F400466

General Info

Members Datasets Scaffolds Average Seq Length
309 227 618 454

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857542790|2857545735
Length 483
Sequence PASAVATVPPIDAHRSPSHAAVPSLRRGTPVGDDVLHLPVVIVGAGACGLTAALMLSDEHIDCVALERDVVPSGSTALSSGFVPAAGTRVQVAAGIVESPADFAADIRDKTHGTANEPLLQAYTEAIAPALDILQARHGLTFELLDGFLYPGHRVRRMHALPERTGSALMGALQRAADAAGSYVLTQSRVCELWCDEDERITGVGYVRPDGTIERLRCDALVLACNGFGGNAAMVGELLPEMKDAAFGGHTGNDGSAIAWGQALGARLADMGGYQGHGSWAVPQGALISWAIMMAGGIQINARGVRFHDETQGYSEAAVHVLQQPGGIAWNVFDTPLLALGREFPDFCDAERAGAVRECATLEALAALIGCDVSVLEATVADRSDRSDRRALTAPFYAIKVTGALFHTQGGLDIDPDCRVLRTDGTPFPNLLAAGGAARGVSGNAVWGYLSGNGLLSAIAGGFIAARTAAALVAQGTSTGETR

Samples

Sample ID Description Type Environment
1 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
68 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
70 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
117 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
118 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
119 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
123 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
132 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
133 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
134 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
137 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
138 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
139 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
140 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
143 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
144 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
145 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
146 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
147 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
148 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
149 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
150 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
151 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
152 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
153 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
154 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
155 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
156 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
157 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
158 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
163 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
167 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
168 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
169 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
170 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
171 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
172 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
176 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
177 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
178 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
179 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
180 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
181 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
182 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
183 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
186 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
187 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
188 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
189 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
190 2643221569 Achromobacter sp. Root565 Isolate Unclassified
191 2643221570 Acidovorax sp. Root568 Isolate Unclassified
192 2643221594 Achromobacter sp. Root170 Isolate Unclassified
193 2643221596 Acidovorax sp. Root70 Isolate Unclassified
194 2643221609 Acidovorax sp. Root217 Isolate Unclassified
195 2643221611 Acidovorax sp. Root219 Isolate Unclassified
196 2643221621 Achromobacter sp. Root83 Isolate Unclassified
197 2643221652 Acidovorax sp. Root402 Isolate Unclassified
198 2643221683 Variovorax sp. Root473 Isolate Unclassified
199 2738541277 Variovorax sp. GV051 Isolate Unclassified
200 2738541307 Variovorax sp. GV008 Isolate Unclassified
201 2738543012 Acidovorax sp. CF301 Isolate Unclassified
202 2738543013 Variovorax sp. BT01 Isolate Unclassified
203 2738543019 Variovorax sp. GV040 Isolate Unclassified
204 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
205 2816332133 Acidovorax radicis 2721A Isolate Unclassified
206 2818991446 Variovorax sp. 1180 Isolate Unclassified
207 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
208 2842747753 Variovorax sp. R-72060 Isolate Unclassified
209 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
210 2858950400 Achromobacter sp. K91 Isolate Unclassified
211 2899924645 Variovorax sp. 369 Isolate Unclassified
212 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
213 2904456579 Variovorax sp. 2002 Isolate Unclassified
214 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
215 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
216 2928037797 Variovorax sp. 1126 Isolate Unclassified
217 2928044640 Variovorax sp. 1128 Isolate Unclassified
218 2928051484 Variovorax sp. 1133 Isolate Unclassified
219 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
220 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
221 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
222 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
223 2929520902 Variovorax beijingensis 502 Isolate Unclassified
224 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
225 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
226 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
227 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.76
Metatranscriptomes 0.65
Isolates 13.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.95
Nodule 0
Rhizoplane 3.56
Rhizosphere 56.63
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25150J39212_1000471 3300002774 Bacteria 17518
2 JGI25150J39212_1000847 3300002774 Bacteria 10207
3 JGI25151J46595_10006527 3300003187 Bacteria 5848
4 rootL2_10115472 3300003322 Bacteria 5665
5 rootH1_10190914 3300003323 Bacteria 3628
6 Ga0006562J51391_1021001 3300003578 Bacteria 5513
7 Ga0006562J51391_1021002 3300003578 Bacteria 5240
8 Ga0055535_1000139 3300003761 Bacteria 76287
9 Ga0055542_1000091 3300003762 Bacteria 121973
10 Ga0055540_1002107 3300003792 Bacteria 10892
11 Ga0055540_1013879 3300003792 Bacteria 2435
12 Ga0055540_1014433 3300003792 Bacteria 2351
13 Ga0055531_10000665 3300003794 Bacteria 29356
14 Ga0055543_1002047 3300004625 Bacteria 7074
15 Ga0055543_1005500 3300004625 Bacteria 3217
16 Ga0065165_1005631 3300005262 Bacteria 6931
17 Ga0070658_10080882 3300005327 Bacteria 2669
18 Ga0070676_10006972 3300005328 Bacteria 6050
19 Ga0070676_10040902 3300005328 Bacteria 2686
20 Ga0070676_10099806 3300005328 Bacteria 1791
21 Ga0070690_100000494 3300005330 Bacteria 19771
22 Ga0070670_100089405 3300005331 Bacteria 2647
23 Ga0068868_100001842 3300005338 Bacteria 14564
24 Ga0070689_100044323 3300005340 Bacteria 3421
25 Ga0070661_100051126 3300005344 Bacteria 3024
26 Ga0070675_100000138 3300005354 Bacteria 44003
27 Ga0070671_100000521 3300005355 Bacteria 27041
28 Ga0070674_100002826 3300005356 Bacteria 9600
29 Ga0070674_100018079 3300005356 Bacteria 4449
30 Ga0070673_100002254 3300005364 Bacteria 11684
31 Ga0070688_100027711 3300005365 Bacteria 3375
32 Ga0070667_100012818 3300005367 Bacteria 6928
33 Ga0070662_100009670 3300005457 Bacteria 6308
34 Ga0068867_100003974 3300005459 Bacteria 10397
35 Ga0068867_100010741 3300005459 Bacteria 6457
36 Ga0068867_100018410 3300005459 Bacteria 4964
37 Ga0068853_100272736 3300005539 Bacteria 1558
38 Ga0070672_100006965 3300005543 Bacteria 7647
39 Ga0070665_100030576 3300005548 Bacteria 5417
40 Ga0070665_100105337 3300005548 Bacteria 2822
41 Ga0070665_100191660 3300005548 Bacteria 2045
42 Ga0070664_100162705 3300005564 Bacteria 1975
43 Ga0068854_100028800 3300005578 Bacteria 3841
44 Ga0068854_100101974 3300005578 Bacteria 2153
45 Ga0068856_100260334 3300005614 Bacteria 1750
46 Ga0068859_100000133 3300005617 Bacteria 70133
47 Ga0068859_100078152 3300005617 Bacteria 3349
48 Ga0068864_100000237 3300005618 Bacteria 49297
49 Ga0068870_10032127 3300005840 Bacteria 2665
50 Ga0068863_100036569 3300005841 Bacteria 4677
51 Ga0068863_100139633 3300005841 Bacteria 2315
52 Ga0068858_100000395 3300005842 Bacteria 45718
53 Ga0068858_100191372 3300005842 Bacteria 1933
54 Ga0068860_100002977 3300005843 Bacteria 17497
55 Ga0068860_100054431 3300005843 Bacteria 3803
56 Ga0075363_100016109 3300006048 Bacteria 3688
57 Ga0075362_10009256 3300006177 Bacteria 3802
58 Ga0075362_10042371 3300006177 Bacteria 2012
59 Ga0075366_10010848 3300006195 Bacteria 5127
60 Ga0097621_100054003 3300006237 Bacteria 3275
61 Ga0075370_10044798 3300006353 Bacteria 2501
62 Ga0068871_100007221 3300006358 Bacteria 7922
63 Ga0097620_100000133 3300006931 Bacteria 70133
64 Ga0097620_100078150 3300006931 Bacteria 3349
65 Ga0105243_10025093 3300009148 Bacteria 4552
66 Ga0105243_10027180 3300009148 Bacteria 4382
67 Ga0105243_10089700 3300009148 Bacteria 2528
68 Ga0105248_10185381 3300009177 Bacteria 2345
69 Ga0105237_10011769 3300009545 Bacteria 9256
70 Ga0105249_10017444 3300009553 Bacteria 6372
71 Ga0105239_10011813 3300010375 Bacteria 9745
72 Ga0157370_10012075 3300013104 Bacteria 8989
73 Ga0157378_10025416 3300013297 Bacteria 5215
74 Ga0163162_10008602 3300013306 Bacteria 9950
75 Ga0163162_10144511 3300013306 Bacteria 2494
76 Ga0157372_10094349 3300013307 Bacteria 3407
77 Ga0157375_10057069 3300013308 Bacteria 3858
78 Ga0157375_10089846 3300013308 Bacteria 3129
79 Ga0157375_10305733 3300013308 Bacteria 1754
80 Ga0163163_10001897 3300014325 Bacteria 17682
81 Ga0182008_10003633 3300014497 Bacteria 9212
82 Ga0182008_10011055 3300014497 Bacteria 4814
83 Ga0157377_10070707 3300014745 Bacteria 2016
84 Ga0157377_10080540 3300014745 Bacteria 1902
85 Ga0157379_10006912 3300014968 Bacteria 9815
86 Ga0157379_10021378 3300014968 Bacteria 5727
87 Ga0157376_10148895 3300014969 Bacteria 2109
88 Ga0183362_10001 3300015683 Bacteria 2046624
89 Ga0163161_10000329 3300017792 Bacteria 40476
90 Ga0163161_10007763 3300017792 Bacteria 7421
91 Ga0163161_10030038 3300017792 Bacteria 3865
92 Ga0163161_10171894 3300017792 Bacteria 1657
93 Ga0209436_101972 3300025208 Bacteria 6567
94 Ga0209672_100606 3300025228 Bacteria 18700
95 Ga0209147_100720 3300025229 Bacteria 16684
96 Ga0209258_100143 3300025242 Bacteria 165551
97 Ga0207425_1000644 3300025245 Bacteria 19495
98 Ga0209148_1000007 3300025254 Bacteria 1592273
99 Ga0209129_1000084 3300025258 Bacteria 182554
100 Ga0209129_1000986 3300025258 Bacteria 17065
101 Ga0209565_1000779 3300025263 Bacteria 18509
102 Ga0209565_1000928 3300025263 Bacteria 15488
103 Ga0209673_1001520 3300025273 Bacteria 21247
104 Ga0209673_1001700 3300025273 Bacteria 18688
105 Ga0209130_1000323 3300025284 Bacteria 56069
106 Ga0209130_1000897 3300025284 Bacteria 24065
107 Ga0209130_1004788 3300025284 Bacteria 4974
108 Ga0209675_1000628 3300025291 Bacteria 25215
109 Ga0209675_1000843 3300025291 Bacteria 20051
110 Ga0209676_1002949 3300025292 Bacteria 11110
111 Ga0209676_1011387 3300025292 Bacteria 3592
112 Ga0209025_1000521 3300025294 Bacteria 73251
113 Ga0209025_1002165 3300025294 Bacteria 21856
114 Ga0209025_1003272 3300025294 Bacteria 15598
115 Ga0209025_1014981 3300025294 Bacteria 4716
116 Ga0209025_1028457 3300025294 Bacteria 2737
117 Ga0209564_1000108 3300025295 Bacteria 213699
118 Ga0209564_1000357 3300025295 Bacteria 85402
119 Ga0209564_1027333 3300025295 Bacteria 1856
120 Ga0209758_1000184 3300025297 Bacteria 140021
121 Ga0209758_1016565 3300025297 Bacteria 3734
122 Ga0209256_1000101 3300025299 Bacteria 200246
123 Ga0209256_1000156 3300025299 Bacteria 144277
124 Ga0207426_1000049 3300025302 Bacteria 401954
125 Ga0207426_1000086 3300025302 Bacteria 292089
126 Ga0207426_1000351 3300025302 Bacteria 84439
127 Ga0209051_1000208 3300025303 Bacteria 102967
128 Ga0209051_1000430 3300025303 Bacteria 57225
129 Ga0209051_1004257 3300025303 Bacteria 8907
130 Ga0209051_1009757 3300025303 Bacteria 4919
131 Ga0209051_1026822 3300025303 Bacteria 2311
132 Ga0209257_1000012 3300025304 Bacteria 1111138
133 Ga0209257_1002591 3300025304 Bacteria 17558
134 Ga0209257_1008402 3300025304 Bacteria 5881
135 Ga0207697_10003109 3300025315 Bacteria 8300
136 Ga0207682_10001122 3300025893 Bacteria 12373
137 Ga0207680_10000989 3300025903 Bacteria 13407
138 Ga0207645_10011007 3300025907 Bacteria 6190
139 Ga0207645_10083297 3300025907 Bacteria 2051
140 Ga0207645_10109827 3300025907 Bacteria 1785
141 Ga0207643_10020530 3300025908 Bacteria 3626
142 Ga0207662_10042741 3300025918 Bacteria 2672
143 Ga0207650_10001591 3300025925 Bacteria 16208
144 Ga0207659_10000102 3300025926 Bacteria 50407
145 Ga0207687_10202863 3300025927 Bacteria 1551
146 Ga0207644_10028573 3300025931 Bacteria 3862
147 Ga0207644_10045336 3300025931 Bacteria 3128
148 Ga0207706_10029009 3300025933 Bacteria 4940
149 Ga0207686_10027409 3300025934 Bacteria 3337
150 Ga0207709_10003408 3300025935 Bacteria 9494
151 Ga0207670_10038814 3300025936 Bacteria 3113
152 Ga0207669_10005564 3300025937 Bacteria 5668
153 Ga0207669_10074343 3300025937 Bacteria 2148
154 Ga0207704_10011526 3300025938 Bacteria 4355
155 Ga0207691_10022598 3300025940 Bacteria 5930
156 Ga0207691_10056972 3300025940 Bacteria 3559
157 Ga0207691_10114724 3300025940 Bacteria 2393
158 Ga0207711_10146832 3300025941 Bacteria 2125
159 Ga0207689_10013348 3300025942 Bacteria 7010
160 Ga0207651_10010846 3300025960 Bacteria 5070
161 Ga0207640_10123984 3300025981 Bacteria 1856
162 Ga0207658_10002330 3300025986 Bacteria 13956
163 Ga0207703_10001848 3300026035 Bacteria 18842
164 Ga0207639_10241728 3300026041 Bacteria 1570
165 Ga0207702_10223376 3300026078 Bacteria 1756
166 Ga0207641_10107169 3300026088 Bacteria 2471
167 Ga0207648_10003189 3300026089 Bacteria 17281
168 Ga0207648_10003478 3300026089 Bacteria 16506
169 Ga0207648_10106256 3300026089 Bacteria 2463
170 Ga0207676_10002200 3300026095 Bacteria 14066
171 Ga0207675_100009652 3300026118 Bacteria 9030
172 Ga0207675_100048064 3300026118 Bacteria 3983
173 Ga0207675_100275690 3300026118 Bacteria 1633
174 Ga0207683_10006888 3300026121 Bacteria 9731
175 Ga0207683_10011744 3300026121 Bacteria 7473
176 Ga0207698_10059825 3300026142 Bacteria 2960
177 Ga0268266_10297963 3300028379 Bacteria 1503
178 Ga0268265_10075502 3300028380 Bacteria 2640
179 Ga0307515_10000064 3300028794 Bacteria 245452
180 Ga0307515_10105118 3300028794 Bacteria 3365
181 Ga0316181_1082858 3300030744 Bacteria 5932
182 Ga0265327_10000399 3300031251 Bacteria 81304
183 Ga0307513_10117631 3300031456 Bacteria 2635
184 Ga0307513_10187888 3300031456 Bacteria 1921
185 Ga0307408_100033382 3300031548 Bacteria 3595
186 Ga0307406_10001001 3300031901 Bacteria 15685
187 Ga0307412_10000239 3300031911 Bacteria 35877
188 Ga0307412_10139122 3300031911 Bacteria 1775
189 Ga0373923_0049999 3300035111 Bacteria 1750
190 Ga0373955_0114144 3300035172 Bacteria 1564
191 Ga0373937_0009513 3300036401 Bacteria 8451
192 Ga0395899_0004720 3300037312 Bacteria 10633
193 Ga0395900_0015014 3300037418 Bacteria 7895
194 Ga0395900_0029684 3300037418 Bacteria 5610
195 Ga0395898_0015056 3300037466 Bacteria 7939
196 Ga0395901_0012844 3300038443 Bacteria 8495
197 Ga0466957_0034690 3300044842 Bacteria 3026
198 Ga0451576_0037860 3300045051 Bacteria 5108
199 Ga0495627_012962 3300046453 Bacteria 2943
200 Ga0495592_0088538 3300046454 Bacteria 2225
201 Ga0495603_0062102 3300046455 Bacteria 2206
202 Ga0495629_0055213 3300046459 Bacteria 2778
203 Ga0495638_0012258 3300046460 Bacteria 5883
204 Ga0495653_0007836 3300046463 Bacteria 8748
205 Ga0495580_0042658 3300046472 Bacteria 3231
206 Ga0495639_0007404 3300046475 Bacteria 4714
207 Ga0495616_0010945 3300046513 Bacteria 5221
208 Ga0495620_0033433 3300046515 Bacteria 2334
209 Ga0495628_0051426 3300046516 Bacteria 3258
210 Ga0495628_0107423 3300046516 Bacteria 2149
211 Ga0495631_0002687 3300046518 Bacteria 9884
212 Ga0495637_0011213 3300046520 Bacteria 4312
213 Ga0495637_0021642 3300046520 Bacteria 2946
214 Ga0495663_0037093 3300046525 Bacteria 1469
215 Ga0495642_0011180 3300046528 Bacteria 3443
216 Ga0495654_0002659 3300046530 Bacteria 11349
217 Ga0495621_0021285 3300046539 Bacteria 2137
218 Ga0495656_0005665 3300046615 Bacteria 4323
219 Ga0495625_0041317 3300046660 Bacteria 3357
220 Ga0495635_0042828 3300046663 Bacteria 3125
221 Ga0495588_0078598 3300046674 Bacteria 1721
222 Ga0495647_0003857 3300046681 Bacteria 4830
223 Ga0495647_0022012 3300046681 Bacteria 2301
224 Ga0495671_0008317 3300046692 Bacteria 5844
225 Ga0495660_0067546 3300046810 Bacteria 1904
226 Ga0495674_0112612 3300047319 Bacteria 2305
227 Ga0495684_0041701 3300047471 Bacteria 3517
228 Ga0495602_0221060 3300048088 Bacteria 1430
229 Ga0496101_0037092 3300048904 Bacteria 3456
230 Ga0496102_0040446 3300048905 Bacteria 4217
231 Ga0496103_0022469 3300048906 Bacteria 3799
232 Ga0496104_0024023 3300048907 Bacteria 5608
233 Ga0496105_0007454 3300048908 Bacteria 8470
234 Ga0496107_0088263 3300048910 Bacteria 2264
235 Ga0496110_0021930 3300048913 Bacteria 5416
236 Ga0496110_0062864 3300048913 Bacteria 3280
237 Ga0496114_0004974 3300048917 Bacteria 10369
238 Ga0496114_0129265 3300048917 Bacteria 2180
239 Ga0496116_0001877 3300048919 Bacteria 22696
240 Ga0496117_0050454 3300048920 Bacteria 2950
241 Ga0496122_0000033 3300048925 Bacteria 324104
242 Ga0496122_0049858 3300048925 Bacteria 3199
243 Ga0496123_0000884 3300048926 Bacteria 47392
244 Ga0496123_0042247 3300048926 Bacteria 3149
245 Ga0496123_0054454 3300048926 Bacteria 2634
246 Ga0496124_0000004 3300048927 Bacteria 976131
247 Ga0496124_0039454 3300048927 Bacteria 4093
248 Ga0496124_0109950 3300048927 Bacteria 2220
249 Ga0496125_0119186 3300048928 Bacteria 1888
250 Ga0501047_0127971 3300049581 Bacteria 2420
251 Ga0501262_000891 3300049759 Bacteria 3390
252 Ga0501035_0063574 3300049822 Bacteria 3282
253 nmdc:mga03683_4568_c1 3300050489 Bacteria 4607
254 nmdc:mga03683_5860_c2 3300050489 Bacteria 3151
255 nmdc:mga07m45_28073_c1 3300050496 Bacteria 3106
256 Ga0500610_0000256 3300053079 Bacteria 16028
257 Ga0500610_0001326 3300053079 Bacteria 8329
258 Ga0500651_0025168 3300053093 Bacteria 3734
259 Ga0500594_0001406 3300053118 Bacteria 5229
260 Ga0500594_0004091 3300053118 Bacteria 3211
261 Ga0500607_021158 3300053121 Bacteria 3667
262 Ga0500658_0000058 3300053134 Bacteria 55299
263 Ga0500559_0000019 3300053136 Bacteria 134862
264 Ga0500559_0011395 3300053136 Bacteria 3798
265 Ga0500568_0001943 3300053139 Bacteria 12668
266 Ga0500616_0008025 3300053153 Bacteria 6611
267 Ga0500627_0002173 3300053158 Bacteria 5714
268 2857545735 2857542790 Bacteria 5326616
269 2513229509 2513020051 Bacteria 6053213
270 2516024398 2515154189 Bacteria 9629850
271 2599906385 2599185292 Bacteria 6290804
272 2643863133 2643221569 Bacteria 6064337
273 2643865822 2643221570 Bacteria 5103772
274 2643978537 2643221594 Bacteria 5811388
275 2643993115 2643221596 Bacteria 5006805
276 2644060485 2643221609 Bacteria 6756331
277 2644073813 2643221611 Bacteria 6820941
278 2644121656 2643221621 Bacteria 6212786
279 2644294302 2643221652 Bacteria 5140275
280 2644466104 2643221683 Bacteria 5749203
281 2738723035 2738541277 Bacteria 7458140
282 2738882458 2738541307 Bacteria 8606193
283 2739242515 2738543012 Bacteria 7115078
284 2739250664 2738543013 Bacteria 5618633
285 2739283766 2738543019 Bacteria 7459457
286 2809031137 2808606395 Bacteria 6020352
287 2816473163 2816332133 Bacteria 7249298
288 2819602674 2818991446 Bacteria 7757362
289 2831269986 2831265667 Bacteria 7184833
290 2842749822 2842747753 Bacteria 5578255
291 2857542183 2857537821 Bacteria 5248181
292 2858953237 2858950400 Bacteria 6783797
293 2899927096 2899924645 Bacteria 7487985
294 2904454107 2904449895 Bacteria 6927402
295 2904462036 2904456579 Bacteria 6819253
296 2904545967 2904541872 Bacteria 8915136
297 2919465290 2919462493 Bacteria 5817112
298 2928043944 2928037797 Bacteria 7273642
299 2928048592 2928044640 Bacteria 7271509
300 2928054915 2928051484 Bacteria 7773759
301 2928068354 2928064002 Bacteria 7419480
302 2928088366 2928084124 Bacteria 7159212
303 2928117156 2928115317 Bacteria 6477646
304 2929161162 2929160207 Bacteria 9075316
305 2929521838 2929520902 Bacteria 6765052
306 2945914357 2945909444 Bacteria 7065066
307 2945973907 2945972063 Bacteria 6086495
308 2945990248 2945984333 Bacteria 7358892
309 2990712453 2990710928 Bacteria 5002431
310 JGI25150J39212_1000471
311 JGI25150J39212_1000847
312 JGI25151J46595_10006527
313 rootL2_10115472
314 rootH1_10190914
315 Ga0006562J51391_1021001
316 Ga0006562J51391_1021002
317 Ga0055535_1000139
318 Ga0055542_1000091
319 Ga0055540_1002107
320 Ga0055540_1013879
321 Ga0055540_1014433
322 Ga0055531_10000665
323 Ga0055543_1002047
324 Ga0055543_1005500
325 Ga0065165_1005631
326 Ga0070658_10080882
327 Ga0070676_10006972
328 Ga0070676_10040902
329 Ga0070676_10099806
330 Ga0070690_100000494
331 Ga0070670_100089405
332 Ga0068868_100001842
333 Ga0070689_100044323
334 Ga0070661_100051126
335 Ga0070675_100000138
336 Ga0070671_100000521
337 Ga0070674_100002826
338 Ga0070674_100018079
339 Ga0070673_100002254
340 Ga0070688_100027711
341 Ga0070667_100012818
342 Ga0070662_100009670
343 Ga0068867_100003974
344 Ga0068867_100010741
345 Ga0068867_100018410
346 Ga0068853_100272736
347 Ga0070672_100006965
348 Ga0070665_100030576
349 Ga0070665_100105337
350 Ga0070665_100191660
351 Ga0070664_100162705
352 Ga0068854_100028800
353 Ga0068854_100101974
354 Ga0068856_100260334
355 Ga0068859_100000133
356 Ga0068859_100078152
357 Ga0068864_100000237
358 Ga0068870_10032127
359 Ga0068863_100036569
360 Ga0068863_100139633
361 Ga0068858_100000395
362 Ga0068858_100191372
363 Ga0068860_100002977
364 Ga0068860_100054431
365 Ga0075363_100016109
366 Ga0075362_10009256
367 Ga0075362_10042371
368 Ga0075366_10010848
369 Ga0097621_100054003
370 Ga0075370_10044798
371 Ga0068871_100007221
372 Ga0097620_100000133
373 Ga0097620_100078150
374 Ga0105243_10025093
375 Ga0105243_10027180
376 Ga0105243_10089700
377 Ga0105248_10185381
378 Ga0105237_10011769
379 Ga0105249_10017444
380 Ga0105239_10011813
381 Ga0157370_10012075
382 Ga0157378_10025416
383 Ga0163162_10008602
384 Ga0163162_10144511
385 Ga0157372_10094349
386 Ga0157375_10057069
387 Ga0157375_10089846
388 Ga0157375_10305733
389 Ga0163163_10001897
390 Ga0182008_10003633
391 Ga0182008_10011055
392 Ga0157377_10070707
393 Ga0157377_10080540
394 Ga0157379_10006912
395 Ga0157379_10021378
396 Ga0157376_10148895
397 Ga0183362_10001
398 Ga0163161_10000329
399 Ga0163161_10007763
400 Ga0163161_10030038
401 Ga0163161_10171894
402 Ga0209436_101972
403 Ga0209672_100606
404 Ga0209147_100720
405 Ga0209258_100143
406 Ga0207425_1000644
407 Ga0209148_1000007
408 Ga0209129_1000084
409 Ga0209129_1000986
410 Ga0209565_1000779
411 Ga0209565_1000928
412 Ga0209673_1001520
413 Ga0209673_1001700
414 Ga0209130_1000323
415 Ga0209130_1000897
416 Ga0209130_1004788
417 Ga0209675_1000628
418 Ga0209675_1000843
419 Ga0209676_1002949
420 Ga0209676_1011387
421 Ga0209025_1000521
422 Ga0209025_1002165
423 Ga0209025_1003272
424 Ga0209025_1014981
425 Ga0209025_1028457
426 Ga0209564_1000108
427 Ga0209564_1000357
428 Ga0209564_1027333
429 Ga0209758_1000184
430 Ga0209758_1016565
431 Ga0209256_1000101
432 Ga0209256_1000156
433 Ga0207426_1000049
434 Ga0207426_1000086
435 Ga0207426_1000351
436 Ga0209051_1000208
437 Ga0209051_1000430
438 Ga0209051_1004257
439 Ga0209051_1009757
440 Ga0209051_1026822
441 Ga0209257_1000012
442 Ga0209257_1002591
443 Ga0209257_1008402
444 Ga0207697_10003109
445 Ga0207682_10001122
446 Ga0207680_10000989
447 Ga0207645_10011007
448 Ga0207645_10083297
449 Ga0207645_10109827
450 Ga0207643_10020530
451 Ga0207662_10042741
452 Ga0207650_10001591
453 Ga0207659_10000102
454 Ga0207687_10202863
455 Ga0207644_10028573
456 Ga0207644_10045336
457 Ga0207706_10029009
458 Ga0207686_10027409
459 Ga0207709_10003408
460 Ga0207670_10038814
461 Ga0207669_10005564
462 Ga0207669_10074343
463 Ga0207704_10011526
464 Ga0207691_10022598
465 Ga0207691_10056972
466 Ga0207691_10114724
467 Ga0207711_10146832
468 Ga0207689_10013348
469 Ga0207651_10010846
470 Ga0207640_10123984
471 Ga0207658_10002330
472 Ga0207703_10001848
473 Ga0207639_10241728
474 Ga0207702_10223376
475 Ga0207641_10107169
476 Ga0207648_10003189
477 Ga0207648_10003478
478 Ga0207648_10106256
479 Ga0207676_10002200
480 Ga0207675_100009652
481 Ga0207675_100048064
482 Ga0207675_100275690
483 Ga0207683_10006888
484 Ga0207683_10011744
485 Ga0207698_10059825
486 Ga0268266_10297963
487 Ga0268265_10075502
488 Ga0307515_10000064
489 Ga0307515_10105118
490 Ga0316181_1082858
491 Ga0265327_10000399
492 Ga0307513_10117631
493 Ga0307513_10187888
494 Ga0307408_100033382
495 Ga0307406_10001001
496 Ga0307412_10000239
497 Ga0307412_10139122
498 Ga0373923_0049999
499 Ga0373955_0114144
500 Ga0373937_0009513
501 Ga0395899_0004720
502 Ga0395900_0015014
503 Ga0395900_0029684
504 Ga0395898_0015056
505 Ga0395901_0012844
506 Ga0466957_0034690
507 Ga0451576_0037860
508 Ga0495627_012962
509 Ga0495592_0088538
510 Ga0495603_0062102
511 Ga0495629_0055213
512 Ga0495638_0012258
513 Ga0495653_0007836
514 Ga0495580_0042658
515 Ga0495639_0007404
516 Ga0495616_0010945
517 Ga0495620_0033433
518 Ga0495628_0051426
519 Ga0495628_0107423
520 Ga0495631_0002687
521 Ga0495637_0011213
522 Ga0495637_0021642
523 Ga0495663_0037093
524 Ga0495642_0011180
525 Ga0495654_0002659
526 Ga0495621_0021285
527 Ga0495656_0005665
528 Ga0495625_0041317
529 Ga0495635_0042828
530 Ga0495588_0078598
531 Ga0495647_0003857
532 Ga0495647_0022012
533 Ga0495671_0008317
534 Ga0495660_0067546
535 Ga0495674_0112612
536 Ga0495684_0041701
537 Ga0495602_0221060
538 Ga0496101_0037092
539 Ga0496102_0040446
540 Ga0496103_0022469
541 Ga0496104_0024023
542 Ga0496105_0007454
543 Ga0496107_0088263
544 Ga0496110_0021930
545 Ga0496110_0062864
546 Ga0496114_0004974
547 Ga0496114_0129265
548 Ga0496116_0001877
549 Ga0496117_0050454
550 Ga0496122_0000033
551 Ga0496122_0049858
552 Ga0496123_0000884
553 Ga0496123_0042247
554 Ga0496123_0054454
555 Ga0496124_0000004
556 Ga0496124_0039454
557 Ga0496124_0109950
558 Ga0496125_0119186
559 Ga0501047_0127971
560 Ga0501262_000891
561 Ga0501035_0063574
562 nmdc:mga03683_4568_c1
563 nmdc:mga03683_5860_c2
564 nmdc:mga07m45_28073_c1
565 Ga0500610_0000256
566 Ga0500610_0001326
567 Ga0500651_0025168
568 Ga0500594_0001406
569 Ga0500594_0004091
570 Ga0500607_021158
571 Ga0500658_0000058
572 Ga0500559_0000019
573 Ga0500559_0011395
574 Ga0500568_0001943
575 Ga0500616_0008025
576 Ga0500627_0002173
577 2857545735
578 2513229509
579 2516024398
580 2599906385
581 2643863133
582 2643865822
583 2643978537
584 2643993115
585 2644060485
586 2644073813
587 2644121656
588 2644294302
589 2644466104
590 2738723035
591 2738882458
592 2739242515
593 2739250664
594 2739283766
595 2809031137
596 2816473163
597 2819602674
598 2831269986
599 2842749822
600 2857542183
601 2858953237
602 2899927096
603 2904454107
604 2904462036
605 2904545967
606 2919465290
607 2928043944
608 2928048592
609 2928054915
610 2928068354
611 2928088366
612 2928117156
613 2929161162
614 2929521838
615 2945914357
616 2945973907
617 2945990248
618 2990712453

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

39

455

0.89

PF01266

DAO

FAD dependent oxidoreductase

39

250

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
8eef-assembly1.cif.gz_A c. ammoniagenes monoamine oxidase (mao) bound to octopamine 0.9993 22 51
1i8t-assembly1.cif.gz_B structure of udp-galactopyranose mutase from e.coli 0.9569 20 51
4mo2-assembly1.cif.gz_B-2 crystal structure of udp-n-acetylgalactopyranose mutase from campylobacter jejuni 0.9388 20 51
1wam-assembly1.cif.gz_A structure of udp-galactopyranose mutase from klebsiella pneumoniae with fadh- 0.9127 20 51
8jyt-assembly2.cif.gz_B ancestral imine reducatase n560 0.9059 21 50
ID Description Score Start End Superfamily
af_K8F7V7_1826_1944_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9598 22 51 3.50.50.60
af_M9NFH8_1768_1873_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9581 21 51 3.40.50.720
3llvA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9471 20 51 3.40.50.720
4mo2B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9388 20 51 3.40.50.720
2vq3B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9359 21 50 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Q5V3L4-F1-model_v4 deleted 0.9663 2 183
AF-A0A1Q8IYA8-F1-model_v4 3-ketosteroid dehydrogenase 0.9632 14 464 GO:0016491
AF-A0A4Q3N629-F1-model_v4 FAD-dependent oxidoreductase 0.9627 5 468 GO:0016491
AF-A0A261U0G7-F1-model_v4 3-ketosteroid dehydrogenase 0.9616 1 464 GO:0016491
AF-A0A4Q5V3L4-F1-model_v4 deleted 0.961 2 183

Map