F401356

General Info

Members Datasets Scaffolds Average Seq Length
311 223 622 438

Family's Representative Sequence

Representative Sequence 3300046463|Ga0495653_0012782|Ga0495653_0012782_1991_3445
Length 484
Sequence MGLIGPSPVTDFLAVSILASNRTHDLVRAPQTDWKGETMSLIKQEMPVFASDAESAEASVYRKVSWRLLPFLGVLWVLAWLDRVNIGFAKLQMLDSLHFSEAVYGLGAGIFFIGYFLFEVPSNMLLQKIGAKKTIMRITICWGIICMLQTQVNTPTQFYILRFLLGAFEAGFYPGVILYLTYWYPSQRRARAFGTFMSASAIAGVLGGPLAGWIMTSMGGVHGMHGWQWLFIIEGIPSVLAGVFAYFYMTDKPEEAGWLTADEKRVVLDALQRDNAAMGERGHDWRSLFTNRKVWLMIAIFFCLLCANSTLTFWIPTVIKDVGVGTPMAVGWIAALAYLCGAAGMIINGAHSDRSNEVRWHFSGAAIVGGVSMALLAVLMGFDKISPVIALLAMTASLIGTMSAIPVFWQLPNRYLAGSAAAIGVALINSVSNLAGFGAPYVMGLVKNATGKLTTGLYLVAVIEVLAAVLVIIGIRKLGNKQEA

Samples

Sample ID Description Type Environment
1 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
8 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
9 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
12 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
13 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
14 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
15 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
16 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
17 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
18 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
19 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
40 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
59 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
60 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
112 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
115 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
119 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
120 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
121 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
122 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
126 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
127 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
128 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
129 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
130 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
131 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
132 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
133 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
134 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
135 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
136 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
137 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
138 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
139 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
140 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
141 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
142 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
143 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
144 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
145 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
146 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
149 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
150 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
151 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
152 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
153 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
154 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
155 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
156 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
157 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
158 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
159 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
160 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
161 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
162 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
163 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
164 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
165 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
166 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
167 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
168 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
169 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
170 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
171 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
172 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
173 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
174 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
175 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
176 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
177 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
178 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
179 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
180 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
181 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
182 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
183 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
184 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
185 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
186 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
187 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
188 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
189 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
195 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
196 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
197 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
198 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
199 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
200 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
201 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
202 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
203 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
204 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
205 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
206 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
207 2643221736 Bosea sp. Root483D1 Isolate Unclassified
208 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
209 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
210 2855730933 Achromobacter sp. HZ28 Isolate Nodule
211 2855767633 Achromobacter sp. HZ34 Isolate Nodule
212 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
213 2858950400 Achromobacter sp. K91 Isolate Unclassified
214 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
215 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
216 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
217 2901300506 Cupriavidus sp. UYMSc13B Isolate Unclassified
218 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
219 2928058823 Ralstonia sp. 1138 Isolate Unclassified
220 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
221 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
222 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
223 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.96
Metatranscriptomes 0.64
Isolates 7.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.79
Nodule 3.22
Rhizoplane 4.5
Rhizosphere 68.49
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495653_0012782 3300046463 Bacteria 6854
2 JGI24741J21665_1000022 3300001915 Bacteria 37410
3 JGI24740J21852_10033661 3300001979 Bacteria 1624
4 JGI24739J22299_10002100 3300001989 Bacteria 7633
5 JGI24739J22299_10018497 3300001989 Bacteria 2504
6 JGI24737J22298_10001032 3300001990 Bacteria 9862
7 JGI24735J21928_10000646 3300002067 Bacteria 12294
8 JGI25154J39366_1001385 3300002738 Bacteria 8782
9 JGI25159J45721_1006237 3300002987 Bacteria 3603
10 JGI25151J46595_10000550 3300003187 Bacteria 34188
11 JGI25153J46596_10010501 3300003215 Bacteria 4183
12 Ga0006562J51391_1006042 3300003578 Bacteria 4210
13 Ga0055539_1000068 3300003752 Bacteria 134912
14 Ga0055532_1000008 3300003758 Bacteria 404753
15 Ga0055525_1000478 3300003759 Bacteria 21579
16 Ga0055535_1000006 3300003761 Bacteria 404753
17 Ga0055529_1000030 3300003763 Bacteria 272455
18 Ga0055529_1001572 3300003763 Bacteria 6387
19 Ga0055526_1000718 3300003771 Bacteria 25105
20 Ga0055524_1000147 3300003775 Bacteria 83426
21 Ga0055540_1000924 3300003792 Bacteria 19176
22 Ga0065165_1000545 3300005262 Bacteria 56973
23 Ga0065714_10064792 3300005288 Bacteria 18742
24 Ga0070666_10093192 3300005335 Bacteria 2071
25 Ga0070661_100000002 3300005344 Bacteria 265686
26 Ga0070667_100000116 3300005367 Bacteria 102137
27 Ga0070663_100000005 3300005455 Bacteria 251758
28 Ga0070663_100060529 3300005455 Bacteria 2724
29 Ga0068855_100080730 3300005563 Bacteria 3771
30 Ga0070664_100000001 3300005564 Bacteria 551832
31 Ga0068857_100052783 3300005577 Bacteria 3606
32 Ga0068854_100000030 3300005578 Bacteria 111321
33 Ga0068854_100000697 3300005578 Bacteria 19913
34 Ga0068856_100000008 3300005614 Bacteria 190886
35 Ga0068852_100018202 3300005616 Bacteria 5531
36 Ga0068859_100110771 3300005617 Bacteria 2807
37 Ga0068851_10004175 3300005834 Bacteria 6508
38 Ga0068858_100045227 3300005842 Bacteria 4079
39 Ga0075362_10009489 3300006177 Bacteria 3765
40 Ga0075366_10057904 3300006195 Bacteria 2302
41 Ga0075370_10007394 3300006353 Bacteria 5592
42 Ga0097620_100110772 3300006931 Bacteria 2807
43 Ga0105251_10001288 3300009011 Bacteria 21680
44 Ga0105244_10021653 3300009036 Bacteria 3551
45 Ga0105240_10009578 3300009093 Bacteria 13713
46 Ga0105240_10098679 3300009093 Bacteria 3556
47 Ga0105240_10147073 3300009093 Bacteria 2811
48 Ga0105247_10102575 3300009101 Bacteria 1831
49 Ga0114129_10003498 3300009147 Bacteria 22085
50 Ga0105243_10000807 3300009148 Bacteria 29842
51 Ga0105248_10007820 3300009177 Bacteria 11739
52 Ga0105237_10000011 3300009545 Bacteria 307361
53 Ga0105237_10011461 3300009545 Bacteria 9379
54 Ga0105238_10019661 3300009551 Bacteria 6878
55 Ga0105239_10008830 3300010375 Bacteria 11407
56 Ga0157314_1000045 3300012500 Bacteria 12569
57 Ga0157373_10006324 3300013100 Bacteria 8848
58 Ga0157371_10000035 3300013102 Bacteria 223396
59 Ga0157371_10017901 3300013102 Bacteria 5253
60 Ga0157370_10000021 3300013104 Bacteria 166168
61 Ga0157369_10001101 3300013105 Bacteria 33825
62 Ga0157369_10005429 3300013105 Bacteria 14823
63 Ga0157369_10053570 3300013105 Bacteria 4359
64 Ga0157374_10064172 3300013296 Bacteria 3446
65 Ga0163162_10001045 3300013306 Bacteria 25754
66 Ga0157372_10000202 3300013307 Bacteria 65806
67 Ga0157375_10001397 3300013308 Bacteria 20822
68 Ga0182006_1005955 3300015261 Bacteria 5728
69 Ga0183361_10007 3300016635 Bacteria 339575
70 Ga0154015_1576187 3300020610 Bacteria 23748
71 Ga0209784_100014 3300025224 Bacteria 496182
72 Ga0209784_100781 3300025224 Bacteria 7668
73 Ga0209566_100011 3300025225 Bacteria 496182
74 Ga0209566_101073 3300025225 Bacteria 10783
75 Ga0209674_100032 3300025226 Bacteria 426888
76 Ga0209672_100566 3300025228 Bacteria 19646
77 Ga0209147_100002 3300025229 Bacteria 2158988
78 Ga0209563_100029 3300025230 Bacteria 496182
79 Ga0209563_108319 3300025230 Bacteria 1643
80 Ga0209258_100002 3300025242 Bacteria 2158988
81 Ga0209258_102671 3300025242 Bacteria 4395
82 Ga0209677_100081 3300025253 Bacteria 120362
83 Ga0209129_1007093 3300025258 Bacteria 3423
84 Ga0209455_1000009 3300025272 Bacteria 1042273
85 Ga0209455_1000477 3300025272 Bacteria 29930
86 Ga0209673_1008956 3300025273 Bacteria 4398
87 Ga0209130_1000702 3300025284 Bacteria 29997
88 Ga0209675_1004666 3300025291 Bacteria 6017
89 Ga0209025_1000003 3300025294 Bacteria 1366495
90 Ga0209025_1000387 3300025294 Bacteria 91323
91 Ga0209025_1002162 3300025294 Bacteria 21902
92 Ga0209564_1000179 3300025295 Bacteria 151032
93 Ga0209758_1001617 3300025297 Bacteria 25683
94 Ga0209256_1000055 3300025299 Bacteria 295530
95 Ga0207426_1003488 3300025302 Bacteria 8490
96 Ga0207426_1005773 3300025302 Bacteria 5560
97 Ga0207655_1046596 3300025728 Bacteria 1798
98 Ga0207713_1020649 3300025735 Bacteria 3183
99 Ga0207710_10065143 3300025900 Bacteria 1660
100 Ga0207680_10076526 3300025903 Bacteria 2090
101 Ga0207647_10014007 3300025904 Bacteria 5548
102 Ga0207695_10000817 3300025913 Bacteria 57690
103 Ga0207695_10006261 3300025913 Bacteria 15493
104 Ga0207695_10014029 3300025913 Bacteria 9514
105 Ga0207695_10151224 3300025913 Bacteria 2260
106 Ga0207671_10000011 3300025914 Bacteria 530349
107 Ga0207649_10000407 3300025920 Bacteria 31971
108 Ga0207694_10196955 3300025924 Bacteria 1638
109 Ga0207709_10000038 3300025935 Bacteria 266638
110 Ga0207679_10000003 3300025945 Bacteria 597553
111 Ga0207667_10000132 3300025949 Bacteria 114101
112 Ga0207667_10000224 3300025949 Bacteria 79334
113 Ga0207640_10000070 3300025981 Bacteria 80803
114 Ga0207640_10000207 3300025981 Bacteria 41515
115 Ga0207640_10000627 3300025981 Bacteria 20710
116 Ga0207658_10000746 3300025986 Bacteria 27992
117 Ga0207703_10007628 3300026035 Bacteria 8578
118 Ga0207678_10000002 3300026067 Bacteria 371723
119 Ga0207702_10000031 3300026078 Bacteria 175405
120 Ga0207674_10000055 3300026116 Bacteria 114021
121 Ga0207674_10007948 3300026116 Bacteria 12313
122 Ga0207683_10059640 3300026121 Bacteria 3352
123 Ga0307408_100003932 3300031548 Bacteria 10117
124 Ga0307405_10011325 3300031731 Bacteria 4667
125 Ga0307405_10096670 3300031731 Bacteria 1970
126 Ga0307410_10055169 3300031852 Bacteria 2697
127 Ga0307412_10000225 3300031911 Bacteria 37789
128 Ga0307412_10002375 3300031911 Bacteria 10445
129 Ga0307409_100067935 3300031995 Bacteria 2817
130 Ga0307416_100011808 3300032002 Bacteria 5851
131 Ga0395899_0001326 3300037312 Bacteria 21253
132 Ga0395899_0008640 3300037312 Bacteria 7836
133 Ga0395899_0118082 3300037312 Bacteria 1902
134 Ga0395900_0000389 3300037418 Bacteria 63583
135 Ga0395900_0162929 3300037418 Bacteria 2274
136 Ga0395898_0001206 3300037466 Bacteria 39121
137 Ga0395905_0006139 3300037471 Bacteria 12126
138 Ga0395905_0072156 3300037471 Bacteria 3237
139 Ga0395901_0000164 3300038443 Bacteria 86884
140 Ga0395901_0071705 3300038443 Bacteria 3610
141 Ga0436360_0998668 3300039438 Bacteria 8098
142 Ga0436361_0684015 3300039447 Bacteria 12526
143 Ga0436361_0819474 3300039447 Bacteria 1731
144 Ga0436361_1212392 3300039447 Bacteria 1706
145 Ga0439432_004824 3300042006 Bacteria 4894
146 Ga0466969_0022500 3300044656 Bacteria 3253
147 Ga0466972_0001390 3300044658 Bacteria 11735
148 Ga0466961_0000435 3300044693 Bacteria 26633
149 Ga0466961_0014190 3300044693 Bacteria 5112
150 Ga0466964_0036076 3300044706 Bacteria 1980
151 Ga0466970_0000271 3300044765 Bacteria 25244
152 Ga0466959_0002792 3300045049 Bacteria 11241
153 Ga0495617_001083 3300046452 Bacteria 12397
154 Ga0495617_002406 3300046452 Bacteria 7452
155 Ga0495627_000062 3300046453 Bacteria 138772
156 Ga0495603_0000130 3300046455 Bacteria 36862
157 Ga0495590_0000092 3300046457 Bacteria 55212
158 Ga0495590_0001418 3300046457 Bacteria 10382
159 Ga0495590_0006085 3300046457 Bacteria 4734
160 Ga0495590_0021217 3300046457 Bacteria 2303
161 Ga0495591_000016 3300046458 Bacteria 244927
162 Ga0495591_006495 3300046458 Bacteria 5163
163 Ga0495629_0000131 3300046459 Bacteria 65274
164 Ga0495629_0000304 3300046459 Bacteria 42040
165 Ga0495638_0004402 3300046460 Bacteria 10661
166 Ga0495650_0001356 3300046471 Bacteria 24315
167 Ga0495650_0006251 3300046471 Bacteria 7459
168 Ga0495650_0028789 3300046471 Bacteria 2542
169 Ga0495580_0003084 3300046472 Bacteria 14276
170 Ga0495605_0002802 3300046474 Bacteria 10600
171 Ga0495605_0007421 3300046474 Bacteria 6220
172 Ga0495605_0012844 3300046474 Bacteria 4635
173 Ga0495664_0026282 3300046477 Bacteria 3390
174 Ga0495585_0035321 3300046492 Bacteria 2825
175 Ga0495596_0043553 3300046500 Bacteria 1769
176 Ga0495607_0000031 3300046501 Bacteria 153964
177 Ga0495607_0001475 3300046501 Bacteria 20928
178 Ga0495607_0026975 3300046501 Bacteria 3558
179 Ga0495607_0075682 3300046501 Bacteria 1865
180 Ga0495607_0102002 3300046501 Bacteria 1535
181 Ga0495583_0004493 3300046506 Bacteria 9958
182 Ga0495606_0003297 3300046507 Bacteria 17259
183 Ga0495606_0003611 3300046507 Bacteria 16264
184 Ga0495606_0025218 3300046507 Bacteria 4264
185 Ga0495606_0038302 3300046507 Bacteria 3245
186 Ga0495616_0005306 3300046513 Bacteria 7943
187 Ga0495628_0019744 3300046516 Bacteria 5567
188 Ga0495630_0043002 3300046517 Bacteria 3374
189 Ga0495631_0004081 3300046518 Bacteria 7842
190 Ga0495637_0003204 3300046520 Bacteria 8733
191 Ga0495637_0023952 3300046520 Bacteria 2764
192 Ga0495637_0042400 3300046520 Bacteria 1947
193 Ga0495642_0006577 3300046528 Bacteria 4460
194 Ga0495654_0000192 3300046530 Bacteria 59720
195 Ga0495654_0091186 3300046530 Bacteria 1414
196 Ga0495665_0006552 3300046531 Bacteria 6288
197 Ga0495665_0041149 3300046531 Bacteria 2460
198 Ga0495586_0045472 3300046535 Bacteria 2366
199 Ga0495587_0074952 3300046536 Bacteria 1965
200 Ga0495609_0067632 3300046538 Bacteria 1573
201 Ga0495597_0000128 3300046542 Bacteria 68991
202 Ga0495597_0003629 3300046542 Bacteria 8869
203 Ga0495597_0061405 3300046542 Bacteria 1637
204 Ga0495645_0003958 3300046543 Bacteria 10103
205 Ga0495645_0008572 3300046543 Bacteria 7140
206 Ga0495625_0027487 3300046660 Bacteria 4282
207 Ga0495657_0105872 3300046675 Bacteria 1787
208 Ga0495623_0002417 3300046679 Bacteria 12376
209 Ga0495669_0010162 3300046684 Bacteria 3974
210 Ga0495624_0001292 3300046690 Bacteria 19746
211 Ga0495670_0000629 3300046691 Bacteria 16889
212 Ga0495671_0004429 3300046692 Bacteria 8399
213 Ga0495649_0001476 3300046694 Bacteria 17653
214 Ga0495649_0065528 3300046694 Bacteria 1950
215 Ga0495649_0107627 3300046694 Bacteria 1479
216 Ga0495589_0000725 3300046794 Bacteria 21367
217 Ga0495589_0003136 3300046794 Bacteria 9044
218 Ga0495589_0021702 3300046794 Bacteria 3281
219 Ga0495589_0041544 3300046794 Bacteria 2294
220 Ga0495660_0000566 3300046810 Bacteria 29974
221 Ga0495660_0003342 3300046810 Bacteria 9949
222 Ga0495660_0037434 3300046810 Bacteria 2701
223 Ga0495581_0000960 3300047315 Bacteria 15486
224 Ga0495604_0004290 3300047317 Bacteria 11290
225 Ga0495636_0003471 3300047318 Bacteria 6121
226 Ga0495674_0015339 3300047319 Bacteria 7167
227 Ga0495674_0135904 3300047319 Bacteria 2069
228 Ga0495672_0000968 3300047320 Bacteria 29822
229 Ga0495672_0002204 3300047320 Bacteria 18139
230 Ga0495672_0020488 3300047320 Bacteria 4333
231 Ga0495680_0002217 3300047322 Bacteria 20052
232 Ga0495683_0000586 3300047323 Bacteria 27461
233 Ga0495683_0001387 3300047323 Bacteria 16056
234 Ga0495683_0002677 3300047323 Bacteria 10624
235 Ga0495683_0022998 3300047323 Bacteria 3203
236 Ga0495687_000069 3300047443 Bacteria 159852
237 Ga0495687_005795 3300047443 Bacteria 7754
238 Ga0495687_037957 3300047443 Bacteria 2142
239 Ga0495675_0145982 3300047444 Bacteria 1464
240 Ga0495679_001809 3300047446 Bacteria 11639
241 Ga0495673_0003080 3300047469 Bacteria 11207
242 Ga0495593_0000031 3300047673 Bacteria 59051
243 Ga0495593_0000695 3300047673 Bacteria 19421
244 Ga0495602_0000774 3300048088 Bacteria 30508
245 Ga0496100_0006568 3300048903 Bacteria 6351
246 Ga0496101_0074315 3300048904 Bacteria 2499
247 Ga0496101_0105015 3300048904 Bacteria 2119
248 Ga0496102_0053582 3300048905 Bacteria 3677
249 Ga0496102_0171124 3300048905 Bacteria 2045
250 Ga0496103_0004370 3300048906 Bacteria 8583
251 Ga0496104_0080279 3300048907 Bacteria 3110
252 Ga0496106_0014853 3300048909 Bacteria 5759
253 Ga0496107_0002552 3300048910 Bacteria 11872
254 Ga0496110_0030900 3300048913 Bacteria 4619
255 Ga0496111_0131992 3300048914 Bacteria 1848
256 Ga0496113_0029521 3300048916 Bacteria 3961
257 Ga0496115_0178928 3300048918 Bacteria 1754
258 Ga0496116_0000506 3300048919 Bacteria 52861
259 Ga0496116_0010751 3300048919 Bacteria 7639
260 Ga0496116_0019867 3300048919 Bacteria 5126
261 Ga0496116_0035726 3300048919 Bacteria 3487
262 Ga0496117_0017974 3300048920 Bacteria 5885
263 Ga0496118_0011664 3300048921 Bacteria 8546
264 Ga0496121_0001467 3300048924 Bacteria 39734
265 Ga0496121_0082606 3300048924 Bacteria 2539
266 Ga0496124_0019461 3300048927 Bacteria 6317
267 Ga0496124_0021344 3300048927 Bacteria 5968
268 Ga0496124_0042861 3300048927 Bacteria 3893
269 Ga0496125_0000118 3300048928 Bacteria 176551
270 Ga0496125_0000146 3300048928 Bacteria 154919
271 Ga0496125_0003534 3300048928 Bacteria 18842
272 Ga0496125_0021354 3300048928 Bacteria 6042
273 Ga0496126_0073149 3300048929 Bacteria 3048
274 Ga0496126_0087960 3300048929 Bacteria 2738
275 Ga0495682_0001518 3300049460 Bacteria 12303
276 Ga0501033_0005942 3300049570 Bacteria 9582
277 Ga0501034_0000401 3300049571 Bacteria 73167
278 Ga0501038_0089695 3300049574 Bacteria 2578
279 Ga0501047_0072142 3300049581 Bacteria 3323
280 Ga0501035_0135965 3300049822 Bacteria 2140
281 Ga0501035_0213223 3300049822 Bacteria 1651
282 Ga0501044_0001101 3300049823 Bacteria 32137
283 nmdc:mga03683_56738_c1 3300050489 Bacteria 1647
284 nmdc:mga0k408_21260_c1 3300050493 Bacteria 3643
285 nmdc:mga07m45_3913_c1 3300050496 Bacteria 7236
286 nmdc:mga05p37_4852_c1 3300050507 Bacteria 15739
287 Ga0500618_001687 3300053125 Bacteria 9460
288 Ga0501082_0052556 3300060353 Bacteria 3512
289 2513553401 2513237082 Bacteria 8640282
290 2513559672 2513237083 Bacteria 8410967
291 2513952524 2513237150 Bacteria 6553639
292 2514041589 2513237165 Bacteria 6771773
293 2597031892 2596583598 Bacteria 5251611
294 2599446871 2599185178 Bacteria 5365746
295 2644746534 2643221736 Bacteria 6608466
296 2775655781 2775506735 Bacteria 4556596
297 2812321411 2811994871 Bacteria 4497550
298 2855733923 2855730933 Bacteria 7047938
299 2855769513 2855767633 Bacteria 7049357
300 2858690996 2858688981 Bacteria 8184122
301 2858954817 2858950400 Bacteria 6783797
302 2885276019 2885270888 Bacteria 9831543
303 2894027263 2894023352 Bacteria 5167372
304 2900578281 2900577576 Bacteria 5438534
305 2901308282 2901300506 Bacteria 8463898
306 2917705308 2917699015 Bacteria 7043791
307 2928061892 2928058823 Bacteria 5520022
308 2932425408 2932422444 Bacteria 4678430
309 644750861 644736347 Bacteria 6476522
310 8003956483 8003955200 Bacteria 8601927
311 8055306633 8055301274 Bacteria 8587385
312 Ga0495653_0012782
313 JGI24741J21665_1000022
314 JGI24740J21852_10033661
315 JGI24739J22299_10002100
316 JGI24739J22299_10018497
317 JGI24737J22298_10001032
318 JGI24735J21928_10000646
319 JGI25154J39366_1001385
320 JGI25159J45721_1006237
321 JGI25151J46595_10000550
322 JGI25153J46596_10010501
323 Ga0006562J51391_1006042
324 Ga0055539_1000068
325 Ga0055532_1000008
326 Ga0055525_1000478
327 Ga0055535_1000006
328 Ga0055529_1000030
329 Ga0055529_1001572
330 Ga0055526_1000718
331 Ga0055524_1000147
332 Ga0055540_1000924
333 Ga0065165_1000545
334 Ga0065714_10064792
335 Ga0070666_10093192
336 Ga0070661_100000002
337 Ga0070667_100000116
338 Ga0070663_100000005
339 Ga0070663_100060529
340 Ga0068855_100080730
341 Ga0070664_100000001
342 Ga0068857_100052783
343 Ga0068854_100000030
344 Ga0068854_100000697
345 Ga0068856_100000008
346 Ga0068852_100018202
347 Ga0068859_100110771
348 Ga0068851_10004175
349 Ga0068858_100045227
350 Ga0075362_10009489
351 Ga0075366_10057904
352 Ga0075370_10007394
353 Ga0097620_100110772
354 Ga0105251_10001288
355 Ga0105244_10021653
356 Ga0105240_10009578
357 Ga0105240_10098679
358 Ga0105240_10147073
359 Ga0105247_10102575
360 Ga0114129_10003498
361 Ga0105243_10000807
362 Ga0105248_10007820
363 Ga0105237_10000011
364 Ga0105237_10011461
365 Ga0105238_10019661
366 Ga0105239_10008830
367 Ga0157314_1000045
368 Ga0157373_10006324
369 Ga0157371_10000035
370 Ga0157371_10017901
371 Ga0157370_10000021
372 Ga0157369_10001101
373 Ga0157369_10005429
374 Ga0157369_10053570
375 Ga0157374_10064172
376 Ga0163162_10001045
377 Ga0157372_10000202
378 Ga0157375_10001397
379 Ga0182006_1005955
380 Ga0183361_10007
381 Ga0154015_1576187
382 Ga0209784_100014
383 Ga0209784_100781
384 Ga0209566_100011
385 Ga0209566_101073
386 Ga0209674_100032
387 Ga0209672_100566
388 Ga0209147_100002
389 Ga0209563_100029
390 Ga0209563_108319
391 Ga0209258_100002
392 Ga0209258_102671
393 Ga0209677_100081
394 Ga0209129_1007093
395 Ga0209455_1000009
396 Ga0209455_1000477
397 Ga0209673_1008956
398 Ga0209130_1000702
399 Ga0209675_1004666
400 Ga0209025_1000003
401 Ga0209025_1000387
402 Ga0209025_1002162
403 Ga0209564_1000179
404 Ga0209758_1001617
405 Ga0209256_1000055
406 Ga0207426_1003488
407 Ga0207426_1005773
408 Ga0207655_1046596
409 Ga0207713_1020649
410 Ga0207710_10065143
411 Ga0207680_10076526
412 Ga0207647_10014007
413 Ga0207695_10000817
414 Ga0207695_10006261
415 Ga0207695_10014029
416 Ga0207695_10151224
417 Ga0207671_10000011
418 Ga0207649_10000407
419 Ga0207694_10196955
420 Ga0207709_10000038
421 Ga0207679_10000003
422 Ga0207667_10000132
423 Ga0207667_10000224
424 Ga0207640_10000070
425 Ga0207640_10000207
426 Ga0207640_10000627
427 Ga0207658_10000746
428 Ga0207703_10007628
429 Ga0207678_10000002
430 Ga0207702_10000031
431 Ga0207674_10000055
432 Ga0207674_10007948
433 Ga0207683_10059640
434 Ga0307408_100003932
435 Ga0307405_10011325
436 Ga0307405_10096670
437 Ga0307410_10055169
438 Ga0307412_10000225
439 Ga0307412_10002375
440 Ga0307409_100067935
441 Ga0307416_100011808
442 Ga0395899_0001326
443 Ga0395899_0008640
444 Ga0395899_0118082
445 Ga0395900_0000389
446 Ga0395900_0162929
447 Ga0395898_0001206
448 Ga0395905_0006139
449 Ga0395905_0072156
450 Ga0395901_0000164
451 Ga0395901_0071705
452 Ga0436360_0998668
453 Ga0436361_0684015
454 Ga0436361_0819474
455 Ga0436361_1212392
456 Ga0439432_004824
457 Ga0466969_0022500
458 Ga0466972_0001390
459 Ga0466961_0000435
460 Ga0466961_0014190
461 Ga0466964_0036076
462 Ga0466970_0000271
463 Ga0466959_0002792
464 Ga0495617_001083
465 Ga0495617_002406
466 Ga0495627_000062
467 Ga0495603_0000130
468 Ga0495590_0000092
469 Ga0495590_0001418
470 Ga0495590_0006085
471 Ga0495590_0021217
472 Ga0495591_000016
473 Ga0495591_006495
474 Ga0495629_0000131
475 Ga0495629_0000304
476 Ga0495638_0004402
477 Ga0495650_0001356
478 Ga0495650_0006251
479 Ga0495650_0028789
480 Ga0495580_0003084
481 Ga0495605_0002802
482 Ga0495605_0007421
483 Ga0495605_0012844
484 Ga0495664_0026282
485 Ga0495585_0035321
486 Ga0495596_0043553
487 Ga0495607_0000031
488 Ga0495607_0001475
489 Ga0495607_0026975
490 Ga0495607_0075682
491 Ga0495607_0102002
492 Ga0495583_0004493
493 Ga0495606_0003297
494 Ga0495606_0003611
495 Ga0495606_0025218
496 Ga0495606_0038302
497 Ga0495616_0005306
498 Ga0495628_0019744
499 Ga0495630_0043002
500 Ga0495631_0004081
501 Ga0495637_0003204
502 Ga0495637_0023952
503 Ga0495637_0042400
504 Ga0495642_0006577
505 Ga0495654_0000192
506 Ga0495654_0091186
507 Ga0495665_0006552
508 Ga0495665_0041149
509 Ga0495586_0045472
510 Ga0495587_0074952
511 Ga0495609_0067632
512 Ga0495597_0000128
513 Ga0495597_0003629
514 Ga0495597_0061405
515 Ga0495645_0003958
516 Ga0495645_0008572
517 Ga0495625_0027487
518 Ga0495657_0105872
519 Ga0495623_0002417
520 Ga0495669_0010162
521 Ga0495624_0001292
522 Ga0495670_0000629
523 Ga0495671_0004429
524 Ga0495649_0001476
525 Ga0495649_0065528
526 Ga0495649_0107627
527 Ga0495589_0000725
528 Ga0495589_0003136
529 Ga0495589_0021702
530 Ga0495589_0041544
531 Ga0495660_0000566
532 Ga0495660_0003342
533 Ga0495660_0037434
534 Ga0495581_0000960
535 Ga0495604_0004290
536 Ga0495636_0003471
537 Ga0495674_0015339
538 Ga0495674_0135904
539 Ga0495672_0000968
540 Ga0495672_0002204
541 Ga0495672_0020488
542 Ga0495680_0002217
543 Ga0495683_0000586
544 Ga0495683_0001387
545 Ga0495683_0002677
546 Ga0495683_0022998
547 Ga0495687_000069
548 Ga0495687_005795
549 Ga0495687_037957
550 Ga0495675_0145982
551 Ga0495679_001809
552 Ga0495673_0003080
553 Ga0495593_0000031
554 Ga0495593_0000695
555 Ga0495602_0000774
556 Ga0496100_0006568
557 Ga0496101_0074315
558 Ga0496101_0105015
559 Ga0496102_0053582
560 Ga0496102_0171124
561 Ga0496103_0004370
562 Ga0496104_0080279
563 Ga0496106_0014853
564 Ga0496107_0002552
565 Ga0496110_0030900
566 Ga0496111_0131992
567 Ga0496113_0029521
568 Ga0496115_0178928
569 Ga0496116_0000506
570 Ga0496116_0010751
571 Ga0496116_0019867
572 Ga0496116_0035726
573 Ga0496117_0017974
574 Ga0496118_0011664
575 Ga0496121_0001467
576 Ga0496121_0082606
577 Ga0496124_0019461
578 Ga0496124_0021344
579 Ga0496124_0042861
580 Ga0496125_0000118
581 Ga0496125_0000146
582 Ga0496125_0003534
583 Ga0496125_0021354
584 Ga0496126_0073149
585 Ga0496126_0087960
586 Ga0495682_0001518
587 Ga0501033_0005942
588 Ga0501034_0000401
589 Ga0501038_0089695
590 Ga0501047_0072142
591 Ga0501035_0135965
592 Ga0501035_0213223
593 Ga0501044_0001101
594 nmdc:mga03683_56738_c1
595 nmdc:mga0k408_21260_c1
596 nmdc:mga07m45_3913_c1
597 nmdc:mga05p37_4852_c1
598 Ga0500618_001687
599 Ga0501082_0052556
600 2513553401
601 2513559672
602 2513952524
603 2514041589
604 2597031892
605 2599446871
606 2644746534
607 2775655781
608 2812321411
609 2855733923
610 2855769513
611 2858690996
612 2858954817
613 2885276019
614 2894027263
615 2900578281
616 2901308282
617 2917705308
618 2928061892
619 2932425408
620 644750861
621 8003956483
622 8055306633

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

72

440

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dwi-assembly1.cif.gz_A molecular mechanism of sialic acid transport mediated by sialin 0.865 35 435
6e9n-assembly2.cif.gz_B e. coli d-galactonate:proton symporter in the inward open form 0.854 38 435
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.8445 36 436
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.8401 62 438
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.8338 35 436
ID Description Score Start End Superfamily
af_O53919_11_216_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9761 29 233 1.20.1250.20
af_P76470_6_212_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.967 27 232 1.20.1250.20
af_P40445_70_275_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9666 27 221 1.20.1250.20
af_P0AA76_9_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9631 38 231 1.20.1250.20
af_O53919_11_216_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9622 29 233 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A3D5IQY8-F1-model_v4 deleted 0.9613 26 301
AF-A0A0M0EE70-F1-model_v4 Putative metabolite transport protein NicT 0.9525 23 287 GO:0016020
GO:0022857
AF-A0A1Y2CN96-F1-model_v4 MFS general substrate transporter 0.9522 26 241 GO:0016020
GO:0022857
AF-A0A2W5BUW7-F1-model_v4 deleted 0.9491 45 221
AF-A0A3D5IQY8-F1-model_v4 deleted 0.9446 26 301

Map