F401349

General Info

Members Datasets Scaffolds Average Seq Length
311 225 248 232

Family's Representative Sequence

Representative Sequence 3300046453|Ga0495627_000024|Ga0495627_000024_217581_218405
Length 274
Sequence MIVLLRIAAREARPFTAIGTTECARLTGLCAARHLADMSDTIKLDESWRAPLAAQFAAPHMQGLKSFLQAEKAAGKRIFPKGNEYFRALDLTPLDQVKVVILGQDPYHGEGQAHGLCFSVQPGVRTPPSLVNIYKEMETDLGIPRARHGFLEHWAKQGVLLLNSVLTVEMSRAASHQGKGWELFTDAIVRLVAQKDEPVVFLLWGAYAQRKASFVDQSRHLVIKSAHPSPLSAHNGFLGSRPFSKANAFLEAKGRGAIDWALPELDGAQPGLSL

Samples

Sample ID Description Type Environment
1 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
2 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
3 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
4 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
5 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
6 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
7 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
8 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
9 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
10 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
11 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
12 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
13 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
14 2643221568 Rhizobium sp. Root564 Isolate Unclassified
15 2643221582 Rhizobium sp. Root651 Isolate Unclassified
16 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
17 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
18 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
19 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
20 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
21 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
22 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
23 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
24 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
25 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
26 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
27 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
28 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
29 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
30 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
31 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
32 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
33 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
34 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
35 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
36 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
37 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
38 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
39 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
40 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
41 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
42 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
43 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
44 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
45 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
46 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
47 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
48 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
49 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
50 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
51 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
52 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
53 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
54 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
55 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
56 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
57 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
58 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
59 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
60 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
61 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
62 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
63 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
64 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
65 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
66 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
67 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
68 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
69 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
70 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
71 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
72 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
73 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
74 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
75 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
76 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
77 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
78 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
79 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
80 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
81 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
82 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
83 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
84 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
85 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
86 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
87 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
88 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
89 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
90 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
91 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
92 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
93 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
94 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
95 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
96 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
97 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
98 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
99 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
100 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
101 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
102 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
103 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
104 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
105 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
106 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
107 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
108 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
109 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
111 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
112 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
114 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
117 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
118 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
137 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
138 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
140 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
141 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
142 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
143 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
144 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
145 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
146 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
147 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
148 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
149 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
150 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
151 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
152 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
153 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
154 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
155 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
156 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
157 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
158 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
159 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
160 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
161 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
162 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
163 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
164 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
165 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
166 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
167 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
168 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
169 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
170 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
171 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
172 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
173 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
174 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
175 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
176 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
177 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
178 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
179 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
180 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
181 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
182 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
183 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
184 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
185 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
186 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
187 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
188 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
189 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
190 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
191 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
192 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
193 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
194 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
195 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
196 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
197 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
198 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
199 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
200 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
201 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
204 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
205 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
206 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
207 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
208 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
209 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
210 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
211 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
212 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
213 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
214 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
215 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
216 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
217 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
218 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
219 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
220 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
221 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
222 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
223 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
224 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
225 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 79.74
Metatranscriptomes 0
Isolates 20.26

Biome Distribution

Category Percentage (%)
Aerial Root 1.61
Bulb 0
Endosphere 20.58
Nodule 8.04
Rhizoplane 3.22
Rhizosphere 50.16
Stem 0
Stem Tuber 0
Unclassified 16.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10006456 3300002067 Bacteria 3860
2 JGI24735J21928_10013816 3300002067 Bacteria 2533
3 JGI24738J21930_10010889 3300002075 Bacteria 2012
4 JGI25164J39214_1004203 3300002772 Bacteria 1687
5 JGI25151J46595_10018608 3300003187 Bacteria 2976
6 JGI25165J46597_1000023 3300003214 Bacteria 338873
7 JGI25153J46596_10044125 3300003215 Bacteria 1343
8 rootH2_10184143 3300003320 Bacteria 2301
9 rootH1_10036007 3300003323 Bacteria 2495
10 Ga0055529_1016176 3300003763 Bacteria 939
11 Ga0055536_1007944 3300003781 Bacteria 4651
12 Ga0055536_1015105 3300003781 Bacteria 2664
13 Ga0055536_1026058 3300003781 Bacteria 1649
14 Ga0055530_10011208 3300003791 Bacteria 3240
15 Ga0055530_10016719 3300003791 Bacteria 2327
16 Ga0055540_1004869 3300003792 Bacteria 5877
17 Ga0055531_10001841 3300003794 Bacteria 14974
18 Ga0055531_10019490 3300003794 Bacteria 2741
19 Ga0058692_1015418 3300003856 Bacteria 1723
20 Ga0058692_1017194 3300003856 Bacteria 1591
21 Ga0065165_1007902 3300005262 Bacteria 5102
22 Ga0070658_10007520 3300005327 Bacteria 8793
23 Ga0070658_10036226 3300005327 Bacteria 3976
24 Ga0070668_100050235 3300005347 Bacteria 3210
25 Ga0070669_100029524 3300005353 Bacteria 3953
26 Ga0070659_100017336 3300005366 Bacteria 5417
27 Ga0070659_100369897 3300005366 Bacteria 1206
28 Ga0070662_100014518 3300005457 Bacteria 5267
29 Ga0070662_100040634 3300005457 Bacteria 3313
30 Ga0068855_100190083 3300005563 Bacteria 2316
31 Ga0068854_100000874 3300005578 Bacteria 18073
32 Ga0068854_100010640 3300005578 Bacteria 5969
33 Ga0068854_100535769 3300005578 Bacteria 991
34 Ga0068856_100109607 3300005614 Bacteria 2757
35 Ga0068856_100191507 3300005614 Bacteria 2059
36 Ga0068852_100003836 3300005616 Bacteria 10557
37 Ga0068861_100601575 3300005719 Bacteria 1009
38 Ga0068862_100015652 3300005844 Bacteria 6300
39 Ga0075365_10523462 3300006038 Bacteria 838
40 Ga0075368_10000493 3300006042 Bacteria 11695
41 Ga0075363_100007551 3300006048 Bacteria 5008
42 Ga0075364_10111689 3300006051 Bacteria 1824
43 Ga0075364_10379810 3300006051 Bacteria 964
44 Ga0075364_10504598 3300006051 Bacteria 827
45 Ga0075367_10107590 3300006178 Bacteria 1709
46 Ga0075369_10023587 3300006186 Bacteria 2544
47 Ga0075366_10442515 3300006195 Bacteria 801
48 Ga0097621_100039909 3300006237 Bacteria 3772
49 Ga0075370_10006331 3300006353 Bacteria 5944
50 Ga0075370_10031019 3300006353 Bacteria 2983
51 Ga0068871_100018904 3300006358 Bacteria 5250
52 Ga0099826_10000516 3300006948 Bacteria 18977
53 Ga0099826_10009424 3300006948 Bacteria 7293
54 Ga0105240_10001331 3300009093 Bacteria 42512
55 Ga0105240_10020024 3300009093 Bacteria 8932
56 Ga0105240_10034061 3300009093 Bacteria 6574
57 Ga0105240_10410579 3300009093 Bacteria 1523
58 Ga0105241_10132366 3300009174 Bacteria 2021
59 Ga0105237_10006917 3300009545 Bacteria 12510
60 Ga0105237_10087297 3300009545 Bacteria 3109
61 Ga0105237_10567307 3300009545 Bacteria 1142
62 Ga0105238_10190239 3300009551 Bacteria 2028
63 Ga0105239_10000271 3300010375 Bacteria 76812
64 Ga0157373_10031693 3300013100 Bacteria 3805
65 Ga0157373_10566635 3300013100 Bacteria 825
66 Ga0157370_10000611 3300013104 Bacteria 44454
67 Ga0157369_10025348 3300013105 Bacteria 6584
68 Ga0157369_10042009 3300013105 Bacteria 4989
69 Ga0157369_10358556 3300013105 Bacteria 1514
70 Ga0157374_10010349 3300013296 Bacteria 8023
71 Ga0157375_11585968 3300013308 Bacteria 774
72 Ga0183365_10001 3300015684 Bacteria 2090444
73 Ga0163161_10242028 3300017792 Bacteria 1403
74 Ga0209147_100941 3300025229 Bacteria 12845
75 Ga0207427_101779 3300025231 Bacteria 6987
76 Ga0209026_1002697 3300025250 Bacteria 6409
77 Ga0209148_1001740 3300025254 Bacteria 9482
78 Ga0209233_1000003 3300025261 Bacteria 1607366
79 Ga0209455_1000467 3300025272 Bacteria 30363
80 Ga0209676_1005517 3300025292 Bacteria 6574
81 Ga0209676_1015766 3300025292 Bacteria 2765
82 Ga0209025_1000662 3300025294 Bacteria 59654
83 Ga0209758_1000058 3300025297 Bacteria 331603
84 Ga0209050_1011596 3300025298 Bacteria 4154
85 Ga0209050_1021669 3300025298 Bacteria 2334
86 Ga0209051_1008082 3300025303 Bacteria 5629
87 Ga0209257_1001894 3300025304 Bacteria 22612
88 Ga0209257_1003342 3300025304 Bacteria 13875
89 Ga0209257_1013634 3300025304 Bacteria 3588
90 Ga0207647_10030507 3300025904 Bacteria 3476
91 Ga0207647_10081596 3300025904 Bacteria 1938
92 Ga0207705_10000046 3300025909 Bacteria 177574
93 Ga0207705_10002601 3300025909 Bacteria 13872
94 Ga0207695_10004839 3300025913 Bacteria 18183
95 Ga0207695_10012484 3300025913 Bacteria 10195
96 Ga0207695_10063835 3300025913 Bacteria 3794
97 Ga0207671_10001194 3300025914 Bacteria 30831
98 Ga0207671_10042376 3300025914 Bacteria 3369
99 Ga0207671_10079815 3300025914 Bacteria 2452
100 Ga0207690_10182426 3300025932 Bacteria 1581
101 Ga0207690_10263443 3300025932 Bacteria 1336
102 Ga0207706_10212684 3300025933 Bacteria 1694
103 Ga0207679_10560854 3300025945 Bacteria 1026
104 Ga0207668_10009904 3300025972 Bacteria 5731
105 Ga0207640_10000109 3300025981 Bacteria 62407
106 Ga0207640_10007871 3300025981 Bacteria 5880
107 Ga0207639_10018049 3300026041 Bacteria 5006
108 Ga0207678_10003120 3300026067 Bacteria 15000
109 Ga0207678_10267974 3300026067 Bacteria 1464
110 Ga0207702_10005016 3300026078 Bacteria 11632
111 Ga0207702_10032371 3300026078 Bacteria 4364
112 Ga0207683_10468327 3300026121 Bacteria 1162
113 Ga0207698_10000590 3300026142 Bacteria 21162
114 Ga0209371_1000022 3300027312 Bacteria 536342
115 Ga0209282_1000873 3300027666 Bacteria 15618
116 Ga0209282_1052557 3300027666 Bacteria 2324
117 Ga0209813_10000123 3300027866 Bacteria 28104
118 Ga0268265_10017585 3300028380 Bacteria 4938
119 Ga0268256_1000019 3300030500 Bacteria 587949
120 Ga0268256_1004770 3300030500 Bacteria 5511
121 Ga0316181_1096271 3300030744 Bacteria 3549
122 Ga0316576_10092182 3300031727 Bacteria 2258
123 Ga0307409_100123204 3300031995 Bacteria 2200
124 Ga0307409_100367013 3300031995 Bacteria 1364
125 Ga0373941_0222613 3300035115 Bacteria 726
126 Ga0316574_0067256 3300035398 Bacteria 2259
127 Ga0373927_0000048 3300035695 Bacteria 86106
128 Ga0316584_0124265 3300036712 Bacteria 1927
129 Ga0373925_0001079 3300037068 Bacteria 24530
130 Ga0395900_0025899 3300037418 Bacteria 6004
131 Ga0395900_0124987 3300037418 Bacteria 2638
132 Ga0395905_0017429 3300037471 Bacteria 6819
133 Ga0395905_0026212 3300037471 Bacteria 5497
134 Ga0395905_0030742 3300037471 Bacteria 5058
135 Ga0395905_0042672 3300037471 Bacteria 4255
136 Ga0395905_0115345 3300037471 Bacteria 2524
137 Ga0395905_0140635 3300037471 Bacteria 2271
138 Ga0395901_0276395 3300038443 Bacteria 1746
139 Ga0400483_256506 3300039062 Bacteria 5065
140 Ga0439461_0020283 3300041410 Bacteria 1314
141 Ga0439465_0020670 3300041413 Bacteria 2062
142 Ga0451807_1833295 3300041486 Bacteria 797
143 Ga0439431_0006694 3300041997 Bacteria 2555
144 Ga0439457_005840 3300042014 Bacteria 3055
145 Ga0450910_010241 3300042147 Bacteria 1333
146 Ga0439446_0025847 3300042156 Bacteria 1679
147 Ga0466972_0000488 3300044658 Bacteria 19950
148 Ga0466964_0001024 3300044706 Bacteria 9309
149 Ga0466971_0031553 3300044719 Bacteria 2373
150 Ga0466957_0109323 3300044842 Bacteria 1752
151 Ga0466960_0000828 3300044901 Bacteria 10895
152 Ga0466959_0032870 3300045049 Bacteria 3839
153 Ga0466958_0049735 3300045836 Bacteria 2537
154 Ga0495617_018531 3300046452 Bacteria 2353
155 Ga0495627_000024 3300046453 Bacteria 250480
156 Ga0495627_007115 3300046453 Bacteria 4326
157 Ga0495627_008151 3300046453 Bacteria 3947
158 Ga0495627_044636 3300046453 Bacteria 1352
159 Ga0495638_0000207 3300046460 Bacteria 83805
160 Ga0495650_0005733 3300046471 Bacteria 7933
161 Ga0495606_0147539 3300046507 Bacteria 1383
162 Ga0495610_0000153 3300046512 Bacteria 76652
163 Ga0495610_0025346 3300046512 Bacteria 3184
164 Ga0495631_0080961 3300046518 Bacteria 1401
165 Ga0495632_0000076 3300046519 Bacteria 101121
166 Ga0495632_0159687 3300046519 Bacteria 1039
167 Ga0495637_0001873 3300046520 Bacteria 12008
168 Ga0495643_0000009 3300046522 Bacteria 344767
169 Ga0495648_0009492 3300046524 Bacteria 7528
170 Ga0495663_0000023 3300046525 Bacteria 105104
171 Ga0495597_0133202 3300046542 Bacteria 1029
172 Ga0495633_0000102 3300046558 Bacteria 115655
173 Ga0495633_0000397 3300046558 Bacteria 45712
174 Ga0495633_0070906 3300046558 Bacteria 1626
175 Ga0495625_0000275 3300046660 Bacteria 80062
176 Ga0495625_0014127 3300046660 Bacteria 6390
177 Ga0495625_0058901 3300046660 Bacteria 2727
178 Ga0495661_0124779 3300046665 Bacteria 1418
179 Ga0495661_0125637 3300046665 Bacteria 1412
180 Ga0495671_0000013 3300046692 Bacteria 344767
181 Ga0495681_0000015 3300047470 Bacteria 183538
182 Ga0495681_0007888 3300047470 Bacteria 6732
183 Ga0495686_0000600 3300047472 Bacteria 50240
184 Ga0495686_0002745 3300047472 Bacteria 16093
185 Ga0496102_0000010 3300048905 Bacteria 324617
186 Ga0496103_0000029 3300048906 Bacteria 213326
187 Ga0496115_0001451 3300048918 Bacteria 17001
188 Ga0496116_0000105 3300048919 Bacteria 192704
189 Ga0496116_0007603 3300048919 Bacteria 9575
190 Ga0496117_0000037 3300048920 Bacteria 324960
191 Ga0496117_0008993 3300048920 Bacteria 9400
192 Ga0496117_0037205 3300048920 Bacteria 3629
193 Ga0496117_0183215 3300048920 Bacteria 1201
194 Ga0496118_0000034 3300048921 Bacteria 322764
195 Ga0496118_0019051 3300048921 Bacteria 6151
196 Ga0496118_0051008 3300048921 Bacteria 3169
197 Ga0496118_0193445 3300048921 Bacteria 1214
198 Ga0496118_0320422 3300048921 Bacteria 841
199 Ga0496119_0023295 3300048922 Bacteria 4398
200 Ga0496119_0046348 3300048922 Bacteria 2716
201 Ga0496120_0052717 3300048923 Bacteria 2315
202 Ga0496121_0001095 3300048924 Bacteria 47819
203 Ga0496121_0001414 3300048924 Bacteria 40691
204 Ga0496121_0007281 3300048924 Bacteria 13391
205 Ga0496121_0016972 3300048924 Bacteria 7477
206 Ga0496122_0016413 3300048925 Bacteria 7006
207 Ga0496122_0035396 3300048925 Bacteria 4063
208 Ga0496122_0179683 3300048925 Bacteria 1264
209 Ga0496123_0042485 3300048926 Bacteria 3136
210 Ga0496124_0000033 3300048927 Bacteria 330586
211 Ga0496124_0000067 3300048927 Bacteria 222576
212 Ga0496124_0010906 3300048927 Bacteria 9143
213 Ga0496124_0107074 3300048927 Bacteria 2256
214 Ga0496124_0114206 3300048927 Bacteria 2169
215 Ga0496125_0004160 3300048928 Bacteria 16875
216 Ga0496125_0160861 3300048928 Bacteria 1525
217 Ga0496126_0011015 3300048929 Bacteria 9407
218 Ga0495678_101641 3300049459 Bacteria 995
219 Ga0501033_0032120 3300049570 Bacteria 3942
220 Ga0501034_0063508 3300049571 Bacteria 3706
221 Ga0501043_0026088 3300049579 Bacteria 4585
222 Ga0501070_0131010 3300049586 Bacteria 2071
223 Ga0501238_011114 3300049671 Bacteria 1208
224 Ga0501080_0107784 3300049742 Bacteria 2582
225 Ga0501241_003946 3300049758 Bacteria 2791
226 nmdc:mga03n38_28543_c1 3300050490 Bacteria 2327
227 nmdc:mga00v17_35_c1 3300050491 Bacteria 85646
228 nmdc:mga00v17_85564_c1 3300050491 Bacteria 1974
229 nmdc:mga06z11_65_c1 3300050494 Bacteria 43959
230 nmdc:mga06z11_87124_c1 3300050494 Bacteria 1688
231 nmdc:mga04h51_97_c1 3300050495 Bacteria 26416
232 Ga0500643_000364 3300053087 Bacteria 35756
233 Ga0500643_002088 3300053087 Bacteria 10636
234 Ga0500566_0000285 3300053094 Bacteria 27164
235 Ga0500566_0222187 3300053094 Bacteria 938
236 Ga0500572_002671 3300053111 Bacteria 4220
237 Ga0500592_001966 3300053116 Bacteria 3305
238 Ga0500618_000081 3300053125 Bacteria 77777
239 Ga0500626_191331 3300053128 Bacteria 815
240 Ga0500658_0000771 3300053134 Bacteria 13198
241 Ga0500658_0001309 3300053134 Bacteria 10078
242 Ga0500559_0003593 3300053136 Bacteria 7581
243 Ga0500616_0002742 3300053153 Bacteria 14265
244 Ga0500616_0007481 3300053153 Bacteria 6929
245 Ga0500616_0030953 3300053153 Bacteria 2936
246 Ga0500624_000059 3300053157 Bacteria 69605
247 Ga0500636_0000255 3300053177 Bacteria 29384
248 Ga0500636_0002145 3300053177 Bacteria 10897

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041486 Ga0451807_1833295 Ga0451807_1833295_39_728 198
2 3300048925 Ga0496122_0016413 Ga0496122_0016413_5864_6544 221
3 3300031727 Ga0316576_10092182 Ga0316576_100921822 223
4 3300035398 Ga0316574_0067256 Ga0316574_0067256_1090_1761 223
5 3300036712 Ga0316584_0124265 Ga0316584_0124265_193_864 223
6 iso_pu_bacteria 2585427633 2585996904 223
7 iso_pu_bacteria 2808606401 2809064758 224
8 iso_pu_bacteria 2808606404 2809080725 224
9 iso_pu_bacteria 2808606405 2809085090 224
10 iso_pu_bacteria 2880518877 2880521786 224
11 iso_pu_bacteria 2919709256 2919710806 224
12 3300037471 Ga0395905_0026212 Ga0395905_0026212_645_1331 225
13 3300038443 Ga0395901_0276395 Ga0395901_0276395_482_1168 225
14 iso_pu_bacteria 2510917026 2511170847 225
15 iso_pu_bacteria 2512564014 2512643148 225
16 iso_pu_bacteria 2537561587 2537875831 225
17 iso_pu_bacteria 2582581283 2585168134 225
18 iso_pu_bacteria 2582581306 2585269655 225
19 iso_pu_bacteria 2582581865 2585388681 225
20 iso_pu_bacteria 2599185210 2599602007 225
21 iso_pu_bacteria 2599185236 2599722433 225
22 iso_pu_bacteria 2600254933 2600373930 225
23 iso_pu_bacteria 2600255279 2601609738 225
24 iso_pu_bacteria 2600255308 2601746513 225
25 iso_pu_bacteria 2643221568 2643855278 225
26 iso_pu_bacteria 2643221582 2643919999 225
27 iso_pu_bacteria 2643221622 2644125223 225
28 iso_pu_bacteria 2818991439 2819559400 225
29 iso_pu_bacteria 2821123053 2821125982 225
30 iso_pu_bacteria 2838675328 2838675428 225
31 iso_pu_bacteria 2838714209 2838714309 225
32 iso_pu_bacteria 2838719591 2838721889 225
33 iso_pu_bacteria 2838724970 2838725070 225
34 iso_pu_bacteria 2838736955 2838737542 225
35 iso_pu_bacteria 2841840854 2841842089 225
36 iso_pu_bacteria 2841846520 2841848873 225
37 iso_pu_bacteria 2841859092 2841862544 225
38 iso_pu_bacteria 2842124991 2842125096 225
39 iso_pu_bacteria 2842130223 2842130323 225
40 iso_pu_bacteria 2842140634 2842141868 225
41 iso_pu_bacteria 2842152218 2842154507 225
42 iso_pu_bacteria 2842170452 2842170552 225
43 iso_pu_bacteria 2842175837 2842178127 225
44 iso_pu_bacteria 2842187318 2842187418 225
45 iso_pu_bacteria 2842211629 2842211729 225
46 iso_pu_bacteria 2842224351 2842226651 225
47 iso_pu_bacteria 2842515876 2842519328 225
48 iso_pu_bacteria 2857531043 2857532544 225
49 iso_pu_bacteria 2899792073 2899795775 225
50 iso_pu_bacteria 2919114240 2919114340 225
51 iso_pu_bacteria 2919171160 2919173202 225
52 iso_pu_bacteria 2926754445 2926755360 225
53 iso_pu_bacteria 2933006813 2933009152 225
54 iso_pu_bacteria 2933011516 2933014501 225
55 iso_pu_bacteria 2933594066 2933596248 225
56 iso_pu_bacteria 2978969890 2978972088 225
57 iso_pu_bacteria 2979100975 2979104251 225
58 iso_pu_bacteria 2984509177 2984511169 225
59 iso_pu_bacteria 2984518228 2984522469 225
60 iso_pu_bacteria 2984537506 2984541773 225
61 iso_pu_bacteria 2984587000 2984590370 225
62 iso_pu_bacteria 2984601300 2984604128 225
63 iso_pu_bacteria 8003570095 8003571968 225
64 iso_pu_bacteria 8005246636 8005249719 225
65 iso_pu_bacteria 8005658619 8005658686 225
66 iso_pu_bacteria 8054460903 8054463303 225
67 3300009174 Ga0105241_10132366 Ga0105241_101323661 226
68 3300009545 Ga0105237_10567307 Ga0105237_105673072 226
69 3300009551 Ga0105238_10190239 Ga0105238_101902392 226
70 3300005353 Ga0070669_100029524 Ga0070669_1000295243 227
71 3300005366 Ga0070659_100017336 Ga0070659_1000173367 227
72 3300013105 Ga0157369_10358556 Ga0157369_103585562 227
73 3300025932 Ga0207690_10182426 Ga0207690_101824263 227
74 3300035115 Ga0373941_0222613 Ga0373941_0222613_14_706 227
75 3300037471 Ga0395905_0030742 Ga0395905_0030742_1295_1987 227
76 3300048920 Ga0496117_0037205 Ga0496117_0037205_2574_3260 227
77 3300049571 Ga0501034_0063508 Ga0501034_0063508_379_1071 227
78 3300049586 Ga0501070_0131010 Ga0501070_0131010_446_1132 227
79 3300049742 Ga0501080_0107784 Ga0501080_0107784_1780_2466 227
80 iso_pu_bacteria 2599185359 2600227186 227
81 iso_pu_bacteria 2946787523 2946790271 227
82 3300003187 JGI25151J46595_10018608 JGI25151J46595_100186082 228
83 3300003215 JGI25153J46596_10044125 JGI25153J46596_100441252 228
84 3300003320 rootH2_10184143 rootH2_101841431 228
85 3300003323 rootH1_10036007 rootH1_100360074 228
86 3300003781 Ga0055536_1015105 Ga0055536_10151052 228
87 3300003781 Ga0055536_1026058 Ga0055536_10260582 228
88 3300003791 Ga0055530_10011208 Ga0055530_100112082 228
89 3300003792 Ga0055540_1004869 Ga0055540_10048695 228
90 3300003794 Ga0055531_10001841 Ga0055531_1000184111 228
91 3300003856 Ga0058692_1015418 Ga0058692_10154181 228
92 3300003856 Ga0058692_1017194 Ga0058692_10171942 228
93 3300005366 Ga0070659_100369897 Ga0070659_1003698972 228
94 3300005578 Ga0068854_100535769 Ga0068854_1005357691 228
95 3300006038 Ga0075365_10523462 Ga0075365_105234621 228
96 3300006042 Ga0075368_10000493 Ga0075368_100004937 228
97 3300006048 Ga0075363_100007551 Ga0075363_1000075515 228
98 3300006051 Ga0075364_10111689 Ga0075364_101116893 228
99 3300006051 Ga0075364_10379810 Ga0075364_103798101 228
100 3300006051 Ga0075364_10504598 Ga0075364_105045981 228
101 3300006178 Ga0075367_10107590 Ga0075367_101075902 228
102 3300006186 Ga0075369_10023587 Ga0075369_100235872 228
103 3300006353 Ga0075370_10006331 Ga0075370_100063314 228
104 3300006948 Ga0099826_10000516 Ga0099826_100005169 228
105 3300006948 Ga0099826_10009424 Ga0099826_100094242 228
106 3300013100 Ga0157373_10566635 Ga0157373_105666351 228
107 3300013105 Ga0157369_10025348 Ga0157369_100253482 228
108 3300015684 Ga0183365_10001 Ga0183365_100011726 228
109 3300017792 Ga0163161_10242028 Ga0163161_102420282 228
110 3300025229 Ga0209147_100941 Ga0209147_10094110 228
111 3300025292 Ga0209676_1005517 Ga0209676_10055178 228
112 3300025294 Ga0209025_1000662 Ga0209025_100066242 228
113 3300025297 Ga0209758_1000058 Ga0209758_1000058290 228
114 3300025298 Ga0209050_1011596 Ga0209050_10115964 228
115 3300025303 Ga0209051_1008082 Ga0209051_10080825 228
116 3300025304 Ga0209257_1013634 Ga0209257_10136343 228
117 3300027312 Ga0209371_1000022 Ga0209371_1000022423 228
118 3300027666 Ga0209282_1000873 Ga0209282_100087314 228
119 3300027666 Ga0209282_1052557 Ga0209282_10525572 228
120 3300027866 Ga0209813_10000123 Ga0209813_1000012315 228
121 3300030500 Ga0268256_1000019 Ga0268256_100001997 228
122 3300030500 Ga0268256_1004770 Ga0268256_10047702 228
123 3300030744 Ga0316181_1096271 Ga0316181_10962712 228
124 3300031995 Ga0307409_100123204 Ga0307409_1001232042 228
125 3300031995 Ga0307409_100367013 Ga0307409_1003670131 228
126 3300035695 Ga0373927_0000048 Ga0373927_0000048_83710_84399 228
127 3300037068 Ga0373925_0001079 Ga0373925_0001079_1591_2280 228
128 3300037418 Ga0395900_0124987 Ga0395900_0124987_1860_2564 228
129 3300037471 Ga0395905_0042672 Ga0395905_0042672_675_1379 228
130 3300039062 Ga0400483_256506 Ga0400483_256506_4056_4751 228
131 3300044719 Ga0466971_0031553 Ga0466971_0031553_1212_1925 228
132 3300046452 Ga0495617_018531 Ga0495617_018531_1088_1813 228
133 3300046453 Ga0495627_000024 Ga0495627_000024_217581_218405 228
134 3300046453 Ga0495627_007115 Ga0495627_007115_675_1400 228
135 3300046453 Ga0495627_044636 Ga0495627_044636_56_781 228
136 3300046471 Ga0495650_0005733 Ga0495650_0005733_5416_6114 228
137 3300046512 Ga0495610_0000153 Ga0495610_0000153_17416_18141 228
138 3300046512 Ga0495610_0025346 Ga0495610_0025346_1921_2634 228
139 3300046518 Ga0495631_0080961 Ga0495631_0080961_420_1244 228
140 3300046519 Ga0495632_0000076 Ga0495632_0000076_75655_76356 228
141 3300046519 Ga0495632_0159687 Ga0495632_0159687_187_912 228
142 3300046520 Ga0495637_0001873 Ga0495637_0001873_7222_7923 228
143 3300046522 Ga0495643_0000009 Ga0495643_0000009_105152_105853 228
144 3300046524 Ga0495648_0009492 Ga0495648_0009492_4068_4892 228
145 3300046525 Ga0495663_0000023 Ga0495663_0000023_24766_25467 228
146 3300046558 Ga0495633_0000102 Ga0495633_0000102_88360_89061 228
147 3300046558 Ga0495633_0000397 Ga0495633_0000397_34631_35332 228
148 3300046558 Ga0495633_0070906 Ga0495633_0070906_98_823 228
149 3300046660 Ga0495625_0014127 Ga0495625_0014127_4579_5280 228
150 3300046665 Ga0495661_0124779 Ga0495661_0124779_240_965 228
151 3300046692 Ga0495671_0000013 Ga0495671_0000013_105152_105853 228
152 3300047470 Ga0495681_0000015 Ga0495681_0000015_108088_108813 228
153 3300047470 Ga0495681_0007888 Ga0495681_0007888_5853_6554 228
154 3300048919 Ga0496116_0000105 Ga0496116_0000105_5213_5905 228
155 3300048921 Ga0496118_0051008 Ga0496118_0051008_449_1174 228
156 3300048921 Ga0496118_0320422 Ga0496118_0320422_33_725 228
157 3300048922 Ga0496119_0023295 Ga0496119_0023295_82_807 228
158 3300048923 Ga0496120_0052717 Ga0496120_0052717_70_795 228
159 3300048924 Ga0496121_0001095 Ga0496121_0001095_20076_20762 228
160 3300048924 Ga0496121_0016972 Ga0496121_0016972_1202_1894 228
161 3300048925 Ga0496122_0035396 Ga0496122_0035396_1241_1933 228
162 3300048927 Ga0496124_0000067 Ga0496124_0000067_5805_6497 228
163 3300048927 Ga0496124_0114206 Ga0496124_0114206_174_866 228
164 3300048928 Ga0496125_0004160 Ga0496125_0004160_14939_15664 228
165 3300049579 Ga0501043_0026088 Ga0501043_0026088_1946_2665 228
166 3300050490 nmdc:mga03n38_28543_c1 nmdc:mga03n38_28543_c1_241_933 228
167 3300050491 nmdc:mga00v17_35_c1 nmdc:mga00v17_35_c1_55289_55978 228
168 3300050491 nmdc:mga00v17_85564_c1 nmdc:mga00v17_85564_c1_1058_1750 228
169 3300050494 nmdc:mga06z11_65_c1 nmdc:mga06z11_65_c1_8504_9196 228
170 3300050494 nmdc:mga06z11_87124_c1 nmdc:mga06z11_87124_c1_433_1158 228
171 3300050495 nmdc:mga04h51_97_c1 nmdc:mga04h51_97_c1_11421_12113 228
172 3300053111 Ga0500572_002671 Ga0500572_002671_2805_3497 228
173 3300053125 Ga0500618_000081 Ga0500618_000081_45493_46188 228
174 3300053153 Ga0500616_0002742 Ga0500616_0002742_945_1637 228
175 3300053157 Ga0500624_000059 Ga0500624_000059_26210_26902 228
176 3300053177 Ga0500636_0000255 Ga0500636_0000255_330_1022 228
177 3300053177 Ga0500636_0002145 Ga0500636_0002145_1960_2652 228
178 iso_pu_bacteria 2928526807 2928530790 228
179 iso_pu_bacteria 2928968154 2928971136 228
180 3300046453 Ga0495627_008151 Ga0495627_008151_720_1415 229
181 3300046665 Ga0495661_0125637 Ga0495661_0125637_374_1069 229
182 3300053087 Ga0500643_000364 Ga0500643_000364_31689_32381 229
183 3300053087 Ga0500643_002088 Ga0500643_002088_5438_6133 229
184 3300053134 Ga0500658_0000771 Ga0500658_0000771_685_1374 229
185 3300002075 JGI24738J21930_10010889 JGI24738J21930_100108892 231
186 3300005578 Ga0068854_100000874 Ga0068854_10000087412 231
187 3300005578 Ga0068854_100010640 Ga0068854_1000106404 231
188 3300006237 Ga0097621_100039909 Ga0097621_1000399095 231
189 3300006358 Ga0068871_100018904 Ga0068871_1000189044 231
190 3300009093 Ga0105240_10034061 Ga0105240_100340614 231
191 3300009545 Ga0105237_10006917 Ga0105237_1000691713 231
192 3300013100 Ga0157373_10031693 Ga0157373_100316933 231
193 3300013296 Ga0157374_10010349 Ga0157374_100103493 231
194 3300025913 Ga0207695_10063835 Ga0207695_100638354 231
195 3300025914 Ga0207671_10001194 Ga0207671_1000119412 231
196 3300025945 Ga0207679_10560854 Ga0207679_105608541 231
197 3300025981 Ga0207640_10000109 Ga0207640_1000010967 231
198 3300025981 Ga0207640_10007871 Ga0207640_100078716 231
199 3300026041 Ga0207639_10018049 Ga0207639_100180494 231
200 3300026067 Ga0207678_10003120 Ga0207678_100031208 231
201 3300037471 Ga0395905_0017429 Ga0395905_0017429_2971_3666 231
202 3300047472 Ga0495686_0002745 Ga0495686_0002745_15387_16082 231
203 3300048921 Ga0496118_0193445 Ga0496118_0193445_25_729 231
204 3300048924 Ga0496121_0001414 Ga0496121_0001414_36089_36793 231
205 3300048924 Ga0496121_0007281 Ga0496121_0007281_8711_9415 231
206 3300048929 Ga0496126_0011015 Ga0496126_0011015_8580_9284 231
207 3300049570 Ga0501033_0032120 Ga0501033_0032120_3180_3887 231
208 3300053094 Ga0500566_0222187 Ga0500566_0222187_80_775 231
209 3300002067 JGI24735J21928_10006456 JGI24735J21928_100064564 232
210 3300002067 JGI24735J21928_10013816 JGI24735J21928_100138163 232
211 3300002772 JGI25164J39214_1004203 JGI25164J39214_10042032 232
212 3300003214 JGI25165J46597_1000023 JGI25165J46597_1000023251 232
213 3300003763 Ga0055529_1016176 Ga0055529_10161761 232
214 3300003781 Ga0055536_1007944 Ga0055536_10079448 232
215 3300003791 Ga0055530_10016719 Ga0055530_100167193 232
216 3300003794 Ga0055531_10019490 Ga0055531_100194903 232
217 3300005262 Ga0065165_1007902 Ga0065165_10079022 232
218 3300005327 Ga0070658_10007520 Ga0070658_100075206 232
219 3300005327 Ga0070658_10036226 Ga0070658_100362266 232
220 3300005347 Ga0070668_100050235 Ga0070668_1000502351 232
221 3300005457 Ga0070662_100014518 Ga0070662_1000145183 232
222 3300005457 Ga0070662_100040634 Ga0070662_1000406341 232
223 3300005563 Ga0068855_100190083 Ga0068855_1001900832 232
224 3300005614 Ga0068856_100109607 Ga0068856_1001096075 232
225 3300005614 Ga0068856_100191507 Ga0068856_1001915072 232
226 3300005616 Ga0068852_100003836 Ga0068852_1000038364 232
227 3300005719 Ga0068861_100601575 Ga0068861_1006015752 232
228 3300005844 Ga0068862_100015652 Ga0068862_1000156524 232
229 3300006195 Ga0075366_10442515 Ga0075366_104425151 232
230 3300006353 Ga0075370_10031019 Ga0075370_100310191 232
231 3300009093 Ga0105240_10001331 Ga0105240_1000133119 232
232 3300009093 Ga0105240_10020024 Ga0105240_100200245 232
233 3300009093 Ga0105240_10410579 Ga0105240_104105791 232
234 3300009545 Ga0105237_10087297 Ga0105237_100872974 232
235 3300010375 Ga0105239_10000271 Ga0105239_1000027128 232
236 3300013104 Ga0157370_10000611 Ga0157370_1000061116 232
237 3300013105 Ga0157369_10042009 Ga0157369_100420094 232
238 3300013308 Ga0157375_11585968 Ga0157375_115859681 232
239 3300025231 Ga0207427_101779 Ga0207427_1017798 232
240 3300025250 Ga0209026_1002697 Ga0209026_10026974 232
241 3300025254 Ga0209148_1001740 Ga0209148_10017404 232
242 3300025261 Ga0209233_1000003 Ga0209233_10000031089 232
243 3300025272 Ga0209455_1000467 Ga0209455_100046714 232
244 3300025292 Ga0209676_1015766 Ga0209676_10157663 232
245 3300025298 Ga0209050_1021669 Ga0209050_10216692 232
246 3300025304 Ga0209257_1001894 Ga0209257_100189415 232
247 3300025304 Ga0209257_1003342 Ga0209257_10033429 232
248 3300025904 Ga0207647_10030507 Ga0207647_100305073 232
249 3300025904 Ga0207647_10081596 Ga0207647_100815962 232
250 3300025909 Ga0207705_10000046 Ga0207705_10000046153 232
251 3300025909 Ga0207705_10002601 Ga0207705_100026019 232
252 3300025913 Ga0207695_10004839 Ga0207695_1000483914 232
253 3300025913 Ga0207695_10012484 Ga0207695_100124845 232
254 3300025914 Ga0207671_10042376 Ga0207671_100423763 232
255 3300025914 Ga0207671_10079815 Ga0207671_100798152 232
256 3300025932 Ga0207690_10263443 Ga0207690_102634432 232
257 3300025933 Ga0207706_10212684 Ga0207706_102126842 232
258 3300025972 Ga0207668_10009904 Ga0207668_100099046 232
259 3300026067 Ga0207678_10267974 Ga0207678_102679741 232
260 3300026078 Ga0207702_10005016 Ga0207702_100050163 232
261 3300026078 Ga0207702_10032371 Ga0207702_100323714 232
262 3300026121 Ga0207683_10468327 Ga0207683_104683271 232
263 3300026142 Ga0207698_10000590 Ga0207698_100005905 232
264 3300028380 Ga0268265_10017585 Ga0268265_100175856 232
265 3300037418 Ga0395900_0025899 Ga0395900_0025899_2662_3360 232
266 3300037471 Ga0395905_0115345 Ga0395905_0115345_1129_1827 232
267 3300037471 Ga0395905_0140635 Ga0395905_0140635_739_1437 232
268 3300041410 Ga0439461_0020283 Ga0439461_0020283_524_1222 232
269 3300041413 Ga0439465_0020670 Ga0439465_0020670_303_1001 232
270 3300041997 Ga0439431_0006694 Ga0439431_0006694_1658_2356 232
271 3300042014 Ga0439457_005840 Ga0439457_005840_2194_2892 232
272 3300042147 Ga0450910_010241 Ga0450910_010241_42_740 232
273 3300042156 Ga0439446_0025847 Ga0439446_0025847_164_862 232
274 3300044658 Ga0466972_0000488 Ga0466972_0000488_11372_12070 232
275 3300044706 Ga0466964_0001024 Ga0466964_0001024_8529_9227 232
276 3300044842 Ga0466957_0109323 Ga0466957_0109323_204_926 232
277 3300044901 Ga0466960_0000828 Ga0466960_0000828_593_1291 232
278 3300045049 Ga0466959_0032870 Ga0466959_0032870_2277_2975 232
279 3300045836 Ga0466958_0049735 Ga0466958_0049735_181_879 232
280 3300046460 Ga0495638_0000207 Ga0495638_0000207_14409_15110 232
281 3300046507 Ga0495606_0147539 Ga0495606_0147539_217_918 232
282 3300046542 Ga0495597_0133202 Ga0495597_0133202_75_776 232
283 3300046660 Ga0495625_0000275 Ga0495625_0000275_11230_11931 232
284 3300046660 Ga0495625_0058901 Ga0495625_0058901_485_1186 232
285 3300047472 Ga0495686_0000600 Ga0495686_0000600_7519_8229 232
286 3300048905 Ga0496102_0000010 Ga0496102_0000010_118393_119112 232
287 3300048906 Ga0496103_0000029 Ga0496103_0000029_7102_7821 232
288 3300048918 Ga0496115_0001451 Ga0496115_0001451_4389_5087 232
289 3300048919 Ga0496116_0007603 Ga0496116_0007603_5622_6341 232
290 3300048920 Ga0496117_0000037 Ga0496117_0000037_118995_119714 232
291 3300048920 Ga0496117_0008993 Ga0496117_0008993_921_1628 232
292 3300048920 Ga0496117_0183215 Ga0496117_0183215_72_773 232
293 3300048921 Ga0496118_0000034 Ga0496118_0000034_116799_117518 232
294 3300048921 Ga0496118_0019051 Ga0496118_0019051_3981_4688 232
295 3300048922 Ga0496119_0046348 Ga0496119_0046348_997_1716 232
296 3300048925 Ga0496122_0179683 Ga0496122_0179683_192_899 232
297 3300048926 Ga0496123_0042485 Ga0496123_0042485_813_1520 232
298 3300048927 Ga0496124_0000033 Ga0496124_0000033_116799_117518 232
299 3300048927 Ga0496124_0010906 Ga0496124_0010906_1558_2256 232
300 3300048927 Ga0496124_0107074 Ga0496124_0107074_782_1480 232
301 3300048928 Ga0496125_0160861 Ga0496125_0160861_539_1237 232
302 3300049459 Ga0495678_101641 Ga0495678_101641_109_816 232
303 3300049671 Ga0501238_011114 Ga0501238_011114_37_735 232
304 3300049758 Ga0501241_003946 Ga0501241_003946_781_1479 232
305 3300053094 Ga0500566_0000285 Ga0500566_0000285_20348_21046 232
306 3300053116 Ga0500592_001966 Ga0500592_001966_2242_2943 232
307 3300053128 Ga0500626_191331 Ga0500626_191331_32_730 232
308 3300053134 Ga0500658_0001309 Ga0500658_0001309_8427_9128 232
309 3300053136 Ga0500559_0003593 Ga0500559_0003593_3630_4340 232
310 3300053153 Ga0500616_0007481 Ga0500616_0007481_4150_4851 232
311 3300053153 Ga0500616_0030953 Ga0500616_0030953_326_1039 232

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03167

UDG

Uracil DNA glycosylase superfamily

89

251

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fcl-assembly1.cif.gz_A complex of ung2 and a fragment-based designed inhibitor 0.9669 6 227
3zor-assembly1.cif.gz_A structure of bsudg 0.9655 6 231
2jhq-assembly1.cif.gz_A crystal structure of uracil dna-glycosylase from vibrio cholerae 0.9634 10 232
2ssp-assembly1.cif.gz_E leucine-272-alanine uracil-dna glycosylase bound to abasic site-containing dna 0.9626 6 227
3ufm-assembly1.cif.gz_A co-crystal structure of deinococcus radiodurans uracil-dna glycosylase and the c-terminus of the single-stranded dna-binding protein 0.9606 6 232
ID Description Score Start End Superfamily
1okbB00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9592 6 227 3.40.470.10
af_Q8ILU6_89_322_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9567 6 229 3.40.470.10
af_O74834_61_307_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9398 5 226 3.40.470.10
af_Q1ZXM2_175_429_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9386 6 232 3.40.470.10
1okbB00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9342 6 227 3.40.470.10
ID Description Score Start End GO Terms
AF-E8RT99-F1-model_v4 Uracil-DNA glycosylase (UDG) (EC 3.2.2.27) 0.9864 3 231 GO:0004844
GO:0005737
GO:0097510
AF-A0A397P400-F1-model_v4 Uracil-DNA glycosylase (UDG) (EC 3.2.2.27) 0.9855 1 232 GO:0004844
GO:0005737
GO:0097510
AF-A0A520HUW8-F1-model_v4 Uracil-DNA glycosylase (EC 3.2.2.27) 0.9848 22 232 GO:0004844
GO:0005737
GO:0097510
AF-A0A1D2TWY2-F1-model_v4 Uracil-DNA glycosylase (UDG) (EC 3.2.2.27) 0.9819 6 232 GO:0004844
GO:0005737
GO:0097510
AF-C3M915-F1-model_v4 Uracil-DNA glycosylase (UDG) (EC 3.2.2.27) 0.9816 3 232 GO:0004844
GO:0005737
GO:0097510

Feature Viewer

pLDDT pTM Quality
90.91 0.9 High
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Predicted Structure (AlphaFold2)

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