F399318

General Info

Members Datasets Scaffolds Average Seq Length
307 198 614 164

Family's Representative Sequence

Representative Sequence 3300044901|Ga0466960_0037170|Ga0466960_0037170_1379_1948
Length 189
Sequence LSPDAVRRSKEERSRRLDGCAGYAPLVVERRWPDEVERVAAFLRESGVESRVEEFRQGTPTAEDAARAAGCELAQIVKSLVFDCDGRSIVVLVPGDRRADRQAVGAAAGCGKAKIAGPDQVLAATGFAPGAVAPFPLPNVDRVYVDRSLLQHRIVWVGAGSSRHMASLAPTDLVRLAQAEPMDAVERHT

Samples

Sample ID Description Type Environment
1 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
69 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
70 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
71 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
72 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
83 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
84 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
85 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
86 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
87 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
88 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
89 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
90 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
91 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
92 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
93 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
94 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
95 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
96 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
97 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
105 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
106 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
107 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
108 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
109 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
110 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
113 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
114 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
115 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
116 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
117 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
120 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
125 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
129 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
130 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
131 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
132 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
133 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
134 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
135 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
136 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
140 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
141 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
142 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
143 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
144 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
145 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
150 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
151 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
152 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
153 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
173 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
174 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
175 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
176 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
177 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
178 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
179 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
180 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
181 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
182 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
183 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
184 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
185 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
188 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
189 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
190 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
191 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
192 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
193 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
194 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
195 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
196 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
197 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
198 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.14
Rhizosphere 89.25
Stem 0
Stem Tuber 0
Unclassified 4.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466960_0037170 3300044901 Bacteria 2283
2 Ga0070683_100350940 3300005329 Bacteria 1405
3 Ga0070682_100239875 3300005337 Bacteria 1301
4 Ga0070660_100004505 3300005339 Bacteria 9629
5 Ga0070675_100078982 3300005354 Bacteria 2741
6 Ga0070671_100241688 3300005355 Bacteria 1533
7 Ga0070674_100067832 3300005356 Bacteria 2510
8 Ga0070659_100708282 3300005366 Bacteria 871
9 Ga0070659_101292972 3300005366 Bacteria 647
10 Ga0070701_10227223 3300005438 Bacteria 1116
11 Ga0070700_100719384 3300005441 Bacteria 796
12 Ga0070678_100115188 3300005456 Bacteria 2110
13 Ga0070662_100625882 3300005457 Bacteria 907
14 Ga0070681_10098209 3300005458 Bacteria 2875
15 Ga0068867_100119591 3300005459 Bacteria 2034
16 Ga0070698_100056810 3300005471 Bacteria 3963
17 Ga0070684_101225324 3300005535 Unclassified 706
18 Ga0070697_100129443 3300005536 Bacteria 2116
19 Ga0070686_100226852 3300005544 Bacteria 1353
20 Ga0070696_100157932 3300005546 Bacteria 1669
21 Ga0068856_101147357 3300005614 Bacteria 794
22 Ga0068861_100401659 3300005719 Bacteria 1216
23 Ga0068861_100460028 3300005719 Bacteria 1142
24 Ga0081455_10013758 3300005937 Bacteria 7965
25 Ga0081538_10031057 3300005981 Bacteria 3612
26 Ga0081540_1005959 3300005983 Bacteria 8987
27 Ga0081540_1028305 3300005983 Bacteria 3151
28 Ga0070712_100128531 3300006175 Bacteria 1917
29 Ga0097621_100224573 3300006237 Bacteria 1638
30 Ga0075428_100728343 3300006844 Unclassified 1056
31 Ga0075431_100186265 3300006847 Bacteria 2128
32 Ga0075433_10637099 3300006852 Bacteria 935
33 Ga0075434_100652385 3300006871 Bacteria 1071
34 Ga0075434_101421029 3300006871 Bacteria 704
35 Ga0075436_100270359 3300006914 Bacteria 1214
36 Ga0075436_100431556 3300006914 Bacteria 958
37 Ga0111539_10833942 3300009094 Bacteria 1073
38 Ga0105245_10136024 3300009098 Bacteria 2309
39 Ga0105245_10170939 3300009098 Bacteria 2070
40 Ga0105245_10700677 3300009098 Bacteria 1046
41 Ga0105247_10390031 3300009101 Bacteria 989
42 Ga0114129_10072326 3300009147 Bacteria 4807
43 Ga0114129_10597325 3300009147 Bacteria 1430
44 Ga0105241_10751833 3300009174 Unclassified 894
45 Ga0105242_10109357 3300009176 Bacteria 2354
46 Ga0105248_10600670 3300009177 Bacteria 1242
47 Ga0105248_11965402 3300009177 Unclassified 664
48 Ga0105249_10362091 3300009553 Bacteria 1472
49 Ga0105249_10739056 3300009553 Bacteria 1046
50 Ga0105239_10274164 3300010375 Bacteria 1898
51 Ga0157374_10219303 3300013296 Bacteria 1866
52 Ga0157378_10237630 3300013297 Bacteria 1739
53 Ga0163162_11398129 3300013306 Bacteria 796
54 Ga0157375_10013629 3300013308 Bacteria 7246
55 Ga0157379_10329359 3300014968 Bacteria 1395
56 Ga0157376_10194737 3300014969 Bacteria 1861
57 Ga0207654_10168003 3300025911 Bacteria 1422
58 Ga0207707_10978491 3300025912 Unclassified 695
59 Ga0207693_10097318 3300025915 Bacteria 2307
60 Ga0207657_10018162 3300025919 Bacteria 6728
61 Ga0207687_10149036 3300025927 Bacteria 1783
62 Ga0207687_10291471 3300025927 Bacteria 1312
63 Ga0207690_10535683 3300025932 Bacteria 950
64 Ga0207686_10344630 3300025934 Bacteria 1120
65 Ga0207709_10350704 3300025935 Bacteria 1114
66 Ga0207669_10097715 3300025937 Bacteria 1932
67 Ga0207711_10084182 3300025941 Bacteria 2784
68 Ga0207661_10262887 3300025944 Bacteria 1538
69 Ga0207661_10473075 3300025944 Bacteria 1143
70 Ga0207712_11496978 3300025961 Bacteria 604
71 Ga0207677_10360756 3300026023 Bacteria 1221
72 Ga0207708_10707098 3300026075 Bacteria 862
73 Ga0207648_10137097 3300026089 Bacteria 2156
74 Ga0207675_100373984 3300026118 Bacteria 1400
75 Ga0207675_100533684 3300026118 Bacteria 1171
76 Ga0207683_10059248 3300026121 Bacteria 3364
77 Ga0207428_10377950 3300027907 Bacteria 1040
78 Ga0207428_10402291 3300027907 Bacteria 1002
79 Ga0307406_10044873 3300031901 Bacteria 2772
80 Ga0307406_10202645 3300031901 Bacteria 1462
81 Ga0307409_100279113 3300031995 Bacteria 1543
82 Ga0307409_100346009 3300031995 Bacteria 1401
83 Ga0307416_100058645 3300032002 Bacteria 3123
84 Ga0307416_100250383 3300032002 Bacteria 1724
85 Ga0307415_100247696 3300032126 Bacteria 1446
86 Ga0307415_100275194 3300032126 Bacteria 1381
87 Ga0373939_0194846 3300035114 Bacteria 763
88 Ga0373941_0082168 3300035115 Bacteria 1090
89 Ga0373945_0088261 3300035116 Bacteria 1197
90 Ga0373943_0035705 3300035170 Bacteria 2377
91 Ga0373931_0634351 3300035691 Bacteria 701
92 Ga0373935_0018597 3300035692 Bacteria 4230
93 Ga0373927_0206385 3300035695 Bacteria 1290
94 Ga0373947_0003525 3300035725 Bacteria 9245
95 Ga0373925_0004301 3300037068 Bacteria 10786
96 Ga0373925_0970229 3300037068 Bacteria 700
97 Ga0395900_0010317 3300037418 Bacteria 9557
98 Ga0395900_0323727 3300037418 Bacteria 1521
99 Ga0395898_0010547 3300037466 Bacteria 9649
100 Ga0395898_0511530 3300037466 Bacteria 1142
101 Ga0395905_0003930 3300037471 Bacteria 15641
102 Ga0395905_0836038 3300037471 Bacteria 824
103 Ga0395901_0028999 3300038443 Bacteria 5693
104 Ga0395901_0129689 3300038443 Archaea 2649
105 Ga0395901_0201991 3300038443 Bacteria 2083
106 Ga0439461_0030275 3300041410 Unclassified 1124
107 Ga0451800_0391591 3300041459 Bacteria 2694
108 Ga0451839_0708213 3300041496 Bacteria 1638
109 Ga0451841_0513170 3300041498 Bacteria 1131
110 Ga0451849_0496642 3300041505 Bacteria 3010
111 Ga0451851_0632787 3300041507 Bacteria 746
112 Ga0451843_0485133 3300041509 Bacteria 990
113 Ga0451853_0751310 3300041512 Bacteria 918
114 Ga0451853_1564462 3300041512 Bacteria 3064
115 Ga0451853_1831857 3300041512 Bacteria 1940
116 Ga0439437_002273 3300042000 Bacteria 2049
117 Ga0450920_023819 3300042122 Archaea 1187
118 Ga0450907_013993 3300042146 Archaea 1338
119 Ga0439434_0023844 3300042435 Bacteria 1843
120 Ga0439435_0034251 3300042436 Bacteria 1395
121 Ga0450918_006509 3300042531 Bacteria 2080
122 Ga0466972_0114551 3300044658 Unclassified 1273
123 Ga0466968_0059341 3300044735 Bacteria 1648
124 Ga0466960_0034355 3300044901 Bacteria 2363
125 Ga0466959_1218051 3300045049 Bacteria 500
126 Ga0451576_1350947 3300045051 Bacteria 742
127 Ga0466967_0171842 3300045976 Bacteria 2040
128 Ga0466967_1160394 3300045976 Bacteria 770
129 Ga0495629_0047048 3300046459 Bacteria 3025
130 Ga0495629_0110243 3300046459 Bacteria 1919
131 Ga0495641_0000382 3300046461 Bacteria 36946
132 Ga0495641_0310779 3300046461 Bacteria 711
133 Ga0495651_0277344 3300046462 Bacteria 1134
134 Ga0495653_0072135 3300046463 Bacteria 2579
135 Ga0495653_0145914 3300046463 Bacteria 1658
136 Ga0495582_0000645 3300046473 Bacteria 19186
137 Ga0495582_0103949 3300046473 Bacteria 1592
138 Ga0495582_0407324 3300046473 Unclassified 784
139 Ga0495639_0019499 3300046475 Bacteria 2961
140 Ga0495662_0007686 3300046476 Bacteria 5313
141 Ga0495585_0435948 3300046492 Bacteria 628
142 Ga0495594_0119189 3300046499 Unclassified 1491
143 Ga0495607_0277217 3300046501 Bacteria 797
144 Ga0495608_0010713 3300046511 Bacteria 6396
145 Ga0495608_0130830 3300046511 Bacteria 1606
146 Ga0495618_0267828 3300046514 Bacteria 1068
147 Ga0495628_0316059 3300046516 Bacteria 1153
148 Ga0495630_0026780 3300046517 Bacteria 4271
149 Ga0495630_0073893 3300046517 Bacteria 2567
150 Ga0495631_0186365 3300046518 Bacteria 889
151 Ga0495644_0114259 3300046523 Bacteria 1025
152 Ga0495663_0028993 3300046525 Bacteria 1632
153 Ga0495652_0124308 3300046529 Bacteria 2052
154 Ga0495665_0001193 3300046531 Bacteria 13840
155 Ga0495640_0052611 3300046533 Bacteria 2795
156 Ga0495640_0514695 3300046533 Unclassified 727
157 Ga0495586_0011410 3300046535 Bacteria 4727
158 Ga0495587_0170894 3300046536 Bacteria 1235
159 Ga0495645_0124197 3300046543 Bacteria 1815
160 Ga0495667_0042124 3300046559 Bacteria 3027
161 Ga0495667_0358655 3300046559 Bacteria 920
162 Ga0495656_0134794 3300046615 Bacteria 1178
163 Ga0495634_0158450 3300046642 Bacteria 1428
164 Ga0495635_0038056 3300046663 Bacteria 3330
165 Ga0495635_0058984 3300046663 Bacteria 2639
166 Ga0495635_0709219 3300046663 Bacteria 652
167 Ga0495588_0258732 3300046674 Unclassified 917
168 Ga0495657_0483041 3300046675 Bacteria 723
169 Ga0495599_0076916 3300046678 Bacteria 2084
170 Ga0495646_0172507 3300046680 Bacteria 1191
171 Ga0495647_0004853 3300046681 Bacteria 4394
172 Ga0495658_0002310 3300046683 Bacteria 9625
173 Ga0495658_0141749 3300046683 Bacteria 1470
174 Ga0495613_0003260 3300046689 Bacteria 12136
175 Ga0495613_0266839 3300046689 Bacteria 1191
176 Ga0495624_0011732 3300046690 Bacteria 6017
177 Ga0495624_0226239 3300046690 Bacteria 1134
178 Ga0495600_0113019 3300046809 Bacteria 1768
179 Ga0495581_0021369 3300047315 Bacteria 3752
180 Ga0495674_0016873 3300047319 Bacteria 6811
181 Ga0495674_0087767 3300047319 Bacteria 2661
182 Ga0495676_0006363 3300047321 Bacteria 10878
183 Ga0495676_0247326 3300047321 Bacteria 1218
184 Ga0495680_0032541 3300047322 Bacteria 4231
185 Ga0495680_0138998 3300047322 Bacteria 1778
186 Ga0495673_0177056 3300047469 Bacteria 810
187 Ga0495684_0010187 3300047471 Bacteria 7271
188 Ga0495684_0067382 3300047471 Bacteria 2722
189 Ga0495593_0006704 3300047673 Bacteria 6743
190 Ga0495614_0073026 3300048089 Bacteria 1481
191 Ga0495614_0130366 3300048089 Bacteria 1112
192 Ga0496101_0039005 3300048904 Bacteria 3375
193 Ga0496101_0347192 3300048904 Bacteria 1166
194 Ga0496102_0061985 3300048905 Bacteria 3424
195 Ga0496104_0003326 3300048907 Bacteria 13881
196 Ga0496104_0171388 3300048907 Bacteria 2081
197 Ga0496105_0009203 3300048908 Bacteria 7710
198 Ga0496105_0286896 3300048908 Bacteria 1326
199 Ga0496106_0663439 3300048909 Bacteria 833
200 Ga0496107_0501476 3300048910 Unclassified 900
201 Ga0496108_0123395 3300048911 Bacteria 2223
202 Ga0496108_0240699 3300048911 Bacteria 1574
203 Ga0496109_0056275 3300048912 Bacteria 3589
204 Ga0496109_0558059 3300048912 Bacteria 1080
205 Ga0496110_0086215 3300048913 Bacteria 2803
206 Ga0496111_0071671 3300048914 Bacteria 2522
207 Ga0496111_0171755 3300048914 Bacteria 1611
208 Ga0496112_0001530 3300048915 Bacteria 17832
209 Ga0496113_0127118 3300048916 Bacteria 1997
210 Ga0496114_0033124 3300048917 Bacteria 4256
211 Ga0496114_0080490 3300048917 Bacteria 2751
212 Ga0496114_0292614 3300048917 Bacteria 1437
213 Ga0496114_1184168 3300048917 Bacteria 650
214 Ga0496115_0001957 3300048918 Bacteria 14699
215 Ga0496115_0483358 3300048918 Bacteria 997
216 Ga0501031_0004099 3300049568 Bacteria 9412
217 Ga0501031_0021614 3300049568 Bacteria 4195
218 Ga0501032_0035979 3300049569 Bacteria 3382
219 Ga0501033_0051468 3300049570 Bacteria 3053
220 Ga0501036_0001027 3300049572 Bacteria 21086
221 Ga0501036_0038811 3300049572 Bacteria 4031
222 Ga0501036_0484963 3300049572 Bacteria 1029
223 Ga0501037_0012964 3300049573 Bacteria 6145
224 Ga0501037_0032041 3300049573 Bacteria 3881
225 Ga0501038_0011389 3300049574 Bacteria 8116
226 Ga0501038_0070059 3300049574 Bacteria 2978
227 Ga0501038_0153325 3300049574 Bacteria 1877
228 Ga0501039_0017673 3300049575 Bacteria 5470
229 Ga0501039_0134433 3300049575 Bacteria 1941
230 Ga0501040_0004872 3300049576 Bacteria 8687
231 Ga0501041_0027037 3300049577 Bacteria 3455
232 Ga0501041_0072234 3300049577 Bacteria 2119
233 Ga0501041_0551336 3300049577 Bacteria 735
234 Ga0501042_0000334 3300049578 Bacteria 23630
235 Ga0501042_0026797 3300049578 Bacteria 4049
236 Ga0501043_0428953 3300049579 Bacteria 996
237 Ga0501046_0022389 3300049580 Bacteria 5205
238 Ga0501046_0141483 3300049580 Bacteria 1820
239 Ga0501048_0002894 3300049582 Bacteria 13102
240 Ga0501048_0003753 3300049582 Bacteria 11591
241 Ga0501048_0657716 3300049582 Bacteria 752
242 Ga0501048_0958748 3300049582 Bacteria 615
243 Ga0501067_0008835 3300049583 Bacteria 5581
244 Ga0501067_0121011 3300049583 Bacteria 1456
245 Ga0501068_0007854 3300049584 Bacteria 5912
246 Ga0501068_0052485 3300049584 Bacteria 2467
247 Ga0501068_0545172 3300049584 Bacteria 754
248 Ga0501069_0010165 3300049585 Bacteria 4977
249 Ga0501069_0088547 3300049585 Bacteria 1750
250 Ga0501071_0000345 3300049587 Bacteria 22601
251 Ga0501071_0000651 3300049587 Bacteria 18127
252 Ga0501071_0485818 3300049587 Bacteria 947
253 Ga0501071_0924651 3300049587 Unclassified 673
254 Ga0501072_0131654 3300049588 Bacteria 1993
255 Ga0501073_0273351 3300049589 Bacteria 1166
256 Ga0501074_0000765 3300049590 Bacteria 20232
257 Ga0501074_0043447 3300049590 Bacteria 3253
258 Ga0501075_0038185 3300049591 Bacteria 3589
259 Ga0501075_0269882 3300049591 Bacteria 1296
260 Ga0501075_0534134 3300049591 Bacteria 895
261 Ga0501076_0001235 3300049592 Bacteria 17016
262 Ga0501076_0027563 3300049592 Bacteria 4405
263 Ga0501076_0268656 3300049592 Bacteria 1397
264 Ga0501077_0003278 3300049593 Bacteria 9747
265 Ga0501077_0043829 3300049593 Bacteria 2843
266 Ga0501077_0673808 3300049593 Bacteria 664
267 Ga0501077_0763272 3300049593 Bacteria 622
268 Ga0501079_0001742 3300049741 Bacteria 15514
269 Ga0501079_0047722 3300049741 Bacteria 3304
270 Ga0501079_0064690 3300049741 Bacteria 2821
271 Ga0501080_0021050 3300049742 Bacteria 6037
272 Ga0501080_0200552 3300049742 Bacteria 1832
273 Ga0501080_0250621 3300049742 Bacteria 1614
274 Ga0501080_0680610 3300049742 Bacteria 908
275 Ga0501081_0048004 3300049743 Bacteria 2937
276 Ga0501081_0066525 3300049743 Bacteria 2506
277 Ga0501083_0260799 3300049744 Bacteria 1127
278 Ga0501035_0055540 3300049822 Bacteria 3535
279 Ga0501035_0057550 3300049822 Bacteria 3466
280 Ga0501035_0223062 3300049822 Bacteria 1609
281 Ga0501035_0389989 3300049822 Unclassified 1160
282 Ga0501045_0000466 3300049824 Bacteria 25136
283 Ga0501045_0021227 3300049824 Bacteria 4643
284 Ga0501045_0247354 3300049824 Bacteria 1327
285 nmdc:mga05p37_24832_c1 3300050507 Bacteria 7286
286 nmdc:mga05p37_480957_c1 3300050507 Bacteria 1430
287 nmdc:mga08y16_203399_c1 3300050511 Bacteria 2052
288 nmdc:mga0n895_240986_c1 3300050512 Bacteria 1835
289 nmdc:mga0n895_729315_c1 3300050512 Unclassified 985
290 nmdc:mga08x19_115375_c1 3300050514 Bacteria 1795
291 nmdc:mga08x19_631942_c1 3300050514 Bacteria 759
292 nmdc:mga08x19_825160_c1 3300050514 Bacteria 659
293 nmdc:mga0a205_479347_c1 3300050515 Bacteria 1102
294 Ga0495601_0032453 3300053077 Bacteria 3251
295 Ga0495601_0373044 3300053077 Bacteria 926
296 Ga0495595_0006996 3300053084 Bacteria 4607
297 Ga0495619_0003157 3300053085 Bacteria 10690
298 Ga0495619_0004926 3300053085 Bacteria 8477
299 Ga0501084_0001413 3300054114 Bacteria 19014
300 Ga0501084_0054611 3300054114 Bacteria 3341
301 Ga0501082_0004874 3300060353 Bacteria 11709
302 Ga0501082_0041542 3300060353 Bacteria 3965
303 Ga0530510_0001475 3300061734 Bacteria 15786
304 Ga0530510_0011907 3300061734 Bacteria 6104
305 Ga0530510_0017990 3300061734 Bacteria 5010
306 Ga0530510_0077133 3300061734 Bacteria 2422
307 Ga0530510_0096836 3300061734 Bacteria 2157
308 Ga0466960_0037170
309 Ga0070683_100350940
310 Ga0070682_100239875
311 Ga0070660_100004505
312 Ga0070675_100078982
313 Ga0070671_100241688
314 Ga0070674_100067832
315 Ga0070659_100708282
316 Ga0070659_101292972
317 Ga0070701_10227223
318 Ga0070700_100719384
319 Ga0070678_100115188
320 Ga0070662_100625882
321 Ga0070681_10098209
322 Ga0068867_100119591
323 Ga0070698_100056810
324 Ga0070684_101225324
325 Ga0070697_100129443
326 Ga0070686_100226852
327 Ga0070696_100157932
328 Ga0068856_101147357
329 Ga0068861_100401659
330 Ga0068861_100460028
331 Ga0081455_10013758
332 Ga0081538_10031057
333 Ga0081540_1005959
334 Ga0081540_1028305
335 Ga0070712_100128531
336 Ga0097621_100224573
337 Ga0075428_100728343
338 Ga0075431_100186265
339 Ga0075433_10637099
340 Ga0075434_100652385
341 Ga0075434_101421029
342 Ga0075436_100270359
343 Ga0075436_100431556
344 Ga0111539_10833942
345 Ga0105245_10136024
346 Ga0105245_10170939
347 Ga0105245_10700677
348 Ga0105247_10390031
349 Ga0114129_10072326
350 Ga0114129_10597325
351 Ga0105241_10751833
352 Ga0105242_10109357
353 Ga0105248_10600670
354 Ga0105248_11965402
355 Ga0105249_10362091
356 Ga0105249_10739056
357 Ga0105239_10274164
358 Ga0157374_10219303
359 Ga0157378_10237630
360 Ga0163162_11398129
361 Ga0157375_10013629
362 Ga0157379_10329359
363 Ga0157376_10194737
364 Ga0207654_10168003
365 Ga0207707_10978491
366 Ga0207693_10097318
367 Ga0207657_10018162
368 Ga0207687_10149036
369 Ga0207687_10291471
370 Ga0207690_10535683
371 Ga0207686_10344630
372 Ga0207709_10350704
373 Ga0207669_10097715
374 Ga0207711_10084182
375 Ga0207661_10262887
376 Ga0207661_10473075
377 Ga0207712_11496978
378 Ga0207677_10360756
379 Ga0207708_10707098
380 Ga0207648_10137097
381 Ga0207675_100373984
382 Ga0207675_100533684
383 Ga0207683_10059248
384 Ga0207428_10377950
385 Ga0207428_10402291
386 Ga0307406_10044873
387 Ga0307406_10202645
388 Ga0307409_100279113
389 Ga0307409_100346009
390 Ga0307416_100058645
391 Ga0307416_100250383
392 Ga0307415_100247696
393 Ga0307415_100275194
394 Ga0373939_0194846
395 Ga0373941_0082168
396 Ga0373945_0088261
397 Ga0373943_0035705
398 Ga0373931_0634351
399 Ga0373935_0018597
400 Ga0373927_0206385
401 Ga0373947_0003525
402 Ga0373925_0004301
403 Ga0373925_0970229
404 Ga0395900_0010317
405 Ga0395900_0323727
406 Ga0395898_0010547
407 Ga0395898_0511530
408 Ga0395905_0003930
409 Ga0395905_0836038
410 Ga0395901_0028999
411 Ga0395901_0129689
412 Ga0395901_0201991
413 Ga0439461_0030275
414 Ga0451800_0391591
415 Ga0451839_0708213
416 Ga0451841_0513170
417 Ga0451849_0496642
418 Ga0451851_0632787
419 Ga0451843_0485133
420 Ga0451853_0751310
421 Ga0451853_1564462
422 Ga0451853_1831857
423 Ga0439437_002273
424 Ga0450920_023819
425 Ga0450907_013993
426 Ga0439434_0023844
427 Ga0439435_0034251
428 Ga0450918_006509
429 Ga0466972_0114551
430 Ga0466968_0059341
431 Ga0466960_0034355
432 Ga0466959_1218051
433 Ga0451576_1350947
434 Ga0466967_0171842
435 Ga0466967_1160394
436 Ga0495629_0047048
437 Ga0495629_0110243
438 Ga0495641_0000382
439 Ga0495641_0310779
440 Ga0495651_0277344
441 Ga0495653_0072135
442 Ga0495653_0145914
443 Ga0495582_0000645
444 Ga0495582_0103949
445 Ga0495582_0407324
446 Ga0495639_0019499
447 Ga0495662_0007686
448 Ga0495585_0435948
449 Ga0495594_0119189
450 Ga0495607_0277217
451 Ga0495608_0010713
452 Ga0495608_0130830
453 Ga0495618_0267828
454 Ga0495628_0316059
455 Ga0495630_0026780
456 Ga0495630_0073893
457 Ga0495631_0186365
458 Ga0495644_0114259
459 Ga0495663_0028993
460 Ga0495652_0124308
461 Ga0495665_0001193
462 Ga0495640_0052611
463 Ga0495640_0514695
464 Ga0495586_0011410
465 Ga0495587_0170894
466 Ga0495645_0124197
467 Ga0495667_0042124
468 Ga0495667_0358655
469 Ga0495656_0134794
470 Ga0495634_0158450
471 Ga0495635_0038056
472 Ga0495635_0058984
473 Ga0495635_0709219
474 Ga0495588_0258732
475 Ga0495657_0483041
476 Ga0495599_0076916
477 Ga0495646_0172507
478 Ga0495647_0004853
479 Ga0495658_0002310
480 Ga0495658_0141749
481 Ga0495613_0003260
482 Ga0495613_0266839
483 Ga0495624_0011732
484 Ga0495624_0226239
485 Ga0495600_0113019
486 Ga0495581_0021369
487 Ga0495674_0016873
488 Ga0495674_0087767
489 Ga0495676_0006363
490 Ga0495676_0247326
491 Ga0495680_0032541
492 Ga0495680_0138998
493 Ga0495673_0177056
494 Ga0495684_0010187
495 Ga0495684_0067382
496 Ga0495593_0006704
497 Ga0495614_0073026
498 Ga0495614_0130366
499 Ga0496101_0039005
500 Ga0496101_0347192
501 Ga0496102_0061985
502 Ga0496104_0003326
503 Ga0496104_0171388
504 Ga0496105_0009203
505 Ga0496105_0286896
506 Ga0496106_0663439
507 Ga0496107_0501476
508 Ga0496108_0123395
509 Ga0496108_0240699
510 Ga0496109_0056275
511 Ga0496109_0558059
512 Ga0496110_0086215
513 Ga0496111_0071671
514 Ga0496111_0171755
515 Ga0496112_0001530
516 Ga0496113_0127118
517 Ga0496114_0033124
518 Ga0496114_0080490
519 Ga0496114_0292614
520 Ga0496114_1184168
521 Ga0496115_0001957
522 Ga0496115_0483358
523 Ga0501031_0004099
524 Ga0501031_0021614
525 Ga0501032_0035979
526 Ga0501033_0051468
527 Ga0501036_0001027
528 Ga0501036_0038811
529 Ga0501036_0484963
530 Ga0501037_0012964
531 Ga0501037_0032041
532 Ga0501038_0011389
533 Ga0501038_0070059
534 Ga0501038_0153325
535 Ga0501039_0017673
536 Ga0501039_0134433
537 Ga0501040_0004872
538 Ga0501041_0027037
539 Ga0501041_0072234
540 Ga0501041_0551336
541 Ga0501042_0000334
542 Ga0501042_0026797
543 Ga0501043_0428953
544 Ga0501046_0022389
545 Ga0501046_0141483
546 Ga0501048_0002894
547 Ga0501048_0003753
548 Ga0501048_0657716
549 Ga0501048_0958748
550 Ga0501067_0008835
551 Ga0501067_0121011
552 Ga0501068_0007854
553 Ga0501068_0052485
554 Ga0501068_0545172
555 Ga0501069_0010165
556 Ga0501069_0088547
557 Ga0501071_0000345
558 Ga0501071_0000651
559 Ga0501071_0485818
560 Ga0501071_0924651
561 Ga0501072_0131654
562 Ga0501073_0273351
563 Ga0501074_0000765
564 Ga0501074_0043447
565 Ga0501075_0038185
566 Ga0501075_0269882
567 Ga0501075_0534134
568 Ga0501076_0001235
569 Ga0501076_0027563
570 Ga0501076_0268656
571 Ga0501077_0003278
572 Ga0501077_0043829
573 Ga0501077_0673808
574 Ga0501077_0763272
575 Ga0501079_0001742
576 Ga0501079_0047722
577 Ga0501079_0064690
578 Ga0501080_0021050
579 Ga0501080_0200552
580 Ga0501080_0250621
581 Ga0501080_0680610
582 Ga0501081_0048004
583 Ga0501081_0066525
584 Ga0501083_0260799
585 Ga0501035_0055540
586 Ga0501035_0057550
587 Ga0501035_0223062
588 Ga0501035_0389989
589 Ga0501045_0000466
590 Ga0501045_0021227
591 Ga0501045_0247354
592 nmdc:mga05p37_24832_c1
593 nmdc:mga05p37_480957_c1
594 nmdc:mga08y16_203399_c1
595 nmdc:mga0n895_240986_c1
596 nmdc:mga0n895_729315_c1
597 nmdc:mga08x19_115375_c1
598 nmdc:mga08x19_631942_c1
599 nmdc:mga08x19_825160_c1
600 nmdc:mga0a205_479347_c1
601 Ga0495601_0032453
602 Ga0495601_0373044
603 Ga0495595_0006996
604 Ga0495619_0003157
605 Ga0495619_0004926
606 Ga0501084_0001413
607 Ga0501084_0054611
608 Ga0501082_0004874
609 Ga0501082_0041542
610 Ga0530510_0001475
611 Ga0530510_0011907
612 Ga0530510_0017990
613 Ga0530510_0077133
614 Ga0530510_0096836

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04073

tRNA_edit

Aminoacyl-tRNA editing domain

56

176

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rij-assembly2.cif.gz_B epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins 0.9371 9 163
2cx5-assembly3.cif.gz_C crystal structure of a putative trans-editing enzyme for prolyl trna synthetase 0.936 9 163
3ri0-assembly2.cif.gz_B epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins 0.9329 9 163
1wdv-assembly2.cif.gz_B crystal structure of hypothetical protein ape2540 0.9323 15 163
3ri0-assembly1.cif.gz_A epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins 0.9302 9 163
ID Description Score Start End Superfamily
3rijC00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9134 9 163 3.90.960.10
1wdvB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9109 15 163 3.90.960.10
1wdvB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8994 15 163 3.90.960.10
3rijC00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8963 9 163 3.90.960.10
1dbxB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8921 15 164 3.90.960.10
ID Description Score Start End GO Terms
AF-A0A538KXQ4-F1-model_v4 YbaK/EbsC family protein 0.9836 1 165 GO:0002161
AF-A0A7V9T975-F1-model_v4 YbaK/EbsC family protein 0.9802 6 165 GO:0002161
AF-A0A7W0WB52-F1-model_v4 YbaK/EbsC family protein 0.98 25 165 GO:0002161
AF-A0A7V9I389-F1-model_v4 YbaK/EbsC family protein 0.9796 7 165 GO:0002161
AF-A0A1N6R9C0-F1-model_v4 Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC 0.9782 9 161 GO:0002161

Map