F400046

General Info

Members Datasets Scaffolds Average Seq Length
309 174 285 398

Family's Representative Sequence

Representative Sequence 3300005336|Ga0070680_100218275|Ga0070680_1002182752
Length 444
Sequence MLLYGIRNILVLKKIIHPSSLLCSVDLNLQSGNLKMSGSATLENKLEKTVYPILFAISFSHLLNDTIQSLIPAIYPILKTNYNLSFSQVGLITLTFQMAASLLQPFVGLYTDREPQPYSLATGMGFTLGGLIVLSMSHNFHLVLVAVGLVGIGSSIFHPESSRMAHAAAGDQRGLAQSIFQLGGNLGSSIGPLLAAWIIVPHGQMSIIWFSLIALLAIFVLTKVGNWYNENVIKTRLKRKEKITVSHSSFSKRKVAFSVSILLILIFSKYFYLASFTSYFTFYLINKFHVGIQTSQIYLFVFLVSVAGGTLIGGPLGDRFGRKYVIWVSILGTAPFALLLPYANLFWTVILVIPIGLILSSAFSAILVYAQELIPGKIGLVSGLFFGFAFGMGGIGSALLGNLADKTSILHVFHICSFLPLIGIITGFLPNIEGSKKRKKKVIA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2738541302 Pedobacter sp. CF074 Isolate Unclassified
4 2739367651 Pedobacter sp. OK291 Isolate Unclassified
5 2739367656 Pedobacter sp. CF523 Isolate Unclassified
6 2739367663 Pedobacter sp. YR510 Isolate Unclassified
7 2818991437 Pedobacter terrae 518 Isolate Unclassified
8 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
9 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
10 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
11 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
12 2855730933 Achromobacter sp. HZ28 Isolate Nodule
13 2855767633 Achromobacter sp. HZ34 Isolate Nodule
14 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
15 2858950400 Achromobacter sp. K91 Isolate Unclassified
16 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
17 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
18 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
19 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
20 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
21 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
22 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
23 2941479691
24 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
25 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
26 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
27 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
28 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
29 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
30 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
32 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
33 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
34 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
35 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
36 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
37 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
38 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
39 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
40 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
41 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
42 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
43 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
44 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
45 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
46 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
47 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
48 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
49 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
50 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
51 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
52 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
53 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
54 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
55 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
56 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
57 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
58 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
59 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
60 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
61 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
62 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
63 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
64 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
65 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
82 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
83 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
84 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
87 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
88 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
89 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
90 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
93 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
94 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
118 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
119 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
120 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
121 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
122 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
123 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
124 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
125 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
126 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
127 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
128 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
129 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
130 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
131 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
132 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
133 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
134 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
135 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
136 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
137 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
138 3300033544 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 Metagenome Unclassified
139 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
140 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
141 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
142 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
143 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
144 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
145 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
146 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
147 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
148 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
149 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
150 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
151 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
152 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
153 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
154 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
155 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
156 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
157 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
158 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
159 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
160 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
161 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
162 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
163 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
172 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
173 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
174 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.23
Metatranscriptomes 0
Isolates 7.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.8
Nodule 0.65
Rhizoplane 0
Rhizosphere 82.2
Stem 0
Stem Tuber 0
Unclassified 10.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2387710 2162886007 Bacteria 2985
2 CNXas_1000064 3300000545 Bacteria 20367
3 JGI25152J39213_1000476 3300002773 Bacteria 23167
4 JGI25150J39212_1000002 3300002774 Bacteria 537631
5 JGI25151J46595_10000003 3300003187 Bacteria 715330
6 JGI25406J46586_10004354 3300003203 Bacteria 6608
7 JGI25153J46596_10000003 3300003215 Bacteria 553253
8 rootH2_10003541 3300003320 Bacteria 18770
9 rootH2_10116037 3300003320 Bacteria 2293
10 rootL2_10215524 3300003322 Bacteria 1665
11 rootH1_10073660 3300003323 Bacteria 5673
12 rootH1_10130425 3300003323 Unclassified 2310
13 Ga0055536_1000049 3300003781 Bacteria 113328
14 Ga0055536_1008393 3300003781 Bacteria 4446
15 Ga0055530_10002221 3300003791 Bacteria 12811
16 Ga0065165_1000023 3300005262 Bacteria 251942
17 Ga0065714_10065418 3300005288 Bacteria 10177
18 Ga0065704_10106996 3300005289 Bacteria 2067
19 Ga0070658_10022313 3300005327 Bacteria 5079
20 Ga0070676_10170066 3300005328 Bacteria 1409
21 Ga0070683_100000416 3300005329 Bacteria 29488
22 Ga0070670_100082883 3300005331 Bacteria 2756
23 Ga0070680_100218275 3300005336 Bacteria 1609
24 Ga0068868_100117095 3300005338 Bacteria 2170
25 Ga0070660_100004486 3300005339 Bacteria 9648
26 Ga0070691_10035454 3300005341 Bacteria 2349
27 Ga0070674_100217267 3300005356 Unclassified 1485
28 Ga0070659_100005578 3300005366 Bacteria 9042
29 Ga0070659_100011025 3300005366 Bacteria 6675
30 Ga0070714_100000587 3300005435 Bacteria 26129
31 Ga0070663_100081654 3300005455 Bacteria 2377
32 Ga0070681_10021793 3300005458 Bacteria 6425
33 Ga0070681_10066470 3300005458 Bacteria 3574
34 Ga0070679_100002217 3300005530 Bacteria 17543
35 Ga0070679_100006575 3300005530 Bacteria 10830
36 Ga0070679_100010763 3300005530 Bacteria 8685
37 Ga0070679_100018343 3300005530 Bacteria 6789
38 Ga0070679_100317889 3300005530 Unclassified 1506
39 Ga0070684_100010866 3300005535 Bacteria 7235
40 Ga0068853_100001585 3300005539 Bacteria 16590
41 Ga0068853_100102768 3300005539 Bacteria 2529
42 Ga0068855_100000630 3300005563 Bacteria 43230
43 Ga0068855_100001137 3300005563 Bacteria 32980
44 Ga0068855_100048938 3300005563 Bacteria 4988
45 Ga0068855_100053743 3300005563 Bacteria 4737
46 Ga0068855_100233293 3300005563 Bacteria 2059
47 Ga0068857_100012210 3300005577 Bacteria 7472
48 Ga0068857_100038830 3300005577 Bacteria 4215
49 Ga0068854_100043197 3300005578 Bacteria 3194
50 Ga0068856_100023362 3300005614 Bacteria 6011
51 Ga0068856_100096994 3300005614 Bacteria 2937
52 Ga0068852_100001126 3300005616 Bacteria 17673
53 Ga0068852_100029976 3300005616 Bacteria 4474
54 Ga0068860_100000046 3300005843 Bacteria 214800
55 Ga0081540_1014264 3300005983 Bacteria 5102
56 Ga0081539_10003178 3300005985 Bacteria 20815
57 Ga0075367_10018766 3300006178 Bacteria 3822
58 Ga0105240_10000021 3300009093 Bacteria 394304
59 Ga0105240_10000195 3300009093 Bacteria 123313
60 Ga0105240_10000698 3300009093 Bacteria 61738
61 Ga0105240_10001517 3300009093 Bacteria 39516
62 Ga0105240_10003329 3300009093 Bacteria 25018
63 Ga0105240_10014812 3300009093 Bacteria 10628
64 Ga0105240_10087685 3300009093 Bacteria 3810
65 Ga0105240_10129751 3300009093 Bacteria 3025
66 Ga0105240_10136309 3300009093 Bacteria 2939
67 Ga0105243_10000008 3300009148 Bacteria 390270
68 Ga0105243_10063816 3300009148 Bacteria 2953
69 Ga0105241_10000231 3300009174 Bacteria 42173
70 Ga0105241_10040727 3300009174 Bacteria 3508
71 Ga0105248_10000003 3300009177 Bacteria 1019601
72 Ga0105237_10008788 3300009545 Bacteria 10895
73 Ga0105237_10018768 3300009545 Bacteria 7151
74 Ga0105237_10031794 3300009545 Bacteria 5346
75 Ga0105238_10004513 3300009551 Bacteria 13799
76 Ga0105239_10000048 3300010375 Bacteria 177855
77 Ga0105239_10002831 3300010375 Bacteria 21700
78 Ga0105239_10019190 3300010375 Bacteria 7553
79 Ga0105239_10026024 3300010375 Bacteria 6442
80 Ga0105239_10078746 3300010375 Bacteria 3627
81 Ga0157373_10000010 3300013100 Bacteria 195861
82 Ga0157373_10003302 3300013100 Bacteria 12190
83 Ga0157373_10017743 3300013100 Bacteria 5182
84 Ga0157373_10030239 3300013100 Bacteria 3897
85 Ga0157373_10035093 3300013100 Bacteria 3602
86 Ga0157371_10000119 3300013102 Bacteria 120350
87 Ga0157371_10000178 3300013102 Bacteria 92872
88 Ga0157371_10001606 3300013102 Bacteria 23180
89 Ga0157371_10002157 3300013102 Bacteria 19159
90 Ga0157371_10004980 3300013102 Bacteria 11402
91 Ga0157371_10008530 3300013102 Bacteria 8159
92 Ga0157371_10013828 3300013102 Bacteria 6113
93 Ga0157371_10113617 3300013102 Bacteria 1923
94 Ga0157371_10224525 3300013102 Bacteria 1349
95 Ga0157370_10000029 3300013104 Bacteria 145930
96 Ga0157370_10000106 3300013104 Bacteria 96408
97 Ga0157370_10000473 3300013104 Bacteria 50187
98 Ga0157370_10002012 3300013104 Bacteria 24966
99 Ga0157370_10004121 3300013104 Bacteria 16850
100 Ga0157370_10008808 3300013104 Bacteria 10842
101 Ga0157370_10011418 3300013104 Bacteria 9289
102 Ga0157370_10028555 3300013104 Bacteria 5486
103 Ga0157370_10052662 3300013104 Bacteria 3885
104 Ga0157370_10062705 3300013104 Bacteria 3525
105 Ga0157370_10071497 3300013104 Bacteria 3273
106 Ga0157370_10074884 3300013104 Bacteria 3193
107 Ga0157369_10000015 3300013105 Bacteria 262917
108 Ga0157369_10007264 3300013105 Bacteria 12753
109 Ga0157369_10009715 3300013105 Bacteria 11003
110 Ga0157369_10029919 3300013105 Bacteria 6012
111 Ga0157369_10042557 3300013105 Bacteria 4954
112 Ga0157369_10080965 3300013105 Bacteria 3476
113 Ga0157369_10278448 3300013105 Bacteria 1742
114 Ga0157374_10000001 3300013296 Bacteria 1077351
115 Ga0157378_10083300 3300013297 Unclassified 2894
116 Ga0157378_10166547 3300013297 Bacteria 2065
117 Ga0163162_10002531 3300013306 Bacteria 17288
118 Ga0157372_10000596 3300013307 Bacteria 39416
119 Ga0157372_10002035 3300013307 Bacteria 21994
120 Ga0157372_10005009 3300013307 Bacteria 14072
121 Ga0157372_10031399 3300013307 Bacteria 5817
122 Ga0157372_10046204 3300013307 Bacteria 4833
123 Ga0157372_10046228 3300013307 Bacteria 4832
124 Ga0157372_10069983 3300013307 Bacteria 3947
125 Ga0157372_10121314 3300013307 Bacteria 3003
126 Ga0157372_10577182 3300013307 Unclassified 1311
127 Ga0157375_10049673 3300013308 Bacteria 4111
128 Ga0182008_10005531 3300014497 Bacteria 7185
129 Ga0182008_10019585 3300014497 Bacteria 3492
130 Ga0182006_1000352 3300015261 Bacteria 38650
131 Ga0182006_1000419 3300015261 Bacteria 34013
132 Ga0182006_1005462 3300015261 Bacteria 6060
133 Ga0182006_1007229 3300015261 Bacteria 5100
134 Ga0182006_1007540 3300015261 Bacteria 4974
135 Ga0182007_10000010 3300015262 Bacteria 286070
136 Ga0182007_10005725 3300015262 Bacteria 5417
137 Ga0183373_1005 3300015682 Bacteria 351562
138 Ga0163161_10000390 3300017792 Bacteria 36791
139 Ga0163161_10000474 3300017792 Bacteria 33342
140 Ga0213875_10061005 3300021388 Bacteria 1763
141 Ga0213871_10000552 3300021441 Bacteria 5237
142 Ga0207425_1000004 3300025245 Bacteria 1092421
143 Ga0209129_1000005 3300025258 Bacteria 777812
144 Ga0209455_1004206 3300025272 Bacteria 4801
145 Ga0209676_1000001 3300025292 Bacteria 1852142
146 Ga0209676_1000229 3300025292 Bacteria 122052
147 Ga0209025_1000009 3300025294 Bacteria 1092561
148 Ga0209758_1000010 3300025297 Bacteria 1092782
149 Ga0209050_1000258 3300025298 Bacteria 113741
150 Ga0207647_10022452 3300025904 Bacteria 4190
151 Ga0207705_10032105 3300025909 Bacteria 3751
152 Ga0207705_10034859 3300025909 Bacteria 3599
153 Ga0207654_10006786 3300025911 Bacteria 5758
154 Ga0207707_10012003 3300025912 Bacteria 7530
155 Ga0207707_10050258 3300025912 Bacteria 3632
156 Ga0207695_10000023 3300025913 Bacteria 657903
157 Ga0207695_10000083 3300025913 Bacteria 284102
158 Ga0207695_10000110 3300025913 Bacteria 250079
159 Ga0207695_10000229 3300025913 Bacteria 149313
160 Ga0207695_10002425 3300025913 Bacteria 27622
161 Ga0207695_10003609 3300025913 Bacteria 21643
162 Ga0207695_10034020 3300025913 Bacteria 5549
163 Ga0207695_10115883 3300025913 Unclassified 2654
164 Ga0207671_10003761 3300025914 Bacteria 14941
165 Ga0207671_10151849 3300025914 Bacteria 1789
166 Ga0207660_10055044 3300025917 Bacteria 2841
167 Ga0207660_10170783 3300025917 Bacteria 1683
168 Ga0207660_10197430 3300025917 Bacteria 1570
169 Ga0207657_10013880 3300025919 Bacteria 7883
170 Ga0207652_10000018 3300025921 Bacteria 187527
171 Ga0207652_10000121 3300025921 Bacteria 85376
172 Ga0207652_10082605 3300025921 Bacteria 2811
173 Ga0207652_10151232 3300025921 Bacteria 2078
174 Ga0207650_10063613 3300025925 Bacteria 2759
175 Ga0207664_10005311 3300025929 Bacteria 8799
176 Ga0207690_10019478 3300025932 Bacteria 4181
177 Ga0207709_10000006 3300025935 Bacteria 800946
178 Ga0207661_10017050 3300025944 Bacteria 5366
179 Ga0207667_10000791 3300025949 Bacteria 41085
180 Ga0207667_10001825 3300025949 Bacteria 26812
181 Ga0207667_10002129 3300025949 Bacteria 24819
182 Ga0207667_10012201 3300025949 Bacteria 9926
183 Ga0207667_10092416 3300025949 Bacteria 3125
184 Ga0207667_10196940 3300025949 Bacteria 2067
185 Ga0207667_10322402 3300025949 Bacteria 1578
186 Ga0207640_10048603 3300025981 Bacteria 2743
187 Ga0207658_10224024 3300025986 Bacteria 1584
188 Ga0207639_10021372 3300026041 Bacteria 4648
189 Ga0207678_10001999 3300026067 Bacteria 18559
190 Ga0207678_10056222 3300026067 Bacteria 3388
191 Ga0207702_10071757 3300026078 Bacteria 2983
192 Ga0207674_10027468 3300026116 Bacteria 6019
193 Ga0207674_10028595 3300026116 Bacteria 5881
194 Ga0207698_10003836 3300026142 Bacteria 9100
195 Ga0207698_10033455 3300026142 Bacteria 3736
196 Ga0265326_10017177 3300028558 Bacteria 2088
197 Ga0265319_1003034 3300028563 Bacteria 8899
198 Ga0265318_10006130 3300028577 Bacteria 5569
199 Ga0265323_10008908 3300028653 Bacteria 4122
200 Ga0307517_10010902 3300028786 Bacteria 12662
201 Ga0265324_10037302 3300029957 Bacteria 1689
202 Ga0307511_10000285 3300030521 Bacteria 53256
203 Ga0265320_10000900 3300031240 Bacteria 22353
204 Ga0265320_10023230 3300031240 Bacteria 3304
205 Ga0265325_10001545 3300031241 Bacteria 16087
206 Ga0265316_10068647 3300031344 Bacteria 2737
207 Ga0265316_10149813 3300031344 Bacteria 1748
208 Ga0265316_10216221 3300031344 Bacteria 1416
209 Ga0307509_10002247 3300031507 Bacteria 31612
210 Ga0307509_10021070 3300031507 Bacteria 7380
211 Ga0265313_10001657 3300031595 Bacteria 20646
212 Ga0265313_10006250 3300031595 Bacteria 8496
213 Ga0307508_10084637 3300031616 Bacteria 2754
214 Ga0265342_10003055 3300031712 Bacteria 13991
215 Ga0265342_10039715 3300031712 Bacteria 2857
216 Ga0307405_10000001 3300031731 Bacteria 1731270
217 Ga0307405_10000035 3300031731 Bacteria 92134
218 Ga0307406_10058674 3300031901 Bacteria 2474
219 Ga0307407_10000120 3300031903 Bacteria 25292
220 Ga0307409_100033288 3300031995 Bacteria 3749
221 Ga0307416_100000037 3300032002 Bacteria 137513
222 Ga0307414_10024755 3300032004 Bacteria 3833
223 Ga0307411_10001416 3300032005 Bacteria 9766
224 Ga0316215_1001065 3300033544 Bacteria 2666
225 Ga0373935_0019635 3300035692 Bacteria 4121
226 Ga0373947_0112114 3300035725 Bacteria 1725
227 Ga0395899_0002066 3300037312 Bacteria 16524
228 Ga0395899_0008880 3300037312 Bacteria 7737
229 Ga0395899_0035329 3300037312 Bacteria 3752
230 Ga0395900_0034243 3300037418 Bacteria 5229
231 Ga0395900_0034664 3300037418 Bacteria 5198
232 Ga0395900_0059587 3300037418 Bacteria 3930
233 Ga0395898_0001441 3300037466 Bacteria 33717
234 Ga0395898_0001660 3300037466 Bacteria 29878
235 Ga0395898_0007181 3300037466 Bacteria 11827
236 Ga0395898_0015690 3300037466 Bacteria 7762
237 Ga0395898_0052373 3300037466 Bacteria 3988
238 Ga0395898_0083727 3300037466 Bacteria 3074
239 Ga0395898_0094490 3300037466 Bacteria 2873
240 Ga0395898_0344062 3300037466 Bacteria 1422
241 Ga0395905_0010092 3300037471 Bacteria 9205
242 Ga0395905_0014009 3300037471 Bacteria 7669
243 Ga0395905_0116765 3300037471 Bacteria 2508
244 Ga0436364_0226250 3300037853 Bacteria 3805
245 Ga0436364_0261825 3300037853 Bacteria 5974
246 Ga0436364_0434061 3300037853 Bacteria 4018
247 Ga0436364_1265702 3300037853 Bacteria 2193
248 Ga0395901_0014638 3300038443 Bacteria 7971
249 Ga0395901_0084433 3300038443 Bacteria 3319
250 Ga0395901_0085349 3300038443 Bacteria 3300
251 Ga0395901_0322077 3300038443 Bacteria 1599
252 Ga0436365_0376487 3300039437 Bacteria 2150
253 Ga0436365_0967942 3300039437 Unclassified 4763
254 Ga0436360_0000771 3300039438 Bacteria 7673
255 Ga0466969_0044913 3300044656 Bacteria 2195
256 Ga0466972_0020326 3300044658 Bacteria 3318
257 Ga0466959_0001399 3300045049 Bacteria 14766
258 Ga0495650_0027106 3300046471 Bacteria 2654
259 Ga0495585_0000132 3300046492 Bacteria 80905
260 Ga0495610_0000045 3300046512 Bacteria 155304
261 Ga0495610_0000329 3300046512 Bacteria 50268
262 Ga0495616_0066166 3300046513 Bacteria 1758
263 Ga0495654_0006856 3300046530 Bacteria 6423
264 Ga0495633_0028959 3300046558 Bacteria 2695
265 Ga0495633_0105220 3300046558 Bacteria 1309
266 Ga0495611_0000277 3300046648 Bacteria 34960
267 Ga0495625_0000125 3300046660 Bacteria 120726
268 Ga0495649_0000044 3300046694 Bacteria 120721
269 Ga0495649_0069544 3300046694 Bacteria 1888
270 Ga0495687_000001 3300047443 Bacteria 1215582
271 Ga0495686_0000004 3300047472 Bacteria 869019
272 Ga0495686_0001599 3300047472 Bacteria 23920
273 Ga0496121_0023886 3300048924 Bacteria 5866
274 Ga0496126_0000063 3300048929 Bacteria 256841
275 Ga0501034_0024893 3300049571 Bacteria 6091
276 Ga0501034_0282877 3300049571 Bacteria 1598
277 Ga0501046_0165268 3300049580 Bacteria 1663
278 Ga0501047_0003897 3300049581 Bacteria 14024
279 Ga0501077_0172686 3300049593 Bacteria 1373
280 Ga0501079_0298919 3300049741 Bacteria 1259
281 Ga0501044_0022726 3300049823 Bacteria 6678
282 nmdc:mga06z11_89045_c1 3300050494 Bacteria 1672
283 nmdc:mga0sz30_29909_c1 3300050516 Bacteria 2248
284 Ga0500622_0054052 3300053156 Bacteria 2060
285 Ga0500634_0082538 3300053161 Bacteria 1652

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300028577 Ga0265318_10006130 Ga0265318_100061304 315
2 3300031240 Ga0265320_10023230 Ga0265320_100232303 315
3 3300031241 Ga0265325_10001545 Ga0265325_100015453 315
4 3300031344 Ga0265316_10068647 Ga0265316_100686473 315
5 3300031595 Ga0265313_10001657 Ga0265313_100016574 315
6 3300031595 Ga0265313_10006250 Ga0265313_100062508 315
7 3300031712 Ga0265342_10003055 Ga0265342_100030554 315
8 3300003323 rootH1_10073660 rootH1_100736602 322
9 3300013104 Ga0157370_10000029 Ga0157370_100000298 328
10 3300015261 Ga0182006_1005462 Ga0182006_10054623 328
11 3300050494 nmdc:mga06z11_89045_c1 nmdc:mga06z11_89045_c1_342_1622 328
12 3300050516 nmdc:mga0sz30_29909_c1 nmdc:mga0sz30_29909_c1_504_1784 328
13 3300006178 Ga0075367_10018766 Ga0075367_100187662 329
14 3300015261 Ga0182006_1007229 Ga0182006_10072292 329
15 3300013100 Ga0157373_10000010 Ga0157373_1000001099 330
16 3300003203 JGI25406J46586_10004354 JGI25406J46586_100043543 335
17 3300005985 Ga0081539_10003178 Ga0081539_100031786 335
18 3300053156 Ga0500622_0054052 Ga0500622_0054052_474_1697 338
19 3300005329 Ga0070683_100000416 Ga0070683_10000041615 339
20 3300005616 Ga0068852_100029976 Ga0068852_1000299763 339
21 3300049741 Ga0501079_0298919 Ga0501079_0298919_14_1117 341
22 3300005535 Ga0070684_100010866 Ga0070684_1000108664 346
23 3300005563 Ga0068855_100000630 Ga0068855_10000063035 346
24 3300009093 Ga0105240_10001517 Ga0105240_1000151714 346
25 3300010375 Ga0105239_10026024 Ga0105239_100260244 346
26 3300013104 Ga0157370_10000106 Ga0157370_1000010621 346
27 3300025913 Ga0207695_10000110 Ga0207695_10000110174 346
28 3300025944 Ga0207661_10017050 Ga0207661_100170502 346
29 3300025949 Ga0207667_10012201 Ga0207667_100122012 346
30 3300026067 Ga0207678_10001999 Ga0207678_100019996 346
31 3300026142 Ga0207698_10033455 Ga0207698_100334553 346
32 3300031344 Ga0265316_10149813 Ga0265316_101498132 347
33 3300031507 Ga0307509_10021070 Ga0307509_100210706 348
34 3300005356 Ga0070674_100217267 Ga0070674_1002172671 349
35 3300005530 Ga0070679_100317889 Ga0070679_1003178891 349
36 3300010375 Ga0105239_10002831 Ga0105239_1000283115 349
37 3300013102 Ga0157371_10004980 Ga0157371_100049809 349
38 3300032005 Ga0307411_10001416 Ga0307411_100014163 350
39 3300037853 Ga0436364_1265702 Ga0436364_1265702_619_1746 351
40 3300013104 Ga0157370_10052662 Ga0157370_100526621 352
41 3300013296 Ga0157374_10000001 Ga0157374_10000001144 352
42 3300046471 Ga0495650_0027106 Ga0495650_0027106_24_1151 352
43 3300005983 Ga0081540_1014264 Ga0081540_10142643 353
44 3300048924 Ga0496121_0023886 Ga0496121_0023886_3915_5048 353
45 3300013307 Ga0157372_10577182 Ga0157372_105771822 354
46 3300037466 Ga0395898_0344062 Ga0395898_0344062_30_1202 354
47 3300048929 Ga0496126_0000063 Ga0496126_0000063_103073_104248 354
48 3300025272 Ga0209455_1004206 Ga0209455_10042062 355
49 3300005539 Ga0068853_100102768 Ga0068853_1001027681 356
50 3300009093 Ga0105240_10014812 Ga0105240_100148125 356
51 3300013104 Ga0157370_10004121 Ga0157370_1000412112 356
52 3300013105 Ga0157369_10042557 Ga0157369_100425571 356
53 3300025904 Ga0207647_10022452 Ga0207647_100224524 356
54 3300003320 rootH2_10003541 rootH2_1000354110 357
55 3300015261 Ga0182006_1007540 Ga0182006_10075403 359
56 3300031731 Ga0307405_10000001 Ga0307405_100000011039 359
57 3300002773 JGI25152J39213_1000476 JGI25152J39213_100047610 361
58 3300002774 JGI25150J39212_1000002 JGI25150J39212_1000002231 361
59 3300003187 JGI25151J46595_10000003 JGI25151J46595_10000003428 361
60 3300003215 JGI25153J46596_10000003 JGI25153J46596_10000003260 361
61 3300025245 Ga0207425_1000004 Ga0207425_1000004714 361
62 3300025258 Ga0209129_1000005 Ga0209129_1000005228 361
63 3300025294 Ga0209025_1000009 Ga0209025_1000009714 361
64 3300025297 Ga0209758_1000010 Ga0209758_1000010715 361
65 3300037312 Ga0395899_0035329 Ga0395899_0035329_1765_3012 362
66 3300037418 Ga0395900_0059587 Ga0395900_0059587_1944_3191 362
67 3300037466 Ga0395898_0015690 Ga0395898_0015690_1944_3191 362
68 3300037853 Ga0436364_0226250 Ga0436364_0226250_1267_2514 362
69 3300038443 Ga0395901_0085349 Ga0395901_0085349_1364_2611 362
70 3300047472 Ga0495686_0001599 Ga0495686_0001599_7517_8752 362
71 3300049581 Ga0501047_0003897 Ga0501047_0003897_146_1387 362
72 3300049823 Ga0501044_0022726 Ga0501044_0022726_5185_6426 362
73 3300047472 Ga0495686_0000004 Ga0495686_0000004_485707_486948 363
74 3300053161 Ga0500634_0082538 Ga0500634_0082538_397_1632 364
75 3300037471 Ga0395905_0010092 Ga0395905_0010092_2852_4018 365
76 3300005289 Ga0065704_10106996 Ga0065704_101069962 367
77 3300028653 Ga0265323_10008908 Ga0265323_100089083 367
78 3300005455 Ga0070663_100081654 Ga0070663_1000816542 368
79 3300013102 Ga0157371_10113617 Ga0157371_101136172 368
80 3300013105 Ga0157369_10080965 Ga0157369_100809654 368
81 3300013307 Ga0157372_10046228 Ga0157372_100462282 368
82 3300025909 Ga0207705_10034859 Ga0207705_100348595 368
83 3300026067 Ga0207678_10056222 Ga0207678_100562224 368
84 3300037466 Ga0395898_0083727 Ga0395898_0083727_685_1917 368
85 3300038443 Ga0395901_0084433 Ga0395901_0084433_354_1586 368
86 3300005530 Ga0070679_100010763 Ga0070679_10001076310 369
87 3300013105 Ga0157369_10007264 Ga0157369_1000726411 369
88 3300013307 Ga0157372_10046204 Ga0157372_100462041 369
89 3300025917 Ga0207660_10055044 Ga0207660_100550443 369
90 3300025921 Ga0207652_10000018 Ga0207652_1000001814 369
91 3300025949 Ga0207667_10001825 Ga0207667_100018254 369
92 3300037312 Ga0395899_0008880 Ga0395899_0008880_352_1575 369
93 3300037418 Ga0395900_0034243 Ga0395900_0034243_404_1633 369
94 3300037466 Ga0395898_0094490 Ga0395898_0094490_1366_2589 369
95 3300037471 Ga0395905_0014009 Ga0395905_0014009_975_2204 369
96 3300038443 Ga0395901_0322077 Ga0395901_0322077_327_1550 369
97 3300005328 Ga0070676_10170066 Ga0070676_101700661 370
98 3300005338 Ga0068868_100117095 Ga0068868_1001170953 370
99 3300013308 Ga0157375_10049673 Ga0157375_100496733 370
100 3300013104 Ga0157370_10062705 Ga0157370_100627053 372
101 3300025921 Ga0207652_10082605 Ga0207652_100826052 374
102 3300005331 Ga0070670_100082883 Ga0070670_1000828831 375
103 3300013102 Ga0157371_10008530 Ga0157371_100085306 375
104 3300021441 Ga0213871_10000552 Ga0213871_100005524 375
105 3300025925 Ga0207650_10063613 Ga0207650_100636132 375
106 3300039438 Ga0436360_0000771 Ga0436360_0000771_5520_6776 375
107 3300000545 CNXas_1000064 CNXas_100006417 376
108 3300015261 Ga0182006_1000419 Ga0182006_100041918 376
109 iso_pu_bacteria 2585427687 2586209932 376
110 iso_pu_bacteria 2738541302 2738855788 376
111 iso_pu_bacteria 2739367651 2739590166 376
112 iso_pu_bacteria 2739367663 2739644393 376
113 iso_pu_bacteria 2818991437 2819548449 376
114 iso_pu_bacteria 2842722452 2842722984 376
115 iso_pu_bacteria 2842909656 2842913938 376
116 iso_pu_bacteria 2849281842 2849283681 376
117 iso_pu_bacteria 2857627736 2857631232 376
118 iso_pu_bacteria 2904445276 2904449561 376
119 iso_pu_bacteria 2945997725 2945999949 376
120 iso_pu_bacteria 2954016120 2954016558 376
121 3300005577 Ga0068857_100012210 Ga0068857_1000122104 377
122 3300005578 Ga0068854_100043197 Ga0068854_1000431971 377
123 3300005614 Ga0068856_100023362 Ga0068856_1000233624 377
124 3300005616 Ga0068852_100001126 Ga0068852_1000011268 377
125 3300013297 Ga0157378_10083300 Ga0157378_100833003 377
126 3300013307 Ga0157372_10000596 Ga0157372_100005967 377
127 3300025949 Ga0207667_10000791 Ga0207667_1000079133 377
128 3300025981 Ga0207640_10048603 Ga0207640_100486033 377
129 3300026116 Ga0207674_10028595 Ga0207674_100285956 377
130 3300026142 Ga0207698_10003836 Ga0207698_100038364 377
131 3300013105 Ga0157369_10009715 Ga0157369_100097155 378
132 3300028558 Ga0265326_10017177 Ga0265326_100171772 378
133 3300028563 Ga0265319_1003034 Ga0265319_10030345 378
134 3300029957 Ga0265324_10037302 Ga0265324_100373022 378
135 3300031240 Ga0265320_10000900 Ga0265320_1000090014 378
136 3300031344 Ga0265316_10216221 Ga0265316_102162212 378
137 3300031712 Ga0265342_10039715 Ga0265342_100397151 378
138 3300037466 Ga0395898_0001660 Ga0395898_0001660_3395_4597 378
139 3300047443 Ga0495687_000001 Ga0495687_000001_267352_268608 378
140 3300028786 Ga0307517_10010902 Ga0307517_1001090210 379
141 3300044656 Ga0466969_0044913 Ga0466969_0044913_56_1288 379
142 3300045049 Ga0466959_0001399 Ga0466959_0001399_3256_4488 379
143 3300046648 Ga0495611_0000277 Ga0495611_0000277_2062_3318 379
144 3300003323 rootH1_10130425 rootH1_101304252 380
145 3300003781 Ga0055536_1000049 Ga0055536_100004979 380
146 3300003781 Ga0055536_1008393 Ga0055536_10083933 380
147 3300003791 Ga0055530_10002221 Ga0055530_100022218 380
148 3300005262 Ga0065165_1000023 Ga0065165_1000023120 380
149 3300005288 Ga0065714_10065418 Ga0065714_100654181 380
150 3300013100 Ga0157373_10017743 Ga0157373_100177435 380
151 3300013102 Ga0157371_10000119 Ga0157371_1000011920 380
152 3300013102 Ga0157371_10224525 Ga0157371_102245251 380
153 3300013104 Ga0157370_10011418 Ga0157370_100114184 380
154 3300013104 Ga0157370_10071497 Ga0157370_100714972 380
155 3300013105 Ga0157369_10000015 Ga0157369_1000001557 380
156 3300013306 Ga0163162_10002531 Ga0163162_100025316 380
157 3300014497 Ga0182008_10005531 Ga0182008_100055312 380
158 3300014497 Ga0182008_10019585 Ga0182008_100195852 380
159 3300015261 Ga0182006_1000352 Ga0182006_100035223 380
160 3300015262 Ga0182007_10000010 Ga0182007_10000010158 380
161 3300015262 Ga0182007_10005725 Ga0182007_100057252 380
162 3300015682 Ga0183373_1005 Ga0183373_1005258 380
163 3300017792 Ga0163161_10000390 Ga0163161_100003908 380
164 3300017792 Ga0163161_10000474 Ga0163161_1000047420 380
165 3300021388 Ga0213875_10061005 Ga0213875_100610052 380
166 3300025292 Ga0209676_1000001 Ga0209676_100000121 380
167 3300025292 Ga0209676_1000229 Ga0209676_100022931 380
168 3300025298 Ga0209050_1000258 Ga0209050_100025878 380
169 3300025986 Ga0207658_10224024 Ga0207658_102240241 380
170 3300031731 Ga0307405_10000035 Ga0307405_1000003575 380
171 3300031903 Ga0307407_10000120 Ga0307407_100001206 380
172 3300031995 Ga0307409_100033288 Ga0307409_1000332884 380
173 3300032002 Ga0307416_100000037 Ga0307416_1000000376 380
174 3300032004 Ga0307414_10024755 Ga0307414_100247552 380
175 3300046512 Ga0495610_0000045 Ga0495610_0000045_20128_21330 380
176 3300046512 Ga0495610_0000329 Ga0495610_0000329_14634_15836 380
177 3300046558 Ga0495633_0028959 Ga0495633_0028959_887_2089 380
178 3300046558 Ga0495633_0105220 Ga0495633_0105220_50_1252 380
179 iso_pu_bacteria 2739367656 2739615391 380
180 iso_pu_bacteria 2923525760 2923526465 380
181 3300009148 Ga0105243_10063816 Ga0105243_100638162 381
182 3300013104 Ga0157370_10074884 Ga0157370_100748843 381
183 3300013307 Ga0157372_10031399 Ga0157372_100313992 381
184 3300031507 Ga0307509_10002247 Ga0307509_1000224716 381
185 3300035692 Ga0373935_0019635 Ga0373935_0019635_580_1851 381
186 3300035725 Ga0373947_0112114 Ga0373947_0112114_308_1579 381
187 3300037853 Ga0436364_0261825 Ga0436364_0261825_2869_4140 381
188 3300046530 Ga0495654_0006856 Ga0495654_0006856_4873_6108 381
189 3300046694 Ga0495649_0069544 Ga0495649_0069544_26_1267 381
190 iso_pu_bacteria 2858950400 2858951180 381
191 iso_pu_bacteria 2928147474 2928148537 381
192 3300005341 Ga0070691_10035454 Ga0070691_100354541 382
193 3300005563 Ga0068855_100233293 Ga0068855_1002332932 382
194 3300009545 Ga0105237_10031794 Ga0105237_100317945 382
195 3300010375 Ga0105239_10000048 Ga0105239_10000048159 382
196 3300025914 Ga0207671_10151849 Ga0207671_101518492 382
197 3300025949 Ga0207667_10196940 Ga0207667_101969402 382
198 3300031901 Ga0307406_10058674 Ga0307406_100586743 382
199 iso_pu_bacteria 2919186247 2919187710 382
200 iso_pu_bacteria 2939664404 2939665023 382
201 3300005327 Ga0070658_10022313 Ga0070658_100223133 383
202 3300005336 Ga0070680_100218275 Ga0070680_1002182752 383
203 3300005339 Ga0070660_100004486 Ga0070660_1000044863 383
204 3300005366 Ga0070659_100005578 Ga0070659_1000055783 383
205 3300005366 Ga0070659_100011025 Ga0070659_1000110257 383
206 3300005435 Ga0070714_100000587 Ga0070714_10000058715 383
207 3300005458 Ga0070681_10021793 Ga0070681_100217932 383
208 3300005458 Ga0070681_10066470 Ga0070681_100664702 383
209 3300005530 Ga0070679_100002217 Ga0070679_1000022173 383
210 3300005530 Ga0070679_100006575 Ga0070679_1000065758 383
211 3300005530 Ga0070679_100018343 Ga0070679_1000183436 383
212 3300005563 Ga0068855_100001137 Ga0068855_10000113711 383
213 3300005563 Ga0068855_100048938 Ga0068855_1000489384 383
214 3300005563 Ga0068855_100053743 Ga0068855_1000537434 383
215 3300005577 Ga0068857_100038830 Ga0068857_1000388304 383
216 3300009093 Ga0105240_10003329 Ga0105240_1000332916 383
217 3300009093 Ga0105240_10136309 Ga0105240_101363092 383
218 3300009177 Ga0105248_10000003 Ga0105248_10000003737 383
219 3300013100 Ga0157373_10003302 Ga0157373_100033028 383
220 3300013100 Ga0157373_10030239 Ga0157373_100302394 383
221 3300013100 Ga0157373_10035093 Ga0157373_100350933 383
222 3300013102 Ga0157371_10000178 Ga0157371_1000017816 383
223 3300013102 Ga0157371_10001606 Ga0157371_100016064 383
224 3300013102 Ga0157371_10002157 Ga0157371_1000215716 383
225 3300013102 Ga0157371_10013828 Ga0157371_100138282 383
226 3300013104 Ga0157370_10000473 Ga0157370_1000047330 383
227 3300013104 Ga0157370_10002012 Ga0157370_100020123 383
228 3300013104 Ga0157370_10008808 Ga0157370_100088086 383
229 3300013104 Ga0157370_10028555 Ga0157370_100285553 383
230 3300013105 Ga0157369_10029919 Ga0157369_100299194 383
231 3300013297 Ga0157378_10166547 Ga0157378_101665472 383
232 3300013307 Ga0157372_10005009 Ga0157372_100050097 383
233 3300013307 Ga0157372_10069983 Ga0157372_100699834 383
234 3300013307 Ga0157372_10121314 Ga0157372_101213142 383
235 3300025909 Ga0207705_10032105 Ga0207705_100321052 383
236 3300025912 Ga0207707_10012003 Ga0207707_100120031 383
237 3300025912 Ga0207707_10050258 Ga0207707_100502583 383
238 3300025913 Ga0207695_10003609 Ga0207695_100036097 383
239 3300025913 Ga0207695_10034020 Ga0207695_100340203 383
240 3300025917 Ga0207660_10170783 Ga0207660_101707831 383
241 3300025917 Ga0207660_10197430 Ga0207660_101974301 383
242 3300025919 Ga0207657_10013880 Ga0207657_100138804 383
243 3300025921 Ga0207652_10000121 Ga0207652_1000012170 383
244 3300025921 Ga0207652_10151232 Ga0207652_101512322 383
245 3300025929 Ga0207664_10005311 Ga0207664_100053115 383
246 3300025932 Ga0207690_10019478 Ga0207690_100194784 383
247 3300025949 Ga0207667_10002129 Ga0207667_100021295 383
248 3300025949 Ga0207667_10092416 Ga0207667_100924162 383
249 3300025949 Ga0207667_10322402 Ga0207667_103224022 383
250 3300026041 Ga0207639_10021372 Ga0207639_100213724 383
251 3300026116 Ga0207674_10027468 Ga0207674_100274685 383
252 3300031616 Ga0307508_10084637 Ga0307508_100846373 383
253 3300033544 Ga0316215_1001065 Ga0316215_10010652 383
254 3300037312 Ga0395899_0002066 Ga0395899_0002066_14535_15770 383
255 3300037418 Ga0395900_0034664 Ga0395900_0034664_1144_2367 383
256 3300037466 Ga0395898_0001441 Ga0395898_0001441_8487_9722 383
257 3300037466 Ga0395898_0007181 Ga0395898_0007181_5162_6496 383
258 3300037466 Ga0395898_0052373 Ga0395898_0052373_919_2148 383
259 3300037471 Ga0395905_0116765 Ga0395905_0116765_698_1921 383
260 3300038443 Ga0395901_0014638 Ga0395901_0014638_2511_3845 383
261 3300039437 Ga0436365_0376487 Ga0436365_0376487_286_1569 383
262 3300049571 Ga0501034_0024893 Ga0501034_0024893_4262_5488 383
263 3300049571 Ga0501034_0282877 Ga0501034_0282877_301_1530 383
264 iso_pu_bacteria 2852627209 2852627537 383
265 iso_pu_bacteria 2855730933 2855733854 383
266 iso_pu_bacteria 2855767633 2855769444 383
267 iso_pu_bacteria 2881412998 2881413922 383
268 iso_pu_bacteria 2910245624 2910249251 383
269 iso_pu_bacteria 2941479691 2941480739 383
270 3300003322 rootL2_10215524 rootL2_102155242 384
271 3300013105 Ga0157369_10278448 Ga0157369_102784482 384
272 3300013307 Ga0157372_10002035 Ga0157372_100020352 384
273 3300037853 Ga0436364_0434061 Ga0436364_0434061_12_1247 384
274 3300039437 Ga0436365_0967942 Ga0436365_0967942_490_1740 384
275 3300044658 Ga0466972_0020326 Ga0466972_0020326_1471_2694 384
276 3300046492 Ga0495585_0000132 Ga0495585_0000132_28198_29430 384
277 3300046513 Ga0495616_0066166 Ga0495616_0066166_403_1632 384
278 3300046660 Ga0495625_0000125 Ga0495625_0000125_119299_120528 384
279 3300046694 Ga0495649_0000044 Ga0495649_0000044_119294_120523 384
280 3300049580 Ga0501046_0165268 Ga0501046_0165268_373_1608 384
281 3300049593 Ga0501077_0172686 Ga0501077_0172686_127_1362 384
282 3300003320 rootH2_10116037 rootH2_101160372 385
283 3300005539 Ga0068853_100001585 Ga0068853_1000015856 385
284 3300005843 Ga0068860_100000046 Ga0068860_100000046109 385
285 3300009093 Ga0105240_10000195 Ga0105240_100001952 385
286 3300009093 Ga0105240_10000698 Ga0105240_1000069848 385
287 3300009093 Ga0105240_10129751 Ga0105240_101297512 385
288 3300009174 Ga0105241_10040727 Ga0105241_100407272 385
289 3300009545 Ga0105237_10018768 Ga0105237_100187683 385
290 3300010375 Ga0105239_10078746 Ga0105239_100787462 385
291 3300025913 Ga0207695_10000023 Ga0207695_1000002338 385
292 3300025913 Ga0207695_10000229 Ga0207695_10000229103 385
293 3300025913 Ga0207695_10115883 Ga0207695_101158832 385
294 2162886007 SwRhRL2b_contig_2387710 SwRhRL2b_0452.00004010 386
295 3300005614 Ga0068856_100096994 Ga0068856_1000969943 386
296 3300009093 Ga0105240_10000021 Ga0105240_1000002178 386
297 3300009093 Ga0105240_10087685 Ga0105240_100876852 386
298 3300009148 Ga0105243_10000008 Ga0105243_10000008311 386
299 3300009174 Ga0105241_10000231 Ga0105241_100002315 386
300 3300009545 Ga0105237_10008788 Ga0105237_100087885 386
301 3300009551 Ga0105238_10004513 Ga0105238_100045135 386
302 3300010375 Ga0105239_10019190 Ga0105239_100191905 386
303 3300025911 Ga0207654_10006786 Ga0207654_100067862 386
304 3300025913 Ga0207695_10000083 Ga0207695_1000008376 386
305 3300025913 Ga0207695_10002425 Ga0207695_1000242511 386
306 3300025914 Ga0207671_10003761 Ga0207671_100037616 386
307 3300025935 Ga0207709_10000006 Ga0207709_10000006167 386
308 3300026078 Ga0207702_10071757 Ga0207702_100717572 386
309 3300030521 Ga0307511_10000285 Ga0307511_1000028533 386

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

283

444

0.92

PF07690

MFS_1

Major Facilitator Superfamily

57

397

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jtc-assembly1.cif.gz_A human vmat2 complex with reserpine 0.7782 18 380
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.7724 18 381
6kkk-assembly3.cif.gz_C crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation (h115a mutant) 0.7713 19 376
7yub-assembly1.cif.gz_R s1p-bound human spns2 0.7613 13 377
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.759 18 377
ID Description Score Start End Superfamily
af_P52067_222_406_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9612 209 383 1.20.1250.20
af_P52067_222_406_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9053 209 383 1.20.1250.20
af_P52067_17_206_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9009 12 187 1.20.1250.20
af_E7F467_280_468_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8907 215 377 1.20.1250.20
af_O69695_42_237_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.881 22 171 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A4Y4D6G0-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.8751 225 382 GO:0016020
GO:0022857
AF-A0A6G3VUH5-F1-model_v4 deleted 0.8597 21 171
AF-A0A7J4P113-F1-model_v4 MFS transporter 0.8573 21 377 GO:0016020
GO:0022857
AF-A0A2E1BD54-F1-model_v4 MFS transporter 0.8469 1 385 GO:0005886
GO:0022857
AF-A0A2E1BD54-F1-model_v4 MFS transporter 0.8427 1 385 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
80.27 0.8 High
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Predicted Structure (AlphaFold2)

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