F401569

General Info

Members Datasets Scaffolds Average Seq Length
312 168 624 382

Family's Representative Sequence

Representative Sequence 3300005434|Ga0070709_10135176|Ga0070709_101351762
Length 420
Sequence MTPRASEASEPADRSGPRSPVPASDAVRGLRGAARLASQMTTPLPLFPVTTVGSWPRPPAVAAALRDVRRGRISRADFERQADAAIVELLRVQHALGCDLITDGELRRDNFYSFVATKLSGVRLMTLAEMLDVVEDKAGFERLLQTLDVPAYSISSPICTGPIARREPLTVDDLRFVRRHSDKPVKVTVPGPYLLTRAMFVPELTRAHYLTKEALAEDVVALLRAEVDELVAEGVDFVQFDEPVLTEVAFAPAKTRTFMCAALAARNDPVEELELAISLINRVVDGVTGTRTGVHVCRGNWSRDETTLLSGGYAPLAPFLERMEVSQLVLEHATDRAGSVMRFDGKELGMGVVNPRTDAVESPAQIRSAIERALKFYEPREIFLNPDCGFGTFSNRPMNSWEIASAKIAAMVSAARDLRS

Samples

Sample ID Description Type Environment
1 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
49 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
50 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
51 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
52 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
53 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
54 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
60 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
67 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
79 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
114 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
117 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
118 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
119 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
123 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
124 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
130 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
146 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
151 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
154 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
158 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300059491 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 12R_AW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
161 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
162 3300059630 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 165R_SD_T3_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
163 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
166 2738541295 Bacillus sp. OK085 Isolate Unclassified
167 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
168 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.12
Metatranscriptomes 1.92
Isolates 0.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.17
Nodule 0
Rhizoplane 1.6
Rhizosphere 93.91
Stem 0
Stem Tuber 0
Unclassified 10.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070709_10135176 3300005434 Bacteria 1688
2 MRS1b_contig_7139776 2162886011 Unclassified 1984
3 JGI25405J52794_10005687 3300003911 Bacteria 2259
4 JGI25405J52794_10005786 3300003911 Bacteria 2243
5 Ga0065712_10069240 3300005290 Bacteria 7672
6 Ga0065712_10069383 3300005290 Bacteria 7391
7 Ga0070658_10000768 3300005327 Bacteria 27548
8 Ga0070676_10011587 3300005328 Bacteria 4796
9 Ga0070683_100000913 3300005329 Bacteria 21922
10 Ga0070690_100013859 3300005330 Unclassified 4777
11 Ga0070670_100015334 3300005331 Bacteria 6582
12 Ga0070670_100045566 3300005331 Bacteria 3771
13 Ga0070670_100057880 3300005331 Unclassified 3326
14 Ga0070677_10013470 3300005333 Bacteria 2860
15 Ga0068869_100008864 3300005334 Bacteria 6508
16 Ga0070666_10103675 3300005335 Unclassified 1963
17 Ga0070689_100000026 3300005340 Bacteria 100274
18 Ga0070689_100000300 3300005340 Bacteria 28818
19 Ga0070689_100002123 3300005340 Bacteria 12881
20 Ga0070689_100218157 3300005340 Bacteria 1564
21 Ga0070661_100008854 3300005344 Bacteria 6967
22 Ga0070669_100181163 3300005353 Bacteria 1648
23 Ga0070669_100211311 3300005353 Unclassified 1531
24 Ga0070675_100001616 3300005354 Bacteria 16600
25 Ga0070675_100200172 3300005354 Bacteria 1733
26 Ga0070674_100193016 3300005356 Bacteria 1568
27 Ga0070673_100075696 3300005364 Bacteria 2716
28 Ga0070688_100002887 3300005365 Bacteria 8765
29 Ga0070688_100022413 3300005365 Bacteria 3701
30 Ga0070659_100248542 3300005366 Bacteria 1473
31 Ga0070701_10059084 3300005438 Bacteria 2014
32 Ga0070694_100209853 3300005444 Bacteria 1456
33 Ga0070708_100111306 3300005445 Bacteria 2517
34 Ga0070708_100263789 3300005445 Bacteria 1619
35 Ga0070662_100073050 3300005457 Unclassified 2534
36 Ga0068867_100041736 3300005459 Unclassified 3353
37 Ga0070706_100061400 3300005467 Bacteria 3471
38 Ga0070706_100308123 3300005467 Unclassified 1477
39 Ga0070707_100000019 3300005468 Bacteria 132161
40 Ga0070707_100012879 3300005468 Archaea 7812
41 Ga0070707_100017270 3300005468 Bacteria 6782
42 Ga0070707_100029989 3300005468 Bacteria 5176
43 Ga0070698_100045649 3300005471 Bacteria 4484
44 Ga0070698_100181916 3300005471 Bacteria 2040
45 Ga0070698_100267816 3300005471 Unclassified 1640
46 Ga0070684_100000437 3300005535 Bacteria 28589
47 Ga0070697_100008563 3300005536 Archaea 7988
48 Ga0070672_100046328 3300005543 Unclassified 3369
49 Ga0070686_100022649 3300005544 Bacteria 3745
50 Ga0070695_100106254 3300005545 Unclassified 1898
51 Ga0070665_100399112 3300005548 Bacteria 1383
52 Ga0070704_100152195 3300005549 Bacteria 1820
53 Ga0068855_100029178 3300005563 Bacteria 6597
54 Ga0068855_100181781 3300005563 Bacteria 2377
55 Ga0068855_100357401 3300005563 Bacteria 1608
56 Ga0068855_100557460 3300005563 Bacteria 1240
57 Ga0070664_100000344 3300005564 Bacteria 34004
58 Ga0070664_100205814 3300005564 Bacteria 1757
59 Ga0068857_100163881 3300005577 Bacteria 2018
60 Ga0068856_100262922 3300005614 Bacteria 1741
61 Ga0070702_100106437 3300005615 Bacteria 1730
62 Ga0068859_100093213 3300005617 Bacteria 3063
63 Ga0068859_100310054 3300005617 Bacteria 1672
64 Ga0068870_10005044 3300005840 Bacteria 5735
65 Ga0068863_100238470 3300005841 Bacteria 1755
66 Ga0068858_100002559 3300005842 Bacteria 18329
67 Ga0068858_100106956 3300005842 Unclassified 2611
68 Ga0068860_100130207 3300005843 Bacteria 2414
69 Ga0068862_100020584 3300005844 Bacteria 5511
70 Ga0068862_100181950 3300005844 Bacteria 1887
71 Ga0081455_10001770 3300005937 Bacteria 26106
72 Ga0081455_10008901 3300005937 Bacteria 10380
73 Ga0081455_10052252 3300005937 Bacteria 3500
74 Ga0081538_10004561 3300005981 Bacteria 12749
75 Ga0081538_10006932 3300005981 Bacteria 9857
76 Ga0081538_10012604 3300005981 Bacteria 6770
77 Ga0081538_10013401 3300005981 Bacteria 6494
78 Ga0081538_10015771 3300005981 Bacteria 5831
79 Ga0081538_10018820 3300005981 Bacteria 5165
80 Ga0081538_10019713 3300005981 Bacteria 4995
81 Ga0081538_10021993 3300005981 Bacteria 4634
82 Ga0081538_10041268 3300005981 Bacteria 2931
83 Ga0081538_10064593 3300005981 Bacteria 2069
84 Ga0081538_10078399 3300005981 Bacteria 1773
85 Ga0081540_1009075 3300005983 Bacteria 6871
86 Ga0075364_10000629 3300006051 Bacteria 18191
87 Ga0075364_10004154 3300006051 Bacteria 8301
88 Ga0075364_10067024 3300006051 Bacteria 2359
89 Ga0075362_10041749 3300006177 Bacteria 2024
90 Ga0075367_10064124 3300006178 Bacteria 2197
91 Ga0075366_10022573 3300006195 Bacteria 3662
92 Ga0075366_10032170 3300006195 Bacteria 3088
93 Ga0075370_10002500 3300006353 Bacteria 8536
94 Ga0075428_100000049 3300006844 Bacteria 95188
95 Ga0075428_100000378 3300006844 Bacteria 44121
96 Ga0075428_100001721 3300006844 Bacteria 23390
97 Ga0075428_100004118 3300006844 Bacteria 16008
98 Ga0075428_100007109 3300006844 Bacteria 12394
99 Ga0075428_100012765 3300006844 Bacteria 9341
100 Ga0075428_100014489 3300006844 Bacteria 8756
101 Ga0075428_100025672 3300006844 Bacteria 6524
102 Ga0075428_100033357 3300006844 Bacteria 5685
103 Ga0075428_100059781 3300006844 Bacteria 4173
104 Ga0075428_100084763 3300006844 Bacteria 3457
105 Ga0075428_100310241 3300006844 Bacteria 1696
106 Ga0075430_100089213 3300006846 Bacteria 2580
107 Ga0075430_100103180 3300006846 Bacteria 2381
108 Ga0075430_100318978 3300006846 Bacteria 1284
109 Ga0075431_100006552 3300006847 Bacteria 11568
110 Ga0075431_100018517 3300006847 Bacteria 7094
111 Ga0075431_100028789 3300006847 Bacteria 5712
112 Ga0075431_100072283 3300006847 Bacteria 3559
113 Ga0075431_100075661 3300006847 Bacteria 3474
114 Ga0075431_100116089 3300006847 Bacteria 2763
115 Ga0075431_100146824 3300006847 Unclassified 2430
116 Ga0075431_100153127 3300006847 Bacteria 2373
117 Ga0075431_100157562 3300006847 Bacteria 2336
118 Ga0075433_10019910 3300006852 Bacteria 5602
119 Ga0075433_10037047 3300006852 Bacteria 4205
120 Ga0075433_10068498 3300006852 Bacteria 3116
121 Ga0075434_100005500 3300006871 Bacteria 11540
122 Ga0075429_100004512 3300006880 Bacteria 11980
123 Ga0075429_100006387 3300006880 Bacteria 10199
124 Ga0075429_100019065 3300006880 Bacteria 5943
125 Ga0075429_100021003 3300006880 Bacteria 5665
126 Ga0097620_100093222 3300006931 Bacteria 3063
127 Ga0097620_100310044 3300006931 Bacteria 1672
128 Ga0075435_100002707 3300007076 Bacteria 11826
129 Ga0099794_10062180 3300007265 Bacteria 1815
130 Ga0105240_10016839 3300009093 Bacteria 9879
131 Ga0105240_10192422 3300009093 Bacteria 2398
132 Ga0111539_10000316 3300009094 Bacteria 58954
133 Ga0111539_10031635 3300009094 Bacteria 6428
134 Ga0111539_10043702 3300009094 Bacteria 5371
135 Ga0111539_10052450 3300009094 Unclassified 4855
136 Ga0111539_10120723 3300009094 Unclassified 3071
137 Ga0111539_10159683 3300009094 Bacteria 2637
138 Ga0111539_10169560 3300009094 Bacteria 2550
139 Ga0111539_10239297 3300009094 Bacteria 2113
140 Ga0111539_10344785 3300009094 Bacteria 1734
141 Ga0111539_10358462 3300009094 Bacteria 1697
142 Ga0105247_10002686 3300009101 Bacteria 11951
143 Ga0114129_10017524 3300009147 Bacteria 10197
144 Ga0114129_10026784 3300009147 Bacteria 8163
145 Ga0114129_10129942 3300009147 Bacteria 3461
146 Ga0114129_10173344 3300009147 Bacteria 2939
147 Ga0114129_10235901 3300009147 Unclassified 2461
148 Ga0114129_10237035 3300009147 Bacteria 2454
149 Ga0114129_10253855 3300009147 Bacteria 2359
150 Ga0114129_10279730 3300009147 Unclassified 2230
151 Ga0105248_10042456 3300009177 Bacteria 5100
152 Ga0105248_10160806 3300009177 Bacteria 2533
153 Ga0105249_10037132 3300009553 Bacteria 4421
154 Ga0105249_10084665 3300009553 Bacteria 2953
155 Ga0105249_10096483 3300009553 Bacteria 2774
156 Ga0105239_10006459 3300010375 Bacteria 13601
157 Ga0105246_10127124 3300011119 Unclassified 1898
158 Ga0105246_10144196 3300011119 Unclassified 1795
159 Ga0157378_10112640 3300013297 Bacteria 2496
160 Ga0163162_10086931 3300013306 Bacteria 3204
161 Ga0163162_10231414 3300013306 Bacteria 1978
162 Ga0163162_10321420 3300013306 Bacteria 1680
163 Ga0163162_10369347 3300013306 Bacteria 1568
164 Ga0157375_10033294 3300013308 Bacteria 4895
165 Ga0157375_10202234 3300013308 Bacteria 2142
166 Ga0163163_10154041 3300014325 Bacteria 2342
167 Ga0157380_10005904 3300014326 Bacteria 8565
168 Ga0157380_10183724 3300014326 Unclassified 1839
169 Ga0157379_10025356 3300014968 Bacteria 5266
170 Ga0157379_10027008 3300014968 Bacteria 5109
171 Ga0206350_10987749 3300020080 Bacteria 1834
172 Ga0224712_10004361 3300022467 Unclassified 3808
173 Ga0207682_10004513 3300025893 Bacteria 5798
174 Ga0207680_10012378 3300025903 Bacteria 4343
175 Ga0207645_10026812 3300025907 Bacteria 3723
176 Ga0207643_10017982 3300025908 Unclassified 3871
177 Ga0207705_10011288 3300025909 Bacteria 6472
178 Ga0207684_10083828 3300025910 Bacteria 2715
179 Ga0207684_10171352 3300025910 Bacteria 1871
180 Ga0207695_10017321 3300025913 Bacteria 8388
181 Ga0207662_10120905 3300025918 Bacteria 1642
182 Ga0207649_10041607 3300025920 Unclassified 2797
183 Ga0207646_10000001 3300025922 Bacteria 1242027
184 Ga0207646_10000006 3300025922 Bacteria 510716
185 Ga0207646_10009872 3300025922 Bacteria 9395
186 Ga0207646_10017396 3300025922 Archaea 6728
187 Ga0207646_10072165 3300025922 Unclassified 3084
188 Ga0207646_10099948 3300025922 Bacteria 2600
189 Ga0207681_10280671 3300025923 Bacteria 1311
190 Ga0207650_10016507 3300025925 Bacteria 5163
191 Ga0207650_10018191 3300025925 Bacteria 4929
192 Ga0207650_10020997 3300025925 Bacteria 4613
193 Ga0207659_10002073 3300025926 Bacteria 11879
194 Ga0207687_10192488 3300025927 Bacteria 1588
195 Ga0207644_10051450 3300025931 Unclassified 2957
196 Ga0207706_10034648 3300025933 Bacteria 4491
197 Ga0207670_10000021 3300025936 Bacteria 155646
198 Ga0207670_10001776 3300025936 Bacteria 11291
199 Ga0207670_10125946 3300025936 Unclassified 1869
200 Ga0207711_10211213 3300025941 Bacteria 1773
201 Ga0207689_10032585 3300025942 Bacteria 4334
202 Ga0207689_10254316 3300025942 Bacteria 1453
203 Ga0207661_10004607 3300025944 Bacteria 9665
204 Ga0207679_10000879 3300025945 Bacteria 19184
205 Ga0207679_10013153 3300025945 Bacteria 5420
206 Ga0207667_10129724 3300025949 Bacteria 2596
207 Ga0207667_10237683 3300025949 Bacteria 1865
208 Ga0207651_10003635 3300025960 Bacteria 7604
209 Ga0207712_10027440 3300025961 Bacteria 3802
210 Ga0207712_10041977 3300025961 Bacteria 3147
211 Ga0207708_10042121 3300026075 Bacteria 3481
212 Ga0207702_10213437 3300026078 Bacteria 1795
213 Ga0207676_10075464 3300026095 Unclassified 2720
214 Ga0207675_100081818 3300026118 Bacteria 3028
215 Ga0209588_1000157 3300027671 Bacteria 19448
216 Ga0207428_10003303 3300027907 Bacteria 15688
217 Ga0207428_10016241 3300027907 Bacteria 6410
218 Ga0207428_10203447 3300027907 Bacteria 1489
219 Ga0268266_10312956 3300028379 Bacteria 1468
220 Ga0268265_10194848 3300028380 Bacteria 1753
221 Ga0268264_10124530 3300028381 Bacteria 2276
222 Ga0265316_10026460 3300031344 Unclassified 4824
223 Ga0307408_100121555 3300031548 Bacteria 2024
224 Ga0307410_10224675 3300031852 Bacteria 1446
225 Ga0307411_10056808 3300032005 Bacteria 2582
226 Ga0373949_0000282 3300035090 Bacteria 18715
227 Ga0373927_0109057 3300035695 Bacteria 1803
228 Ga0373933_0017779 3300035724 Bacteria 3990
229 Ga0373947_0076013 3300035725 Bacteria 2069
230 Ga0373937_0038604 3300036401 Bacteria 4351
231 Ga0373937_0063218 3300036401 Bacteria 3404
232 Ga0373925_0003301 3300037068 Bacteria 12540
233 Ga0373925_0085767 3300037068 Bacteria 2401
234 Ga0436362_0342673 3300039453 Bacteria 1746
235 Ga0453683_0002061 3300044673 Bacteria 16097
236 Ga0453684_0000054 3300044712 Bacteria 543775
237 Ga0453684_0063200 3300044712 Bacteria 4737
238 Ga0451576_0014609 3300045051 Bacteria 8727
239 Ga0451576_0021777 3300045051 Bacteria 6958
240 Ga0451576_0269495 3300045051 Bacteria 1780
241 Ga0495653_0061731 3300046463 Bacteria 2835
242 Ga0495628_0301721 3300046516 Bacteria 1185
243 Ga0495586_0042183 3300046535 Bacteria 2457
244 Ga0495667_0097480 3300046559 Bacteria 1904
245 Ga0495600_0042277 3300046809 Bacteria 2971
246 Ga0495636_0000247 3300047318 Bacteria 21523
247 Ga0495674_0097663 3300047319 Bacteria 2502
248 Ga0495680_0016648 3300047322 Bacteria 6309
249 Ga0495684_0106375 3300047471 Bacteria 2120
250 Ga0495684_0146920 3300047471 Bacteria 1765
251 Ga0495684_0181133 3300047471 Bacteria 1562
252 Ga0496104_0123888 3300048907 Unclassified 2481
253 Ga0496108_0005031 3300048911 Bacteria 10680
254 Ga0496109_0002987 3300048912 Bacteria 14127
255 Ga0496109_0124887 3300048912 Bacteria 2399
256 Ga0496110_0060217 3300048913 Unclassified 3347
257 Ga0501034_0115011 3300049571 Bacteria 2679
258 Ga0501039_0097171 3300049575 Bacteria 2297
259 Ga0501040_0079234 3300049576 Bacteria 2274
260 Ga0501040_0079892 3300049576 Bacteria 2265
261 Ga0501047_0085902 3300049581 Bacteria 3023
262 Ga0501071_0241633 3300049587 Bacteria 1362
263 Ga0501072_0146192 3300049588 Bacteria 1885
264 Ga0501076_0098480 3300049592 Bacteria 2356
265 Ga0501080_0226018 3300049742 Bacteria 1712
266 Ga0501045_0095433 3300049824 Bacteria 2200
267 nmdc:mga00v17_48902_c1 3300050491 Bacteria 2564
268 nmdc:mga00v17_49063_c1 3300050491 Bacteria 2560
269 nmdc:mga0k408_50967_c1 3300050493 Bacteria 2397
270 nmdc:mga07m45_4750_c2 3300050496 Bacteria 3054
271 nmdc:mga05p37_19516_c1 3300050507 Bacteria 8201
272 nmdc:mga05p37_21658_c1 3300050507 Bacteria 7787
273 nmdc:mga05p37_22358_c1 3300050507 Bacteria 7671
274 nmdc:mga09592_100459_c1 3300050508 Bacteria 2477
275 nmdc:mga09592_10220_c1 3300050508 Bacteria 7637
276 nmdc:mga09592_18353_c1 3300050508 Bacteria 5737
277 nmdc:mga09592_18841_c1 3300050508 Bacteria 5663
278 nmdc:mga09592_30514_c1 3300050508 Bacteria 4486
279 nmdc:mga09592_4872_c1 3300050508 Bacteria 10871
280 nmdc:mga0qj67_120718_c1 3300050509 Bacteria 2120
281 nmdc:mga0qj67_199867_c1 3300050509 Bacteria 1624
282 nmdc:mga0qj67_222497_c1 3300050509 Bacteria 1532
283 nmdc:mga0qj67_233947_c1 3300050509 Bacteria 1491
284 nmdc:mga06r32_112814_c2 3300050510 Bacteria 1373
285 nmdc:mga06r32_180649_c1 3300050510 Bacteria 2095
286 nmdc:mga06r32_184783_c1 3300050510 Bacteria 2071
287 nmdc:mga06r32_21227_c1 3300050510 Bacteria 5994
288 nmdc:mga06r32_402451_c1 3300050510 Bacteria 1351
289 nmdc:mga06r32_4910_c1 3300050510 Bacteria 12044
290 nmdc:mga08y16_144743_c1 3300050511 Unclassified 2470
291 nmdc:mga08y16_1979_c1 3300050511 Bacteria 20895
292 nmdc:mga08y16_24137_c1 3300050511 Bacteria 6420
293 nmdc:mga08y16_269339_c1 3300050511 Bacteria 1758
294 nmdc:mga08y16_3386_c1 3300050511 Bacteria 16526
295 nmdc:mga08y16_34471_c1 3300050511 Bacteria 5317
296 nmdc:mga08y16_62268_c1 3300050511 Bacteria 3896
297 nmdc:mga0a205_90600_c1 3300050515 Bacteria 2955
298 Ga0495619_0067834 3300053085 Bacteria 2382
299 Ga0500622_0098279 3300053156 Bacteria 1445
300 Ga0587070_007670 3300059491 Bacteria 1505
301 Ga0587088_006651 3300059508 Bacteria 1569
302 Ga0587128_001384 3300059630 Unclassified 2270
303 Ga0587107_002710 3300059652 Bacteria 1637
304 Ga0501082_0089999 3300060353 Bacteria 2650
305 Ga0501082_0169132 3300060353 Bacteria 1900
306 Ga0501082_0271516 3300060353 Bacteria 1476
307 Ga0530510_0032425 3300061734 Bacteria 3759
308 Ga0530510_0038701 3300061734 Bacteria 3444
309 Ga0530510_0124290 3300061734 Bacteria 1895
310 2738816898 2738541295 Bacteria 5730091
311 2831906365 2831905167 Bacteria 3319172
312 2964376499 2964375228 Bacteria 4909004
313 Ga0070709_10135176
314 MRS1b_contig_7139776
315 JGI25405J52794_10005687
316 JGI25405J52794_10005786
317 Ga0065712_10069240
318 Ga0065712_10069383
319 Ga0070658_10000768
320 Ga0070676_10011587
321 Ga0070683_100000913
322 Ga0070690_100013859
323 Ga0070670_100015334
324 Ga0070670_100045566
325 Ga0070670_100057880
326 Ga0070677_10013470
327 Ga0068869_100008864
328 Ga0070666_10103675
329 Ga0070689_100000026
330 Ga0070689_100000300
331 Ga0070689_100002123
332 Ga0070689_100218157
333 Ga0070661_100008854
334 Ga0070669_100181163
335 Ga0070669_100211311
336 Ga0070675_100001616
337 Ga0070675_100200172
338 Ga0070674_100193016
339 Ga0070673_100075696
340 Ga0070688_100002887
341 Ga0070688_100022413
342 Ga0070659_100248542
343 Ga0070701_10059084
344 Ga0070694_100209853
345 Ga0070708_100111306
346 Ga0070708_100263789
347 Ga0070662_100073050
348 Ga0068867_100041736
349 Ga0070706_100061400
350 Ga0070706_100308123
351 Ga0070707_100000019
352 Ga0070707_100012879
353 Ga0070707_100017270
354 Ga0070707_100029989
355 Ga0070698_100045649
356 Ga0070698_100181916
357 Ga0070698_100267816
358 Ga0070684_100000437
359 Ga0070697_100008563
360 Ga0070672_100046328
361 Ga0070686_100022649
362 Ga0070695_100106254
363 Ga0070665_100399112
364 Ga0070704_100152195
365 Ga0068855_100029178
366 Ga0068855_100181781
367 Ga0068855_100357401
368 Ga0068855_100557460
369 Ga0070664_100000344
370 Ga0070664_100205814
371 Ga0068857_100163881
372 Ga0068856_100262922
373 Ga0070702_100106437
374 Ga0068859_100093213
375 Ga0068859_100310054
376 Ga0068870_10005044
377 Ga0068863_100238470
378 Ga0068858_100002559
379 Ga0068858_100106956
380 Ga0068860_100130207
381 Ga0068862_100020584
382 Ga0068862_100181950
383 Ga0081455_10001770
384 Ga0081455_10008901
385 Ga0081455_10052252
386 Ga0081538_10004561
387 Ga0081538_10006932
388 Ga0081538_10012604
389 Ga0081538_10013401
390 Ga0081538_10015771
391 Ga0081538_10018820
392 Ga0081538_10019713
393 Ga0081538_10021993
394 Ga0081538_10041268
395 Ga0081538_10064593
396 Ga0081538_10078399
397 Ga0081540_1009075
398 Ga0075364_10000629
399 Ga0075364_10004154
400 Ga0075364_10067024
401 Ga0075362_10041749
402 Ga0075367_10064124
403 Ga0075366_10022573
404 Ga0075366_10032170
405 Ga0075370_10002500
406 Ga0075428_100000049
407 Ga0075428_100000378
408 Ga0075428_100001721
409 Ga0075428_100004118
410 Ga0075428_100007109
411 Ga0075428_100012765
412 Ga0075428_100014489
413 Ga0075428_100025672
414 Ga0075428_100033357
415 Ga0075428_100059781
416 Ga0075428_100084763
417 Ga0075428_100310241
418 Ga0075430_100089213
419 Ga0075430_100103180
420 Ga0075430_100318978
421 Ga0075431_100006552
422 Ga0075431_100018517
423 Ga0075431_100028789
424 Ga0075431_100072283
425 Ga0075431_100075661
426 Ga0075431_100116089
427 Ga0075431_100146824
428 Ga0075431_100153127
429 Ga0075431_100157562
430 Ga0075433_10019910
431 Ga0075433_10037047
432 Ga0075433_10068498
433 Ga0075434_100005500
434 Ga0075429_100004512
435 Ga0075429_100006387
436 Ga0075429_100019065
437 Ga0075429_100021003
438 Ga0097620_100093222
439 Ga0097620_100310044
440 Ga0075435_100002707
441 Ga0099794_10062180
442 Ga0105240_10016839
443 Ga0105240_10192422
444 Ga0111539_10000316
445 Ga0111539_10031635
446 Ga0111539_10043702
447 Ga0111539_10052450
448 Ga0111539_10120723
449 Ga0111539_10159683
450 Ga0111539_10169560
451 Ga0111539_10239297
452 Ga0111539_10344785
453 Ga0111539_10358462
454 Ga0105247_10002686
455 Ga0114129_10017524
456 Ga0114129_10026784
457 Ga0114129_10129942
458 Ga0114129_10173344
459 Ga0114129_10235901
460 Ga0114129_10237035
461 Ga0114129_10253855
462 Ga0114129_10279730
463 Ga0105248_10042456
464 Ga0105248_10160806
465 Ga0105249_10037132
466 Ga0105249_10084665
467 Ga0105249_10096483
468 Ga0105239_10006459
469 Ga0105246_10127124
470 Ga0105246_10144196
471 Ga0157378_10112640
472 Ga0163162_10086931
473 Ga0163162_10231414
474 Ga0163162_10321420
475 Ga0163162_10369347
476 Ga0157375_10033294
477 Ga0157375_10202234
478 Ga0163163_10154041
479 Ga0157380_10005904
480 Ga0157380_10183724
481 Ga0157379_10025356
482 Ga0157379_10027008
483 Ga0206350_10987749
484 Ga0224712_10004361
485 Ga0207682_10004513
486 Ga0207680_10012378
487 Ga0207645_10026812
488 Ga0207643_10017982
489 Ga0207705_10011288
490 Ga0207684_10083828
491 Ga0207684_10171352
492 Ga0207695_10017321
493 Ga0207662_10120905
494 Ga0207649_10041607
495 Ga0207646_10000001
496 Ga0207646_10000006
497 Ga0207646_10009872
498 Ga0207646_10017396
499 Ga0207646_10072165
500 Ga0207646_10099948
501 Ga0207681_10280671
502 Ga0207650_10016507
503 Ga0207650_10018191
504 Ga0207650_10020997
505 Ga0207659_10002073
506 Ga0207687_10192488
507 Ga0207644_10051450
508 Ga0207706_10034648
509 Ga0207670_10000021
510 Ga0207670_10001776
511 Ga0207670_10125946
512 Ga0207711_10211213
513 Ga0207689_10032585
514 Ga0207689_10254316
515 Ga0207661_10004607
516 Ga0207679_10000879
517 Ga0207679_10013153
518 Ga0207667_10129724
519 Ga0207667_10237683
520 Ga0207651_10003635
521 Ga0207712_10027440
522 Ga0207712_10041977
523 Ga0207708_10042121
524 Ga0207702_10213437
525 Ga0207676_10075464
526 Ga0207675_100081818
527 Ga0209588_1000157
528 Ga0207428_10003303
529 Ga0207428_10016241
530 Ga0207428_10203447
531 Ga0268266_10312956
532 Ga0268265_10194848
533 Ga0268264_10124530
534 Ga0265316_10026460
535 Ga0307408_100121555
536 Ga0307410_10224675
537 Ga0307411_10056808
538 Ga0373949_0000282
539 Ga0373927_0109057
540 Ga0373933_0017779
541 Ga0373947_0076013
542 Ga0373937_0038604
543 Ga0373937_0063218
544 Ga0373925_0003301
545 Ga0373925_0085767
546 Ga0436362_0342673
547 Ga0453683_0002061
548 Ga0453684_0000054
549 Ga0453684_0063200
550 Ga0451576_0014609
551 Ga0451576_0021777
552 Ga0451576_0269495
553 Ga0495653_0061731
554 Ga0495628_0301721
555 Ga0495586_0042183
556 Ga0495667_0097480
557 Ga0495600_0042277
558 Ga0495636_0000247
559 Ga0495674_0097663
560 Ga0495680_0016648
561 Ga0495684_0106375
562 Ga0495684_0146920
563 Ga0495684_0181133
564 Ga0496104_0123888
565 Ga0496108_0005031
566 Ga0496109_0002987
567 Ga0496109_0124887
568 Ga0496110_0060217
569 Ga0501034_0115011
570 Ga0501039_0097171
571 Ga0501040_0079234
572 Ga0501040_0079892
573 Ga0501047_0085902
574 Ga0501071_0241633
575 Ga0501072_0146192
576 Ga0501076_0098480
577 Ga0501080_0226018
578 Ga0501045_0095433
579 nmdc:mga00v17_48902_c1
580 nmdc:mga00v17_49063_c1
581 nmdc:mga0k408_50967_c1
582 nmdc:mga07m45_4750_c2
583 nmdc:mga05p37_19516_c1
584 nmdc:mga05p37_21658_c1
585 nmdc:mga05p37_22358_c1
586 nmdc:mga09592_100459_c1
587 nmdc:mga09592_10220_c1
588 nmdc:mga09592_18353_c1
589 nmdc:mga09592_18841_c1
590 nmdc:mga09592_30514_c1
591 nmdc:mga09592_4872_c1
592 nmdc:mga0qj67_120718_c1
593 nmdc:mga0qj67_199867_c1
594 nmdc:mga0qj67_222497_c1
595 nmdc:mga0qj67_233947_c1
596 nmdc:mga06r32_112814_c2
597 nmdc:mga06r32_180649_c1
598 nmdc:mga06r32_184783_c1
599 nmdc:mga06r32_21227_c1
600 nmdc:mga06r32_402451_c1
601 nmdc:mga06r32_4910_c1
602 nmdc:mga08y16_144743_c1
603 nmdc:mga08y16_1979_c1
604 nmdc:mga08y16_24137_c1
605 nmdc:mga08y16_269339_c1
606 nmdc:mga08y16_3386_c1
607 nmdc:mga08y16_34471_c1
608 nmdc:mga08y16_62268_c1
609 nmdc:mga0a205_90600_c1
610 Ga0495619_0067834
611 Ga0500622_0098279
612 Ga0587070_007670
613 Ga0587088_006651
614 Ga0587128_001384
615 Ga0587107_002710
616 Ga0501082_0089999
617 Ga0501082_0169132
618 Ga0501082_0271516
619 Ga0530510_0032425
620 Ga0530510_0038701
621 Ga0530510_0124290
622 2738816898
623 2831906365
624 2964376499

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

47

417

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bq5-assembly2.cif.gz_B crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine (monoclinic) 0.8704 4 379
1t7l-assembly1.cif.gz_A crystal structure of cobalamin-independent methionine synthase from t. maritima 0.8676 4 381
1t7l-assembly2.cif.gz_B crystal structure of cobalamin-independent methionine synthase from t. maritima 0.8665 4 379
3bq5-assembly1.cif.gz_A crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine (monoclinic) 0.8656 4 378
1xdj-assembly1.cif.gz_A crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine 0.8655 4 381
ID Description Score Start End Superfamily
af_K7MME4_84_171_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9238 304 380 3.20.20.210
1xdjA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8721 4 381 3.20.20.210
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8532 4 380 3.20.20.210
2nq5A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8487 4 379 3.20.20.210
af_Q54X49_428_818_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8432 2 378 3.20.20.210
ID Description Score Start End GO Terms
AF-A0A7Y5JR20-F1-model_v4 Cobalamin-independent methionine synthase II family protein 0.9748 4 378 GO:0003871
GO:0008270
GO:0009086
AF-A0A2D6F8K9-F1-model_v4 Vitamin-B12 independent methionine synthase 0.9685 1 344 GO:0003871
GO:0008270
GO:0009086
AF-A0A1Q8FAS7-F1-model_v4 deleted 0.9683 2 381
AF-A0A7C1K4D1-F1-model_v4 Vitamin-B12 independent methionine synthase 0.9667 1 381 GO:0003871
GO:0008270
GO:0009086
AF-V4J4W4-F1-model_v4 Uncharacterized protein 0.9608 7 208 GO:0003871
GO:0008270
GO:0009086

Map