F399778

General Info

Members Datasets Scaffolds Average Seq Length
308 194 616 226

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0008951|Ga0395900_0008951_1829_2557
Length 242
Sequence VAQEALPTDPRTSQAEPTLSRSSAYTTLAPGGGFRHEIDIKRSRFITVLRRVDNEEDARALVSELRREFHDAGHHCSAFVLGPDRDVQRSSDDGEPSGTAGIPMLEALIRRETAPGVTDLSDVSAVVVRYFGGILLGAGGLVRAYSDSVSTALELAPMVQRRRLRICAVRVAHAAAGRLENDLRSAGYAMAETGYEAQSTVLRLALPDAPGDLAAAADRLAAMTSGSAELQPEGTEWIDIPR

Samples

Sample ID Description Type Environment
1 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
16 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
17 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
18 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
19 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
20 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
21 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
22 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
24 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
26 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
27 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
38 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
39 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
42 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
43 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
44 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
48 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
49 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
50 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
51 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
52 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
53 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
54 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
55 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
56 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
57 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
58 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
59 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
60 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
61 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
62 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
63 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
64 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
65 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
66 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
67 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
68 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
69 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
70 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
71 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
72 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
73 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
74 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
75 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
76 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
77 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
78 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
79 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
80 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
81 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
82 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
83 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
84 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
85 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
88 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
89 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
90 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
91 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
92 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
93 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
94 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
97 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
98 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
99 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
100 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
101 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
102 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
103 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
104 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
105 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
106 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
107 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
134 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
135 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
136 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
140 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
141 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
144 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
145 2643221641 Nocardioides sp. Root122 Isolate Unclassified
146 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
147 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
148 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
149 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
150 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
151 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
152 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
153 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
154 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
155 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
156 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
157 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
158 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
159 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
160 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
161 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
162 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
163 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
164 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
165 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
166 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
167 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
168 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
169 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
170 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
171 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
172 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
173 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
174 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
175 2920879853 Kocuria salina CV6 Isolate Unclassified
176 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
177 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
178 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
179 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
180 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
181 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
182 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
183 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
184 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
185 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
186 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
187 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
188 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
189 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
190 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
191 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
192 8054357960 Idiomarina rhizosphaerae M1R2S28 Isolate Rhizosphere
193 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
194 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.12
Metatranscriptomes 0
Isolates 16.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.22
Nodule 0.32
Rhizoplane 6.82
Rhizosphere 80.52
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395900_0008951 3300037418 Bacteria 10266
2 LJQas_1002628 3300000549 Bacteria 2476
3 JGI25152J39213_1000124 3300002773 Bacteria 52334
4 JGI25151J46595_10059556 3300003187 Bacteria 1228
5 Ga0055532_1000989 3300003758 Bacteria 8935
6 Ga0070670_100577523 3300005331 Bacteria 1004
7 Ga0070669_100047426 3300005353 Bacteria 3134
8 Ga0070671_100305945 3300005355 Bacteria 1353
9 Ga0070674_100152546 3300005356 Bacteria 1745
10 Ga0070667_100648380 3300005367 Bacteria 975
11 Ga0070678_100003890 3300005456 Bacteria 8390
12 Ga0070672_100099748 3300005543 Bacteria 2354
13 Ga0068860_100007309 3300005843 Bacteria 11043
14 Ga0068860_101804775 3300005843 Bacteria 633
15 Ga0075365_10052049 3300006038 Bacteria 2707
16 Ga0105251_10040058 3300009011 Bacteria 2285
17 Ga0105244_10016573 3300009036 Bacteria 4194
18 Ga0105244_10029689 3300009036 Bacteria 2918
19 Ga0105244_10043615 3300009036 Bacteria 2313
20 Ga0105243_10256064 3300009148 Bacteria 1565
21 Ga0105246_10027609 3300011119 Bacteria 3722
22 Ga0105246_10038010 3300011119 Bacteria 3233
23 Ga0105246_10117386 3300011119 Bacteria 1966
24 Ga0157370_10590746 3300013104 Bacteria 1017
25 Ga0157369_10282971 3300013105 Bacteria 1727
26 Ga0163162_10050972 3300013306 Bacteria 4152
27 Ga0163162_10316606 3300013306 Bacteria 1693
28 Ga0209147_100101 3300025229 Bacteria 161976
29 Ga0207425_1013088 3300025245 Bacteria 1926
30 Ga0209148_1001288 3300025254 Bacteria 13617
31 Ga0209129_1000067 3300025258 Bacteria 219974
32 Ga0209025_1000971 3300025294 Bacteria 42988
33 Ga0209051_1034020 3300025303 Bacteria 1916
34 Ga0209051_1052130 3300025303 Bacteria 1354
35 Ga0207655_1005022 3300025728 Bacteria 9155
36 Ga0207655_1023262 3300025728 Bacteria 3079
37 Ga0207645_10186765 3300025907 Bacteria 1361
38 Ga0207681_10051375 3300025923 Bacteria 2793
39 Ga0207650_10054917 3300025925 Bacteria 2956
40 Ga0207669_10349373 3300025937 Bacteria 1142
41 Ga0207691_10000138 3300025940 Bacteria 66608
42 Ga0207683_10012765 3300026121 Bacteria 7170
43 Ga0209371_1002410 3300027312 Bacteria 10508
44 Ga0268264_10005484 3300028381 Bacteria 10756
45 Ga0268256_1002236 3300030500 Bacteria 10161
46 Ga0307408_100026408 3300031548 Bacteria 3989
47 Ga0307408_100080220 3300031548 Bacteria 2437
48 Ga0307408_100104506 3300031548 Bacteria 2164
49 Ga0307408_100114927 3300031548 Bacteria 2074
50 Ga0307408_100174418 3300031548 Bacteria 1719
51 Ga0307408_100252898 3300031548 Bacteria 1454
52 Ga0307408_100370235 3300031548 Bacteria 1222
53 Ga0307408_100512144 3300031548 Bacteria 1052
54 Ga0307408_100796070 3300031548 Bacteria 857
55 Ga0307405_10002265 3300031731 Bacteria 8418
56 Ga0307405_10015791 3300031731 Bacteria 4099
57 Ga0307405_10069769 3300031731 Bacteria 2254
58 Ga0307405_10105731 3300031731 Bacteria 1897
59 Ga0307405_10136931 3300031731 Bacteria 1701
60 Ga0307405_10246468 3300031731 Bacteria 1326
61 Ga0307413_10040180 3300031824 Bacteria 2728
62 Ga0307413_10054741 3300031824 Bacteria 2423
63 Ga0307413_10212221 3300031824 Bacteria 1407
64 Ga0307410_10003297 3300031852 Bacteria 8065
65 Ga0307410_10041458 3300031852 Bacteria 3036
66 Ga0307410_10125044 3300031852 Bacteria 1881
67 Ga0307410_10187653 3300031852 Bacteria 1570
68 Ga0307410_10235854 3300031852 Bacteria 1415
69 Ga0307410_10402194 3300031852 Bacteria 1107
70 Ga0307406_10057843 3300031901 Bacteria 2489
71 Ga0307406_10089320 3300031901 Bacteria 2070
72 Ga0307407_10072023 3300031903 Bacteria 2060
73 Ga0307407_10099789 3300031903 Bacteria 1799
74 Ga0307407_10158141 3300031903 Bacteria 1480
75 Ga0307407_10408361 3300031903 Bacteria 976
76 Ga0307412_10020990 3300031911 Bacteria 3983
77 Ga0307412_10057369 3300031911 Bacteria 2599
78 Ga0307412_10062500 3300031911 Bacteria 2507
79 Ga0307412_10064898 3300031911 Bacteria 2468
80 Ga0307412_10126808 3300031911 Bacteria 1847
81 Ga0307412_10289665 3300031911 Bacteria 1289
82 Ga0307409_100080524 3300031995 Bacteria 2628
83 Ga0307409_100113337 3300031995 Bacteria 2279
84 Ga0307409_100172650 3300031995 Bacteria 1904
85 Ga0307409_100262316 3300031995 Bacteria 1586
86 Ga0307409_100264143 3300031995 Bacteria 1581
87 Ga0307409_101247713 3300031995 Bacteria 767
88 Ga0307416_100048957 3300032002 Bacteria 3357
89 Ga0307416_100056291 3300032002 Bacteria 3173
90 Ga0307416_100117690 3300032002 Bacteria 2359
91 Ga0307416_100123678 3300032002 Bacteria 2312
92 Ga0307416_100133715 3300032002 Bacteria 2239
93 Ga0307416_100178843 3300032002 Bacteria 1986
94 Ga0307416_100400121 3300032002 Bacteria 1410
95 Ga0307416_100412775 3300032002 Bacteria 1391
96 Ga0307414_10075020 3300032004 Bacteria 2453
97 Ga0307411_10088844 3300032005 Bacteria 2151
98 Ga0307411_10107231 3300032005 Bacteria 1990
99 Ga0307415_100086492 3300032126 Bacteria 2256
100 Ga0307415_100180630 3300032126 Bacteria 1655
101 Ga0307415_100206246 3300032126 Bacteria 1564
102 Ga0307415_100656434 3300032126 Bacteria 941
103 Ga0395899_0006430 3300037312 Bacteria 9103
104 Ga0395899_0090710 3300037312 Bacteria 2215
105 Ga0395900_0049538 3300037418 Bacteria 4328
106 Ga0395900_0095320 3300037418 Bacteria 3058
107 Ga0395900_0098728 3300037418 Bacteria 3000
108 Ga0395900_0203773 3300037418 Bacteria 2000
109 Ga0395900_0364217 3300037418 Bacteria 1416
110 Ga0395898_0014223 3300037466 Bacteria 8182
111 Ga0395898_0030878 3300037466 Bacteria 5359
112 Ga0395898_0034970 3300037466 Bacteria 5000
113 Ga0395898_0103123 3300037466 Bacteria 2737
114 Ga0395898_0447685 3300037466 Bacteria 1230
115 Ga0395905_0009094 3300037471 Bacteria 9738
116 Ga0395901_0038746 3300038443 Bacteria 4930
117 Ga0395901_0169339 3300038443 Bacteria 2292
118 Ga0395901_0264562 3300038443 Bacteria 1789
119 Ga0395901_0434608 3300038443 Bacteria 1344
120 Ga0395901_0467753 3300038443 Bacteria 1287
121 Ga0395901_0473461 3300038443 Bacteria 1278
122 Ga0439436_0024001 3300041404 Bacteria 1802
123 Ga0439436_0025819 3300041404 Bacteria 1724
124 Ga0439436_0031865 3300041404 Bacteria 1529
125 Ga0439436_0039545 3300041404 Bacteria 1354
126 Ga0439438_001589 3300041405 Bacteria 9978
127 Ga0439439_0006487 3300041406 Bacteria 2706
128 Ga0439461_0022266 3300041410 Bacteria 1268
129 Ga0439461_0027449 3300041410 Bacteria 1167
130 Ga0439466_0027045 3300041411 Bacteria 1989
131 Ga0439433_0000591 3300041999 Bacteria 6897
132 Ga0439433_0005972 3300041999 Bacteria 2617
133 Ga0439433_0017306 3300041999 Bacteria 1600
134 Ga0439442_010543 3300042002 Bacteria 1875
135 Ga0439432_000885 3300042006 Bacteria 11237
136 Ga0439449_0004293 3300042007 Bacteria 5504
137 Ga0439449_0005221 3300042007 Bacteria 4982
138 Ga0439449_0015504 3300042007 Bacteria 2864
139 Ga0439457_032606 3300042014 Bacteria 1156
140 Ga0439462_0000270 3300042015 Bacteria 9462
141 Ga0439462_0012895 3300042015 Bacteria 2139
142 Ga0450919_001035 3300042121 Bacteria 3598
143 Ga0450920_002017 3300042122 Bacteria 3430
144 Ga0450920_002244 3300042122 Bacteria 3273
145 Ga0450920_013382 3300042122 Bacteria 1545
146 Ga0450920_023409 3300042122 Bacteria 1197
147 Ga0450907_003660 3300042146 Bacteria 2714
148 Ga0439446_0003097 3300042156 Bacteria 4085
149 Ga0450908_001486 3300042184 Bacteria 4549
150 Ga0439434_0002026 3300042435 Bacteria 5854
151 Ga0439434_0002367 3300042435 Bacteria 5473
152 Ga0439434_0013437 3300042435 Bacteria 2432
153 Ga0450918_004225 3300042531 Bacteria 2630
154 Ga0450918_007690 3300042531 Bacteria 1903
155 Ga0466972_0022484 3300044658 Bacteria 3140
156 Ga0466965_0001223 3300044683 Bacteria 10160
157 Ga0466970_0107233 3300044765 Bacteria 1524
158 Ga0466957_0029842 3300044842 Bacteria 3254
159 Ga0466960_0045468 3300044901 Bacteria 2097
160 Ga0466958_0258418 3300045836 Bacteria 1115
161 Ga0495580_0001442 3300046472 Bacteria 20833
162 Ga0495580_0415223 3300046472 Bacteria 906
163 Ga0495582_0317906 3300046473 Bacteria 896
164 Ga0495639_0015858 3300046475 Bacteria 3267
165 Ga0495639_0193747 3300046475 Bacteria 993
166 Ga0495662_0028632 3300046476 Bacteria 2689
167 Ga0495594_0054912 3300046499 Bacteria 2196
168 Ga0495631_0028338 3300046518 Bacteria 2555
169 Ga0495642_0017914 3300046528 Bacteria 2769
170 Ga0495642_0071635 3300046528 Bacteria 1450
171 Ga0495665_0001329 3300046531 Bacteria 13191
172 Ga0495665_0225145 3300046531 Bacteria 969
173 Ga0495586_0003057 3300046535 Bacteria 9021
174 Ga0495586_0023127 3300046535 Bacteria 3318
175 Ga0495587_0000295 3300046536 Bacteria 35493
176 Ga0495645_0004137 3300046543 Bacteria 9910
177 Ga0495645_0216394 3300046543 Bacteria 1291
178 Ga0495622_0017955 3300046557 Bacteria 3295
179 Ga0495633_0024717 3300046558 Bacteria 2965
180 Ga0495667_0004212 3300046559 Bacteria 9693
181 Ga0495656_0021444 3300046615 Bacteria 2515
182 Ga0495668_0018009 3300046616 Bacteria 4089
183 Ga0495588_0003405 3300046674 Bacteria 6910
184 Ga0495588_0005125 3300046674 Bacteria 5819
185 Ga0495588_0009309 3300046674 Bacteria 4536
186 Ga0495588_0060619 3300046674 Bacteria 1958
187 Ga0495588_0190421 3300046674 Bacteria 1083
188 Ga0495657_0042411 3300046675 Bacteria 3107
189 Ga0495623_0142043 3300046679 Bacteria 1427
190 Ga0495670_0016447 3300046691 Bacteria 3635
191 Ga0495670_0256659 3300046691 Bacteria 932
192 Ga0495671_0235417 3300046692 Bacteria 885
193 Ga0495600_0040281 3300046809 Bacteria 3042
194 Ga0495600_0044655 3300046809 Bacteria 2890
195 Ga0495581_0009593 3300047315 Bacteria 5598
196 Ga0495581_0043370 3300047315 Bacteria 2601
197 Ga0495581_0066844 3300047315 Bacteria 2078
198 Ga0495604_0235960 3300047317 Bacteria 1253
199 Ga0495636_0006018 3300047318 Bacteria 4760
200 Ga0495680_0029053 3300047322 Bacteria 4530
201 Ga0495680_0143177 3300047322 Bacteria 1748
202 Ga0495675_0003818 3300047444 Bacteria 9125
203 Ga0495685_104938 3300047447 Bacteria 932
204 Ga0495681_0027696 3300047470 Bacteria 2927
205 Ga0496100_0379299 3300048903 Bacteria 1073
206 Ga0496101_0035796 3300048904 Bacteria 3512
207 Ga0496101_0217610 3300048904 Bacteria 1481
208 Ga0496102_0178613 3300048905 Bacteria 1999
209 Ga0496102_0462652 3300048905 Bacteria 1189
210 Ga0496102_0564673 3300048905 Bacteria 1060
211 Ga0496102_0850793 3300048905 Bacteria 834
212 Ga0496103_0348272 3300048906 Bacteria 952
213 Ga0496106_0096247 3300048909 Bacteria 2290
214 Ga0496107_0071004 3300048910 Bacteria 2529
215 Ga0496107_0471422 3300048910 Bacteria 932
216 Ga0496108_0239117 3300048911 Bacteria 1579
217 Ga0496108_0459136 3300048911 Bacteria 1113
218 Ga0496110_0036282 3300048913 Bacteria 4280
219 Ga0496110_0154648 3300048913 Bacteria 2077
220 Ga0496111_0186830 3300048914 Bacteria 1540
221 Ga0496112_0005227 3300048915 Bacteria 11174
222 Ga0496112_0035672 3300048915 Bacteria 4847
223 Ga0496112_0196908 3300048915 Bacteria 1975
224 Ga0496114_0754603 3300048917 Bacteria 850
225 Ga0496115_0053633 3300048918 Bacteria 3236
226 Ga0496125_0035890 3300048928 Bacteria 4339
227 Ga0501031_0008726 3300049568 Bacteria 6592
228 Ga0501032_0011322 3300049569 Bacteria 6405
229 Ga0501032_0017527 3300049569 Bacteria 5027
230 Ga0501032_0386763 3300049569 Bacteria 899
231 Ga0501034_0000016 3300049571 Bacteria 289751
232 Ga0501036_0027797 3300049572 Bacteria 4781
233 Ga0501037_0010170 3300049573 Bacteria 6902
234 Ga0501037_0309702 3300049573 Bacteria 1095
235 Ga0501038_0012225 3300049574 Bacteria 7839
236 Ga0501038_0115442 3300049574 Bacteria 2219
237 Ga0501038_0436202 3300049574 Bacteria 1009
238 Ga0501039_0021729 3300049575 Bacteria 4923
239 Ga0501039_0057801 3300049575 Bacteria 3003
240 Ga0501039_0097967 3300049575 Bacteria 2287
241 Ga0501040_0015044 3300049576 Bacteria 5113
242 Ga0501043_0060792 3300049579 Bacteria 2966
243 Ga0501048_0050636 3300049582 Bacteria 2957
244 Ga0501071_0035037 3300049587 Bacteria 3574
245 Ga0501072_0043993 3300049588 Bacteria 3511
246 Ga0501073_0221750 3300049589 Bacteria 1306
247 Ga0501074_0062957 3300049590 Bacteria 2672
248 Ga0501075_0152011 3300049591 Bacteria 1764
249 Ga0501076_0405244 3300049592 Bacteria 1121
250 Ga0501077_0049542 3300049593 Bacteria 2669
251 Ga0501035_0057098 3300049822 Bacteria 3481
252 Ga0501045_0015843 3300049824 Bacteria 5347
253 nmdc:mga00v17_7463_c1 3300050491 Bacteria 5836
254 nmdc:mga0yw44_23918_c1 3300050492 Bacteria 3449
255 Ga0495655_0009658 3300053083 Bacteria 1878
256 Ga0501084_0108493 3300054114 Bacteria 2332
257 2511176974 2510917027 Bacteria 5287437
258 2512638152 2512564013 Bacteria 6286191
259 2644230952 2643221641 Bacteria 4490190
260 2691513794 2690315906 Bacteria 4517044
261 2739204212 2738543005 Bacteria 5278128
262 2745165991 2744054657 Bacteria 5016802
263 2775658053 2775506735 Bacteria 4556596
264 2791923199 2791354903 Bacteria 4937680
265 2808831067 2808606357 Bacteria 4466944
266 2808852329 2808606360 Bacteria 4404006
267 2808891118 2808606370 Bacteria 4942454
268 2812321241 2811994871 Bacteria 4497550
269 2817509094 2816332305 Bacteria 2697803
270 2817620782 2816332336 Bacteria 5207640
271 2844852666 2844849076 Bacteria 4091819
272 2852104257 2852103415 Bacteria 5193810
273 2857465131 2857460504 Bacteria 5194327
274 2857471284 2857465823 Bacteria 6772595
275 2857597369 2857591370 Bacteria 6569758
276 2857742181 2857740372 Bacteria 4782044
277 2898910946 2898907183 Bacteria 4067722
278 2899367721 2899359706 Bacteria 10940472
279 2904498289 2904497146 Bacteria 4731781
280 2904777649 2904776348 Bacteria 4658726
281 2910811594 2910809715 Bacteria 4982797
282 2915597798 2915597211 Bacteria 6475886
283 2915610619 2915606848 Bacteria 6032732
284 2919035020 2919034639 Bacteria 4763403
285 2919051502 2919051321 Bacteria 4210889
286 2919059843 2919059106 Bacteria 4991624
287 2919395572 2919391150 Bacteria 4884741
288 2919540477 2919538618 Bacteria 4677069
289 2920882517 2920879853 Bacteria 4216831
290 2928145109 2928142448 Bacteria 5288925
291 2929189307 2929183550 Bacteria 6377511
292 2932428333 2932426870 Bacteria 4547726
293 2933422440 2933418574 Bacteria 4476724
294 2939648737 2939647034 Bacteria 4681660
295 2939675209 2939674588 Bacteria 4844420
296 2945918994 2945916053 Bacteria 4555517
297 2945920604 2945920336 Bacteria 4501603
298 2945943165 2945941187 Bacteria 4682474
299 2945959046 2945956166 Bacteria 5110334
300 2946039085 2946037020 Bacteria 4900426
301 2946062851 2946059875 Bacteria 4386623
302 2954000474 2953998280 Bacteria 4812144
303 2974306991 2974302888 Bacteria 4369871
304 8054111998 8054107350 Bacteria 5022511
305 8054283540 8054280661 Bacteria 4232245
306 8054358371 8054357960 Bacteria 2867777
307 8054476674 8054472261 Bacteria 7464355
308 8056065528 8056060235 Bacteria 7259403
309 Ga0395900_0008951
310 LJQas_1002628
311 JGI25152J39213_1000124
312 JGI25151J46595_10059556
313 Ga0055532_1000989
314 Ga0070670_100577523
315 Ga0070669_100047426
316 Ga0070671_100305945
317 Ga0070674_100152546
318 Ga0070667_100648380
319 Ga0070678_100003890
320 Ga0070672_100099748
321 Ga0068860_100007309
322 Ga0068860_101804775
323 Ga0075365_10052049
324 Ga0105251_10040058
325 Ga0105244_10016573
326 Ga0105244_10029689
327 Ga0105244_10043615
328 Ga0105243_10256064
329 Ga0105246_10027609
330 Ga0105246_10038010
331 Ga0105246_10117386
332 Ga0157370_10590746
333 Ga0157369_10282971
334 Ga0163162_10050972
335 Ga0163162_10316606
336 Ga0209147_100101
337 Ga0207425_1013088
338 Ga0209148_1001288
339 Ga0209129_1000067
340 Ga0209025_1000971
341 Ga0209051_1034020
342 Ga0209051_1052130
343 Ga0207655_1005022
344 Ga0207655_1023262
345 Ga0207645_10186765
346 Ga0207681_10051375
347 Ga0207650_10054917
348 Ga0207669_10349373
349 Ga0207691_10000138
350 Ga0207683_10012765
351 Ga0209371_1002410
352 Ga0268264_10005484
353 Ga0268256_1002236
354 Ga0307408_100026408
355 Ga0307408_100080220
356 Ga0307408_100104506
357 Ga0307408_100114927
358 Ga0307408_100174418
359 Ga0307408_100252898
360 Ga0307408_100370235
361 Ga0307408_100512144
362 Ga0307408_100796070
363 Ga0307405_10002265
364 Ga0307405_10015791
365 Ga0307405_10069769
366 Ga0307405_10105731
367 Ga0307405_10136931
368 Ga0307405_10246468
369 Ga0307413_10040180
370 Ga0307413_10054741
371 Ga0307413_10212221
372 Ga0307410_10003297
373 Ga0307410_10041458
374 Ga0307410_10125044
375 Ga0307410_10187653
376 Ga0307410_10235854
377 Ga0307410_10402194
378 Ga0307406_10057843
379 Ga0307406_10089320
380 Ga0307407_10072023
381 Ga0307407_10099789
382 Ga0307407_10158141
383 Ga0307407_10408361
384 Ga0307412_10020990
385 Ga0307412_10057369
386 Ga0307412_10062500
387 Ga0307412_10064898
388 Ga0307412_10126808
389 Ga0307412_10289665
390 Ga0307409_100080524
391 Ga0307409_100113337
392 Ga0307409_100172650
393 Ga0307409_100262316
394 Ga0307409_100264143
395 Ga0307409_101247713
396 Ga0307416_100048957
397 Ga0307416_100056291
398 Ga0307416_100117690
399 Ga0307416_100123678
400 Ga0307416_100133715
401 Ga0307416_100178843
402 Ga0307416_100400121
403 Ga0307416_100412775
404 Ga0307414_10075020
405 Ga0307411_10088844
406 Ga0307411_10107231
407 Ga0307415_100086492
408 Ga0307415_100180630
409 Ga0307415_100206246
410 Ga0307415_100656434
411 Ga0395899_0006430
412 Ga0395899_0090710
413 Ga0395900_0049538
414 Ga0395900_0095320
415 Ga0395900_0098728
416 Ga0395900_0203773
417 Ga0395900_0364217
418 Ga0395898_0014223
419 Ga0395898_0030878
420 Ga0395898_0034970
421 Ga0395898_0103123
422 Ga0395898_0447685
423 Ga0395905_0009094
424 Ga0395901_0038746
425 Ga0395901_0169339
426 Ga0395901_0264562
427 Ga0395901_0434608
428 Ga0395901_0467753
429 Ga0395901_0473461
430 Ga0439436_0024001
431 Ga0439436_0025819
432 Ga0439436_0031865
433 Ga0439436_0039545
434 Ga0439438_001589
435 Ga0439439_0006487
436 Ga0439461_0022266
437 Ga0439461_0027449
438 Ga0439466_0027045
439 Ga0439433_0000591
440 Ga0439433_0005972
441 Ga0439433_0017306
442 Ga0439442_010543
443 Ga0439432_000885
444 Ga0439449_0004293
445 Ga0439449_0005221
446 Ga0439449_0015504
447 Ga0439457_032606
448 Ga0439462_0000270
449 Ga0439462_0012895
450 Ga0450919_001035
451 Ga0450920_002017
452 Ga0450920_002244
453 Ga0450920_013382
454 Ga0450920_023409
455 Ga0450907_003660
456 Ga0439446_0003097
457 Ga0450908_001486
458 Ga0439434_0002026
459 Ga0439434_0002367
460 Ga0439434_0013437
461 Ga0450918_004225
462 Ga0450918_007690
463 Ga0466972_0022484
464 Ga0466965_0001223
465 Ga0466970_0107233
466 Ga0466957_0029842
467 Ga0466960_0045468
468 Ga0466958_0258418
469 Ga0495580_0001442
470 Ga0495580_0415223
471 Ga0495582_0317906
472 Ga0495639_0015858
473 Ga0495639_0193747
474 Ga0495662_0028632
475 Ga0495594_0054912
476 Ga0495631_0028338
477 Ga0495642_0017914
478 Ga0495642_0071635
479 Ga0495665_0001329
480 Ga0495665_0225145
481 Ga0495586_0003057
482 Ga0495586_0023127
483 Ga0495587_0000295
484 Ga0495645_0004137
485 Ga0495645_0216394
486 Ga0495622_0017955
487 Ga0495633_0024717
488 Ga0495667_0004212
489 Ga0495656_0021444
490 Ga0495668_0018009
491 Ga0495588_0003405
492 Ga0495588_0005125
493 Ga0495588_0009309
494 Ga0495588_0060619
495 Ga0495588_0190421
496 Ga0495657_0042411
497 Ga0495623_0142043
498 Ga0495670_0016447
499 Ga0495670_0256659
500 Ga0495671_0235417
501 Ga0495600_0040281
502 Ga0495600_0044655
503 Ga0495581_0009593
504 Ga0495581_0043370
505 Ga0495581_0066844
506 Ga0495604_0235960
507 Ga0495636_0006018
508 Ga0495680_0029053
509 Ga0495680_0143177
510 Ga0495675_0003818
511 Ga0495685_104938
512 Ga0495681_0027696
513 Ga0496100_0379299
514 Ga0496101_0035796
515 Ga0496101_0217610
516 Ga0496102_0178613
517 Ga0496102_0462652
518 Ga0496102_0564673
519 Ga0496102_0850793
520 Ga0496103_0348272
521 Ga0496106_0096247
522 Ga0496107_0071004
523 Ga0496107_0471422
524 Ga0496108_0239117
525 Ga0496108_0459136
526 Ga0496110_0036282
527 Ga0496110_0154648
528 Ga0496111_0186830
529 Ga0496112_0005227
530 Ga0496112_0035672
531 Ga0496112_0196908
532 Ga0496114_0754603
533 Ga0496115_0053633
534 Ga0496125_0035890
535 Ga0501031_0008726
536 Ga0501032_0011322
537 Ga0501032_0017527
538 Ga0501032_0386763
539 Ga0501034_0000016
540 Ga0501036_0027797
541 Ga0501037_0010170
542 Ga0501037_0309702
543 Ga0501038_0012225
544 Ga0501038_0115442
545 Ga0501038_0436202
546 Ga0501039_0021729
547 Ga0501039_0057801
548 Ga0501039_0097967
549 Ga0501040_0015044
550 Ga0501043_0060792
551 Ga0501048_0050636
552 Ga0501071_0035037
553 Ga0501072_0043993
554 Ga0501073_0221750
555 Ga0501074_0062957
556 Ga0501075_0152011
557 Ga0501076_0405244
558 Ga0501077_0049542
559 Ga0501035_0057098
560 Ga0501045_0015843
561 nmdc:mga00v17_7463_c1
562 nmdc:mga0yw44_23918_c1
563 Ga0495655_0009658
564 Ga0501084_0108493
565 2511176974
566 2512638152
567 2644230952
568 2691513794
569 2739204212
570 2745165991
571 2775658053
572 2791923199
573 2808831067
574 2808852329
575 2808891118
576 2812321241
577 2817509094
578 2817620782
579 2844852666
580 2852104257
581 2857465131
582 2857471284
583 2857597369
584 2857742181
585 2898910946
586 2899367721
587 2904498289
588 2904777649
589 2910811594
590 2915597798
591 2915610619
592 2919035020
593 2919051502
594 2919059843
595 2919395572
596 2919540477
597 2920882517
598 2928145109
599 2929189307
600 2932428333
601 2933422440
602 2939648737
603 2939675209
604 2945918994
605 2945920604
606 2945943165
607 2945959046
608 2946039085
609 2946062851
610 2954000474
611 2974306991
612 8054111998
613 8054283540
614 8054358371
615 8054476674
616 8056065528

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01205

UPF0029

Uncharacterized protein family UPF0029

41

153

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cjt-assembly7.cif.gz_M ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11 0.8412 148 181
3cjq-assembly3.cif.gz_G ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11 in space group p212121 0.8403 148 181
2nxe-assembly2.cif.gz_B t. thermophilus ribosomal protein l11 methyltransferase (prma) in complex with s-adenosyl-l-methionine 0.8347 148 181
2nxn-assembly1.cif.gz_A t. thermophilus ribosomal protein l11 methyltransferase (prma) in complex with ribosomal protein l11 0.8342 148 181
3cjr-assembly1.cif.gz_A ribosomal protein l11 methyltransferase (prma) in complex with ribosomal protein l11 (k39a) and inhibitor sinefungin. 0.8324 148 181
ID Description Score Start End Superfamily
af_Q6ZJC5_65_187_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9613 2 134 3.30.230.30
af_Q2G059_1_130_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9591 1 135 3.30.230.30
af_P27862_1_132_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9411 1 136 3.30.230.30
af_Q6ZJC5_65_187_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9309 2 134 3.30.230.30
af_Q2G059_1_130_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9304 1 135 3.30.230.30
ID Description Score Start End GO Terms
AF-A0A433H831-F1-model_v4 deleted 0.9717 1 133
AF-A0A7V4GVI3-F1-model_v4 YigZ family protein 0.966 1 119 GO:0005737
GO:0006446
AF-A0A7C6L6S6-F1-model_v4 YigZ family protein 0.9627 2 135 GO:0005737
GO:0006446
AF-A0A7C5DHU6-F1-model_v4 YigZ family protein 0.9574 2 134 GO:0005737
GO:0006446
AF-A0A2N5Z835-F1-model_v4 YigZ family protein 0.9557 2 134 GO:0005737
GO:0006446

Map