F400216

General Info

Members Datasets Scaffolds Average Seq Length
309 199 618 330

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10149282|Ga0157378_101492822
Length 366
Sequence LLPNLCAGMRQARRCVHGLDLHKLKNQEANKLKRKALITGITGQDGSYLAEFLLAKGYEVHGVVRRVAIEDPEHRLCRIKHLLSEIQLHPASLESYPSICKAMKNAQPDEVYHLAAQSFVSYSFEDEFSTLNININGTHYVLAALREVCPTARFYFAGSSEMFGECKISPQDESTRFHPRSAYGISKVAGFDLTRNYREAYGVHASSGILFNHESPRRGFEFVTRKITSQVAKIKLNLAKELQLGNLDACRDWGHARDYVEAMWLMVQQDEPDDYVIATGETHSVREFLEIAFSHAGLDHRDYVKVDPQLYRAAEVSLLLGDSSKARTRLGWNYKRSFRDLVCEMVDADIQNLKAGRAETAQLAFS

Samples

Sample ID Description Type Environment
1 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
4 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
60 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
61 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300012507 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610 Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
83 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
117 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
118 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
120 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
121 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
122 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
123 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
124 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
125 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
126 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
127 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
131 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
132 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
133 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
134 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
135 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
136 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
137 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
138 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
139 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
140 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
141 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
142 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
143 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
144 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
145 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
146 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
147 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
148 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
149 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
150 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
151 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
152 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
153 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
154 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
155 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
156 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
157 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
158 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
159 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
160 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
161 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
162 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
163 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
164 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
183 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
184 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
185 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
186 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
187 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
188 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
189 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
190 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
191 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
192 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
193 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
194 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
195 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
196 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
197 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
198 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
199 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.03
Metatranscriptomes 0.97
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.29
Rhizosphere 97.09
Stem 0
Stem Tuber 0
Unclassified 10.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157378_10149282 3300013297 Bacteria 2177
2 MBSR1b_contig_12108607 2162886012 Bacteria 2647
3 ARcpr5oldR_c002706 3300000041 Bacteria 1613
4 Ga0058863_11959994 3300004799 Bacteria 1301
5 Ga0058862_12883005 3300004803 Bacteria 1464
6 Ga0065715_10000223 3300005293 Bacteria 30043
7 Ga0070683_100000134 3300005329 Bacteria 47958
8 Ga0070670_100020148 3300005331 Bacteria 5729
9 Ga0070677_10009116 3300005333 Bacteria 3359
10 Ga0070666_10004626 3300005335 Bacteria 8396
11 Ga0070666_10166283 3300005335 Bacteria 1543
12 Ga0070680_100097745 3300005336 Bacteria 2435
13 Ga0070680_100110543 3300005336 Bacteria 2288
14 Ga0070689_100024108 3300005340 Unclassified 4562
15 Ga0070687_100153235 3300005343 Bacteria 1355
16 Ga0070668_100033533 3300005347 Unclassified 3911
17 Ga0070669_100003157 3300005353 Bacteria 11850
18 Ga0070675_100000881 3300005354 Bacteria 21355
19 Ga0070671_100003566 3300005355 Bacteria 12173
20 Ga0070674_100083318 3300005356 Bacteria 2290
21 Ga0070673_100042318 3300005364 Unclassified 3511
22 Ga0070688_100011639 3300005365 Archaea 4895
23 Ga0070659_100004717 3300005366 Bacteria 9730
24 Ga0070667_100023500 3300005367 Bacteria 5115
25 Ga0070713_100021224 3300005436 Bacteria 4990
26 Ga0070713_100276641 3300005436 Bacteria 1539
27 Ga0070711_100169258 3300005439 Bacteria 1664
28 Ga0070711_100246273 3300005439 Bacteria 1400
29 Ga0070700_100002561 3300005441 Bacteria 9287
30 Ga0070700_100103493 3300005441 Unclassified 1880
31 Ga0070700_100166979 3300005441 Bacteria 1521
32 Ga0070694_100082240 3300005444 Bacteria 2242
33 Ga0070708_100035747 3300005445 Bacteria 4330
34 Ga0070708_100175652 3300005445 Bacteria 2001
35 Ga0070678_100000470 3300005456 Bacteria 19260
36 Ga0070662_100001221 3300005457 Bacteria 15792
37 Ga0070681_10026946 3300005458 Bacteria 5779
38 Ga0070681_10073987 3300005458 Bacteria 3369
39 Ga0070681_10110532 3300005458 Bacteria 2688
40 Ga0070681_10201654 3300005458 Bacteria 1908
41 Ga0068867_100292952 3300005459 Bacteria 1339
42 Ga0070706_100009635 3300005467 Bacteria 8980
43 Ga0070707_100012379 3300005468 Bacteria 7966
44 Ga0070707_100018991 3300005468 Bacteria 6474
45 Ga0070707_100109571 3300005468 Bacteria 2678
46 Ga0070698_100010403 3300005471 Bacteria 9936
47 Ga0070699_100028236 3300005518 Bacteria 4839
48 Ga0070679_100048348 3300005530 Bacteria 4238
49 Ga0070679_100105509 3300005530 Bacteria 2804
50 Ga0070679_100302767 3300005530 Bacteria 1549
51 Ga0070684_100001299 3300005535 Bacteria 17890
52 Ga0070697_100025385 3300005536 Bacteria 4727
53 Ga0070697_100253685 3300005536 Bacteria 1505
54 Ga0070697_100346464 3300005536 Bacteria 1282
55 Ga0070672_100121481 3300005543 Unclassified 2138
56 Ga0070686_100013218 3300005544 Unclassified 4720
57 Ga0070695_100043547 3300005545 Bacteria 2854
58 Ga0070665_100000091 3300005548 Bacteria 174924
59 Ga0070665_100123248 3300005548 Bacteria 2594
60 Ga0068855_100034526 3300005563 Bacteria 6031
61 Ga0068856_100062971 3300005614 Bacteria 3664
62 Ga0068859_100019964 3300005617 Bacteria 6727
63 Ga0068859_100451143 3300005617 Bacteria 1382
64 Ga0068864_100220473 3300005618 Bacteria 1750
65 Ga0068866_10163044 3300005718 Bacteria 1302
66 Ga0068861_100189303 3300005719 Bacteria 1719
67 Ga0068858_100353245 3300005842 Bacteria 1408
68 Ga0068862_100155344 3300005844 Unclassified 2039
69 Ga0070717_10033013 3300006028 Bacteria 4174
70 Ga0070716_100280206 3300006173 Bacteria 1150
71 Ga0097621_100228373 3300006237 Bacteria 1624
72 Ga0075428_100021059 3300006844 Bacteria 7221
73 Ga0075428_100039862 3300006844 Bacteria 5170
74 Ga0075428_100044281 3300006844 Unclassified 4891
75 Ga0075430_100009526 3300006846 Bacteria 8210
76 Ga0075430_100064544 3300006846 Unclassified 3076
77 Ga0075430_100134775 3300006846 Bacteria 2058
78 Ga0075431_100110083 3300006847 Bacteria 2843
79 Ga0075431_100117531 3300006847 Bacteria 2744
80 Ga0075433_10056412 3300006852 Bacteria 3431
81 Ga0075434_100008944 3300006871 Bacteria 9327
82 Ga0075434_100045144 3300006871 Unclassified 4371
83 Ga0075434_100140853 3300006871 Bacteria 2431
84 Ga0075429_100054178 3300006880 Bacteria 3489
85 Ga0068865_100102536 3300006881 Bacteria 2097
86 Ga0075436_100000412 3300006914 Bacteria 27624
87 Ga0097620_100019964 3300006931 Bacteria 6727
88 Ga0097620_100451142 3300006931 Bacteria 1382
89 Ga0075435_100046238 3300007076 Bacteria 3491
90 Ga0075435_100068044 3300007076 Bacteria 2900
91 Ga0105240_10001475 3300009093 Bacteria 40095
92 Ga0105240_10002629 3300009093 Bacteria 28620
93 Ga0105240_10008028 3300009093 Bacteria 15190
94 Ga0105240_10086434 3300009093 Unclassified 3840
95 Ga0105240_10125920 3300009093 Bacteria 3078
96 Ga0111539_10014864 3300009094 Bacteria 9707
97 Ga0111539_10024529 3300009094 Bacteria 7397
98 Ga0111539_10041167 3300009094 Bacteria 5555
99 Ga0114129_10007347 3300009147 Bacteria 15683
100 Ga0114129_10030318 3300009147 Bacteria 7655
101 Ga0114129_10073133 3300009147 Unclassified 4776
102 Ga0114129_10276618 3300009147 Bacteria 2244
103 Ga0105241_10018030 3300009174 Bacteria 5189
104 Ga0105241_10061095 3300009174 Bacteria 2901
105 Ga0105241_10226307 3300009174 Bacteria 1575
106 Ga0105242_10316980 3300009176 Bacteria 1429
107 Ga0105248_10016621 3300009177 Bacteria 8101
108 Ga0105248_10588337 3300009177 Bacteria 1256
109 Ga0105237_10001652 3300009545 Bacteria 28953
110 Ga0105237_10004829 3300009545 Bacteria 15484
111 Ga0105237_10070851 3300009545 Bacteria 3482
112 Ga0105238_10206351 3300009551 Bacteria 1941
113 Ga0105238_10299181 3300009551 Bacteria 1592
114 Ga0105239_10012863 3300010375 Bacteria 9310
115 Ga0105239_10015188 3300010375 Bacteria 8535
116 Ga0105239_10101022 3300010375 Bacteria 3191
117 Ga0105239_10182678 3300010375 Bacteria 2347
118 Ga0105239_10226352 3300010375 Bacteria 2098
119 Ga0157342_1005450 3300012507 Unclassified 1171
120 Ga0157369_10016237 3300013105 Bacteria 8379
121 Ga0157369_10128852 3300013105 Bacteria 2682
122 Ga0157374_10006799 3300013296 Bacteria 9726
123 Ga0157374_10010916 3300013296 Bacteria 7841
124 Ga0157378_10005902 3300013297 Bacteria 10728
125 Ga0157378_10205144 3300013297 Bacteria 1867
126 Ga0157378_10366454 3300013297 Bacteria 1411
127 Ga0163162_10024139 3300013306 Bacteria 6000
128 Ga0163162_10309490 3300013306 Bacteria 1712
129 Ga0157372_10097353 3300013307 Bacteria 3355
130 Ga0157375_10226530 3300013308 Bacteria 2028
131 Ga0157375_10723088 3300013308 Bacteria 1148
132 Ga0163163_10215893 3300014325 Bacteria 1967
133 Ga0157380_10223222 3300014326 Unclassified 1687
134 Ga0157380_10325095 3300014326 Bacteria 1428
135 Ga0157376_10006270 3300014969 Bacteria 8390
136 Ga0157376_10570522 3300014969 Bacteria 1122
137 Ga0213874_10006951 3300021377 Viruses 2698
138 Ga0207653_10000023 3300025885 Bacteria 118612
139 Ga0207680_10088421 3300025903 Unclassified 1964
140 Ga0207647_10184077 3300025904 Bacteria 1212
141 Ga0207699_10170554 3300025906 Bacteria 1455
142 Ga0207684_10001929 3300025910 Bacteria 21502
143 Ga0207684_10199387 3300025910 Bacteria 1727
144 Ga0207707_10050088 3300025912 Bacteria 3639
145 Ga0207707_10143464 3300025912 Bacteria 2087
146 Ga0207695_10000510 3300025913 Bacteria 82650
147 Ga0207695_10001609 3300025913 Bacteria 36607
148 Ga0207695_10014723 3300025913 Bacteria 9249
149 Ga0207695_10033168 3300025913 Bacteria 5639
150 Ga0207671_10185763 3300025914 Bacteria 1619
151 Ga0207663_10009524 3300025916 Bacteria 5136
152 Ga0207660_10092086 3300025917 Bacteria 2249
153 Ga0207657_10001065 3300025919 Bacteria 29048
154 Ga0207652_10053813 3300025921 Bacteria 3458
155 Ga0207652_10345087 3300025921 Bacteria 1344
156 Ga0207646_10000338 3300025922 Bacteria 63455
157 Ga0207646_10250385 3300025922 Bacteria 1600
158 Ga0207681_10036221 3300025923 Unclassified 3254
159 Ga0207694_10003302 3300025924 Bacteria 12833
160 Ga0207650_10026454 3300025925 Bacteria 4139
161 Ga0207659_10007142 3300025926 Bacteria 6855
162 Ga0207644_10027195 3300025931 Bacteria 3951
163 Ga0207690_10030317 3300025932 Bacteria 3448
164 Ga0207706_10000769 3300025933 Bacteria 33279
165 Ga0207670_10025256 3300025936 Archaea 3726
166 Ga0207669_10135293 3300025937 Bacteria 1701
167 Ga0207704_10080715 3300025938 Bacteria 2101
168 Ga0207691_10031635 3300025940 Bacteria 4937
169 Ga0207651_10018352 3300025960 Unclassified 4160
170 Ga0207668_10392460 3300025972 Bacteria 1171
171 Ga0207658_10020616 3300025986 Bacteria 4564
172 Ga0207708_10030566 3300026075 Unclassified 4084
173 Ga0207708_10041355 3300026075 Bacteria 3514
174 Ga0207708_10043399 3300026075 Bacteria 3427
175 Ga0207648_10060135 3300026089 Unclassified 3314
176 Ga0207675_100041691 3300026118 Unclassified 4286
177 Ga0207675_100134132 3300026118 Bacteria 2348
178 Ga0207683_10000878 3300026121 Bacteria 27555
179 Ga0207428_10079406 3300027907 Unclassified 2565
180 Ga0207428_10133156 3300027907 Bacteria 1901
181 Ga0268266_10000224 3300028379 Bacteria 98279
182 Ga0268266_10090386 3300028379 Unclassified 2684
183 Ga0268266_10114194 3300028379 Bacteria 2396
184 Ga0265322_10011667 3300028654 Bacteria 2545
185 Ga0265338_10058278 3300028800 Bacteria 3410
186 Ga0265762_1002290 3300030760 Bacteria 3458
187 Ga0265330_10092124 3300031235 Bacteria 1301
188 Ga0265320_10001149 3300031240 Bacteria 19469
189 Ga0265320_10008082 3300031240 Bacteria 6469
190 Ga0265325_10002502 3300031241 Bacteria 12380
191 Ga0265340_10007134 3300031247 Bacteria 6089
192 Ga0265331_10018540 3300031250 Bacteria 3606
193 Ga0265316_10036212 3300031344 Bacteria 3990
194 Ga0265316_10039500 3300031344 Bacteria 3789
195 Ga0265316_10109201 3300031344 Bacteria 2096
196 Ga0265316_10139689 3300031344 Bacteria 1820
197 Ga0265316_10342836 3300031344 Bacteria 1083
198 Ga0265314_10000901 3300031711 Bacteria 35179
199 Ga0307410_10248529 3300031852 Bacteria 1382
200 Ga0307406_10109517 3300031901 Bacteria 1899
201 Ga0307416_100175970 3300032002 Bacteria 1999
202 Ga0307414_10092896 3300032004 Bacteria 2248
203 Ga0373954_0051832 3300035118 Bacteria 1928
204 Ga0373956_0005264 3300035119 Bacteria 5178
205 Ga0373955_0087585 3300035172 Bacteria 1770
206 Ga0373935_0167719 3300035692 Bacteria 1500
207 Ga0373927_0002579 3300035695 Bacteria 13220
208 Ga0373927_0025384 3300035695 Bacteria 3874
209 Ga0373927_0310615 3300035695 Unclassified 1038
210 Ga0373937_0025032 3300036401 Bacteria 5388
211 Ga0373925_0001484 3300037068 Bacteria 20145
212 Ga0373925_0123672 3300037068 Bacteria 2011
213 Ga0373925_0125064 3300037068 Bacteria 2000
214 Ga0373925_0462010 3300037068 Bacteria 1040
215 Ga0436364_1364207 3300037853 Bacteria 1742
216 Ga0436365_1887696 3300039437 Viruses 3560
217 Ga0436360_0637513 3300039438 Unclassified 1373
218 Ga0436360_1168834 3300039438 Bacteria 1378
219 Ga0436363_1279941 3300039450 Viruses 6091
220 Ga0436363_1649612 3300039450 Unclassified 1358
221 Ga0451577_0096037 3300042876 Bacteria 2646
222 Ga0453683_0039925 3300044673 Bacteria 2949
223 Ga0453683_0247983 3300044673 Bacteria 1135
224 Ga0466963_0011280 3300044694 Bacteria 5438
225 Ga0453684_0138946 3300044712 Bacteria 2904
226 Ga0451576_0057576 3300045051 Bacteria 4063
227 Ga0451576_0292020 3300045051 Bacteria 1704
228 Ga0466958_0119922 3300045836 Bacteria 1646
229 Ga0495592_0017218 3300046454 Bacteria 5489
230 Ga0495629_0067392 3300046459 Bacteria 2498
231 Ga0495653_0125729 3300046463 Bacteria 1821
232 Ga0495580_0008186 3300046472 Bacteria 8323
233 Ga0495580_0022436 3300046472 Unclassified 4646
234 Ga0495580_0031197 3300046472 Bacteria 3854
235 Ga0495580_0146099 3300046472 Bacteria 1639
236 Ga0495662_0128341 3300046476 Bacteria 1246
237 Ga0495664_0011995 3300046477 Bacteria 4898
238 Ga0495608_0032096 3300046511 Bacteria 3550
239 Ga0495652_0015161 3300046529 Bacteria 6902
240 Ga0495640_0041860 3300046533 Bacteria 3199
241 Ga0495587_0187654 3300046536 Bacteria 1171
242 Ga0495645_0004920 3300046543 Bacteria 9142
243 Ga0495635_0025045 3300046663 Bacteria 4157
244 Ga0495646_0148918 3300046680 Bacteria 1303
245 Ga0495647_0059895 3300046681 Unclassified 1500
246 Ga0495658_0159549 3300046683 Bacteria 1390
247 Ga0495672_0045220 3300047320 Bacteria 2636
248 Ga0495680_0036617 3300047322 Bacteria 3938
249 Ga0495602_0066110 3300048088 Bacteria 3117
250 Ga0496112_0015181 3300048915 Bacteria 7178
251 Ga0496112_0063222 3300048915 Unclassified 3651
252 Ga0496112_0425181 3300048915 Bacteria 1267
253 Ga0496115_0105111 3300048918 Bacteria 2317
254 Ga0501031_0001176 3300049568 Bacteria 15920
255 Ga0501032_0007510 3300049569 Bacteria 7963
256 Ga0501033_0032997 3300049570 Bacteria 3887
257 Ga0501034_0028084 3300049571 Bacteria 5722
258 Ga0501034_0200868 3300049571 Bacteria 1952
259 Ga0501036_0000245 3300049572 Bacteria 36628
260 Ga0501037_0001121 3300049573 Bacteria 19908
261 Ga0501038_0002297 3300049574 Bacteria 17781
262 Ga0501038_0012784 3300049574 Bacteria 7667
263 Ga0501039_0000958 3300049575 Bacteria 21021
264 Ga0501039_0023055 3300049575 Bacteria 4775
265 Ga0501040_0266481 3300049576 Bacteria 1223
266 Ga0501041_0005950 3300049577 Bacteria 7134
267 Ga0501042_0010501 3300049578 Bacteria 6213
268 Ga0501043_0001860 3300049579 Bacteria 18070
269 Ga0501046_0000976 3300049580 Bacteria 28016
270 Ga0501046_0213508 3300049580 Bacteria 1431
271 Ga0501047_0037705 3300049581 Bacteria 4674
272 Ga0501048_0057034 3300049582 Bacteria 2770
273 Ga0501067_0001828 3300049583 Bacteria 11687
274 Ga0501072_0001883 3300049588 Bacteria 15625
275 Ga0501073_0007296 3300049589 Bacteria 8226
276 Ga0501077_0024538 3300049593 Bacteria 3829
277 Ga0501077_0050333 3300049593 Bacteria 2648
278 Ga0501079_0000799 3300049741 Bacteria 21448
279 Ga0501079_0008022 3300049741 Bacteria 8001
280 Ga0501080_0018604 3300049742 Bacteria 6429
281 Ga0501035_0006040 3300049822 Bacteria 11402
282 Ga0501035_0058787 3300049822 Bacteria 3424
283 nmdc:mga05p37_213676_c1 3300050507 Bacteria 2330
284 nmdc:mga05p37_270591_c1 3300050507 Bacteria 2030
285 nmdc:mga05p37_31525_c1 3300050507 Bacteria 6474
286 nmdc:mga05p37_34936_c1 3300050507 Bacteria 6161
287 nmdc:mga05p37_361981_c1 3300050507 Bacteria 1705
288 nmdc:mga05p37_66545_c1 3300050507 Unclassified 4432
289 nmdc:mga05p37_727466_c1 3300050507 Bacteria 1098
290 nmdc:mga0qj67_57765_c1 3300050509 Unclassified 3076
291 nmdc:mga06r32_17265_c1 3300050510 Bacteria 6588
292 nmdc:mga06r32_17280_c1 3300050510 Bacteria 6585
293 nmdc:mga06r32_261412_c1 3300050510 Bacteria 1718
294 nmdc:mga08y16_10521_c1 3300050511 Bacteria 9707
295 nmdc:mga08y16_16949_c1 3300050511 Bacteria 7671
296 nmdc:mga08y16_37633_c1 3300050511 Bacteria 5079
297 nmdc:mga0n895_40605_c1 3300050512 Bacteria 4519
298 nmdc:mga0n895_73538_c1 3300050512 Unclassified 3393
299 nmdc:mga0n895_90887_c1 3300050512 Bacteria 3055
300 nmdc:mga0rr50_112232_c1 3300050513 Bacteria 2158
301 nmdc:mga0rr50_229861_c1 3300050513 Bacteria 1534
302 nmdc:mga0rr50_61112_c1 3300050513 Bacteria 2837
303 nmdc:mga08x19_222716_c1 3300050514 Bacteria 1296
304 nmdc:mga08x19_491_c1 3300050514 Bacteria 26311
305 nmdc:mga0a205_30117_c1 3300050515 Bacteria 5195
306 Ga0501084_0000929 3300054114 Bacteria 22672
307 Ga0501082_0004720 3300060353 Bacteria 11884
308 Ga0501082_0011740 3300060353 Bacteria 7530
309 Ga0530510_0020482 3300061734 Bacteria 4702
310 Ga0157378_10149282
311 MBSR1b_contig_12108607
312 ARcpr5oldR_c002706
313 Ga0058863_11959994
314 Ga0058862_12883005
315 Ga0065715_10000223
316 Ga0070683_100000134
317 Ga0070670_100020148
318 Ga0070677_10009116
319 Ga0070666_10004626
320 Ga0070666_10166283
321 Ga0070680_100097745
322 Ga0070680_100110543
323 Ga0070689_100024108
324 Ga0070687_100153235
325 Ga0070668_100033533
326 Ga0070669_100003157
327 Ga0070675_100000881
328 Ga0070671_100003566
329 Ga0070674_100083318
330 Ga0070673_100042318
331 Ga0070688_100011639
332 Ga0070659_100004717
333 Ga0070667_100023500
334 Ga0070713_100021224
335 Ga0070713_100276641
336 Ga0070711_100169258
337 Ga0070711_100246273
338 Ga0070700_100002561
339 Ga0070700_100103493
340 Ga0070700_100166979
341 Ga0070694_100082240
342 Ga0070708_100035747
343 Ga0070708_100175652
344 Ga0070678_100000470
345 Ga0070662_100001221
346 Ga0070681_10026946
347 Ga0070681_10073987
348 Ga0070681_10110532
349 Ga0070681_10201654
350 Ga0068867_100292952
351 Ga0070706_100009635
352 Ga0070707_100012379
353 Ga0070707_100018991
354 Ga0070707_100109571
355 Ga0070698_100010403
356 Ga0070699_100028236
357 Ga0070679_100048348
358 Ga0070679_100105509
359 Ga0070679_100302767
360 Ga0070684_100001299
361 Ga0070697_100025385
362 Ga0070697_100253685
363 Ga0070697_100346464
364 Ga0070672_100121481
365 Ga0070686_100013218
366 Ga0070695_100043547
367 Ga0070665_100000091
368 Ga0070665_100123248
369 Ga0068855_100034526
370 Ga0068856_100062971
371 Ga0068859_100019964
372 Ga0068859_100451143
373 Ga0068864_100220473
374 Ga0068866_10163044
375 Ga0068861_100189303
376 Ga0068858_100353245
377 Ga0068862_100155344
378 Ga0070717_10033013
379 Ga0070716_100280206
380 Ga0097621_100228373
381 Ga0075428_100021059
382 Ga0075428_100039862
383 Ga0075428_100044281
384 Ga0075430_100009526
385 Ga0075430_100064544
386 Ga0075430_100134775
387 Ga0075431_100110083
388 Ga0075431_100117531
389 Ga0075433_10056412
390 Ga0075434_100008944
391 Ga0075434_100045144
392 Ga0075434_100140853
393 Ga0075429_100054178
394 Ga0068865_100102536
395 Ga0075436_100000412
396 Ga0097620_100019964
397 Ga0097620_100451142
398 Ga0075435_100046238
399 Ga0075435_100068044
400 Ga0105240_10001475
401 Ga0105240_10002629
402 Ga0105240_10008028
403 Ga0105240_10086434
404 Ga0105240_10125920
405 Ga0111539_10014864
406 Ga0111539_10024529
407 Ga0111539_10041167
408 Ga0114129_10007347
409 Ga0114129_10030318
410 Ga0114129_10073133
411 Ga0114129_10276618
412 Ga0105241_10018030
413 Ga0105241_10061095
414 Ga0105241_10226307
415 Ga0105242_10316980
416 Ga0105248_10016621
417 Ga0105248_10588337
418 Ga0105237_10001652
419 Ga0105237_10004829
420 Ga0105237_10070851
421 Ga0105238_10206351
422 Ga0105238_10299181
423 Ga0105239_10012863
424 Ga0105239_10015188
425 Ga0105239_10101022
426 Ga0105239_10182678
427 Ga0105239_10226352
428 Ga0157342_1005450
429 Ga0157369_10016237
430 Ga0157369_10128852
431 Ga0157374_10006799
432 Ga0157374_10010916
433 Ga0157378_10005902
434 Ga0157378_10205144
435 Ga0157378_10366454
436 Ga0163162_10024139
437 Ga0163162_10309490
438 Ga0157372_10097353
439 Ga0157375_10226530
440 Ga0157375_10723088
441 Ga0163163_10215893
442 Ga0157380_10223222
443 Ga0157380_10325095
444 Ga0157376_10006270
445 Ga0157376_10570522
446 Ga0213874_10006951
447 Ga0207653_10000023
448 Ga0207680_10088421
449 Ga0207647_10184077
450 Ga0207699_10170554
451 Ga0207684_10001929
452 Ga0207684_10199387
453 Ga0207707_10050088
454 Ga0207707_10143464
455 Ga0207695_10000510
456 Ga0207695_10001609
457 Ga0207695_10014723
458 Ga0207695_10033168
459 Ga0207671_10185763
460 Ga0207663_10009524
461 Ga0207660_10092086
462 Ga0207657_10001065
463 Ga0207652_10053813
464 Ga0207652_10345087
465 Ga0207646_10000338
466 Ga0207646_10250385
467 Ga0207681_10036221
468 Ga0207694_10003302
469 Ga0207650_10026454
470 Ga0207659_10007142
471 Ga0207644_10027195
472 Ga0207690_10030317
473 Ga0207706_10000769
474 Ga0207670_10025256
475 Ga0207669_10135293
476 Ga0207704_10080715
477 Ga0207691_10031635
478 Ga0207651_10018352
479 Ga0207668_10392460
480 Ga0207658_10020616
481 Ga0207708_10030566
482 Ga0207708_10041355
483 Ga0207708_10043399
484 Ga0207648_10060135
485 Ga0207675_100041691
486 Ga0207675_100134132
487 Ga0207683_10000878
488 Ga0207428_10079406
489 Ga0207428_10133156
490 Ga0268266_10000224
491 Ga0268266_10090386
492 Ga0268266_10114194
493 Ga0265322_10011667
494 Ga0265338_10058278
495 Ga0265762_1002290
496 Ga0265330_10092124
497 Ga0265320_10001149
498 Ga0265320_10008082
499 Ga0265325_10002502
500 Ga0265340_10007134
501 Ga0265331_10018540
502 Ga0265316_10036212
503 Ga0265316_10039500
504 Ga0265316_10109201
505 Ga0265316_10139689
506 Ga0265316_10342836
507 Ga0265314_10000901
508 Ga0307410_10248529
509 Ga0307406_10109517
510 Ga0307416_100175970
511 Ga0307414_10092896
512 Ga0373954_0051832
513 Ga0373956_0005264
514 Ga0373955_0087585
515 Ga0373935_0167719
516 Ga0373927_0002579
517 Ga0373927_0025384
518 Ga0373927_0310615
519 Ga0373937_0025032
520 Ga0373925_0001484
521 Ga0373925_0123672
522 Ga0373925_0125064
523 Ga0373925_0462010
524 Ga0436364_1364207
525 Ga0436365_1887696
526 Ga0436360_0637513
527 Ga0436360_1168834
528 Ga0436363_1279941
529 Ga0436363_1649612
530 Ga0451577_0096037
531 Ga0453683_0039925
532 Ga0453683_0247983
533 Ga0466963_0011280
534 Ga0453684_0138946
535 Ga0451576_0057576
536 Ga0451576_0292020
537 Ga0466958_0119922
538 Ga0495592_0017218
539 Ga0495629_0067392
540 Ga0495653_0125729
541 Ga0495580_0008186
542 Ga0495580_0022436
543 Ga0495580_0031197
544 Ga0495580_0146099
545 Ga0495662_0128341
546 Ga0495664_0011995
547 Ga0495608_0032096
548 Ga0495652_0015161
549 Ga0495640_0041860
550 Ga0495587_0187654
551 Ga0495645_0004920
552 Ga0495635_0025045
553 Ga0495646_0148918
554 Ga0495647_0059895
555 Ga0495658_0159549
556 Ga0495672_0045220
557 Ga0495680_0036617
558 Ga0495602_0066110
559 Ga0496112_0015181
560 Ga0496112_0063222
561 Ga0496112_0425181
562 Ga0496115_0105111
563 Ga0501031_0001176
564 Ga0501032_0007510
565 Ga0501033_0032997
566 Ga0501034_0028084
567 Ga0501034_0200868
568 Ga0501036_0000245
569 Ga0501037_0001121
570 Ga0501038_0002297
571 Ga0501038_0012784
572 Ga0501039_0000958
573 Ga0501039_0023055
574 Ga0501040_0266481
575 Ga0501041_0005950
576 Ga0501042_0010501
577 Ga0501043_0001860
578 Ga0501046_0000976
579 Ga0501046_0213508
580 Ga0501047_0037705
581 Ga0501048_0057034
582 Ga0501067_0001828
583 Ga0501072_0001883
584 Ga0501073_0007296
585 Ga0501077_0024538
586 Ga0501077_0050333
587 Ga0501079_0000799
588 Ga0501079_0008022
589 Ga0501080_0018604
590 Ga0501035_0006040
591 Ga0501035_0058787
592 nmdc:mga05p37_213676_c1
593 nmdc:mga05p37_270591_c1
594 nmdc:mga05p37_31525_c1
595 nmdc:mga05p37_34936_c1
596 nmdc:mga05p37_361981_c1
597 nmdc:mga05p37_66545_c1
598 nmdc:mga05p37_727466_c1
599 nmdc:mga0qj67_57765_c1
600 nmdc:mga06r32_17265_c1
601 nmdc:mga06r32_17280_c1
602 nmdc:mga06r32_261412_c1
603 nmdc:mga08y16_10521_c1
604 nmdc:mga08y16_16949_c1
605 nmdc:mga08y16_37633_c1
606 nmdc:mga0n895_40605_c1
607 nmdc:mga0n895_73538_c1
608 nmdc:mga0n895_90887_c1
609 nmdc:mga0rr50_112232_c1
610 nmdc:mga0rr50_229861_c1
611 nmdc:mga0rr50_61112_c1
612 nmdc:mga08x19_222716_c1
613 nmdc:mga08x19_491_c1
614 nmdc:mga0a205_30117_c1
615 Ga0501084_0000929
616 Ga0501082_0004720
617 Ga0501082_0011740
618 Ga0530510_0020482

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

36

278

0.95

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

37

345

0.95

PF04321

RmlD_sub_bind

RmlD substrate binding domain

34

236

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z95-assembly1.cif.gz_C crystal structure of gdp-d-mannose dehydratase from aquifex aeolicus vf5 0.9522 1 322
1n7g-assembly1.cif.gz_D crystal structure of the gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp-rhamnose. 0.9497 1 324
1rpn-assembly3.cif.gz_C crystal structure of gdp-d-mannose 4,6-dehydratase in complexes with gdp and nadph 0.9455 1 323
2z95-assembly1.cif.gz_A crystal structure of gdp-d-mannose dehydratase from aquifex aeolicus vf5 0.9411 1 322
2z95-assembly1.cif.gz_C crystal structure of gdp-d-mannose dehydratase from aquifex aeolicus vf5 0.9408 1 322
ID Description Score Start End Superfamily
af_Q54H02_2_246_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.942 2 32 3.50.50.60
af_P0AC88_3_270_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9416 2 262 3.40.50.720
1db3A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9293 1 304 3.40.50.720
1db3A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9251 1 304 3.40.50.720
af_P0AC88_3_270_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9143 2 262 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A846NYP9-F1-model_v4 deleted 0.9773 146 322
AF-A0A146LA67-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) 0.9765 121 264 GO:0008446
GO:0042351
AF-K9ZLN4-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) 0.9759 1 324 GO:0008446
GO:0042351
GO:0070401
AF-A0A730K5U1-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.9754 179 260 GO:0008446
GO:0042351
AF-A0A537XBI3-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.9716 2 325 GO:0008446
GO:0042351

Map