F401540

General Info

Members Datasets Scaffolds Average Seq Length
312 216 624 377

Family's Representative Sequence

Representative Sequence 3300005328|Ga0070676_10118083|Ga0070676_101180832
Length 427
Sequence MLHHAARVLPPVRRRLLTRRLLLNLPARCCVECGPKMESSKPSLHVNLSVGDPAPWFHQRSSSKANFVFSSVAGRYIVLCFFGSAAEPRSRAALQSVLAHRHHFDDISCSFFGVSNDPEDERQKRVASSLPGIRFFWDSDGKISRLYGAIARDATPGKGETQVHRFWAVLDPTLRVLFITPFVPDGSDADALFGYLEKLPPPDRFAGIEVQAPILFLPNVFEQDLCRDLIRIYEEHGGKESGVMRDVEGRTAYIEDHSFKKRRDYTIVQPELLEQTRARVARRIYPEILKIYSFKATRMERYLVSCYSADDGAHFRPHRDNTTRGTAHRRFAVSINLNSEFEGGEICFPEYGRKSFKPPPGGAVIFPCALLHAVTKVTSGSRYAFLPFLYDEEAAKIREANAKFLGGARDAVPEDEDSAAPAAPHQE

Samples

Sample ID Description Type Environment
1 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
4 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
5 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
6 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
11 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
51 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
52 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
55 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
58 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
82 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
85 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
87 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
125 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
129 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
130 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
131 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
132 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
133 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
134 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
135 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
136 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
137 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
138 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
139 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
140 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
141 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
144 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
145 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
146 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
147 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
148 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
149 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
150 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
151 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
152 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
153 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
154 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
155 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
156 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
157 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
158 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
159 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
160 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
161 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
162 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
163 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
164 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
165 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
166 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
167 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
168 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
169 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
170 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
171 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
172 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
173 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
174 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
175 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
176 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
177 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
178 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
179 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
180 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
181 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
182 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
183 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
184 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
185 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
186 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
187 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
188 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
194 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
195 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
196 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
197 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
198 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
199 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
200 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
201 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
202 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
203 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
204 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
205 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
206 2508501050 Microvirga lupini Lut6 Isolate Nodule
207 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
208 2511231012 Pseudomonas sp. GM33 Isolate Nodule
209 2511231015 Pseudomonas sp. GM49 Isolate Nodule
210 2511231017 Pseudomonas sp. GM55 Isolate Nodule
211 2738543004 Pseudomonas sp. GV085 Isolate Unclassified
212 2808606382 Pseudomonas sp. SJZ080 Isolate Rhizosphere
213 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
214 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
215 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
216 2939636861 Pseudomonas sp. 2725 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.47
Metatranscriptomes 0
Isolates 3.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.05
Nodule 2.24
Rhizoplane 4.17
Rhizosphere 84.94
Stem 0
Stem Tuber 0
Unclassified 0.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10118083 3300005328 Bacteria 1661
2 JGI24746J21847_1005342 3300001977 Bacteria 2006
3 JGI24743J22301_10006424 3300001991 Bacteria 2004
4 JGI24750J21931_1001302 3300002070 Bacteria 3139
5 JGI24749J21850_1002425 3300002076 Bacteria 2620
6 JGI24742J22300_10000688 3300002244 Bacteria 5099
7 JGI25153J46596_10003756 3300003215 Bacteria 8380
8 rootH2_10124840 3300003320 Bacteria 1996
9 rootL2_10059356 3300003322 Bacteria 2559
10 JGI25404J52841_10000813 3300003659 Bacteria 4977
11 Ga0065714_10079087 3300005288 Bacteria 2543
12 Ga0070676_10029136 3300005328 Bacteria 3139
13 Ga0070690_100026462 3300005330 Bacteria 3578
14 Ga0070670_100048960 3300005331 Bacteria 3636
15 Ga0068869_100007259 3300005334 Bacteria 7062
16 Ga0070666_10019084 3300005335 Bacteria 4421
17 Ga0068868_100010392 3300005338 Bacteria 6737
18 Ga0070689_100079164 3300005340 Bacteria 2577
19 Ga0070661_100138473 3300005344 Bacteria 1833
20 Ga0070668_100107802 3300005347 Bacteria 2214
21 Ga0070668_100154832 3300005347 Bacteria 1856
22 Ga0070675_100064571 3300005354 Bacteria 3026
23 Ga0070671_100039225 3300005355 Bacteria 3931
24 Ga0070674_100031070 3300005356 Bacteria 3535
25 Ga0070674_100111989 3300005356 Bacteria 2005
26 Ga0070674_100120828 3300005356 Bacteria 1939
27 Ga0070673_100020932 3300005364 Bacteria 4728
28 Ga0070688_100013932 3300005365 Bacteria 4548
29 Ga0070667_100048372 3300005367 Bacteria 3579
30 Ga0070700_100017507 3300005441 Bacteria 4100
31 Ga0070663_100041270 3300005455 Bacteria 3235
32 Ga0070662_100044895 3300005457 Bacteria 3168
33 Ga0068867_100027506 3300005459 Bacteria 4087
34 Ga0068867_100034640 3300005459 Bacteria 3660
35 Ga0070684_100015918 3300005535 Bacteria 6139
36 Ga0068853_100135525 3300005539 Bacteria 2207
37 Ga0070672_100046934 3300005543 Bacteria 3349
38 Ga0070686_100013446 3300005544 Bacteria 4689
39 Ga0070686_100078743 3300005544 Bacteria 2177
40 Ga0070693_100093481 3300005547 Bacteria 1817
41 Ga0070665_100030438 3300005548 Bacteria 5430
42 Ga0070665_100076361 3300005548 Bacteria 3357
43 Ga0070665_100113772 3300005548 Bacteria 2709
44 Ga0070704_100055172 3300005549 Bacteria 2816
45 Ga0068855_100000105 3300005563 Bacteria 104272
46 Ga0070664_100118448 3300005564 Bacteria 2316
47 Ga0068856_100315919 3300005614 Bacteria 1579
48 Ga0068852_100111046 3300005616 Bacteria 2492
49 Ga0068861_100102408 3300005719 Bacteria 2279
50 Ga0068861_100125362 3300005719 Bacteria 2077
51 Ga0068870_10007546 3300005840 Bacteria 4854
52 Ga0068863_100133982 3300005841 Bacteria 2366
53 Ga0068858_100054060 3300005842 Bacteria 3713
54 Ga0068860_100051204 3300005843 Bacteria 3929
55 Ga0068862_100039920 3300005844 Bacteria 3988
56 Ga0068862_100071365 3300005844 Bacteria 2998
57 Ga0081455_10001285 3300005937 Bacteria 31211
58 Ga0081455_10007814 3300005937 Bacteria 11201
59 Ga0081455_10023095 3300005937 Bacteria 5794
60 Ga0081455_10052086 3300005937 Bacteria 3506
61 Ga0081540_1000092 3300005983 Bacteria 94188
62 Ga0081540_1029270 3300005983 Bacteria 3072
63 Ga0081539_10005447 3300005985 Bacteria 12989
64 Ga0081539_10018931 3300005985 Bacteria 4743
65 Ga0081539_10022676 3300005985 Bacteria 4142
66 Ga0081539_10034777 3300005985 Bacteria 3039
67 Ga0075365_10004123 3300006038 Bacteria 7641
68 Ga0075365_10009143 3300006038 Bacteria 5676
69 Ga0075365_10028346 3300006038 Bacteria 3571
70 Ga0075365_10090021 3300006038 Bacteria 2089
71 Ga0075364_10061604 3300006051 Bacteria 2461
72 Ga0075364_10114113 3300006051 Bacteria 1805
73 Ga0075364_10201435 3300006051 Bacteria 1349
74 Ga0075432_10047846 3300006058 Bacteria 1503
75 Ga0075432_10067245 3300006058 Bacteria 1283
76 Ga0070712_100107139 3300006175 Bacteria 2079
77 Ga0075367_10042464 3300006178 Bacteria 2660
78 Ga0075367_10131731 3300006178 Bacteria 1546
79 Ga0075369_10098519 3300006186 Bacteria 1310
80 Ga0097621_100053281 3300006237 Bacteria 3297
81 Ga0075428_100120501 3300006844 Bacteria 2856
82 Ga0075431_100005066 3300006847 Bacteria 12963
83 Ga0075431_100118331 3300006847 Bacteria 2733
84 Ga0068865_100109511 3300006881 Bacteria 2035
85 Ga0075436_100060347 3300006914 Bacteria 2619
86 Ga0105240_10106245 3300009093 Bacteria 3406
87 Ga0105240_10257645 3300009093 Bacteria 2014
88 Ga0111539_10018305 3300009094 Bacteria 8677
89 Ga0111539_10021590 3300009094 Bacteria 7920
90 Ga0111539_10031119 3300009094 Bacteria 6484
91 Ga0111539_10228269 3300009094 Bacteria 2168
92 Ga0111539_10671422 3300009094 Bacteria 1207
93 Ga0105245_10065527 3300009098 Bacteria 3285
94 Ga0105245_10256815 3300009098 Bacteria 1699
95 Ga0105247_10007255 3300009101 Bacteria 6808
96 Ga0114129_10006220 3300009147 Bacteria 16930
97 Ga0105243_10048392 3300009148 Bacteria 3351
98 Ga0105243_10076682 3300009148 Bacteria 2717
99 Ga0105243_10141553 3300009148 Bacteria 2053
100 Ga0105241_10114233 3300009174 Bacteria 2166
101 Ga0105248_10002901 3300009177 Bacteria 19023
102 Ga0105248_10012815 3300009177 Bacteria 9249
103 Ga0105248_10565957 3300009177 Bacteria 1282
104 Ga0105237_10291037 3300009545 Bacteria 1636
105 Ga0105238_10102376 3300009551 Bacteria 2845
106 Ga0105238_10264198 3300009551 Bacteria 1701
107 Ga0105249_10037423 3300009553 Bacteria 4404
108 Ga0105249_10398439 3300009553 Bacteria 1406
109 Ga0105239_10010364 3300010375 Bacteria 10434
110 Ga0105239_10365008 3300010375 Bacteria 1631
111 Ga0105246_10029413 3300011119 Bacteria 3618
112 Ga0105246_10052853 3300011119 Bacteria 2794
113 Ga0157369_10014545 3300013105 Bacteria 8879
114 Ga0157369_10252089 3300013105 Bacteria 1842
115 Ga0157374_10093399 3300013296 Bacteria 2872
116 Ga0157378_10026213 3300013297 Bacteria 5138
117 Ga0157378_10042642 3300013297 Bacteria 4027
118 Ga0163162_10105584 3300013306 Bacteria 2911
119 Ga0163162_10453858 3300013306 Unclassified 1414
120 Ga0157375_10063628 3300013308 Bacteria 3671
121 Ga0157375_10079358 3300013308 Bacteria 3318
122 Ga0163163_10078887 3300014325 Bacteria 3290
123 Ga0157380_10048562 3300014326 Bacteria 3343
124 Ga0157377_10056826 3300014745 Bacteria 2223
125 Ga0157379_10086941 3300014968 Bacteria 2803
126 Ga0157376_10143673 3300014969 Bacteria 2144
127 Ga0163161_10002573 3300017792 Bacteria 12954
128 Ga0163161_10039091 3300017792 Bacteria 3404
129 Ga0163161_10084552 3300017792 Bacteria 2340
130 Ga0163161_10135726 3300017792 Bacteria 1860
131 Ga0163161_10191893 3300017792 Bacteria 1571
132 Ga0209676_1014776 3300025292 Bacteria 2915
133 Ga0209758_1000362 3300025297 Bacteria 80796
134 Ga0209050_1000973 3300025298 Bacteria 36681
135 Ga0207697_10016501 3300025315 Bacteria 3042
136 Ga0207696_1049069 3300025711 Bacteria 1212
137 Ga0207655_1020841 3300025728 Bacteria 3352
138 Ga0207710_10054042 3300025900 Bacteria 1808
139 Ga0207688_10000186 3300025901 Bacteria 27430
140 Ga0207688_10052088 3300025901 Bacteria 2293
141 Ga0207680_10063751 3300025903 Bacteria 2257
142 Ga0207645_10028334 3300025907 Bacteria 3616
143 Ga0207645_10111762 3300025907 Bacteria 1769
144 Ga0207643_10001949 3300025908 Bacteria 11409
145 Ga0207695_10000004 3300025913 Bacteria 1288665
146 Ga0207695_10038076 3300025913 Bacteria 5183
147 Ga0207695_10158318 3300025913 Bacteria 2198
148 Ga0207694_10000049 3300025924 Bacteria 160541
149 Ga0207650_10125643 3300025925 Bacteria 2002
150 Ga0207659_10019281 3300025926 Bacteria 4486
151 Ga0207687_10081977 3300025927 Bacteria 2333
152 Ga0207644_10047399 3300025931 Bacteria 3066
153 Ga0207706_10124344 3300025933 Bacteria 2269
154 Ga0207709_10010381 3300025935 Bacteria 5127
155 Ga0207709_10011168 3300025935 Bacteria 4954
156 Ga0207709_10142221 3300025935 Bacteria 1650
157 Ga0207670_10015421 3300025936 Bacteria 4566
158 Ga0207669_10147990 3300025937 Bacteria 1640
159 Ga0207704_10011867 3300025938 Bacteria 4307
160 Ga0207704_10040477 3300025938 Bacteria 2724
161 Ga0207704_10202096 3300025938 Bacteria 1455
162 Ga0207691_10053281 3300025940 Bacteria 3694
163 Ga0207711_10001488 3300025941 Bacteria 21817
164 Ga0207689_10033221 3300025942 Bacteria 4287
165 Ga0207679_10116090 3300025945 Bacteria 2122
166 Ga0207667_10000012 3300025949 Bacteria 445492
167 Ga0207651_10010013 3300025960 Bacteria 5227
168 Ga0207651_10256856 3300025960 Bacteria 1433
169 Ga0207712_10053854 3300025961 Bacteria 2825
170 Ga0207668_10055422 3300025972 Bacteria 2755
171 Ga0207668_10082564 3300025972 Bacteria 2335
172 Ga0207677_10053414 3300026023 Bacteria 2750
173 Ga0207678_10032096 3300026067 Bacteria 4578
174 Ga0207678_10036217 3300026067 Bacteria 4295
175 Ga0207708_10020707 3300026075 Bacteria 4961
176 Ga0207708_10121875 3300026075 Bacteria 2032
177 Ga0207641_10036386 3300026088 Bacteria 4109
178 Ga0207648_10013242 3300026089 Bacteria 7683
179 Ga0207676_10012861 3300026095 Bacteria 6009
180 Ga0207675_100004439 3300026118 Bacteria 13560
181 Ga0207675_100037985 3300026118 Bacteria 4493
182 Ga0207683_10216179 3300026121 Bacteria 1746
183 Ga0207698_10237762 3300026142 Bacteria 1658
184 Ga0207428_10000700 3300027907 Bacteria 38951
185 Ga0207428_10011929 3300027907 Bacteria 7651
186 Ga0207428_10152117 3300027907 Bacteria 1761
187 Ga0207428_10159309 3300027907 Bacteria 1715
188 Ga0268266_10021539 3300028379 Bacteria 5491
189 Ga0268266_10057156 3300028379 Bacteria 3357
190 Ga0268265_10012385 3300028380 Bacteria 5780
191 Ga0268264_10020797 3300028381 Bacteria 5363
192 Ga0265325_10045903 3300031241 Bacteria 2268
193 Ga0265327_10059050 3300031251 Bacteria 1966
194 Ga0307408_100164140 3300031548 Bacteria 1767
195 Ga0307410_10009408 3300031852 Bacteria 5481
196 Ga0307406_10115498 3300031901 Bacteria 1856
197 Ga0307409_100030282 3300031995 Bacteria 3886
198 Ga0307409_100121449 3300031995 Bacteria 2213
199 Ga0307409_100185457 3300031995 Bacteria 1846
200 Ga0307414_10025507 3300032004 Bacteria 3789
201 Ga0307411_10060977 3300032005 Bacteria 2508
202 Ga0395905_0043821 3300037471 Bacteria 4198
203 Ga0439438_008697 3300041405 Bacteria 3342
204 Ga0439447_009819 3300041407 Bacteria 2877
205 Ga0439466_0006902 3300041411 Bacteria 4304
206 Ga0439432_018113 3300042006 Bacteria 2357
207 Ga0439452_004183 3300042010 Bacteria 4895
208 Ga0451576_0004692 3300045051 Bacteria 17575
209 Ga0451576_0016728 3300045051 Bacteria 8089
210 Ga0495617_000287 3300046452 Bacteria 28968
211 Ga0495603_0062847 3300046455 Bacteria 2191
212 Ga0495591_013603 3300046458 Bacteria 2965
213 Ga0495638_0006986 3300046460 Bacteria 8150
214 Ga0495638_0011063 3300046460 Bacteria 6236
215 Ga0495638_0025879 3300046460 Bacteria 3809
216 Ga0495605_0000501 3300046474 Bacteria 33539
217 Ga0495605_0074004 3300046474 Bacteria 1604
218 Ga0495584_0002730 3300046491 Bacteria 9888
219 Ga0495607_0034786 3300046501 Bacteria 3054
220 Ga0495610_0036165 3300046512 Bacteria 2526
221 Ga0495620_0001032 3300046515 Bacteria 17117
222 Ga0495637_0003215 3300046520 Bacteria 8721
223 Ga0495648_0008287 3300046524 Bacteria 8198
224 Ga0495648_0017413 3300046524 Bacteria 5135
225 Ga0495648_0031403 3300046524 Bacteria 3497
226 Ga0495648_0065036 3300046524 Bacteria 2146
227 Ga0495642_0000037 3300046528 Bacteria 79709
228 Ga0495652_0068400 3300046529 Bacteria 2975
229 Ga0495654_0000597 3300046530 Bacteria 28840
230 Ga0495654_0038704 3300046530 Bacteria 2383
231 Ga0495598_0012348 3300046537 Bacteria 2095
232 Ga0495609_0084696 3300046538 Bacteria 1383
233 Ga0495621_0004048 3300046539 Bacteria 4079
234 Ga0495625_0002148 3300046660 Bacteria 21937
235 Ga0495625_0066453 3300046660 Bacteria 2540
236 Ga0495661_0029160 3300046665 Bacteria 3525
237 Ga0495588_0063753 3300046674 Bacteria 1911
238 Ga0495670_0004722 3300046691 Bacteria 6690
239 Ga0495670_0017001 3300046691 Bacteria 3576
240 Ga0495671_0006910 3300046692 Bacteria 6512
241 Ga0495649_0000140 3300046694 Bacteria 62872
242 Ga0495649_0041632 3300046694 Bacteria 2511
243 Ga0495589_0012746 3300046794 Bacteria 4346
244 Ga0495589_0042304 3300046794 Bacteria 2270
245 Ga0495672_0001321 3300047320 Bacteria 24659
246 Ga0495672_0002005 3300047320 Bacteria 19233
247 Ga0495683_0000411 3300047323 Bacteria 34275
248 Ga0495683_0013459 3300047323 Bacteria 4279
249 Ga0495683_0017903 3300047323 Bacteria 3668
250 Ga0495687_000881 3300047443 Bacteria 31697
251 Ga0495687_002437 3300047443 Bacteria 14957
252 Ga0495685_055407 3300047447 Bacteria 1341
253 Ga0495673_0006655 3300047469 Bacteria 6768
254 Ga0495673_0009715 3300047469 Bacteria 5297
255 Ga0495681_0000359 3300047470 Bacteria 35569
256 Ga0495681_0002740 3300047470 Bacteria 12472
257 Ga0495626_0000079 3300048091 Bacteria 129922
258 Ga0496103_0005396 3300048906 Bacteria 7654
259 Ga0496105_0017770 3300048908 Bacteria 5705
260 Ga0496106_0031605 3300048909 Bacteria 3945
261 Ga0496106_0094662 3300048909 Bacteria 2310
262 Ga0496107_0020257 3300048910 Bacteria 4695
263 Ga0496108_0027901 3300048911 Bacteria 4667
264 Ga0496109_0048858 3300048912 Bacteria 3849
265 Ga0496110_0017621 3300048913 Bacteria 5970
266 Ga0496110_0349913 3300048913 Bacteria 1346
267 Ga0496111_0028253 3300048914 Bacteria 3974
268 Ga0496112_0036338 3300048915 Bacteria 4805
269 Ga0496114_0028747 3300048917 Bacteria 4564
270 Ga0496115_0005401 3300048918 Bacteria 9292
271 Ga0496118_0024255 3300048921 Bacteria 5243
272 Ga0496124_0016120 3300048927 Bacteria 7128
273 Ga0495682_0002585 3300049460 Bacteria 8506
274 Ga0495682_0007187 3300049460 Bacteria 4448
275 Ga0501034_0260161 3300049571 Bacteria 1678
276 Ga0501034_0281111 3300049571 Bacteria 1604
277 Ga0501036_0119576 3300049572 Bacteria 2225
278 Ga0501036_0218258 3300049572 Bacteria 1601
279 Ga0501039_0254345 3300049575 Bacteria 1381
280 Ga0501042_0055134 3300049578 Bacteria 2836
281 Ga0501047_0371806 3300049581 Bacteria 1264
282 Ga0501069_0162640 3300049585 Unclassified 1286
283 Ga0501073_0284719 3300049589 Bacteria 1140
284 nmdc:mga03683_20722_c1 3300050489 Bacteria 2526
285 nmdc:mga00v17_14964_c1 3300050491 Bacteria 4345
286 nmdc:mga00v17_21117_c1 3300050491 Bacteria 3739
287 nmdc:mga00v17_6947_c1 3300050491 Bacteria 6020
288 nmdc:mga0yw44_14543_c1 3300050492 Bacteria 4183
289 nmdc:mga0yw44_26457_c1 3300050492 Bacteria 3314
290 nmdc:mga06z11_116983_c1 3300050494 Unclassified 1483
291 nmdc:mga05p37_13004_c1 3300050507 Bacteria 9960
292 nmdc:mga0qj67_124034_c1 3300050509 Bacteria 2090
293 nmdc:mga0qj67_69318_c2 3300050509 Bacteria 2058
294 nmdc:mga06r32_10726_c1 3300050510 Bacteria 8252
295 nmdc:mga06r32_45431_c1 3300050510 Bacteria 4186
296 nmdc:mga08y16_353154_c1 3300050511 Bacteria 1510
297 nmdc:mga08y16_54824_c1 3300050511 Bacteria 4166
298 nmdc:mga08y16_96_c1 3300050511 Bacteria 74719
299 nmdc:mga08x19_281551_c1 3300050514 Bacteria 1152
300 Ga0500568_0001156 3300053139 Bacteria 17662
301 Ga0501082_0000183 3300060353 Bacteria 54241
302 2508734338 2508501050 Bacteria 9633614
303 2509079245 2508501114 Bacteria 7082538
304 2511303607 2511231012 Bacteria 6738011
305 2511321789 2511231015 Bacteria 6598026
306 2511332431 2511231017 Bacteria 6503007
307 2739200172 2738543004 Bacteria 6381073
308 2808958618 2808606382 Bacteria 6841132
309 2829746048 2829745981 Bacteria 5406054
310 2835315658 2835312727 Bacteria 7413381
311 2894242854 2894232714 Bacteria 8834183
312 2939637403 2939636861 Bacteria 6297853
313 Ga0070676_10118083
314 JGI24746J21847_1005342
315 JGI24743J22301_10006424
316 JGI24750J21931_1001302
317 JGI24749J21850_1002425
318 JGI24742J22300_10000688
319 JGI25153J46596_10003756
320 rootH2_10124840
321 rootL2_10059356
322 JGI25404J52841_10000813
323 Ga0065714_10079087
324 Ga0070676_10029136
325 Ga0070690_100026462
326 Ga0070670_100048960
327 Ga0068869_100007259
328 Ga0070666_10019084
329 Ga0068868_100010392
330 Ga0070689_100079164
331 Ga0070661_100138473
332 Ga0070668_100107802
333 Ga0070668_100154832
334 Ga0070675_100064571
335 Ga0070671_100039225
336 Ga0070674_100031070
337 Ga0070674_100111989
338 Ga0070674_100120828
339 Ga0070673_100020932
340 Ga0070688_100013932
341 Ga0070667_100048372
342 Ga0070700_100017507
343 Ga0070663_100041270
344 Ga0070662_100044895
345 Ga0068867_100027506
346 Ga0068867_100034640
347 Ga0070684_100015918
348 Ga0068853_100135525
349 Ga0070672_100046934
350 Ga0070686_100013446
351 Ga0070686_100078743
352 Ga0070693_100093481
353 Ga0070665_100030438
354 Ga0070665_100076361
355 Ga0070665_100113772
356 Ga0070704_100055172
357 Ga0068855_100000105
358 Ga0070664_100118448
359 Ga0068856_100315919
360 Ga0068852_100111046
361 Ga0068861_100102408
362 Ga0068861_100125362
363 Ga0068870_10007546
364 Ga0068863_100133982
365 Ga0068858_100054060
366 Ga0068860_100051204
367 Ga0068862_100039920
368 Ga0068862_100071365
369 Ga0081455_10001285
370 Ga0081455_10007814
371 Ga0081455_10023095
372 Ga0081455_10052086
373 Ga0081540_1000092
374 Ga0081540_1029270
375 Ga0081539_10005447
376 Ga0081539_10018931
377 Ga0081539_10022676
378 Ga0081539_10034777
379 Ga0075365_10004123
380 Ga0075365_10009143
381 Ga0075365_10028346
382 Ga0075365_10090021
383 Ga0075364_10061604
384 Ga0075364_10114113
385 Ga0075364_10201435
386 Ga0075432_10047846
387 Ga0075432_10067245
388 Ga0070712_100107139
389 Ga0075367_10042464
390 Ga0075367_10131731
391 Ga0075369_10098519
392 Ga0097621_100053281
393 Ga0075428_100120501
394 Ga0075431_100005066
395 Ga0075431_100118331
396 Ga0068865_100109511
397 Ga0075436_100060347
398 Ga0105240_10106245
399 Ga0105240_10257645
400 Ga0111539_10018305
401 Ga0111539_10021590
402 Ga0111539_10031119
403 Ga0111539_10228269
404 Ga0111539_10671422
405 Ga0105245_10065527
406 Ga0105245_10256815
407 Ga0105247_10007255
408 Ga0114129_10006220
409 Ga0105243_10048392
410 Ga0105243_10076682
411 Ga0105243_10141553
412 Ga0105241_10114233
413 Ga0105248_10002901
414 Ga0105248_10012815
415 Ga0105248_10565957
416 Ga0105237_10291037
417 Ga0105238_10102376
418 Ga0105238_10264198
419 Ga0105249_10037423
420 Ga0105249_10398439
421 Ga0105239_10010364
422 Ga0105239_10365008
423 Ga0105246_10029413
424 Ga0105246_10052853
425 Ga0157369_10014545
426 Ga0157369_10252089
427 Ga0157374_10093399
428 Ga0157378_10026213
429 Ga0157378_10042642
430 Ga0163162_10105584
431 Ga0163162_10453858
432 Ga0157375_10063628
433 Ga0157375_10079358
434 Ga0163163_10078887
435 Ga0157380_10048562
436 Ga0157377_10056826
437 Ga0157379_10086941
438 Ga0157376_10143673
439 Ga0163161_10002573
440 Ga0163161_10039091
441 Ga0163161_10084552
442 Ga0163161_10135726
443 Ga0163161_10191893
444 Ga0209676_1014776
445 Ga0209758_1000362
446 Ga0209050_1000973
447 Ga0207697_10016501
448 Ga0207696_1049069
449 Ga0207655_1020841
450 Ga0207710_10054042
451 Ga0207688_10000186
452 Ga0207688_10052088
453 Ga0207680_10063751
454 Ga0207645_10028334
455 Ga0207645_10111762
456 Ga0207643_10001949
457 Ga0207695_10000004
458 Ga0207695_10038076
459 Ga0207695_10158318
460 Ga0207694_10000049
461 Ga0207650_10125643
462 Ga0207659_10019281
463 Ga0207687_10081977
464 Ga0207644_10047399
465 Ga0207706_10124344
466 Ga0207709_10010381
467 Ga0207709_10011168
468 Ga0207709_10142221
469 Ga0207670_10015421
470 Ga0207669_10147990
471 Ga0207704_10011867
472 Ga0207704_10040477
473 Ga0207704_10202096
474 Ga0207691_10053281
475 Ga0207711_10001488
476 Ga0207689_10033221
477 Ga0207679_10116090
478 Ga0207667_10000012
479 Ga0207651_10010013
480 Ga0207651_10256856
481 Ga0207712_10053854
482 Ga0207668_10055422
483 Ga0207668_10082564
484 Ga0207677_10053414
485 Ga0207678_10032096
486 Ga0207678_10036217
487 Ga0207708_10020707
488 Ga0207708_10121875
489 Ga0207641_10036386
490 Ga0207648_10013242
491 Ga0207676_10012861
492 Ga0207675_100004439
493 Ga0207675_100037985
494 Ga0207683_10216179
495 Ga0207698_10237762
496 Ga0207428_10000700
497 Ga0207428_10011929
498 Ga0207428_10152117
499 Ga0207428_10159309
500 Ga0268266_10021539
501 Ga0268266_10057156
502 Ga0268265_10012385
503 Ga0268264_10020797
504 Ga0265325_10045903
505 Ga0265327_10059050
506 Ga0307408_100164140
507 Ga0307410_10009408
508 Ga0307406_10115498
509 Ga0307409_100030282
510 Ga0307409_100121449
511 Ga0307409_100185457
512 Ga0307414_10025507
513 Ga0307411_10060977
514 Ga0395905_0043821
515 Ga0439438_008697
516 Ga0439447_009819
517 Ga0439466_0006902
518 Ga0439432_018113
519 Ga0439452_004183
520 Ga0451576_0004692
521 Ga0451576_0016728
522 Ga0495617_000287
523 Ga0495603_0062847
524 Ga0495591_013603
525 Ga0495638_0006986
526 Ga0495638_0011063
527 Ga0495638_0025879
528 Ga0495605_0000501
529 Ga0495605_0074004
530 Ga0495584_0002730
531 Ga0495607_0034786
532 Ga0495610_0036165
533 Ga0495620_0001032
534 Ga0495637_0003215
535 Ga0495648_0008287
536 Ga0495648_0017413
537 Ga0495648_0031403
538 Ga0495648_0065036
539 Ga0495642_0000037
540 Ga0495652_0068400
541 Ga0495654_0000597
542 Ga0495654_0038704
543 Ga0495598_0012348
544 Ga0495609_0084696
545 Ga0495621_0004048
546 Ga0495625_0002148
547 Ga0495625_0066453
548 Ga0495661_0029160
549 Ga0495588_0063753
550 Ga0495670_0004722
551 Ga0495670_0017001
552 Ga0495671_0006910
553 Ga0495649_0000140
554 Ga0495649_0041632
555 Ga0495589_0012746
556 Ga0495589_0042304
557 Ga0495672_0001321
558 Ga0495672_0002005
559 Ga0495683_0000411
560 Ga0495683_0013459
561 Ga0495683_0017903
562 Ga0495687_000881
563 Ga0495687_002437
564 Ga0495685_055407
565 Ga0495673_0006655
566 Ga0495673_0009715
567 Ga0495681_0000359
568 Ga0495681_0002740
569 Ga0495626_0000079
570 Ga0496103_0005396
571 Ga0496105_0017770
572 Ga0496106_0031605
573 Ga0496106_0094662
574 Ga0496107_0020257
575 Ga0496108_0027901
576 Ga0496109_0048858
577 Ga0496110_0017621
578 Ga0496110_0349913
579 Ga0496111_0028253
580 Ga0496112_0036338
581 Ga0496114_0028747
582 Ga0496115_0005401
583 Ga0496118_0024255
584 Ga0496124_0016120
585 Ga0495682_0002585
586 Ga0495682_0007187
587 Ga0501034_0260161
588 Ga0501034_0281111
589 Ga0501036_0119576
590 Ga0501036_0218258
591 Ga0501039_0254345
592 Ga0501042_0055134
593 Ga0501047_0371806
594 Ga0501069_0162640
595 Ga0501073_0284719
596 nmdc:mga03683_20722_c1
597 nmdc:mga00v17_14964_c1
598 nmdc:mga00v17_21117_c1
599 nmdc:mga00v17_6947_c1
600 nmdc:mga0yw44_14543_c1
601 nmdc:mga0yw44_26457_c1
602 nmdc:mga06z11_116983_c1
603 nmdc:mga05p37_13004_c1
604 nmdc:mga0qj67_124034_c1
605 nmdc:mga0qj67_69318_c2
606 nmdc:mga06r32_10726_c1
607 nmdc:mga06r32_45431_c1
608 nmdc:mga08y16_353154_c1
609 nmdc:mga08y16_54824_c1
610 nmdc:mga08y16_96_c1
611 nmdc:mga08x19_281551_c1
612 Ga0500568_0001156
613 Ga0501082_0000183
614 2508734338
615 2509079245
616 2511303607
617 2511321789
618 2511332431
619 2739200172
620 2808958618
621 2829746048
622 2835315658
623 2894242854
624 2939637403

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00578

AhpC-TSA

AhpC/TSA family

50

178

0.91

PF13640

2OG-FeII_Oxy_3

2OG-Fe(II) oxygenase superfamily

302

390

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ax7-assembly1.cif.gz_A the crystal structure of a lysyl hydroxylase from acanthamoeba polyphaga mimivirus 0.8402 180 355
6ax6-assembly1.cif.gz_A the crystal structure of a lysyl hydroxylase from acanthamoeba polyphaga mimivirus 0.8346 180 355
6fxk-assembly1.cif.gz_A-2 crystal structure of full-length human lysyl hydroxylase lh3 0.8294 175 356
3drn-assembly2.cif.gz_B the crystal structure of bcp1 from sulfolobus sulfataricus 0.7893 14 164
6fxm-assembly1.cif.gz_A-2 crystal structure of full-length human lysyl hydroxylase lh3 - cocrystal with mn2+ 0.7856 175 356
ID Description Score Start End Superfamily
af_Q2G280_3_151_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8144 15 162 3.40.30.10
3dkqC01 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.8085 180 357 2.60.120.620
af_Q2G280_3_151_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8044 15 162 3.40.30.10
af_Q55E48_3_135_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.795 13 143 3.40.30.10
af_Q54W30_4_152_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7941 14 163 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A1G5IDF8-F1-model_v4 Predicted 2-oxoglutarate-and Fe(II)-dependent dioxygenase YbiX 0.9943 174 364 GO:0005506
GO:0016705
GO:0031418
GO:0051213
AF-A0A1E4ESU9-F1-model_v4 Fe2OG dioxygenase domain-containing protein 0.9908 174 367 GO:0005506
GO:0016705
GO:0031418
GO:0051213
AF-A0A3N5FNJ7-F1-model_v4 2OG-Fe(II) oxygenase 0.9883 5 385 GO:0005506
GO:0016209
GO:0016705
GO:0031418
GO:0051213
AF-A0A3D2RFE9-F1-model_v4 Fe2OG dioxygenase domain-containing protein 0.9837 249 359
AF-A0A317HW47-F1-model_v4 deleted 0.978 6 341

Map