 Bacteria 14530
121 Ga0207654_10344523 3300025911 Bacteria 1024
122 Ga0207707_10004970 3300025912 Bacteria 11686
123 Ga0207707_10028981 3300025912 Bacteria 4838
124 Ga0207707_10161216 3300025912 Bacteria 1961
125 Ga0207695_10032384 3300025913 Bacteria 5721
126 Ga0207695_10156522 3300025913 Unclassified 2213
127 Ga0207695_10455986 3300025913 Bacteria 1161
128 Ga0207660_10499827 3300025917 Bacteria 986
129 Ga0207657_10000772 3300025919 Bacteria 33957
130 Ga0207657_10011989 3300025919 Bacteria 8575
131 Ga0207657_10052701 3300025919 Bacteria 3530
132 Ga0207652_10000874 3300025921 Bacteria 28548
133 Ga0207652_10007350 3300025921 Bacteria 8881
134 Ga0207652_10020165 3300025921 Bacteria 5489
135 Ga0207652_10050850 3300025921 Bacteria 3551
136 Ga0207652_10085925 3300025921 Unclassified 2758
137 Ga0207652_10089024 3300025921 Unclassified 2709
138 Ga0207694_10001075 3300025924 Bacteria 23755
139 Ga0207687_10000001 3300025927 Bacteria 1130810
140 Ga0207687_10000004 3300025927 Bacteria 841177
141 Ga0207664_10001341 3300025929 Bacteria 16176
142 Ga0207690_10000870 3300025932 Bacteria 19292
143 Ga0207661_10038031 3300025944 Bacteria 3769
144 Ga0207667_10000003 3300025949 Bacteria 822935
145 Ga0207667_10000060 3300025949 Bacteria 192320
146 Ga0207667_10000196 3300025949 Bacteria 88101
147 Ga0207667_10026396 3300025949 Bacteria 6347
148 Ga0207667_10053184 3300025949 Bacteria 4261
149 Ga0207667_10081315 3300025949 Unclassified 3356
150 Ga0207667_10201030 3300025949 Bacteria 2044
151 Ga0207667_10295143 3300025949 Bacteria 1656
152 Ga0207668_10159118 3300025972 Bacteria 1758
153 Ga0207668_10299741 3300025972 Bacteria 1326
154 Ga0207640_10173843 3300025981 Unclassified 1608
155 Ga0207658_10000003 3300025986 Bacteria 1151934
156 Ga0207703_10012402 3300026035 Bacteria 6643
157 Ga0207703_10383108 3300026035 Bacteria 1301
158 Ga0207639_10016675 3300026041 Bacteria 5203
159 Ga0207702_10014634 3300026078 Bacteria 6512
160 Ga0207641_10032914 3300026088 Bacteria 4306
161 Ga0207674_10000015 3300026116 Bacteria 183445
162 Ga0207674_10012775 3300026116 Bacteria 9379
163 Ga0207674_10090118 3300026116 Bacteria 3058
164 Ga0207698_10017806 3300026142 Bacteria 4828
165 Ga0209813_10000001 3300027866 Bacteria 280406
166 Ga0207428_10215571 3300027907 Unclassified 1441
167 Ga0268265_10049940 3300028380 Bacteria 3149
168 Ga0268264_10097220 3300028381 Bacteria 2552
169 Ga0265337_1000078 3300028556 Bacteria 46208
170 Ga0265337_1000158 3300028556 Bacteria 34604
171 Ga0265337_1001982 3300028556 Bacteria 9729
172 Ga0265337_1002139 3300028556 Bacteria 9307
173 Ga0265326_10000323 3300028558 Bacteria 20556
174 Ga0265326_10005891 3300028558 Bacteria 3841
175 Ga0265326_10012652 3300028558 Bacteria 2477
176 Ga0265326_10022803 3300028558 Unclassified 1791
177 Ga0265319_1008820 3300028563 Bacteria 4371
178 Ga0265334_10005521 3300028573 Bacteria 5524
179 Ga0265334_10005958 3300028573 Bacteria 5303
180 Ga0265334_10006439 3300028573 Bacteria 5055
181 Ga0265334_10015657 3300028573 Unclassified 3147
182 Ga0265323_10021457 3300028653 Bacteria 2473
183 Ga0265322_10002201 3300028654 Bacteria 6059
184 Ga0265322_10002993 3300028654 Bacteria 5144
185 Ga0265322_10005489 3300028654 Bacteria 3752
186 Ga0265322_10007640 3300028654 Bacteria 3152
187 Ga0265336_10000020 3300028666 Bacteria 213480
188 Ga0265336_10000978 3300028666 Bacteria 14094
189 Ga0265336_10006125 3300028666 Bacteria 4361
190 Ga0265338_10000039 3300028800 Bacteria 236135
191 Ga0265338_10000074 3300028800 Bacteria 181183
192 Ga0265338_10000313 3300028800 Bacteria 87846
193 Ga0265338_10000969 3300028800 Bacteria 48318
194 Ga0265338_10001857 3300028800 Bacteria 33176
195 Ga0265338_10002114 3300028800 Bacteria 30617
196 Ga0265338_10022684 3300028800 Bacteria 6483
197 Ga0265338_10038551 3300028800 Bacteria 4524
198 Ga0265338_10050673 3300028800 Bacteria 3749
199 Ga0265338_10105299 3300028800 Unclassified 2286
200 Ga0265338_10127922 3300028800 Bacteria 2012
201 Ga0265338_10141602 3300028800 Bacteria 1883
202 Ga0265338_10159101 3300028800 Bacteria 1746
203 Ga0265338_10472302 3300028800 Unclassified 886
204 Ga0265324_10009135 3300029957 Bacteria 3889
205 Ga0265324_10020376 3300029957 Bacteria 2383
206 Ga0265324_10022703 3300029957 Bacteria 2241
207 Ga0265324_10035554 3300029957 Bacteria 1734
208 Ga0265324_10036041 3300029957 Bacteria 1721
209 Ga0265330_10007148 3300031235 Bacteria 5469
210 Ga0265332_10005527 3300031238 Bacteria 5823
211 Ga0265328_10009926 3300031239 Bacteria 3851
212 Ga0265320_10003947 3300031240 Bacteria 9791
213 Ga0265320_10006044 3300031240 Bacteria 7683
214 Ga0265320_10062493 3300031240 Bacteria 1774
215 Ga0265325_10013135 3300031241 Bacteria 4719
216 Ga0265325_10043988 3300031241 Bacteria 2327
217 Ga0265325_10080208 3300031241 Bacteria 1623
218 Ga0265329_10018137 3300031242 Unclassified 2410
219 Ga0265340_10007744 3300031247 Bacteria 5824
220 Ga0265339_10016861 3300031249 Bacteria 4341
221 Ga0265339_10027409 3300031249 Unclassified 3252
222 Ga0265339_10040623 3300031249 Bacteria 2584
223 Ga0265331_10009816 3300031250 Bacteria 5339
224 Ga0265327_10000025 3300031251 Bacteria 380054
225 Ga0265327_10004349 3300031251 Bacteria 12608
226 Ga0265327_10010807 3300031251 Bacteria 6365
227 Ga0265327_10036452 3300031251 Bacteria 2703
228 Ga0265327_10097549 3300031251 Bacteria 1423
229 Ga0265316_10031419 3300031344 Bacteria 4341
230 Ga0265316_10037913 3300031344 Unclassified 3886
231 Ga0265316_10057515 3300031344 Bacteria 3032
232 Ga0265313_10038217 3300031595 Bacteria 2392
233 Ga0265314_10034327 3300031711 Bacteria 3709
234 Ga0265314_10060846 3300031711 Bacteria 2575
235 Ga0395899_0195215 3300037312 Unclassified 1415
236 Ga0395899_0333973 3300037312 Unclassified 1018
237 Ga0395900_0009355 3300037418 Bacteria 10047
238 Ga0395900_0059007 3300037418 Bacteria 3950
239 Ga0395898_0013366 3300037466 Bacteria 8456
240 Ga0395905_0006494 3300037471 Bacteria 11763
241 Ga0495629_0108258 3300046459 Bacteria 1938
242 Ga0495662_0044831 3300046476 Bacteria 2135
243 Ga0495583_0167079 3300046506 Bacteria 905
244 Ga0495622_0000049 3300046557 Bacteria 108606
245 Ga0495634_0425496 3300046642 Unclassified 786
246 Ga0495588_0000271 3300046674 Bacteria 39588
247 Ga0495647_0105686 3300046681 Bacteria 1170
248 Ga0495658_0005179 3300046683 Bacteria 6410
249 Ga0495593_0037195 3300047673 Bacteria 2635
250 Ga0495602_0172933 3300048088 Bacteria 1675
251 Ga0501032_0036878 3300049569 Bacteria 3336
252 Ga0501033_0069557 3300049570 Bacteria 2587
253 Ga0501034_0000982 3300049571 Bacteria 40974
254 Ga0501036_0015581 3300049572 Bacteria 6350
255 Ga0501046_0220624 3300049580 Bacteria 1403
256 Ga0501047_0000057 3300049581 Bacteria 140059
257 Ga0501048_0025477 3300049582 Bacteria 4310
258 Ga0501069_0172976 3300049585 Bacteria 1246
259 Ga0501073_0149206 3300049589 Unclassified 1620
260 Ga0501073_0228799 3300049589 Bacteria 1284
261 Ga0501074_0160697 3300049590 Bacteria 1605
262 Ga0501080_0000114 3300049742 Bacteria 55765
263 Ga0501083_0006455 3300049744 Bacteria 8319
264 Ga0501083_0011883 3300049744 Bacteria 6101
265 Ga0501276_003080 3300049773 Bacteria 1198
266 Ga0501035_0000005 3300049822 Bacteria 392980
267 Ga0501044_0021956 3300049823 Bacteria 6806
268 nmdc:mga03683_698_c1 3300050489 Bacteria 4704
269 nmdc:mga03n38_38_c1 3300050490 Bacteria 28445
270 nmdc:mga00v17_44113_c1 3300050491 Bacteria 2688
271 nmdc:mga00v17_6115_c1 3300050491 Bacteria 6374
272 nmdc:mga0yw44_10086_c1 3300050492 Bacteria 4809
273 nmdc:mga0yw44_1791_c1 3300050492 Bacteria 8762
274 nmdc:mga0yw44_8_c1 3300050492 Bacteria 237802
275 nmdc:mga0k408_10_c3 3300050493 Bacteria 47011
276 nmdc:mga0k408_1150_c1 3300050493 Bacteria 14463
277 nmdc:mga0k408_34194_c1 3300050493 Bacteria 1423
278 nmdc:mga06z11_241_c1 3300050494 Bacteria 21334
279 nmdc:mga04h51_1_c1 3300050495 Bacteria 273320
280 nmdc:mga07m45_94673_c1 3300050496 Bacteria 1713
281 nmdc:mga0qj67_75173_c1 3300050509 Bacteria 2700
282 nmdc:mga08y16_2520_c1 3300050511 Bacteria 18819
283 nmdc:mga0sz30_2_c1 3300050516 Bacteria 626403
284 Ga0500643_000022 3300053087 Bacteria 277519
285 Ga0500643_000320 3300053087 Bacteria 38673
286 Ga0500644_0001132 3300053088 Bacteria 7791
287 Ga0500644_0016488 3300053088 Bacteria 2128
288 Ga0500646_0000117 3300053090 Bacteria 22464
289 Ga0500583_0017535 3300053092 Unclassified 2887
290 Ga0500566_0000001 3300053094 Bacteria 1101031
291 Ga0500650_0000001 3300053098 Bacteria 818797
292 Ga0500555_000001 3300053103 Bacteria 1353713
293 Ga0500555_008130 3300053103 Bacteria 2988
294 Ga0500555_081975 3300053103 Bacteria 838
295 Ga0500562_004849 3300053108 Bacteria 3388
296 Ga0500593_000001 3300053117 Bacteria 784404
297 Ga0500594_0000001 3300053118 Bacteria 1178472
298 Ga0500594_0002422 3300053118 Bacteria 4059
299 Ga0500614_000001 3300053123 Bacteria 1274484
300 Ga0500614_001146 3300053123 Bacteria 6518
301 Ga0500628_000008 3300053129 Bacteria 151664
302 Ga0500655_000536 3300053133 Bacteria 7614
303 Ga0500559_0043528 3300053136 Unclassified 1961
304 Ga0500561_0000001 3300053137 Bacteria 957685
305 Ga0500568_0029409 3300053139 Unclassified 2281
306 Ga0500577_0001169 3300053142 Bacteria 6708
307 Ga0500579_005072 3300053143 Bacteria 8063
308 Ga0500616_0000005 3300053153 Bacteria 961725
309 Ga0500633_0014197 3300053160 Unclassified 2254
310 Ga0500649_000005 3300053722 Bacteria 123143
311 Ga0500570_000004 3300053724 Bacteria 133101
312 Ga0500611_000233 3300053727 Bacteria 6386

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050491 nmdc:mga00v17_6115_c1 nmdc:mga00v17_6115_c1_800_1459 192
2 3300037418 Ga0395900_0059007 Ga0395900_0059007_1285_1938 217
3 3300037466 Ga0395898_0013366 Ga0395898_0013366_7715_8368 217
4 3300006186 Ga0075369_10000001 Ga0075369_10000001206 229
5 3300005367 Ga0070667_100000001 Ga0070667_100000001450 235
6 3300005843 Ga0068860_100115762 Ga0068860_1001157622 235
7 3300025986 Ga0207658_10000003 Ga0207658_10000003927 235
8 3300028381 Ga0268264_10097220 Ga0268264_100972202 235
9 3300005985 Ga0081539_10010188 Ga0081539_100101881 236
10 3300006038 Ga0075365_10048479 Ga0075365_100484792 236
11 3300006051 Ga0075364_10003582 Ga0075364_100035823 236
12 3300050489 nmdc:mga03683_698_c1 nmdc:mga03683_698_c1_1217_2008 236
13 3300050492 nmdc:mga0yw44_10086_c1 nmdc:mga0yw44_10086_c1_1247_2038 236
14 3300020610 Ga0154015_1354249 Ga0154015_13542491 238
15 3300046642 Ga0495634_0425496 Ga0495634_0425496_10_732 240
16 3300006051 Ga0075364_10010216 Ga0075364_100102164 242
17 3300053090 Ga0500646_0000117 Ga0500646_0000117_7576_8358 244
18 3300053092 Ga0500583_0017535 Ga0500583_0017535_402_1184 244
19 3300053098 Ga0500650_0000001 Ga0500650_0000001_255747_256529 244
20 3300053108 Ga0500562_004849 Ga0500562_004849_2434_3216 244
21 3300053118 Ga0500594_0000001 Ga0500594_0000001_926220_927002 244
22 3300053133 Ga0500655_000536 Ga0500655_000536_1377_2159 244
23 3300053142 Ga0500577_0001169 Ga0500577_0001169_1753_2535 244
24 3300053143 Ga0500579_005072 Ga0500579_005072_2946_3728 244
25 3300053160 Ga0500633_0014197 Ga0500633_0014197_1228_2010 244
26 3300013105 Ga0157369_10163884 Ga0157369_101638843 245
27 3300005458 Ga0070681_10518485 Ga0070681_105184852 248
28 3300009093 Ga0105240_10126610 Ga0105240_101266102 248
29 3300009553 Ga0105249_10671671 Ga0105249_106716712 248
30 3300028800 Ga0265338_10050673 Ga0265338_100506733 248
31 3300006195 Ga0075366_10000119 Ga0075366_1000011911 249
32 3300025921 Ga0207652_10085925 Ga0207652_100859252 249
33 3300050493 nmdc:mga0k408_1150_c1 nmdc:mga0k408_1150_c1_8109_8900 249
34 3300028800 Ga0265338_10000313 Ga0265338_100003134 250
35 3300031251 Ga0265327_10000025 Ga0265327_10000025328 251
36 3300049569 Ga0501032_0036878 Ga0501032_0036878_223_981 251
37 3300050493 nmdc:mga0k408_34194_c1 nmdc:mga0k408_34194_c1_568_1323 251
38 3300003320 rootH2_10315243 rootH2_103152432 252
39 3300005367 Ga0070667_100001450 Ga0070667_10000145021 252
40 3300005841 Ga0068863_100029265 Ga0068863_1000292654 252
41 3300013307 Ga0157372_10002740 Ga0157372_100027403 252
42 3300025927 Ga0207687_10000004 Ga0207687_10000004665 252
43 3300025972 Ga0207668_10299741 Ga0207668_102997412 252
44 3300026088 Ga0207641_10032914 Ga0207641_100329144 252
45 3300049589 Ga0501073_0149206 Ga0501073_0149206_831_1604 252
46 3300010375 Ga0105239_10006600 Ga0105239_100066008 254
47 3300049773 Ga0501276_003080 Ga0501276_003080_14_808 255
48 3300050492 nmdc:mga0yw44_1791_c1 nmdc:mga0yw44_1791_c1_1371_2138 255
49 3300006042 Ga0075368_10000005 Ga0075368_1000000539 256
50 3300006048 Ga0075363_100000008 Ga0075363_10000000841 256
51 3300006178 Ga0075367_10000013 Ga0075367_100000137 256
52 3300009174 Ga0105241_10326723 Ga0105241_103267232 256
53 3300009986 Ga0105033_100848 Ga0105033_1008482 256
54 3300009987 Ga0105030_100126 Ga0105030_1001263 256
55 3300013874 Ga0157514_134332 Ga0157514_1343322 256
56 3300027866 Ga0209813_10000001 Ga0209813_1000000181 256
57 3300050490 nmdc:mga03n38_38_c1 nmdc:mga03n38_38_c1_20734_21507 256
58 3300050494 nmdc:mga06z11_241_c1 nmdc:mga06z11_241_c1_9868_10641 256
59 3300050495 nmdc:mga04h51_1_c1 nmdc:mga04h51_1_c1_68852_69625 256
60 3300050496 nmdc:mga07m45_94673_c1 nmdc:mga07m45_94673_c1_291_1064 256
61 3300053087 Ga0500643_000320 Ga0500643_000320_23952_24725 256
62 3300053139 Ga0500568_0029409 Ga0500568_0029409_852_1625 256
63 3300005329 Ga0070683_100031422 Ga0070683_1000314223 257
64 3300005337 Ga0070682_100172760 Ga0070682_1001727602 257
65 3300005339 Ga0070660_100081238 Ga0070660_1000812382 257
66 3300005344 Ga0070661_100030829 Ga0070661_1000308292 257
67 3300005539 Ga0068853_100053070 Ga0068853_1000530702 257
68 3300005577 Ga0068857_100015425 Ga0068857_1000154255 257
69 3300005578 Ga0068854_100286996 Ga0068854_1002869962 257
70 3300005616 Ga0068852_100033882 Ga0068852_1000338823 257
71 3300009093 Ga0105240_10387645 Ga0105240_103876452 257
72 3300013104 Ga0157370_10196275 Ga0157370_101962752 257
73 3300013105 Ga0157369_10025107 Ga0157369_100251074 257
74 3300013307 Ga0157372_10062513 Ga0157372_100625132 257
75 3300025912 Ga0207707_10028981 Ga0207707_100289812 257
76 3300025913 Ga0207695_10032384 Ga0207695_100323845 257
77 3300025919 Ga0207657_10052701 Ga0207657_100527012 257
78 3300025921 Ga0207652_10007350 Ga0207652_100073506 257
79 3300025949 Ga0207667_10081315 Ga0207667_100813152 257
80 3300025981 Ga0207640_10173843 Ga0207640_101738432 257
81 3300026116 Ga0207674_10012775 Ga0207674_100127754 257
82 3300026142 Ga0207698_10017806 Ga0207698_100178063 257
83 3300037312 Ga0395899_0195215 Ga0395899_0195215_509_1300 257
84 3300037418 Ga0395900_0009355 Ga0395900_0009355_8276_9067 257
85 3300005435 Ga0070714_100000977 Ga0070714_10000097723 258
86 3300005544 Ga0070686_100153803 Ga0070686_1001538032 258
87 3300013105 Ga0157369_10039649 Ga0157369_100396494 258
88 3300025904 Ga0207647_10006638 Ga0207647_100066384 258
89 3300025929 Ga0207664_10001341 Ga0207664_1000134110 258
90 3300028556 Ga0265337_1002139 Ga0265337_10021396 258
91 3300037312 Ga0395899_0333973 Ga0395899_0333973_44_820 258
92 3300049590 Ga0501074_0160697 Ga0501074_0160697_113_889 258
93 3300005329 Ga0070683_100022194 Ga0070683_1000221943 259
94 3300005335 Ga0070666_10044897 Ga0070666_100448973 259
95 3300005336 Ga0070680_100007511 Ga0070680_1000075113 259
96 3300005337 Ga0070682_100003887 Ga0070682_1000038872 259
97 3300005339 Ga0070660_100000121 Ga0070660_10000012142 259
98 3300005436 Ga0070713_100105394 Ga0070713_1001053942 259
99 3300005530 Ga0070679_100000721 Ga0070679_10000072111 259
100 3300005563 Ga0068855_100000413 Ga0068855_10000041340 259
101 3300005563 Ga0068855_100006404 Ga0068855_1000064042 259
102 3300005563 Ga0068855_100339699 Ga0068855_1003396992 259
103 3300005577 Ga0068857_100000012 Ga0068857_10000001227 259
104 3300009094 Ga0111539_10002334 Ga0111539_1000233425 259
105 3300009101 Ga0105247_10127628 Ga0105247_101276282 259
106 3300009551 Ga0105238_10106083 Ga0105238_101060832 259
107 3300013100 Ga0157373_10309405 Ga0157373_103094052 259
108 3300025903 Ga0207680_10032630 Ga0207680_100326302 259
109 3300025911 Ga0207654_10344523 Ga0207654_103445231 259
110 3300025912 Ga0207707_10004970 Ga0207707_100049705 259
111 3300025913 Ga0207695_10156522 Ga0207695_101565222 259
112 3300025921 Ga0207652_10000874 Ga0207652_1000087423 259
113 3300025944 Ga0207661_10038031 Ga0207661_100380312 259
114 3300025949 Ga0207667_10026396 Ga0207667_100263962 259
115 3300025949 Ga0207667_10295143 Ga0207667_102951432 259
116 3300025972 Ga0207668_10159118 Ga0207668_101591182 259
117 3300026116 Ga0207674_10000015 Ga0207674_1000001550 259
118 3300027907 Ga0207428_10215571 Ga0207428_102155712 259
119 3300028556 Ga0265337_1000158 Ga0265337_100015826 259
120 3300028556 Ga0265337_1001982 Ga0265337_10019827 259
121 3300028558 Ga0265326_10000323 Ga0265326_100003238 259
122 3300028558 Ga0265326_10005891 Ga0265326_100058912 259
123 3300028558 Ga0265326_10012652 Ga0265326_100126522 259
124 3300028563 Ga0265319_1008820 Ga0265319_10088202 259
125 3300028573 Ga0265334_10005521 Ga0265334_100055212 259
126 3300028573 Ga0265334_10005958 Ga0265334_100059584 259
127 3300028573 Ga0265334_10006439 Ga0265334_100064394 259
128 3300028573 Ga0265334_10015657 Ga0265334_100156572 259
129 3300028653 Ga0265323_10021457 Ga0265323_100214572 259
130 3300028654 Ga0265322_10002201 Ga0265322_100022013 259
131 3300028654 Ga0265322_10002993 Ga0265322_100029932 259
132 3300028654 Ga0265322_10005489 Ga0265322_100054892 259
133 3300028654 Ga0265322_10007640 Ga0265322_100076402 259
134 3300028666 Ga0265336_10000020 Ga0265336_100000209 259
135 3300028666 Ga0265336_10000978 Ga0265336_1000097813 259
136 3300028666 Ga0265336_10006125 Ga0265336_100061253 259
137 3300028800 Ga0265338_10000039 Ga0265338_1000003952 259
138 3300028800 Ga0265338_10000074 Ga0265338_10000074197 259
139 3300028800 Ga0265338_10000969 Ga0265338_1000096945 259
140 3300028800 Ga0265338_10002114 Ga0265338_1000211423 259
141 3300028800 Ga0265338_10022684 Ga0265338_100226843 259
142 3300028800 Ga0265338_10038551 Ga0265338_100385514 259
143 3300028800 Ga0265338_10105299 Ga0265338_101052992 259
144 3300028800 Ga0265338_10141602 Ga0265338_101416022 259
145 3300029957 Ga0265324_10009135 Ga0265324_100091353 259
146 3300029957 Ga0265324_10020376 Ga0265324_100203763 259
147 3300029957 Ga0265324_10022703 Ga0265324_100227032 259
148 3300029957 Ga0265324_10035554 Ga0265324_100355542 259
149 3300029957 Ga0265324_10036041 Ga0265324_100360412 259
150 3300031235 Ga0265330_10007148 Ga0265330_100071485 259
151 3300031238 Ga0265332_10005527 Ga0265332_100055274 259
152 3300031239 Ga0265328_10009926 Ga0265328_100099263 259
153 3300031240 Ga0265320_10006044 Ga0265320_100060442 259
154 3300031240 Ga0265320_10062493 Ga0265320_100624932 259
155 3300031241 Ga0265325_10013135 Ga0265325_100131353 259
156 3300031241 Ga0265325_10043988 Ga0265325_100439881 259
157 3300031241 Ga0265325_10080208 Ga0265325_100802082 259
158 3300031242 Ga0265329_10018137 Ga0265329_100181372 259
159 3300031247 Ga0265340_10007744 Ga0265340_100077443 259
160 3300031249 Ga0265339_10016861 Ga0265339_100168613 259
161 3300031249 Ga0265339_10027409 Ga0265339_100274092 259
162 3300031249 Ga0265339_10040623 Ga0265339_100406232 259
163 3300031250 Ga0265331_10009816 Ga0265331_100098163 259
164 3300031251 Ga0265327_10036452 Ga0265327_100364521 259
165 3300031251 Ga0265327_10097549 Ga0265327_100975492 259
166 3300031344 Ga0265316_10031419 Ga0265316_100314193 259
167 3300031344 Ga0265316_10037913 Ga0265316_100379133 259
168 3300031344 Ga0265316_10057515 Ga0265316_100575154 259
169 3300031595 Ga0265313_10038217 Ga0265313_100382172 259
170 3300031711 Ga0265314_10060846 Ga0265314_100608462 259
171 3300049589 Ga0501073_0228799 Ga0501073_0228799_167_949 259
172 3300050511 nmdc:mga08y16_2520_c1 nmdc:mga08y16_2520_c1_14996_15775 259
173 3300053103 Ga0500555_000001 Ga0500555_000001_424132_424911 259
174 3300005347 Ga0070668_100032538 Ga0070668_1000325382 260
175 3300005347 Ga0070668_100188262 Ga0070668_1001882622 260
176 3300005366 Ga0070659_100227339 Ga0070659_1002273392 260
177 3300005458 Ga0070681_10069066 Ga0070681_100690661 260
178 3300005547 Ga0070693_100027400 Ga0070693_1000274002 260
179 3300005563 Ga0068855_100064674 Ga0068855_1000646743 260
180 3300005577 Ga0068857_100701908 Ga0068857_1007019081 260
181 3300005617 Ga0068859_100474641 Ga0068859_1004746412 260
182 3300005842 Ga0068858_100161906 Ga0068858_1001619062 260
183 3300005844 Ga0068862_100113954 Ga0068862_1001139542 260
184 3300006931 Ga0097620_100474578 Ga0097620_1004745782 260
185 3300009174 Ga0105241_10002636 Ga0105241_1000263610 260
186 3300009174 Ga0105241_10026451 Ga0105241_100264512 260
187 3300009551 Ga0105238_10349354 Ga0105238_103493542 260
188 3300009553 Ga0105249_10421318 Ga0105249_104213182 260
189 3300013105 Ga0157369_10476739 Ga0157369_104767392 260
190 3300013307 Ga0157372_10245980 Ga0157372_102459802 260
191 3300014325 Ga0163163_10012017 Ga0163163_100120177 260
192 3300014325 Ga0163163_10026941 Ga0163163_100269413 260
193 3300025911 Ga0207654_10001112 Ga0207654_100011125 260
194 3300025949 Ga0207667_10053184 Ga0207667_100531843 260
195 3300026035 Ga0207703_10012402 Ga0207703_100124025 260
196 3300026035 Ga0207703_10383108 Ga0207703_103831082 260
197 3300026116 Ga0207674_10090118 Ga0207674_100901182 260
198 3300028380 Ga0268265_10049940 Ga0268265_100499402 260
199 3300028558 Ga0265326_10022803 Ga0265326_100228032 260
200 3300031251 Ga0265327_10010807 Ga0265327_100108071 260
201 3300031711 Ga0265314_10034327 Ga0265314_100343273 260
202 3300037471 Ga0395905_0006494 Ga0395905_0006494_9405_10187 260
203 3300053087 Ga0500643_000022 Ga0500643_000022_221879_222676 260
204 3300053088 Ga0500644_0016488 Ga0500644_0016488_1013_1795 260
205 3300053153 Ga0500616_0000005 Ga0500616_0000005_161063_161860 260
206 3300005336 Ga0070680_100004159 Ga0070680_1000041599 261
207 3300005336 Ga0070680_100223569 Ga0070680_1002235692 261
208 3300005458 Ga0070681_10067773 Ga0070681_100677733 261
209 3300005530 Ga0070679_100006848 Ga0070679_1000068482 261
210 3300005530 Ga0070679_100313053 Ga0070679_1003130532 261
211 3300006844 Ga0075428_100003597 Ga0075428_10000359711 261
212 3300006846 Ga0075430_100085992 Ga0075430_1000859923 261
213 3300009093 Ga0105240_10543014 Ga0105240_105430142 261
214 3300009551 Ga0105238_10000350 Ga0105238_1000035037 261
215 3300013297 Ga0157378_10604014 Ga0157378_106040142 261
216 3300014326 Ga0157380_10117596 Ga0157380_101175962 261
217 3300025912 Ga0207707_10161216 Ga0207707_101612162 261
218 3300025913 Ga0207695_10455986 Ga0207695_104559862 261
219 3300025917 Ga0207660_10499827 Ga0207660_104998271 261
220 3300025919 Ga0207657_10011989 Ga0207657_100119892 261
221 3300025921 Ga0207652_10020165 Ga0207652_100201654 261
222 3300025921 Ga0207652_10050850 Ga0207652_100508503 261
223 3300025924 Ga0207694_10001075 Ga0207694_1000107530 261
224 3300025949 Ga0207667_10000196 Ga0207667_1000019690 261
225 3300028556 Ga0265337_1000078 Ga0265337_100007850 261
226 3300028800 Ga0265338_10001857 Ga0265338_100018574 261
227 3300028800 Ga0265338_10159101 Ga0265338_101591012 261
228 3300028800 Ga0265338_10472302 Ga0265338_104723021 261
229 3300031240 Ga0265320_10003947 Ga0265320_100039475 261
230 3300046506 Ga0495583_0167079 Ga0495583_0167079_92_877 261
231 3300050509 nmdc:mga0qj67_75173_c1 nmdc:mga0qj67_75173_c1_1498_2289 261
232 3300050516 nmdc:mga0sz30_2_c1 nmdc:mga0sz30_2_c1_533653_534438 261
233 3300053088 Ga0500644_0001132 Ga0500644_0001132_1579_2364 261
234 3300053103 Ga0500555_081975 Ga0500555_081975_17_802 261
235 3300053727 Ga0500611_000233 Ga0500611_000233_5305_6090 261
236 3300005563 Ga0068855_100000001 Ga0068855_100000001298 262
237 3300009174 Ga0105241_10000003 Ga0105241_10000003606 262
238 3300013105 Ga0157369_10000048 Ga0157369_1000004884 262
239 3300025911 Ga0207654_10000002 Ga0207654_10000002601 262
240 3300025949 Ga0207667_10000003 Ga0207667_10000003291 262
241 3300028800 Ga0265338_10127922 Ga0265338_101279222 262
242 3300049580 Ga0501046_0220624 Ga0501046_0220624_221_1009 262
243 3300049744 Ga0501083_0006455 Ga0501083_0006455_3272_4063 262
244 3300053117 Ga0500593_000001 Ga0500593_000001_756410_757198 262
245 3300053724 Ga0500570_000004 Ga0500570_000004_86498_87310 262
246 3300003316 rootH1_10128918 rootH1_101289182 263
247 3300005327 Ga0070658_10000724 Ga0070658_1000072410 263
248 3300005329 Ga0070683_100103646 Ga0070683_1001036464 263
249 3300005341 Ga0070691_10000836 Ga0070691_100008369 263
250 3300005366 Ga0070659_100000287 Ga0070659_10000028723 263
251 3300005530 Ga0070679_100249074 Ga0070679_1002490742 263
252 3300005530 Ga0070679_100387389 Ga0070679_1003873891 263
253 3300005535 Ga0070684_100814040 Ga0070684_1008140401 263
254 3300005539 Ga0068853_100023113 Ga0068853_1000231133 263
255 3300006038 Ga0075365_10000058 Ga0075365_1000005839 263
256 3300009098 Ga0105245_10000001 Ga0105245_10000001606 263
257 3300009551 Ga0105238_10284785 Ga0105238_102847852 263
258 3300009553 Ga0105249_10003149 Ga0105249_1000314910 263
259 3300009987 Ga0105030_100708 Ga0105030_1007082 263
260 3300013307 Ga0157372_10248870 Ga0157372_102488702 263
261 3300025909 Ga0207705_10000011 Ga0207705_1000001159 263
262 3300025909 Ga0207705_10002502 Ga0207705_100025028 263
263 3300025919 Ga0207657_10000772 Ga0207657_1000077228 263
264 3300025921 Ga0207652_10089024 Ga0207652_100890242 263
265 3300025927 Ga0207687_10000001 Ga0207687_10000001168 263
266 3300025932 Ga0207690_10000870 Ga0207690_1000087018 263
267 3300025949 Ga0207667_10000060 Ga0207667_1000006018 263
268 3300026041 Ga0207639_10016675 Ga0207639_100166753 263
269 3300031251 Ga0265327_10004349 Ga0265327_100043499 263
270 3300046459 Ga0495629_0108258 Ga0495629_0108258_232_1023 263
271 3300046476 Ga0495662_0044831 Ga0495662_0044831_1083_1874 263
272 3300046557 Ga0495622_0000049 Ga0495622_0000049_3527_4318 263
273 3300046681 Ga0495647_0105686 Ga0495647_0105686_297_1088 263
274 3300046683 Ga0495658_0005179 Ga0495658_0005179_4879_5670 263
275 3300047673 Ga0495593_0037195 Ga0495593_0037195_401_1192 263
276 3300048088 Ga0495602_0172933 Ga0495602_0172933_599_1390 263
277 3300049570 Ga0501033_0069557 Ga0501033_0069557_909_1703 263
278 3300049571 Ga0501034_0000982 Ga0501034_0000982_13828_14622 263
279 3300049572 Ga0501036_0015581 Ga0501036_0015581_5088_5882 263
280 3300049581 Ga0501047_0000057 Ga0501047_0000057_60352_61146 263
281 3300049582 Ga0501048_0025477 Ga0501048_0025477_1435_2229 263
282 3300049585 Ga0501069_0172976 Ga0501069_0172976_377_1183 263
283 3300049742 Ga0501080_0000114 Ga0501080_0000114_46605_47411 263
284 3300049744 Ga0501083_0011883 Ga0501083_0011883_2984_3778 263
285 3300049822 Ga0501035_0000005 Ga0501035_0000005_324956_325750 263
286 3300049823 Ga0501044_0021956 Ga0501044_0021956_1600_2394 263
287 3300050491 nmdc:mga00v17_44113_c1 nmdc:mga00v17_44113_c1_553_1344 263
288 3300050492 nmdc:mga0yw44_8_c1 nmdc:mga0yw44_8_c1_156713_157504 263
289 3300053094 Ga0500566_0000001 Ga0500566_0000001_377359_378150 263
290 3300053103 Ga0500555_008130 Ga0500555_008130_956_1750 263
291 3300053123 Ga0500614_001146 Ga0500614_001146_1565_2356 263
292 3300053136 Ga0500559_0043528 Ga0500559_0043528_661_1452 263
293 3300053137 Ga0500561_0000001 Ga0500561_0000001_929419_930210 263
294 3300001915 JGI24741J21665_1001186 JGI24741J21665_10011862 264
295 3300001979 JGI24740J21852_10013870 JGI24740J21852_100138703 264
296 3300001990 JGI24737J22298_10000039 JGI24737J22298_100000399 264
297 3300002067 JGI24735J21928_10000018 JGI24735J21928_1000001840 264
298 3300003320 rootH2_10000244 rootH2_10000244695 264
299 3300005563 Ga0068855_100031453 Ga0068855_1000314533 264
300 3300009098 Ga0105245_10330518 Ga0105245_103305181 264
301 3300009148 Ga0105243_10005455 Ga0105243_100054555 264
302 3300009174 Ga0105241_10658951 Ga0105241_106589512 264
303 3300013102 Ga0157371_10013518 Ga0157371_100135181 264
304 3300014968 Ga0157379_10000952 Ga0157379_1000095222 264
305 3300025949 Ga0207667_10201030 Ga0207667_102010302 264
306 3300026078 Ga0207702_10014634 Ga0207702_100146346 264
307 3300046674 Ga0495588_0000271 Ga0495588_0000271_11116_11910 264
308 3300050493 nmdc:mga0k408_10_c3 nmdc:mga0k408_10_c3_2966_3763 264
309 3300053118 Ga0500594_0002422 Ga0500594_0002422_2381_3175 264
310 3300053123 Ga0500614_000001 Ga0500614_000001_640876_641670 264
311 3300053129 Ga0500628_000008 Ga0500628_000008_70255_71049 264
312 3300053722 Ga0500649_000005 Ga0500649_000005_116071_116865 264

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00121

TIM

Triosephosphate isomerase

32

279

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6nlh-assembly1.cif.gz_E structure of human triose phosphate isomerase r189a 0.9641 4 251
6nlh-assembly4.cif.gz_H structure of human triose phosphate isomerase r189a 0.9629 4 251
4y8f-assembly1.cif.gz_A-2 crystal structure of triosephosphate isomerase from clostridium perfringens 0.9609 3 250
1sw3-assembly1.cif.gz_B triosephosphate isomerase from gallus gallus, loop 6 mutant t175v 0.9587 3 252
7sx1-assembly1.cif.gz_A human triosephosphate isomerase mutant v154m 0.958 3 252
ID Description Score Start End Superfamily
af_P17751_41_299_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9576 42 252 3.20.20.70
4y96A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.954 2 252 3.20.20.70
af_P0A858_1_255_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9522 3 257 3.20.20.70
4y90A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9505 4 251 3.20.20.70
af_Q4DV43_1_251_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9499 1 251 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7W4E7E2-F1-model_v4 Triosephosphate isomerase (TIM) (TPI) (EC 5.3.1.1) (Triose-phosphate isomerase) 0.9842 3 256 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-A0A7T9ISC5-F1-model_v4 deleted 0.9842 13 261
AF-A0A357CUB6-F1-model_v4 Triosephosphate isomerase (EC 5.3.1.1) 0.9803 88 216 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-A0A645F5D4-F1-model_v4 Triosephosphate isomerase (EC 5.3.1.1) 0.9772 89 251 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-A0A7W4DH29-F1-model_v4 Triosephosphate isomerase (TIM) (TPI) (EC 5.3.1.1) (Triose-phosphate isomerase) 0.9771 4 256 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166

Feature Viewer

pLDDT pTM Quality
91.61 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map