F399669

General Info

Members Datasets Scaffolds Average Seq Length
308 217 616 260

Family's Representative Sequence

Representative Sequence 3300010159|Ga0099796_10049143|Ga0099796_100491432
Length 292
Sequence MPANCRRFRRLPKPLASVPIITLGLLAWFGPARAYRPFDGTDAAVAAKGETEIELQPAGRLRDESGTSLIAPGTVINYGLSEDWEAVFEGQGQTPLSPPGPTSLTAAGAFLKHVLVPGSLQDKTGPSVATEFGVLLPDSTGNSGVGASLAGIVSQRWDWGTIHLNAETALTRDHHGDLFLGAIIEGPSKWTVRPVAEIFYENEFGKEQTFSGLVGLIYRVRDNLSFDVAIRHALTGGHPANEIRAGLTFGFPLAFFEGHAAQREASQICLDSLASPVVRIRPPITLTGPSCR

Samples

Sample ID Description Type Environment
1 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
43 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
44 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
90 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
91 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
92 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
93 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
95 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
98 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
99 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
101 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
102 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
103 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
104 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
105 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
117 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
118 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
121 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
122 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
127 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
128 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
129 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
132 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
133 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
134 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
140 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
141 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
142 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
149 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
150 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
151 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
155 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
163 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
164 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
165 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
166 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
167 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
168 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
169 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
170 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
171 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
172 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
173 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
174 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
175 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
176 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
177 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
178 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
179 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
180 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
181 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
182 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
183 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
184 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
185 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
186 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
187 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
188 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
189 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
190 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
191 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
192 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
193 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
194 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
195 2922425934
196 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
197 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
198 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
199 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
200 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
201 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
202 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
203 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
204 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
205 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
206 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
207 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
208 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
209 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
210 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
211 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
212 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
213 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
214 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
215 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
216 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
217 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.27
Metatranscriptomes 0
Isolates 11.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.79
Nodule 13.96
Rhizoplane 6.49
Rhizosphere 69.16
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099796_10049143 3300010159 Bacteria 1457
2 JGI25153J46596_10001982 3300003215 Bacteria 12131
3 JGI25404J52841_10002319 3300003659 Bacteria 3582
4 JGI25404J52841_10014779 3300003659 Unclassified 1694
5 Ga0055529_1007419 3300003763 Bacteria 1492
6 Ga0070683_100104442 3300005329 Bacteria 2670
7 Ga0070670_100052862 3300005331 Bacteria 3489
8 Ga0070660_100001075 3300005339 Bacteria 18360
9 Ga0070691_10043805 3300005341 Bacteria 2121
10 Ga0070675_100249762 3300005354 Unclassified 1552
11 Ga0070659_100184139 3300005366 Bacteria 1714
12 Ga0070709_10003588 3300005434 Bacteria 8334
13 Ga0070709_10026519 3300005434 Bacteria 3436
14 Ga0070714_100002993 3300005435 Bacteria 12523
15 Ga0070713_100029966 3300005436 Bacteria 4315
16 Ga0070713_100053961 3300005436 Bacteria 3332
17 Ga0070713_100062934 3300005436 Bacteria 3108
18 Ga0070713_100093453 3300005436 Bacteria 2591
19 Ga0070713_100316589 3300005436 Bacteria 1440
20 Ga0070710_10005648 3300005437 Bacteria 5956
21 Ga0070711_100002455 3300005439 Bacteria 10577
22 Ga0070711_100037284 3300005439 Bacteria 3262
23 Ga0070681_10029498 3300005458 Bacteria 5509
24 Ga0070681_10055633 3300005458 Bacteria 3939
25 Ga0070706_100013310 3300005467 Bacteria 7607
26 Ga0070707_100088817 3300005468 Bacteria 2990
27 Ga0070698_100028581 3300005471 Bacteria 5791
28 Ga0070679_100009982 3300005530 Bacteria 8988
29 Ga0070679_100045610 3300005530 Bacteria 4368
30 Ga0070679_100122480 3300005530 Bacteria 2584
31 Ga0070679_100486655 3300005530 Bacteria 1178
32 Ga0070684_100011685 3300005535 Bacteria 7001
33 Ga0070684_100142963 3300005535 Bacteria 2164
34 Ga0070697_100194332 3300005536 Unclassified 1723
35 Ga0070697_100338382 3300005536 Bacteria 1298
36 Ga0068853_100064734 3300005539 Bacteria 3171
37 Ga0068853_100173281 3300005539 Bacteria 1953
38 Ga0068853_100544745 3300005539 Bacteria 1099
39 Ga0070693_100222564 3300005547 Bacteria 1237
40 Ga0070665_100225388 3300005548 Bacteria 1875
41 Ga0068855_100163606 3300005563 Bacteria 2524
42 Ga0068855_100244399 3300005563 Bacteria 2004
43 Ga0068855_100256403 3300005563 Bacteria 1950
44 Ga0068857_100013150 3300005577 Bacteria 7213
45 Ga0068856_100089997 3300005614 Bacteria 3052
46 Ga0068856_100430230 3300005614 Bacteria 1340
47 Ga0068852_100097693 3300005616 Bacteria 2642
48 Ga0068864_100223786 3300005618 Bacteria 1737
49 Ga0068851_10015565 3300005834 Bacteria 3626
50 Ga0081455_10013359 3300005937 Bacteria 8122
51 Ga0081455_10156454 3300005937 Bacteria 1751
52 Ga0081540_1000293 3300005983 Bacteria 52532
53 Ga0081540_1008475 3300005983 Bacteria 7178
54 Ga0070717_10000805 3300006028 Bacteria 20616
55 Ga0070717_10058617 3300006028 Bacteria 3184
56 Ga0070716_100001694 3300006173 Bacteria 9945
57 Ga0070712_100010429 3300006175 Bacteria 5862
58 Ga0097621_100042077 3300006237 Bacteria 3679
59 Ga0075433_10076810 3300006852 Bacteria 2941
60 Ga0075434_100068536 3300006871 Bacteria 3534
61 Ga0075434_100077185 3300006871 Bacteria 3326
62 Ga0068865_100228898 3300006881 Bacteria 1457
63 Ga0075436_100359450 3300006914 Bacteria 1050
64 Ga0099824_1014350 3300006942 Bacteria 7895
65 Ga0099824_1030214 3300006942 Bacteria 2200
66 Ga0099822_1000400 3300006943 Bacteria 38677
67 Ga0099795_10003076 3300007788 Bacteria 4071
68 Ga0105240_10018930 3300009093 Bacteria 9221
69 Ga0105240_10070726 3300009093 Bacteria 4316
70 Ga0105240_10102975 3300009093 Bacteria 3469
71 Ga0105240_10283270 3300009093 Bacteria 1903
72 Ga0105240_10534597 3300009093 Bacteria 1299
73 Ga0111539_10174058 3300009094 Bacteria 2514
74 Ga0114129_10015432 3300009147 Bacteria 10866
75 Ga0105248_10001570 3300009177 Bacteria 25432
76 Ga0105237_10010653 3300009545 Bacteria 9769
77 Ga0105237_10028918 3300009545 Bacteria 5640
78 Ga0105237_10438802 3300009545 Bacteria 1311
79 Ga0105237_10609968 3300009545 Bacteria 1098
80 Ga0105238_10005612 3300009551 Bacteria 12402
81 Ga0105238_10160765 3300009551 Bacteria 2222
82 Ga0105238_10382982 3300009551 Bacteria 1398
83 Ga0105238_10534702 3300009551 Bacteria 1175
84 Ga0105249_10087989 3300009553 Bacteria 2900
85 Ga0099796_10003611 3300010159 Bacteria 3619
86 Ga0099796_10020255 3300010159 Unclassified 2030
87 Ga0105239_10012784 3300010375 Bacteria 9339
88 Ga0105239_10052385 3300010375 Bacteria 4476
89 Ga0157370_10233584 3300013104 Bacteria 1702
90 Ga0157370_10301226 3300013104 Bacteria 1480
91 Ga0157369_10000848 3300013105 Bacteria 39040
92 Ga0157369_10002340 3300013105 Bacteria 22809
93 Ga0157369_10158726 3300013105 Bacteria 2388
94 Ga0157374_10010827 3300013296 Bacteria 7869
95 Ga0163162_10035448 3300013306 Bacteria 4971
96 Ga0157372_10161415 3300013307 Bacteria 2590
97 Ga0157372_10263288 3300013307 Bacteria 2002
98 Ga0157372_10442958 3300013307 Bacteria 1514
99 Ga0163163_10083892 3300014325 Bacteria 3192
100 Ga0157379_10665398 3300014968 Unclassified 976
101 Ga0163161_10276284 3300017792 Archaea 1316
102 Ga0209677_110081 3300025253 Bacteria 1613
103 Ga0209455_1006152 3300025272 Bacteria 3594
104 Ga0209758_1000830 3300025297 Bacteria 43211
105 Ga0207692_10001087 3300025898 Bacteria 9955
106 Ga0207692_10034053 3300025898 Bacteria 2463
107 Ga0207647_10118577 3300025904 Bacteria 1561
108 Ga0207699_10007298 3300025906 Bacteria 5399
109 Ga0207684_10031599 3300025910 Bacteria 4503
110 Ga0207707_10000173 3300025912 Bacteria 67122
111 Ga0207707_10004159 3300025912 Bacteria 12822
112 Ga0207707_10111426 3300025912 Bacteria 2392
113 Ga0207707_10164792 3300025912 Bacteria 1937
114 Ga0207695_10210167 3300025913 Unclassified 1857
115 Ga0207693_10117509 3300025915 Bacteria 2088
116 Ga0207663_10004173 3300025916 Bacteria 7157
117 Ga0207660_10129493 3300025917 Bacteria 1919
118 Ga0207660_10337857 3300025917 Bacteria 1205
119 Ga0207657_10003784 3300025919 Bacteria 16083
120 Ga0207649_10478691 3300025920 Bacteria 944
121 Ga0207652_10154192 3300025921 Bacteria 2058
122 Ga0207650_10067186 3300025925 Bacteria 2690
123 Ga0207700_10027635 3300025928 Bacteria 3977
124 Ga0207700_10029703 3300025928 Bacteria 3861
125 Ga0207700_10140921 3300025928 Unclassified 1981
126 Ga0207700_10162649 3300025928 Bacteria 1855
127 Ga0207664_10012172 3300025929 Bacteria 6147
128 Ga0207644_10301349 3300025931 Archaea 1292
129 Ga0207686_10086799 3300025934 Unclassified 2056
130 Ga0207665_10004279 3300025939 Bacteria 9486
131 Ga0207661_10382921 3300025944 Unclassified 1273
132 Ga0207661_10640402 3300025944 Bacteria 977
133 Ga0207679_10191995 3300025945 Bacteria 1699
134 Ga0207667_10013785 3300025949 Bacteria 9237
135 Ga0207667_10350412 3300025949 Bacteria 1506
136 Ga0207639_10005857 3300026041 Bacteria 8325
137 Ga0207639_10306322 3300026041 Bacteria 1406
138 Ga0207702_10075379 3300026078 Bacteria 2914
139 Ga0207702_10361303 3300026078 Bacteria 1392
140 Ga0207674_10005754 3300026116 Bacteria 14710
141 Ga0207674_10434705 3300026116 Bacteria 1268
142 Ga0207698_10090287 3300026142 Bacteria 2505
143 Ga0207698_10150228 3300026142 Bacteria 2021
144 Ga0209389_1000086 3300027296 Bacteria 84925
145 Ga0209589_1000027 3300027357 Bacteria 155295
146 Ga0209589_1000030 3300027357 Bacteria 147457
147 Ga0209489_100056 3300027361 Bacteria 147457
148 Ga0209489_100313 3300027361 Bacteria 85507
149 Ga0209700_100059 3300027363 Bacteria 147457
150 Ga0209588_1031333 3300027671 Bacteria 1701
151 Ga0307508_10039462 3300031616 Bacteria 4241
152 Ga0307508_10097894 3300031616 Bacteria 2526
153 Ga0307507_10026652 3300033179 Bacteria 6220
154 Ga0307510_10038274 3300033180 Bacteria 5305
155 Ga0315911_1000017 3300033442 Bacteria 161609
156 Ga0373934_0034782 3300035086 Bacteria 1981
157 Ga0373923_0069542 3300035111 Bacteria 1509
158 Ga0373932_0111603 3300035112 Unclassified 902
159 Ga0373936_0005067 3300035113 Bacteria 4958
160 Ga0373936_0017871 3300035113 Bacteria 2734
161 Ga0373945_0008740 3300035116 Bacteria 3306
162 Ga0373960_0033363 3300035121 Bacteria 1451
163 Ga0373943_0019131 3300035170 Bacteria 3149
164 Ga0373924_0003203 3300035410 Bacteria 5596
165 Ga0373931_0041981 3300035691 Bacteria 2404
166 Ga0373931_0045636 3300035691 Bacteria 2315
167 Ga0373935_0074235 3300035692 Bacteria 2198
168 Ga0373927_0014559 3300035695 Bacteria 5204
169 Ga0373927_0130861 3300035695 Unclassified 1639
170 Ga0373947_0031417 3300035725 Bacteria 3125
171 Ga0373947_0035410 3300035725 Bacteria 2956
172 Ga0373947_0052881 3300035725 Bacteria 2447
173 Ga0373947_0110304 3300035725 Unclassified 1738
174 Ga0373937_0515222 3300036401 Bacteria 1136
175 Ga0373925_0033802 3300037068 Bacteria 3768
176 Ga0373925_0043917 3300037068 Bacteria 3318
177 Ga0373925_0150227 3300037068 Unclassified 1829
178 Ga0373925_0294907 3300037068 Viruses 1308
179 Ga0395900_0035118 3300037418 Bacteria 5164
180 Ga0395900_0281166 3300037418 Bacteria 1656
181 Ga0395898_0028265 3300037466 Bacteria 5623
182 Ga0395898_0059775 3300037466 Bacteria 3706
183 Ga0395898_0157760 3300037466 Bacteria 2170
184 Ga0395898_0212573 3300037466 Bacteria 1845
185 Ga0395901_0062276 3300038443 Bacteria 3883
186 Ga0395901_0089873 3300038443 Bacteria 3214
187 Ga0395901_0287134 3300038443 Bacteria 1708
188 Ga0395901_0377452 3300038443 Bacteria 1460
189 Ga0466959_0006493 3300045049 Bacteria 8105
190 Ga0466967_0070054 3300045976 Bacteria 3136
191 Ga0495603_0041716 3300046455 Bacteria 2744
192 Ga0495603_0078215 3300046455 Bacteria 1940
193 Ga0495603_0079905 3300046455 Bacteria 1917
194 Ga0495603_0103706 3300046455 Unclassified 1660
195 Ga0495641_0034303 3300046461 Bacteria 2400
196 Ga0495580_0016208 3300046472 Bacteria 5600
197 Ga0495580_0475223 3300046472 Bacteria 837
198 Ga0495582_0114765 3300046473 Unclassified 1514
199 Ga0495639_0176061 3300046475 Bacteria 1040
200 Ga0495664_0097409 3300046477 Bacteria 1770
201 Ga0495618_0306217 3300046514 Bacteria 986
202 Ga0495628_0258533 3300046516 Bacteria 1298
203 Ga0495630_0299246 3300046517 Bacteria 1229
204 Ga0495630_0606110 3300046517 Bacteria 839
205 Ga0495666_0128298 3300046526 Bacteria 1186
206 Ga0495665_0031458 3300046531 Bacteria 2840
207 Ga0495640_0006608 3300046533 Bacteria 9148
208 Ga0495622_0051161 3300046557 Bacteria 1916
209 Ga0495635_0168877 3300046663 Bacteria 1488
210 Ga0495599_0017285 3300046678 Bacteria 4484
211 Ga0495599_0378290 3300046678 Bacteria 846
212 Ga0495623_0120627 3300046679 Bacteria 1579
213 Ga0495646_0087091 3300046680 Bacteria 1810
214 Ga0495647_0012590 3300046681 Bacteria 2916
215 Ga0495658_0100476 3300046683 Bacteria 1726
216 Ga0495624_0033797 3300046690 Bacteria 3311
217 Ga0495581_0406911 3300047315 Unclassified 793
218 Ga0495674_0636715 3300047319 Bacteria 842
219 Ga0495676_0199033 3300047321 Bacteria 1393
220 Ga0495675_0149105 3300047444 Bacteria 1446
221 Ga0495684_0015335 3300047471 Bacteria 5898
222 Ga0495593_0022925 3300047673 Bacteria 3474
223 Ga0496100_0078741 3300048903 Bacteria 2219
224 Ga0496102_0020052 3300048905 Bacteria 5901
225 Ga0496102_0061182 3300048905 Bacteria 3445
226 Ga0496103_0176317 3300048906 Bacteria 1373
227 Ga0496104_0000669 3300048907 Bacteria 29403
228 Ga0496104_0025288 3300048907 Bacteria 5473
229 Ga0496104_0191997 3300048907 Unclassified 1954
230 Ga0496105_0001756 3300048908 Bacteria 15507
231 Ga0496107_0371056 3300048910 Unclassified 1064
232 Ga0496108_0000869 3300048911 Bacteria 23545
233 Ga0496109_0000537 3300048912 Bacteria 32125
234 Ga0496110_0005323 3300048913 Bacteria 10075
235 Ga0496110_0479954 3300048913 Bacteria 1132
236 Ga0496111_0029969 3300048914 Bacteria 3867
237 Ga0496111_0441244 3300048914 Unclassified 961
238 Ga0496112_0001765 3300048915 Bacteria 16964
239 Ga0496113_0000616 3300048916 Bacteria 17846
240 Ga0496114_0051118 3300048917 Bacteria 3441
241 Ga0496115_0364030 3300048918 Bacteria 1178
242 Ga0496121_0059588 3300048924 Bacteria 3146
243 nmdc:mga05p37_74287_c1 3300050507 Bacteria 4184
244 nmdc:mga06r32_51428_c1 3300050510 Bacteria 3943
245 nmdc:mga08y16_141789_c1 3300050511 Bacteria 2498
246 nmdc:mga0n895_144495_c1 3300050512 Bacteria 2408
247 nmdc:mga0n895_202346_c1 3300050512 Unclassified 2016
248 nmdc:mga08x19_297806_c1 3300050514 Bacteria 1120
249 nmdc:mga0a205_407127_c1 3300050515 Unclassified 1224
250 Ga0495612_0053987 3300053078 Bacteria 1655
251 Ga0495595_0305848 3300053084 Unclassified 800
252 Ga0495619_0385869 3300053085 Bacteria 968
253 Ga0500647_0050033 3300053091 Bacteria 2010
254 Ga0500566_0000026 3300053094 Bacteria 77138
255 Ga0500640_085182 3300053095 Bacteria 1333
256 Ga0500554_002489 3300053102 Bacteria 3634
257 Ga0500572_001975 3300053111 Bacteria 5131
258 Ga0500597_199070 3300053120 Bacteria 842
259 Ga0500614_000455 3300053123 Bacteria 10609
260 Ga0500559_0008759 3300053136 Bacteria 4413
261 Ga0500590_068820 3300053148 Bacteria 1763
262 Ga0500603_001067 3300053150 Bacteria 6438
263 Ga0500603_010902 3300053150 Bacteria 2059
264 Ga0500630_000530 3300053159 Bacteria 17155
265 Ga0500638_032156 3300053162 Bacteria 2533
266 Ga0500639_000673 3300053163 Bacteria 17246
267 Ga0500639_126506 3300053163 Bacteria 1218
268 Ga0500637_0045759 3300053178 Bacteria 2482
269 Ga0500637_0171677 3300053178 Bacteria 1246
270 Ga0500596_000502 3300053735 Bacteria 7363
271 Ga0500596_009789 3300053735 Bacteria 1488
272 2509149995 2508501128 Bacteria 8613869
273 2513652308 2513237095 Bacteria 8976980
274 2513657458 2513237096 Bacteria 8722461
275 2513894596 2513237141 Bacteria 8496279
276 2513894955 2513237141 Bacteria 8496279
277 2513916711 2513237145 Bacteria 8979722
278 2517888053 2517572143 Bacteria 9484767
279 2671119472 2667528175 Bacteria 7532676
280 2728754574 2728368998 Bacteria 8720350
281 2793073318 2791355197 Bacteria 8420563
282 2903770234 2903768456 Bacteria 9749579
283 2904696826 2904690495 Bacteria 9412302
284 2906666478 2906660503 Bacteria 8595048
285 2908761228 2908756301 Bacteria 8864324
286 2922428889
287 2935632799 2935630451 Bacteria 8169952
288 2935694122 2935684952 Bacteria 9590419
289 2935702381 2935694250 Bacteria 9291695
290 2935722067 2935713505 Bacteria 9608509
291 2935731288 2935722832 Bacteria 9608746
292 2935741407 2935732158 Bacteria 9706831
293 2935750813 2935741537 Bacteria 9707219
294 2935759619 2935750917 Bacteria 9590372
295 2935771645 2935769743 Bacteria 7878163
296 2935791003 2935785616 Bacteria 7962367
297 2935800087 2935793552 Bacteria 8012592
298 2940565524 2940556831 Bacteria 9590747
299 2941508537 2941507105 Bacteria 8166816
300 2941516367 2941515067 Bacteria 8166720
301 2941524617 2941523033 Bacteria 8169134
302 3005475800 3005474847 Bacteria 9259049
303 8016612057 8016603502 Bacteria 8731218
304 8016621752 8016613128 Bacteria 8794220
305 8016628094 8016622563 Bacteria 7999408
306 8019543562 8019538911 Bacteria 7872763
307 8019555207 8019547302 Bacteria 7996444
308 8019567239 8019565922 Bacteria 9639779
309 Ga0099796_10049143
310 JGI25153J46596_10001982
311 JGI25404J52841_10002319
312 JGI25404J52841_10014779
313 Ga0055529_1007419
314 Ga0070683_100104442
315 Ga0070670_100052862
316 Ga0070660_100001075
317 Ga0070691_10043805
318 Ga0070675_100249762
319 Ga0070659_100184139
320 Ga0070709_10003588
321 Ga0070709_10026519
322 Ga0070714_100002993
323 Ga0070713_100029966
324 Ga0070713_100053961
325 Ga0070713_100062934
326 Ga0070713_100093453
327 Ga0070713_100316589
328 Ga0070710_10005648
329 Ga0070711_100002455
330 Ga0070711_100037284
331 Ga0070681_10029498
332 Ga0070681_10055633
333 Ga0070706_100013310
334 Ga0070707_100088817
335 Ga0070698_100028581
336 Ga0070679_100009982
337 Ga0070679_100045610
338 Ga0070679_100122480
339 Ga0070679_100486655
340 Ga0070684_100011685
341 Ga0070684_100142963
342 Ga0070697_100194332
343 Ga0070697_100338382
344 Ga0068853_100064734
345 Ga0068853_100173281
346 Ga0068853_100544745
347 Ga0070693_100222564
348 Ga0070665_100225388
349 Ga0068855_100163606
350 Ga0068855_100244399
351 Ga0068855_100256403
352 Ga0068857_100013150
353 Ga0068856_100089997
354 Ga0068856_100430230
355 Ga0068852_100097693
356 Ga0068864_100223786
357 Ga0068851_10015565
358 Ga0081455_10013359
359 Ga0081455_10156454
360 Ga0081540_1000293
361 Ga0081540_1008475
362 Ga0070717_10000805
363 Ga0070717_10058617
364 Ga0070716_100001694
365 Ga0070712_100010429
366 Ga0097621_100042077
367 Ga0075433_10076810
368 Ga0075434_100068536
369 Ga0075434_100077185
370 Ga0068865_100228898
371 Ga0075436_100359450
372 Ga0099824_1014350
373 Ga0099824_1030214
374 Ga0099822_1000400
375 Ga0099795_10003076
376 Ga0105240_10018930
377 Ga0105240_10070726
378 Ga0105240_10102975
379 Ga0105240_10283270
380 Ga0105240_10534597
381 Ga0111539_10174058
382 Ga0114129_10015432
383 Ga0105248_10001570
384 Ga0105237_10010653
385 Ga0105237_10028918
386 Ga0105237_10438802
387 Ga0105237_10609968
388 Ga0105238_10005612
389 Ga0105238_10160765
390 Ga0105238_10382982
391 Ga0105238_10534702
392 Ga0105249_10087989
393 Ga0099796_10003611
394 Ga0099796_10020255
395 Ga0105239_10012784
396 Ga0105239_10052385
397 Ga0157370_10233584
398 Ga0157370_10301226
399 Ga0157369_10000848
400 Ga0157369_10002340
401 Ga0157369_10158726
402 Ga0157374_10010827
403 Ga0163162_10035448
404 Ga0157372_10161415
405 Ga0157372_10263288
406 Ga0157372_10442958
407 Ga0163163_10083892
408 Ga0157379_10665398
409 Ga0163161_10276284
410 Ga0209677_110081
411 Ga0209455_1006152
412 Ga0209758_1000830
413 Ga0207692_10001087
414 Ga0207692_10034053
415 Ga0207647_10118577
416 Ga0207699_10007298
417 Ga0207684_10031599
418 Ga0207707_10000173
419 Ga0207707_10004159
420 Ga0207707_10111426
421 Ga0207707_10164792
422 Ga0207695_10210167
423 Ga0207693_10117509
424 Ga0207663_10004173
425 Ga0207660_10129493
426 Ga0207660_10337857
427 Ga0207657_10003784
428 Ga0207649_10478691
429 Ga0207652_10154192
430 Ga0207650_10067186
431 Ga0207700_10027635
432 Ga0207700_10029703
433 Ga0207700_10140921
434 Ga0207700_10162649
435 Ga0207664_10012172
436 Ga0207644_10301349
437 Ga0207686_10086799
438 Ga0207665_10004279
439 Ga0207661_10382921
440 Ga0207661_10640402
441 Ga0207679_10191995
442 Ga0207667_10013785
443 Ga0207667_10350412
444 Ga0207639_10005857
445 Ga0207639_10306322
446 Ga0207702_10075379
447 Ga0207702_10361303
448 Ga0207674_10005754
449 Ga0207674_10434705
450 Ga0207698_10090287
451 Ga0207698_10150228
452 Ga0209389_1000086
453 Ga0209589_1000027
454 Ga0209589_1000030
455 Ga0209489_100056
456 Ga0209489_100313
457 Ga0209700_100059
458 Ga0209588_1031333
459 Ga0307508_10039462
460 Ga0307508_10097894
461 Ga0307507_10026652
462 Ga0307510_10038274
463 Ga0315911_1000017
464 Ga0373934_0034782
465 Ga0373923_0069542
466 Ga0373932_0111603
467 Ga0373936_0005067
468 Ga0373936_0017871
469 Ga0373945_0008740
470 Ga0373960_0033363
471 Ga0373943_0019131
472 Ga0373924_0003203
473 Ga0373931_0041981
474 Ga0373931_0045636
475 Ga0373935_0074235
476 Ga0373927_0014559
477 Ga0373927_0130861
478 Ga0373947_0031417
479 Ga0373947_0035410
480 Ga0373947_0052881
481 Ga0373947_0110304
482 Ga0373937_0515222
483 Ga0373925_0033802
484 Ga0373925_0043917
485 Ga0373925_0150227
486 Ga0373925_0294907
487 Ga0395900_0035118
488 Ga0395900_0281166
489 Ga0395898_0028265
490 Ga0395898_0059775
491 Ga0395898_0157760
492 Ga0395898_0212573
493 Ga0395901_0062276
494 Ga0395901_0089873
495 Ga0395901_0287134
496 Ga0395901_0377452
497 Ga0466959_0006493
498 Ga0466967_0070054
499 Ga0495603_0041716
500 Ga0495603_0078215
501 Ga0495603_0079905
502 Ga0495603_0103706
503 Ga0495641_0034303
504 Ga0495580_0016208
505 Ga0495580_0475223
506 Ga0495582_0114765
507 Ga0495639_0176061
508 Ga0495664_0097409
509 Ga0495618_0306217
510 Ga0495628_0258533
511 Ga0495630_0299246
512 Ga0495630_0606110
513 Ga0495666_0128298
514 Ga0495665_0031458
515 Ga0495640_0006608
516 Ga0495622_0051161
517 Ga0495635_0168877
518 Ga0495599_0017285
519 Ga0495599_0378290
520 Ga0495623_0120627
521 Ga0495646_0087091
522 Ga0495647_0012590
523 Ga0495658_0100476
524 Ga0495624_0033797
525 Ga0495581_0406911
526 Ga0495674_0636715
527 Ga0495676_0199033
528 Ga0495675_0149105
529 Ga0495684_0015335
530 Ga0495593_0022925
531 Ga0496100_0078741
532 Ga0496102_0020052
533 Ga0496102_0061182
534 Ga0496103_0176317
535 Ga0496104_0000669
536 Ga0496104_0025288
537 Ga0496104_0191997
538 Ga0496105_0001756
539 Ga0496107_0371056
540 Ga0496108_0000869
541 Ga0496109_0000537
542 Ga0496110_0005323
543 Ga0496110_0479954
544 Ga0496111_0029969
545 Ga0496111_0441244
546 Ga0496112_0001765
547 Ga0496113_0000616
548 Ga0496114_0051118
549 Ga0496115_0364030
550 Ga0496121_0059588
551 nmdc:mga05p37_74287_c1
552 nmdc:mga06r32_51428_c1
553 nmdc:mga08y16_141789_c1
554 nmdc:mga0n895_144495_c1
555 nmdc:mga0n895_202346_c1
556 nmdc:mga08x19_297806_c1
557 nmdc:mga0a205_407127_c1
558 Ga0495612_0053987
559 Ga0495595_0305848
560 Ga0495619_0385869
561 Ga0500647_0050033
562 Ga0500566_0000026
563 Ga0500640_085182
564 Ga0500554_002489
565 Ga0500572_001975
566 Ga0500597_199070
567 Ga0500614_000455
568 Ga0500559_0008759
569 Ga0500590_068820
570 Ga0500603_001067
571 Ga0500603_010902
572 Ga0500630_000530
573 Ga0500638_032156
574 Ga0500639_000673
575 Ga0500639_126506
576 Ga0500637_0045759
577 Ga0500637_0171677
578 Ga0500596_000502
579 Ga0500596_009789
580 2509149995
581 2513652308
582 2513657458
583 2513894596
584 2513894955
585 2513916711
586 2517888053
587 2671119472
588 2728754574
589 2793073318
590 2903770234
591 2904696826
592 2906666478
593 2908761228
594 2922428889
595 2935632799
596 2935694122
597 2935702381
598 2935722067
599 2935731288
600 2935741407
601 2935750813
602 2935759619
603 2935771645
604 2935791003
605 2935800087
606 2940565524
607 2941508537
608 2941516367
609 2941524617
610 3005475800
611 8016612057
612 8016621752
613 8016628094
614 8019543562
615 8019555207
616 8019567239

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fpn-assembly1.cif.gz_A-2 the crystal structure of the ywmb protein from bacillus subtilis 0.7268 192 230
5o68-assembly2.cif.gz_D crystal structure of the pseudomonas functional amyloid secretion protein fapf - r157a mutant 0.6619 43 232
5o68-assembly1.cif.gz_C crystal structure of the pseudomonas functional amyloid secretion protein fapf - r157a mutant 0.6272 39 233
5mtw-assembly1.cif.gz_D mycobacterium tuberculosis rv1957 secb-like chaperone in complex with a chad peptide from rv1956 higa1 antitoxin 0.6238 185 230
5o68-assembly3.cif.gz_G crystal structure of the pseudomonas functional amyloid secretion protein fapf - r157a mutant 0.6146 43 230
ID Description Score Start End Superfamily
af_P36943_113_295_2.40.160.160 Mainly Beta;Beta Barrel;Porin;Inverse autotransporter, beta-domain 0.7524 129 219 2.40.160.160
af_I1JUG7_1_167_3.10.450.50 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.6428 198 230 3.10.450.50
2c2iB00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.6414 188 230 3.10.129.10
af_Q9VRD6_2_130_3.10.450.50 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.6225 127 169 3.10.450.50
4meeA00 Mainly Beta;Beta Barrel;Lipocalin;Autotransporter beta-domain 0.5821 43 232 2.40.128.130
ID Description Score Start End GO Terms
AF-A0A536XEU4-F1-model_v4 ShlB/FhaC/HecB family hemolysin secretion/activation protein 0.8569 30 233
AF-B9TGQ1-F1-model_v4 Transporter 0.8343 129 230
AF-A0A7I9VL52-F1-model_v4 ANTAR domain-containing protein 0.8252 160 241
AF-A0A534PCT5-F1-model_v4 Uncharacterized protein 0.8208 122 243
AF-A0A1M7U863-F1-model_v4 MetA-pathway of phenol degradation 0.82 23 242

Map