F400447

General Info

Members Datasets Scaffolds Average Seq Length
309 175 618 191

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0000005|Ga0500616_0000005_398024_398686
Length 220
Sequence MSESKKSSTTMKPKSLAGKVMATKTVGKSASQQVTSLTSARLKTLYNQEYAKALLKDLGLVNMHQVPKLEKITLNIGLGKAKDDKKLLEVAANTLKKITGQQPVDTVAKLSIASFKLREGNKIGMKVTLRGDRMYEFMDRLINIVLPRLRDFHGVSAKAFDRQGNYALGLTEQSVFPELTFEETTTPHGLQVIFSIKATEPAHARALLEKFGMPFEKEMK

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
60 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
110 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
114 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
115 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
116 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
117 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
118 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
119 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
120 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
121 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
122 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
123 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
124 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
125 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
128 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
129 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
132 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
133 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
134 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
135 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
136 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
137 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
138 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
139 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
149 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
150 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
156 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
157 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
158 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
159 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
160 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
161 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
162 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
163 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
164 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
165 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
166 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
167 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
168 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
169 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
170 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
171 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
172 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
173 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
174 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
175 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.45
Nodule 0
Rhizoplane 0.65
Rhizosphere 80.26
Stem 0
Stem Tuber 0
Unclassified 7.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0000005 3300053153 Bacteria 961725
2 rootH1_10145072 3300003323 Bacteria 1294
3 Ga0058863_11946254 3300004799 Bacteria 1649
4 Ga0070658_10000012 3300005327 Bacteria 277871
5 Ga0070658_10001050 3300005327 Bacteria 23600
6 Ga0070658_10025041 3300005327 Bacteria 4784
7 Ga0070683_100374788 3300005329 Bacteria 1356
8 Ga0070683_100509232 3300005329 Bacteria 1150
9 Ga0070683_100856540 3300005329 Unclassified 872
10 Ga0070670_100208917 3300005331 Bacteria 1697
11 Ga0070680_100061625 3300005336 Bacteria 3071
12 Ga0070680_100137134 3300005336 Bacteria 2050
13 Ga0070680_100162445 3300005336 Bacteria 1877
14 Ga0070680_100190619 3300005336 Unclassified 1727
15 Ga0070680_100616616 3300005336 Unclassified 931
16 Ga0070682_100179179 3300005337 Bacteria 1479
17 Ga0070682_100987881 3300005337 Unclassified 698
18 Ga0070660_100000176 3300005339 Bacteria 42222
19 Ga0070660_100426131 3300005339 Bacteria 1099
20 Ga0070689_100555920 3300005340 Unclassified 989
21 Ga0070691_10037648 3300005341 Bacteria 2283
22 Ga0070692_10100954 3300005345 Bacteria 1581
23 Ga0070674_100061550 3300005356 Bacteria 2620
24 Ga0070673_100000306 3300005364 Bacteria 25711
25 Ga0070673_100025448 3300005364 Bacteria 4356
26 Ga0070659_100000215 3300005366 Bacteria 44375
27 Ga0070667_100458572 3300005367 Unclassified 1165
28 Ga0070709_10202576 3300005434 Bacteria 1406
29 Ga0070714_100000778 3300005435 Bacteria 22615
30 Ga0070714_100392593 3300005435 Bacteria 1310
31 Ga0070714_100916272 3300005435 Bacteria 851
32 Ga0070713_100526882 3300005436 Bacteria 1117
33 Ga0070678_100000168 3300005456 Bacteria 28067
34 Ga0070681_10002189 3300005458 Bacteria 17788
35 Ga0070681_10214486 3300005458 Bacteria 1841
36 Ga0070681_10256878 3300005458 Bacteria 1659
37 Ga0070681_10580990 3300005458 Bacteria 1034
38 Ga0070685_10000188 3300005466 Bacteria 41401
39 Ga0070679_100005719 3300005530 Bacteria 11528
40 Ga0070679_100024441 3300005530 Bacteria 5920
41 Ga0070679_100077724 3300005530 Bacteria 3308
42 Ga0070679_100089181 3300005530 Bacteria 3071
43 Ga0070679_100145363 3300005530 Bacteria 2349
44 Ga0070679_100166710 3300005530 Bacteria 2176
45 Ga0070679_100234077 3300005530 Bacteria 1796
46 Ga0070679_100301518 3300005530 Bacteria 1553
47 Ga0070679_100390729 3300005530 Unclassified 1337
48 Ga0070684_100018123 3300005535 Bacteria 5792
49 Ga0070684_100088596 3300005535 Bacteria 2750
50 Ga0070684_100181238 3300005535 Unclassified 1915
51 Ga0070684_100527260 3300005535 Bacteria 1095
52 Ga0068853_100001273 3300005539 Bacteria 18071
53 Ga0070672_100055954 3300005543 Bacteria 3092
54 Ga0070686_100100808 3300005544 Bacteria 1951
55 Ga0070686_100366061 3300005544 Bacteria 1087
56 Ga0070696_100194163 3300005546 Bacteria 1512
57 Ga0070696_100445980 3300005546 Bacteria 1020
58 Ga0070693_100312315 3300005547 Bacteria 1063
59 Ga0068855_100000003 3300005563 Bacteria 589862
60 Ga0068855_100000168 3300005563 Bacteria 83242
61 Ga0068855_100004673 3300005563 Bacteria 16726
62 Ga0068855_100006349 3300005563 Bacteria 14406
63 Ga0068855_100023229 3300005563 Bacteria 7428
64 Ga0068855_100122011 3300005563 Bacteria 2982
65 Ga0068855_101078715 3300005563 Unclassified 840
66 Ga0068857_100000124 3300005577 Bacteria 46368
67 Ga0068857_100017321 3300005577 Bacteria 6311
68 Ga0068857_100036648 3300005577 Bacteria 4346
69 Ga0068852_100112440 3300005616 Bacteria 2478
70 Ga0068852_100203687 3300005616 Bacteria 1873
71 Ga0068863_100102476 3300005841 Bacteria 2722
72 Ga0068858_100094759 3300005842 Bacteria 2781
73 Ga0068860_100111708 3300005843 Bacteria 2613
74 Ga0068860_100304831 3300005843 Bacteria 1561
75 Ga0068862_100102694 3300005844 Bacteria 2503
76 Ga0075365_10000022 3300006038 Bacteria 64465
77 Ga0075365_10000214 3300006038 Bacteria 19436
78 Ga0075368_10000103 3300006042 Bacteria 21865
79 Ga0075363_100000006 3300006048 Bacteria 47292
80 Ga0075364_10000164 3300006051 Bacteria 29508
81 Ga0075364_10000985 3300006051 Bacteria 15065
82 Ga0075364_10051680 3300006051 Bacteria 2685
83 Ga0075364_10127735 3300006051 Bacteria 1705
84 Ga0070712_101302418 3300006175 Bacteria 633
85 Ga0075367_10000021 3300006178 Bacteria 33969
86 Ga0075367_10332408 3300006178 Unclassified 958
87 Ga0075369_10077510 3300006186 Unclassified 1470
88 Ga0097621_100000003 3300006237 Bacteria 164830
89 Ga0075370_10006085 3300006353 Bacteria 6048
90 Ga0068871_100000013 3300006358 Bacteria 102533
91 Ga0075428_100003149 3300006844 Bacteria 18020
92 Ga0075430_100046838 3300006846 Bacteria 3651
93 Ga0075434_100374415 3300006871 Bacteria 1445
94 Ga0105240_10000099 3300009093 Bacteria 177984
95 Ga0105240_10304295 3300009093 Bacteria 1823
96 Ga0105240_10312692 3300009093 Bacteria 1793
97 Ga0105240_10469812 3300009093 Bacteria 1404
98 Ga0105240_10676893 3300009093 Bacteria 1128
99 Ga0105245_10093563 3300009098 Bacteria 2769
100 Ga0105245_10596011 3300009098 Bacteria 1131
101 Ga0105247_10187043 3300009101 Bacteria 1385
102 Ga0105243_10226682 3300009148 Bacteria 1655
103 Ga0105243_11369730 3300009148 Bacteria 727
104 Ga0105241_10000003 3300009174 Bacteria 839043
105 Ga0105241_10209280 3300009174 Bacteria 1633
106 Ga0105241_10240607 3300009174 Unclassified 1530
107 Ga0105241_11051505 3300009174 Bacteria 764
108 Ga0105242_10013678 3300009176 Bacteria 6277
109 Ga0105248_10113808 3300009177 Bacteria 3051
110 Ga0105237_10027022 3300009545 Bacteria 5861
111 Ga0105238_10237507 3300009551 Bacteria 1800
112 Ga0105238_10418489 3300009551 Bacteria 1334
113 Ga0105032_101879 3300009979 Bacteria 1896
114 Ga0105028_100084 3300009993 Bacteria 9852
115 Ga0105028_100208 3300009993 Bacteria 6426
116 Ga0105239_10032725 3300010375 Bacteria 5713
117 Ga0105239_10075342 3300010375 Bacteria 3710
118 Ga0105239_10112349 3300010375 Bacteria 3021
119 Ga0105246_10534237 3300011119 Bacteria 1002
120 Ga0157371_10009498 3300013102 Bacteria 7652
121 Ga0157370_10082369 3300013104 Bacteria 3026
122 Ga0157370_10126444 3300013104 Bacteria 2386
123 Ga0157370_10253314 3300013104 Bacteria 1628
124 Ga0157369_10003258 3300013105 Bacteria 19325
125 Ga0157369_10062302 3300013105 Bacteria 4020
126 Ga0157369_10123203 3300013105 Bacteria 2750
127 Ga0157374_10001076 3300013296 Bacteria 23646
128 Ga0157374_10064541 3300013296 Bacteria 3436
129 Ga0157378_10044546 3300013297 Bacteria 3940
130 Ga0157372_10026889 3300013307 Bacteria 6264
131 Ga0157372_10057778 3300013307 Bacteria 4337
132 Ga0157372_10133335 3300013307 Bacteria 2860
133 Ga0157372_10290472 3300013307 Bacteria 1901
134 Ga0157372_10713019 3300013307 Bacteria 1167
135 Ga0163163_10053826 3300014325 Bacteria 3974
136 Ga0163163_10575559 3300014325 Bacteria 1189
137 Ga0157377_10008417 3300014745 Bacteria 5029
138 Ga0157379_10062576 3300014968 Bacteria 3328
139 Ga0157376_10000001 3300014969 Bacteria 842910
140 Ga0207647_10054869 3300025904 Bacteria 2450
141 Ga0207699_10365797 3300025906 Bacteria 1021
142 Ga0207705_10000038 3300025909 Bacteria 193812
143 Ga0207705_10006171 3300025909 Bacteria 8914
144 Ga0207705_10031188 3300025909 Bacteria 3803
145 Ga0207654_10000002 3300025911 Bacteria 1460142
146 Ga0207654_10841134 3300025911 Unclassified 664
147 Ga0207707_10003287 3300025912 Bacteria 14366
148 Ga0207707_10032071 3300025912 Bacteria 4599
149 Ga0207707_10215019 3300025912 Bacteria 1674
150 Ga0207707_10283819 3300025912 Bacteria 1433
151 Ga0207695_10000980 3300025913 Bacteria 50757
152 Ga0207695_10223098 3300025913 Bacteria 1791
153 Ga0207695_10296713 3300025913 Bacteria 1508
154 Ga0207671_10054238 3300025914 Bacteria 2970
155 Ga0207660_10011813 3300025917 Bacteria 5693
156 Ga0207660_10045872 3300025917 Bacteria 3081
157 Ga0207660_10131022 3300025917 Bacteria 1909
158 Ga0207660_10504243 3300025917 Bacteria 982
159 Ga0207657_10000804 3300025919 Bacteria 33189
160 Ga0207649_10140780 3300025920 Bacteria 1650
161 Ga0207652_10007578 3300025921 Bacteria 8740
162 Ga0207652_10010927 3300025921 Bacteria 7319
163 Ga0207652_10031666 3300025921 Bacteria 4443
164 Ga0207652_10052851 3300025921 Bacteria 3489
165 Ga0207652_10056559 3300025921 Bacteria 3377
166 Ga0207694_10369919 3300025924 Bacteria 1189
167 Ga0207650_10023267 3300025925 Bacteria 4392
168 Ga0207687_10008644 3300025927 Bacteria 6655
169 Ga0207687_10015188 3300025927 Bacteria 5046
170 Ga0207700_10257926 3300025928 Bacteria 1492
171 Ga0207664_10003229 3300025929 Bacteria 10836
172 Ga0207664_10051819 3300025929 Bacteria 3243
173 Ga0207644_10020573 3300025931 Bacteria 4488
174 Ga0207690_10000521 3300025932 Bacteria 24993
175 Ga0207686_10088578 3300025934 Bacteria 2038
176 Ga0207709_10256442 3300025935 Bacteria 1280
177 Ga0207669_10040466 3300025937 Bacteria 2704
178 Ga0207665_10235812 3300025939 Bacteria 1346
179 Ga0207691_10126313 3300025940 Bacteria 2263
180 Ga0207661_10318259 3300025944 Bacteria 1398
181 Ga0207661_10441959 3300025944 Unclassified 1184
182 Ga0207661_10789619 3300025944 Unclassified 874
183 Ga0207667_10000008 3300025949 Bacteria 625138
184 Ga0207667_10000299 3300025949 Bacteria 68595
185 Ga0207667_10000339 3300025949 Bacteria 64087
186 Ga0207667_10023417 3300025949 Bacteria 6800
187 Ga0207667_10069020 3300025949 Bacteria 3679
188 Ga0207667_10312214 3300025949 Bacteria 1606
189 Ga0207651_10000203 3300025960 Bacteria 25844
190 Ga0207651_10247993 3300025960 Bacteria 1455
191 Ga0207658_10431813 3300025986 Unclassified 1163
192 Ga0207658_10753240 3300025986 Unclassified 882
193 Ga0207703_10084673 3300026035 Bacteria 2652
194 Ga0207639_10001800 3300026041 Bacteria 14423
195 Ga0207641_10074503 3300026088 Bacteria 2928
196 Ga0207674_10000001 3300026116 Bacteria 616581
197 Ga0207674_10012488 3300026116 Bacteria 9490
198 Ga0207674_10066838 3300026116 Bacteria 3620
199 Ga0207683_10002331 3300026121 Bacteria 16657
200 Ga0207698_10072106 3300026142 Bacteria 2744
201 Ga0209999_1072316 3300027543 Bacteria 662
202 Ga0210002_1010970 3300027617 Bacteria 1397
203 Ga0209998_10093683 3300027717 Bacteria 738
204 Ga0209813_10000009 3300027866 Bacteria 102315
205 Ga0209974_10005460 3300027876 Bacteria 4469
206 Ga0268265_10030157 3300028380 Bacteria 3902
207 Ga0268264_10121832 3300028381 Bacteria 2299
208 Ga0268264_10275235 3300028381 Bacteria 1574
209 Ga0265319_1005823 3300028563 Bacteria 5819
210 Ga0265318_10111693 3300028577 Bacteria 1005
211 Ga0265318_10168124 3300028577 Bacteria 804
212 Ga0265338_10000178 3300028800 Bacteria 118345
213 Ga0265338_10003025 3300028800 Bacteria 24237
214 Ga0265338_10006640 3300028800 Bacteria 14651
215 Ga0265338_10008957 3300028800 Bacteria 12038
216 Ga0265338_10009458 3300028800 Bacteria 11616
217 Ga0265338_10035997 3300028800 Bacteria 4746
218 Ga0265338_10043195 3300028800 Bacteria 4184
219 Ga0265338_10142638 3300028800 Bacteria 1874
220 Ga0265338_10390003 3300028800 Bacteria 994
221 Ga0265324_10002972 3300029957 Bacteria 8295
222 Ga0265332_10005731 3300031238 Bacteria 5706
223 Ga0265320_10006089 3300031240 Bacteria 7652
224 Ga0265320_10115375 3300031240 Bacteria 1228
225 Ga0265339_10015627 3300031249 Bacteria 4546
226 Ga0265339_10201255 3300031249 Bacteria 982
227 Ga0265327_10034073 3300031251 Unclassified 2830
228 Ga0265327_10116624 3300031251 Bacteria 1270
229 Ga0265327_10266715 3300031251 Unclassified 759
230 Ga0265316_10101881 3300031344 Bacteria 2181
231 Ga0265316_10178367 3300031344 Bacteria 1582
232 Ga0265316_10271788 3300031344 Bacteria 1240
233 Ga0265316_10301100 3300031344 Bacteria 1168
234 Ga0265314_10075317 3300031711 Bacteria 2246
235 Ga0265314_10360820 3300031711 Bacteria 796
236 Ga0307516_10000021 3300031730 Bacteria 192678
237 Ga0373959_0000077 3300034820 Bacteria 21647
238 Ga0373943_0014308 3300035170 Bacteria 3590
239 Ga0373935_0097171 3300035692 Bacteria 1937
240 Ga0373947_0031701 3300035725 Bacteria 3112
241 Ga0395900_0007425 3300037418 Bacteria 11327
242 Ga0395900_0230270 3300037418 Bacteria 1864
243 Ga0395898_0043059 3300037466 Bacteria 4449
244 Ga0395898_0334575 3300037466 Bacteria 1444
245 Ga0395901_0345584 3300038443 Bacteria 1536
246 Ga0395901_0503058 3300038443 Bacteria 1233
247 Ga0451797_0847966 3300041453 Unclassified 643
248 Ga0439442_003194 3300042002 Bacteria 3242
249 Ga0466965_0010755 3300044683 Bacteria 4279
250 Ga0466966_0124884 3300044684 Bacteria 1579
251 Ga0466958_0271000 3300045836 Bacteria 1087
252 Ga0495590_0257374 3300046457 Bacteria 650
253 Ga0495583_0018179 3300046506 Bacteria 3707
254 Ga0495660_0088317 3300046810 Bacteria 1615
255 Ga0495672_0000016 3300047320 Bacteria 500601
256 Ga0495672_0008723 3300047320 Bacteria 7434
257 Ga0495672_0178980 3300047320 Bacteria 1075
258 Ga0496112_0558644 3300048915 Bacteria 1078
259 Ga0501034_0001193 3300049571 Bacteria 35732
260 Ga0501046_0387001 3300049580 Unclassified 1011
261 Ga0501070_0060657 3300049586 Bacteria 3135
262 Ga0501080_0030200 3300049742 Bacteria 5049
263 nmdc:mga03n38_19_c1 3300050490 Bacteria 41192
264 nmdc:mga00v17_1085_c1 3300050491 Bacteria 14334
265 nmdc:mga00v17_23699_c1 3300050491 Bacteria 3553
266 nmdc:mga00v17_43799_c1 3300050491 Bacteria 2697
267 nmdc:mga00v17_857_c1 3300050491 Bacteria 16451
268 nmdc:mga0yw44_184_c1 3300050492 Bacteria 21563
269 nmdc:mga0yw44_24_c1 3300050492 Bacteria 63201
270 nmdc:mga0yw44_35802_c1 3300050492 Bacteria 2920
271 nmdc:mga0k408_37326_c1 3300050493 Bacteria 2085
272 nmdc:mga06z11_146582_c1 3300050494 Bacteria 1338
273 nmdc:mga06z11_14_c1 3300050494 Bacteria 96662
274 nmdc:mga04h51_10_c1 3300050495 Bacteria 102434
275 nmdc:mga0qj67_29906_c1 3300050509 Bacteria 4234
276 nmdc:mga08y16_21258_c1 3300050511 Bacteria 6852
277 nmdc:mga0n895_302633_c1 3300050512 Bacteria 1621
278 nmdc:mga08x19_312002_c1 3300050514 Bacteria 1093
279 nmdc:mga0sz30_30554_c1 3300050516 Bacteria 2225
280 Ga0500643_000011 3300053087 Bacteria 385630
281 Ga0500644_0001805 3300053088 Bacteria 5534
282 Ga0500644_0011622 3300053088 Bacteria 2412
283 Ga0500644_0019854 3300053088 Bacteria 1989
284 Ga0500644_0029840 3300053088 Bacteria 1719
285 Ga0500646_0000823 3300053090 Bacteria 8581
286 Ga0500646_0014764 3300053090 Bacteria 2029
287 Ga0500583_0015393 3300053092 Bacteria 3024
288 Ga0500651_0000203 3300053093 Bacteria 37688
289 Ga0500651_0000416 3300053093 Bacteria 22899
290 Ga0500650_0000001 3300053098 Bacteria 818797
291 Ga0500555_000002 3300053103 Bacteria 1314346
292 Ga0500555_022461 3300053103 Bacteria 1812
293 Ga0500562_000001 3300053108 Bacteria 1178987
294 Ga0500562_004964 3300053108 Bacteria 3353
295 Ga0500593_000001 3300053117 Bacteria 784404
296 Ga0500594_0000001 3300053118 Bacteria 1178472
297 Ga0500594_0000139 3300053118 Bacteria 20048
298 Ga0500614_002410 3300053123 Bacteria 4177
299 Ga0500628_000006 3300053129 Bacteria 154858
300 Ga0500628_000077 3300053129 Bacteria 24691
301 Ga0500652_000084 3300053131 Bacteria 39562
302 Ga0500655_001993 3300053133 Bacteria 3793
303 Ga0500655_003268 3300053133 Bacteria 2932
304 Ga0500568_0014440 3300053139 Bacteria 3566
305 Ga0500577_0021093 3300053142 Bacteria 2142
306 Ga0500579_016957 3300053143 Bacteria 4707
307 Ga0500589_099901 3300053147 Unclassified 1262
308 Ga0500604_0006456 3300053151 Bacteria 3103
309 Ga0500633_0014746 3300053160 Bacteria 2225
310 Ga0500616_0000005
311 rootH1_10145072
312 Ga0058863_11946254
313 Ga0070658_10000012
314 Ga0070658_10001050
315 Ga0070658_10025041
316 Ga0070683_100374788
317 Ga0070683_100509232
318 Ga0070683_100856540
319 Ga0070670_100208917
320 Ga0070680_100061625
321 Ga0070680_100137134
322 Ga0070680_100162445
323 Ga0070680_100190619
324 Ga0070680_100616616
325 Ga0070682_100179179
326 Ga0070682_100987881
327 Ga0070660_100000176
328 Ga0070660_100426131
329 Ga0070689_100555920
330 Ga0070691_10037648
331 Ga0070692_10100954
332 Ga0070674_100061550
333 Ga0070673_100000306
334 Ga0070673_100025448
335 Ga0070659_100000215
336 Ga0070667_100458572
337 Ga0070709_10202576
338 Ga0070714_100000778
339 Ga0070714_100392593
340 Ga0070714_100916272
341 Ga0070713_100526882
342 Ga0070678_100000168
343 Ga0070681_10002189
344 Ga0070681_10214486
345 Ga0070681_10256878
346 Ga0070681_10580990
347 Ga0070685_10000188
348 Ga0070679_100005719
349 Ga0070679_100024441
350 Ga0070679_100077724
351 Ga0070679_100089181
352 Ga0070679_100145363
353 Ga0070679_100166710
354 Ga0070679_100234077
355 Ga0070679_100301518
356 Ga0070679_100390729
357 Ga0070684_100018123
358 Ga0070684_100088596
359 Ga0070684_100181238
360 Ga0070684_100527260
361 Ga0068853_100001273
362 Ga0070672_100055954
363 Ga0070686_100100808
364 Ga0070686_100366061
365 Ga0070696_100194163
366 Ga0070696_100445980
367 Ga0070693_100312315
368 Ga0068855_100000003
369 Ga0068855_100000168
370 Ga0068855_100004673
371 Ga0068855_100006349
372 Ga0068855_100023229
373 Ga0068855_100122011
374 Ga0068855_101078715
375 Ga0068857_100000124
376 Ga0068857_100017321
377 Ga0068857_100036648
378 Ga0068852_100112440
379 Ga0068852_100203687
380 Ga0068863_100102476
381 Ga0068858_100094759
382 Ga0068860_100111708
383 Ga0068860_100304831
384 Ga0068862_100102694
385 Ga0075365_10000022
386 Ga0075365_10000214
387 Ga0075368_10000103
388 Ga0075363_100000006
389 Ga0075364_10000164
390 Ga0075364_10000985
391 Ga0075364_10051680
392 Ga0075364_10127735
393 Ga0070712_101302418
394 Ga0075367_10000021
395 Ga0075367_10332408
396 Ga0075369_10077510
397 Ga0097621_100000003
398 Ga0075370_10006085
399 Ga0068871_100000013
400 Ga0075428_100003149
401 Ga0075430_100046838
402 Ga0075434_100374415
403 Ga0105240_10000099
404 Ga0105240_10304295
405 Ga0105240_10312692
406 Ga0105240_10469812
407 Ga0105240_10676893
408 Ga0105245_10093563
409 Ga0105245_10596011
410 Ga0105247_10187043
411 Ga0105243_10226682
412 Ga0105243_11369730
413 Ga0105241_10000003
414 Ga0105241_10209280
415 Ga0105241_10240607
416 Ga0105241_11051505
417 Ga0105242_10013678
418 Ga0105248_10113808
419 Ga0105237_10027022
420 Ga0105238_10237507
421 Ga0105238_10418489
422 Ga0105032_101879
423 Ga0105028_100084
424 Ga0105028_100208
425 Ga0105239_10032725
426 Ga0105239_10075342
427 Ga0105239_10112349
428 Ga0105246_10534237
429 Ga0157371_10009498
430 Ga0157370_10082369
431 Ga0157370_10126444
432 Ga0157370_10253314
433 Ga0157369_10003258
434 Ga0157369_10062302
435 Ga0157369_10123203
436 Ga0157374_10001076
437 Ga0157374_10064541
438 Ga0157378_10044546
439 Ga0157372_10026889
440 Ga0157372_10057778
441 Ga0157372_10133335
442 Ga0157372_10290472
443 Ga0157372_10713019
444 Ga0163163_10053826
445 Ga0163163_10575559
446 Ga0157377_10008417
447 Ga0157379_10062576
448 Ga0157376_10000001
449 Ga0207647_10054869
450 Ga0207699_10365797
451 Ga0207705_10000038
452 Ga0207705_10006171
453 Ga0207705_10031188
454 Ga0207654_10000002
455 Ga0207654_10841134
456 Ga0207707_10003287
457 Ga0207707_10032071
458 Ga0207707_10215019
459 Ga0207707_10283819
460 Ga0207695_10000980
461 Ga0207695_10223098
462 Ga0207695_10296713
463 Ga0207671_10054238
464 Ga0207660_10011813
465 Ga0207660_10045872
466 Ga0207660_10131022
467 Ga0207660_10504243
468 Ga0207657_10000804
469 Ga0207649_10140780
470 Ga0207652_10007578
471 Ga0207652_10010927
472 Ga0207652_10031666
473 Ga0207652_10052851
474 Ga0207652_10056559
475 Ga0207694_10369919
476 Ga0207650_10023267
477 Ga0207687_10008644
478 Ga0207687_10015188
479 Ga0207700_10257926
480 Ga0207664_10003229
481 Ga0207664_10051819
482 Ga0207644_10020573
483 Ga0207690_10000521
484 Ga0207686_10088578
485 Ga0207709_10256442
486 Ga0207669_10040466
487 Ga0207665_10235812
488 Ga0207691_10126313
489 Ga0207661_10318259
490 Ga0207661_10441959
491 Ga0207661_10789619
492 Ga0207667_10000008
493 Ga0207667_10000299
494 Ga0207667_10000339
495 Ga0207667_10023417
496 Ga0207667_10069020
497 Ga0207667_10312214
498 Ga0207651_10000203
499 Ga0207651_10247993
500 Ga0207658_10431813
501 Ga0207658_10753240
502 Ga0207703_10084673
503 Ga0207639_10001800
504 Ga0207641_10074503
505 Ga0207674_10000001
506 Ga0207674_10012488
507 Ga0207674_10066838
508 Ga0207683_10002331
509 Ga0207698_10072106
510 Ga0209999_1072316
511 Ga0210002_1010970
512 Ga0209998_10093683
513 Ga0209813_10000009
514 Ga0209974_10005460
515 Ga0268265_10030157
516 Ga0268264_10121832
517 Ga0268264_10275235
518 Ga0265319_1005823
519 Ga0265318_10111693
520 Ga0265318_10168124
521 Ga0265338_10000178
522 Ga0265338_10003025
523 Ga0265338_10006640
524 Ga0265338_10008957
525 Ga0265338_10009458
526 Ga0265338_10035997
527 Ga0265338_10043195
528 Ga0265338_10142638
529 Ga0265338_10390003
530 Ga0265324_10002972
531 Ga0265332_10005731
532 Ga0265320_10006089
533 Ga0265320_10115375
534 Ga0265339_10015627
535 Ga0265339_10201255
536 Ga0265327_10034073
537 Ga0265327_10116624
538 Ga0265327_10266715
539 Ga0265316_10101881
540 Ga0265316_10178367
541 Ga0265316_10271788
542 Ga0265316_10301100
543 Ga0265314_10075317
544 Ga0265314_10360820
545 Ga0307516_10000021
546 Ga0373959_0000077
547 Ga0373943_0014308
548 Ga0373935_0097171
549 Ga0373947_0031701
550 Ga0395900_0007425
551 Ga0395900_0230270
552 Ga0395898_0043059
553 Ga0395898_0334575
554 Ga0395901_0345584
555 Ga0395901_0503058
556 Ga0451797_0847966
557 Ga0439442_003194
558 Ga0466965_0010755
559 Ga0466966_0124884
560 Ga0466958_0271000
561 Ga0495590_0257374
562 Ga0495583_0018179
563 Ga0495660_0088317
564 Ga0495672_0000016
565 Ga0495672_0008723
566 Ga0495672_0178980
567 Ga0496112_0558644
568 Ga0501034_0001193
569 Ga0501046_0387001
570 Ga0501070_0060657
571 Ga0501080_0030200
572 nmdc:mga03n38_19_c1
573 nmdc:mga00v17_1085_c1
574 nmdc:mga00v17_23699_c1
575 nmdc:mga00v17_43799_c1
576 nmdc:mga00v17_857_c1
577 nmdc:mga0yw44_184_c1
578 nmdc:mga0yw44_24_c1
579 nmdc:mga0yw44_35802_c1
580 nmdc:mga0k408_37326_c1
581 nmdc:mga06z11_146582_c1
582 nmdc:mga06z11_14_c1
583 nmdc:mga04h51_10_c1
584 nmdc:mga0qj67_29906_c1
585 nmdc:mga08y16_21258_c1
586 nmdc:mga0n895_302633_c1
587 nmdc:mga08x19_312002_c1
588 nmdc:mga0sz30_30554_c1
589 Ga0500643_000011
590 Ga0500644_0001805
591 Ga0500644_0011622
592 Ga0500644_0019854
593 Ga0500644_0029840
594 Ga0500646_0000823
595 Ga0500646_0014764
596 Ga0500583_0015393
597 Ga0500651_0000203
598 Ga0500651_0000416
599 Ga0500650_0000001
600 Ga0500555_000002
601 Ga0500555_022461
602 Ga0500562_000001
603 Ga0500562_004964
604 Ga0500593_000001
605 Ga0500594_0000001
606 Ga0500594_0000139
607 Ga0500614_002410
608 Ga0500628_000006
609 Ga0500628_000077
610 Ga0500652_000084
611 Ga0500655_001993
612 Ga0500655_003268
613 Ga0500568_0014440
614 Ga0500577_0021093
615 Ga0500579_016957
616 Ga0500589_099901
617 Ga0500604_0006456
618 Ga0500633_0014746

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00281

Ribosomal_L5

Ribosomal protein L5

62

118

0.99

PF00673

Ribosomal_L5_C

ribosomal L5P family C-terminus

122

215

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fn2-assembly1.cif.gz_G the structure of a 50s ribosomal subunit in the lyme disease pathogen borreliella burgdorferi 0.9548 9 190
6ore-assembly1.cif.gz_E release complex 70s 0.9542 14 189
6ysi-assembly1.cif.gz_D acinetobacter baumannii ribosome-tigecycline complex - 50s subunit 0.953 13 188
6eri-assembly1.cif.gz_AF structure of the chloroplast ribosome with chl-rrf and hibernation-promoting factor 0.9486 11 189
8cgd-assembly1.cif.gz_f clindamycin bound to the 50s subunit 0.9465 14 189
ID Description Score Start End Superfamily
4warF00 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.9518 13 189 3.30.1440.10
4warF00 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.9415 13 189 3.30.1440.10
af_P36519_120_288_3.30.1440.10 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.8865 32 188 3.30.1440.10
af_A0A1D8PHY2_119_286_3.30.1440.10 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.8859 32 190 3.30.1440.10
af_O14337_108_278_3.30.1440.10 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.8729 32 188 3.30.1440.10
ID Description Score Start End GO Terms
AF-A0A7W4DTN3-F1-model_v4 Large ribosomal subunit protein uL5 0.9761 8 194 GO:0000049
GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-A0A563C8R2-F1-model_v4 Large ribosomal subunit protein uL5 0.9758 11 194 GO:0000049
GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-A0A660M6A1-F1-model_v4 50S ribosomal protein L5 0.9755 37 194 GO:0003735
GO:0005840
GO:0006412
GO:1990904
AF-A0A097KP58-F1-model_v4 Large ribosomal subunit protein uL5c 0.9671 13 190 GO:0003735
GO:0005840
GO:0006412
GO:0009507
GO:0019843
GO:1990904
AF-A0A7Y2A2M8-F1-model_v4 Large ribosomal subunit protein uL5 0.9663 12 193 GO:0000049
GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904

Map