F398916

General Info

Members Datasets Scaffolds Average Seq Length
306 192 282 614

Family's Representative Sequence

Representative Sequence 3300053134|Ga0500658_0005053|Ga0500658_0005053_2162_4423
Length 742
Sequence LRNSPTAAEELLWSRLRKSQLGGFKFTRQLPVAGHFGDFGCRRARLIVELDGSQHAEQAEQDAERTRRIEAEGYRVIRFWNNDLTTNMAGVLETILMTATACGERAREGEQEGAEMSLTPQFLDELRARTLLSGLIAKTVKLQKAGREFRACCPFHQEKTPSFYVNDDKGFYHCFGCSAHGDAIRWMTDQRGLPFIDAVKELAQAAGMEMPEQDRRSAEKAERAKGLHEAMADAAAWFVDKLNGIEGTEARNVLKRRGITEEIARSFGLGFAPDSRGKLKEALKGYGDAMLVEAGMLIQVEEKEPYDRFRGRLMIPIRDVRGRTIAFGGRIIGDGEPKYLNSPETPLFDKGRTLYNLDRAQAAARKVDRIIAVEGYMDVIALAQAGFGEAVAPLGTALTEHQLERLWRIAEVPLLCFDGDSAGQKAALRAAHRALPMLQPGRSLAFVTLPDGLDPDDLVRTKGAAAFEALLKTPQPLVDRLWQSEVAAEPLDTPEQRAGLKRRLADLAGSIGDPNVKSEYLAEFRARTDAHFGRGPRAFEARSQRGPGAPARGKRDRRGNWQPPEIMPGATMRGVVASGGLDPILARAVLAGLIRHPAEIARHMEVLGSLRSASGALGKLFEAVIDVALEDRQLDSGKVLTILARSGFDSVASDLLRADTLPFSFTRSQADEARAREDLNEAIAVMVAQPAVDAALAEATAALSRDGSEEAFTRQVALSRKRQELEARLANLMLADEEEFDD

Samples

Sample ID Description Type Environment
1 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
2 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
3 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
4 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
5 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
6 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
7 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
8 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
9 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
10 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
11 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
12 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
13 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
14 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
15 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
16 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
17 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
18 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
19 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
20 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
21 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
22 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
23 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
24 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
25 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
26 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
27 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
28 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
29 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
30 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
33 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
34 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
35 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
36 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
37 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
38 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
39 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
40 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
41 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
42 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
43 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
44 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
45 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
46 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
47 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
48 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
49 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
58 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
59 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
60 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
61 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
62 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
63 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
64 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
65 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
66 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
67 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
68 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
71 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
72 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
78 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
79 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
80 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
82 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
83 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
88 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
90 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
93 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
124 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
125 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
126 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
127 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
128 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
129 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
130 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
131 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
132 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
133 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
134 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
135 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
136 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
137 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
138 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
143 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
144 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
145 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
156 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
167 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
168 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
172 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
173 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
174 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
175 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
176 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
177 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
178 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
179 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
180 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
181 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
182 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
183 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
184 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
186 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
187 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
188 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
189 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
190 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
191 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
192 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.16
Metatranscriptomes 0
Isolates 7.84

Biome Distribution

Category Percentage (%)
Aerial Root 1.63
Bulb 0
Endosphere 34.64
Nodule 0
Rhizoplane 3.59
Rhizosphere 47.71
Stem 0
Stem Tuber 0
Unclassified 12.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000337 3300002459 Bacteria 16969
2 JGI25150J39212_1000187 3300002774 Bacteria 34865
3 JGI25150J39212_1000220 3300002774 Bacteria 31276
4 JGI25151J46595_10014887 3300003187 Bacteria 3452
5 JGI25165J46597_1000089 3300003214 Bacteria 169547
6 JGI25153J46596_10000044 3300003215 Bacteria 154263
7 Ga0055526_1010578 3300003771 Bacteria 4274
8 Ga0055537_1003029 3300003773 Bacteria 5308
9 Ga0055537_1004673 3300003773 Bacteria 3865
10 Ga0055524_1001182 3300003775 Bacteria 15575
11 Ga0055536_1002772 3300003781 Bacteria 9701
12 Ga0055530_10000017 3300003791 Bacteria 144027
13 Ga0055530_10000978 3300003791 Bacteria 23058
14 Ga0055530_10011675 3300003791 Bacteria 3136
15 Ga0055540_1000643 3300003792 Bacteria 24786
16 Ga0055531_10001645 3300003794 Bacteria 16155
17 Ga0055531_10002842 3300003794 Bacteria 11326
18 Ga0055531_10011315 3300003794 Bacteria 4323
19 Ga0055531_10013743 3300003794 Bacteria 3708
20 Ga0055531_10016773 3300003794 Bacteria 3136
21 Ga0055531_10018168 3300003794 Bacteria 2919
22 Ga0065165_1006933 3300005262 Bacteria 5748
23 Ga0065165_1008859 3300005262 Bacteria 4620
24 Ga0070658_10000001 3300005327 Bacteria 856789
25 Ga0070658_10011747 3300005327 Bacteria 7027
26 Ga0070690_100068250 3300005330 Bacteria 2306
27 Ga0070670_100014010 3300005331 Bacteria 6875
28 Ga0070666_10001821 3300005335 Bacteria 12988
29 Ga0070666_10011895 3300005335 Bacteria 5473
30 Ga0070660_100000048 3300005339 Bacteria 69472
31 Ga0070668_100016453 3300005347 Bacteria 5529
32 Ga0070669_100000008 3300005353 Bacteria 226764
33 Ga0070669_100000844 3300005353 Bacteria 22228
34 Ga0070671_100000010 3300005355 Bacteria 202799
35 Ga0070671_100000054 3300005355 Bacteria 77908
36 Ga0070671_100026458 3300005355 Bacteria 4767
37 Ga0070659_100034041 3300005366 Bacteria 3961
38 Ga0070659_100041202 3300005366 Bacteria 3609
39 Ga0070667_100000198 3300005367 Bacteria 71378
40 Ga0070667_100006048 3300005367 Bacteria 10053
41 Ga0070686_100013380 3300005544 Bacteria 4697
42 Ga0068855_100002646 3300005563 Bacteria 22080
43 Ga0068855_100072036 3300005563 Bacteria 4017
44 Ga0068857_100041486 3300005577 Bacteria 4081
45 Ga0068852_100013014 3300005616 Bacteria 6350
46 Ga0068859_100000396 3300005617 Bacteria 43397
47 Ga0068859_100045715 3300005617 Bacteria 4398
48 Ga0068864_100000851 3300005618 Bacteria 25734
49 Ga0068864_100004572 3300005618 Bacteria 11360
50 Ga0068861_100000052 3300005719 Bacteria 54577
51 Ga0068861_100001538 3300005719 Bacteria 14628
52 Ga0068863_100002156 3300005841 Bacteria 19515
53 Ga0068863_100003687 3300005841 Bacteria 15135
54 Ga0068863_100021815 3300005841 Bacteria 6111
55 Ga0068858_100000681 3300005842 Bacteria 35424
56 Ga0068858_100003942 3300005842 Bacteria 14653
57 Ga0068858_100004671 3300005842 Bacteria 13425
58 Ga0068858_100008863 3300005842 Bacteria 9644
59 Ga0068860_100002070 3300005843 Bacteria 21141
60 Ga0068860_100004330 3300005843 Bacteria 14511
61 Ga0068860_100010788 3300005843 Bacteria 9018
62 Ga0068862_100000067 3300005844 Bacteria 123668
63 Ga0068862_100000334 3300005844 Bacteria 51308
64 Ga0081539_10022891 3300005985 Bacteria 4114
65 Ga0075365_10015842 3300006038 Bacteria 4568
66 Ga0075368_10000205 3300006042 Bacteria 16442
67 Ga0075368_10000762 3300006042 Bacteria 9891
68 Ga0075364_10000558 3300006051 Bacteria 19112
69 Ga0075432_10000396 3300006058 Bacteria 12682
70 Ga0075362_10000104 3300006177 Bacteria 23319
71 Ga0075362_10005474 3300006177 Bacteria 4650
72 Ga0075367_10004836 3300006178 Bacteria 6639
73 Ga0075367_10010966 3300006178 Bacteria 4777
74 Ga0075369_10012386 3300006186 Bacteria 3370
75 Ga0075366_10000168 3300006195 Bacteria 28069
76 Ga0075366_10001553 3300006195 Bacteria 11489
77 Ga0075370_10000032 3300006353 Bacteria 44839
78 Ga0075370_10010873 3300006353 Bacteria 4771
79 Ga0075370_10033794 3300006353 Bacteria 2865
80 Ga0097620_100000396 3300006931 Bacteria 43397
81 Ga0097620_100045715 3300006931 Bacteria 4398
82 Ga0105240_10023630 3300009093 Bacteria 8120
83 Ga0105245_10001264 3300009098 Bacteria 22840
84 Ga0105247_10001269 3300009101 Bacteria 18684
85 Ga0105248_10017942 3300009177 Bacteria 7811
86 Ga0105248_10032166 3300009177 Bacteria 5863
87 Ga0105249_10000105 3300009553 Bacteria 117181
88 Ga0105249_10001016 3300009553 Bacteria 24808
89 Ga0157369_10003214 3300013105 Bacteria 19483
90 Ga0163162_10029251 3300013306 Bacteria 5452
91 Ga0163163_10049150 3300014325 Bacteria 4149
92 Ga0183363_1013 3300015690 Bacteria 79638
93 Ga0213873_10000008 3300021358 Bacteria 263363
94 Ga0213876_10000005 3300021384 Bacteria 727326
95 Ga0213876_10000354 3300021384 Bacteria 39484
96 Ga0209147_101206 3300025229 Bacteria 10367
97 Ga0207425_1000026 3300025245 Bacteria 301303
98 Ga0207425_1004060 3300025245 Bacteria 4482
99 Ga0209233_1000154 3300025261 Bacteria 169616
100 Ga0209565_1000010 3300025263 Bacteria 687724
101 Ga0209565_1000064 3300025263 Bacteria 180732
102 Ga0209673_1004268 3300025273 Bacteria 7759
103 Ga0209675_1000555 3300025291 Bacteria 27086
104 Ga0209675_1012602 3300025291 Bacteria 2710
105 Ga0209676_1000155 3300025292 Bacteria 165151
106 Ga0209676_1001076 3300025292 Bacteria 30900
107 Ga0209676_1008747 3300025292 Bacteria 4462
108 Ga0209676_1009010 3300025292 Bacteria 4365
109 Ga0209676_1013647 3300025292 Bacteria 3110
110 Ga0209025_1000513 3300025294 Bacteria 74006
111 Ga0209025_1008149 3300025294 Bacteria 7597
112 Ga0209564_1001343 3300025295 Bacteria 26110
113 Ga0209758_1000004 3300025297 Bacteria 1375322
114 Ga0209050_1000001 3300025298 Bacteria 3563507
115 Ga0209050_1000026 3300025298 Bacteria 499134
116 Ga0209050_1000068 3300025298 Bacteria 298849
117 Ga0209050_1002494 3300025298 Bacteria 15561
118 Ga0209050_1002807 3300025298 Bacteria 13915
119 Ga0209050_1008218 3300025298 Bacteria 5633
120 Ga0209256_1000034 3300025299 Bacteria 388475
121 Ga0207426_1013292 3300025302 Bacteria 3055
122 Ga0209051_1000270 3300025303 Bacteria 86574
123 Ga0209051_1019950 3300025303 Bacteria 2909
124 Ga0209257_1000009 3300025304 Bacteria 1205047
125 Ga0209257_1000193 3300025304 Bacteria 151777
126 Ga0209257_1001718 3300025304 Bacteria 24492
127 Ga0209257_1005766 3300025304 Bacteria 8456
128 Ga0209257_1005772 3300025304 Bacteria 8444
129 Ga0209257_1007361 3300025304 Bacteria 6670
130 Ga0207697_10000036 3300025315 Bacteria 49927
131 Ga0207710_10001449 3300025900 Bacteria 11812
132 Ga0207680_10000044 3300025903 Bacteria 64236
133 Ga0207705_10000002 3300025909 Bacteria 2046852
134 Ga0207705_10000004 3300025909 Bacteria 705756
135 Ga0207695_10015212 3300025913 Bacteria 9073
136 Ga0207657_10000391 3300025919 Bacteria 46247
137 Ga0207681_10000002 3300025923 Bacteria 985597
138 Ga0207681_10000232 3300025923 Bacteria 43369
139 Ga0207687_10003410 3300025927 Bacteria 10718
140 Ga0207644_10000002 3300025931 Bacteria 942221
141 Ga0207644_10000003 3300025931 Bacteria 585905
142 Ga0207644_10019775 3300025931 Bacteria 4572
143 Ga0207711_10011649 3300025941 Bacteria 7305
144 Ga0207711_10017656 3300025941 Bacteria 5926
145 Ga0207667_10062151 3300025949 Bacteria 3906
146 Ga0207667_10066324 3300025949 Bacteria 3763
147 Ga0207712_10000015 3300025961 Bacteria 346689
148 Ga0207712_10004521 3300025961 Bacteria 8781
149 Ga0207668_10000383 3300025972 Bacteria 28143
150 Ga0207640_10009386 3300025981 Bacteria 5477
151 Ga0207640_10036168 3300025981 Bacteria 3097
152 Ga0207703_10001326 3300026035 Bacteria 22701
153 Ga0207703_10002565 3300026035 Bacteria 15695
154 Ga0207703_10005752 3300026035 Bacteria 9934
155 Ga0207703_10008591 3300026035 Bacteria 8061
156 Ga0207641_10002252 3300026088 Bacteria 17999
157 Ga0207641_10003709 3300026088 Bacteria 13453
158 Ga0207641_10012820 3300026088 Bacteria 6871
159 Ga0207676_10000489 3300026095 Bacteria 33247
160 Ga0207676_10007867 3300026095 Bacteria 7580
161 Ga0207674_10032877 3300026116 Bacteria 5437
162 Ga0207675_100000035 3300026118 Bacteria 95190
163 Ga0207675_100002191 3300026118 Bacteria 19409
164 Ga0207698_10007224 3300026142 Bacteria 6958
165 Ga0207698_10112766 3300026142 Bacteria 2283
166 Ga0209813_10000071 3300027866 Bacteria 37829
167 Ga0209813_10000117 3300027866 Bacteria 28670
168 Ga0268265_10000021 3300028380 Bacteria 272292
169 Ga0268265_10002184 3300028380 Bacteria 15120
170 Ga0268264_10000010 3300028381 Bacteria 596543
171 Ga0268264_10000817 3300028381 Bacteria 33552
172 Ga0307508_10000499 3300031616 Bacteria 47166
173 Ga0307412_10000959 3300031911 Bacteria 16498
174 Ga0307412_10001229 3300031911 Bacteria 14546
175 Ga0307414_10000938 3300032004 Bacteria 14900
176 Ga0307414_10020203 3300032004 Bacteria 4146
177 Ga0307414_10082176 3300032004 Bacteria 2361
178 Ga0307510_10008197 3300033180 Bacteria 12445
179 Ga0436365_0146431 3300039437 Bacteria 62044
180 Ga0436365_1242187 3300039437 Bacteria 8691
181 Ga0436365_1526301 3300039437 Bacteria 136420
182 Ga0436362_0077942 3300039453 Bacteria 46323
183 Ga0439431_0000613 3300041997 Bacteria 7577
184 Ga0439445_0003640 3300042004 Bacteria 3459
185 Ga0439432_000368 3300042006 Bacteria 16610
186 Ga0439462_0001072 3300042015 Bacteria 5902
187 Ga0495627_000248 3300046453 Bacteria 56262
188 Ga0495638_0007575 3300046460 Bacteria 7766
189 Ga0495584_0025381 3300046491 Bacteria 3005
190 Ga0495596_0007580 3300046500 Bacteria 4890
191 Ga0495606_0069249 3300046507 Bacteria 2229
192 Ga0495610_0027643 3300046512 Bacteria 3011
193 Ga0495632_0000060 3300046519 Bacteria 120480
194 Ga0495637_0002973 3300046520 Bacteria 9117
195 Ga0495643_0000014 3300046522 Bacteria 314632
196 Ga0495643_0014397 3300046522 Bacteria 4707
197 Ga0495663_0000007 3300046525 Bacteria 262438
198 Ga0495622_0013512 3300046557 Bacteria 3786
199 Ga0495633_0001277 3300046558 Bacteria 19975
200 Ga0495633_0002982 3300046558 Bacteria 11574
201 Ga0495668_0000002 3300046616 Bacteria 763179
202 Ga0495668_0039600 3300046616 Bacteria 2631
203 Ga0495625_0000977 3300046660 Bacteria 37974
204 Ga0495625_0001479 3300046660 Bacteria 28402
205 Ga0495625_0014953 3300046660 Bacteria 6168
206 Ga0495670_0000009 3300046691 Bacteria 210956
207 Ga0495671_0000032 3300046692 Bacteria 201185
208 Ga0495671_0009947 3300046692 Bacteria 5291
209 Ga0495677_0006691 3300047445 Bacteria 4339
210 Ga0495681_0009665 3300047470 Bacteria 5916
211 Ga0496101_0024896 3300048904 Bacteria 4149
212 Ga0496103_0000076 3300048906 Bacteria 113209
213 Ga0496106_0000284 3300048909 Bacteria 35805
214 Ga0496107_0007109 3300048910 Bacteria 7711
215 Ga0496108_0018029 3300048911 Bacteria 5775
216 Ga0496111_0033460 3300048914 Bacteria 3666
217 Ga0496113_0013818 3300048916 Bacteria 5485
218 Ga0496114_0015588 3300048917 Bacteria 6111
219 Ga0496115_0000597 3300048918 Bacteria 27647
220 Ga0496116_0000248 3300048919 Bacteria 97391
221 Ga0496116_0001044 3300048919 Bacteria 33756
222 Ga0496117_0000201 3300048920 Bacteria 117679
223 Ga0496118_0000097 3300048921 Bacteria 160837
224 Ga0496118_0031376 3300048921 Bacteria 4407
225 Ga0496121_0000208 3300048924 Bacteria 129753
226 Ga0496121_0000367 3300048924 Bacteria 92745
227 Ga0496121_0088020 3300048924 Bacteria 2436
228 Ga0496122_0000934 3300048925 Bacteria 53129
229 Ga0496123_0000740 3300048926 Bacteria 52939
230 Ga0496123_0002288 3300048926 Bacteria 24045
231 Ga0496123_0043164 3300048926 Bacteria 3101
232 Ga0496123_0067922 3300048926 Bacteria 2248
233 Ga0496124_0000202 3300048927 Bacteria 117650
234 Ga0496124_0010029 3300048927 Bacteria 9666
235 Ga0496124_0011225 3300048927 Bacteria 8978
236 Ga0496124_0031440 3300048927 Bacteria 4698
237 Ga0496124_0059549 3300048927 Bacteria 3207
238 Ga0496125_0007624 3300048928 Bacteria 11480
239 Ga0496126_0000097 3300048929 Bacteria 206014
240 Ga0496126_0039775 3300048929 Bacteria 4361
241 Ga0501031_0060691 3300049568 Bacteria 2464
242 Ga0501071_0050400 3300049587 Bacteria 2999
243 Ga0501223_000048 3300049663 Bacteria 41037
244 Ga0501233_000534 3300049668 Bacteria 6125
245 Ga0501257_001638 3300049686 Bacteria 4685
246 Ga0501035_0041150 3300049822 Bacteria 4173
247 Ga0501044_0015141 3300049823 Bacteria 8311
248 Ga0501044_0082347 3300049823 Bacteria 3256
249 nmdc:mga03683_15224_c1 3300050489 Bacteria 2867
250 nmdc:mga03683_57_c1 3300050489 Bacteria 46363
251 nmdc:mga03n38_12213_c1 3300050490 Bacteria 3225
252 nmdc:mga03n38_977_c1 3300050490 Bacteria 3803
253 nmdc:mga00v17_5943_c1 3300050491 Bacteria 6454
254 nmdc:mga0k408_2211_c1 3300050493 Bacteria 9628
255 nmdc:mga0k408_488_c1 3300050493 Bacteria 21772
256 nmdc:mga06z11_25_c1 3300050494 Bacteria 65281
257 nmdc:mga06z11_406_c1 3300050494 Bacteria 16221
258 nmdc:mga04h51_2555_c1 3300050495 Bacteria 4332
259 nmdc:mga07m45_10025_c1 3300050496 Bacteria 4932
260 nmdc:mga07m45_4_c1 3300050496 Bacteria 409607
261 nmdc:mga07m45_8_c1 3300050496 Bacteria 214050
262 nmdc:mga0sz30_4336_c1 3300050516 Bacteria 5119
263 Ga0500643_001817 3300053087 Bacteria 11670
264 Ga0500643_002744 3300053087 Bacteria 8819
265 Ga0500643_009975 3300053087 Bacteria 3579
266 Ga0500643_012866 3300053087 Bacteria 2981
267 Ga0500643_013333 3300053087 Bacteria 2906
268 Ga0500566_0007741 3300053094 Bacteria 6371
269 Ga0500556_0000500 3300053104 Bacteria 27261
270 Ga0500592_000160 3300053116 Bacteria 13568
271 Ga0500642_0000002 3300053130 Bacteria 795093
272 Ga0500658_0005053 3300053134 Bacteria 4908
273 Ga0500658_0008114 3300053134 Bacteria 3882
274 Ga0500568_0022677 3300053139 Bacteria 2681
275 Ga0500568_0026363 3300053139 Bacteria 2440
276 Ga0500568_0029722 3300053139 Bacteria 2265
277 Ga0500573_0000015 3300053140 Bacteria 192264
278 Ga0500604_0000225 3300053151 Bacteria 16207
279 Ga0500616_0000737 3300053153 Bacteria 37796
280 Ga0500624_000015 3300053157 Bacteria 161928
281 Ga0500627_0000002 3300053158 Bacteria 235747
282 Ga0500645_008411 3300053730 Bacteria 3527

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046491 Ga0495584_0025381 Ga0495584_0025381_160_1635 463
2 3300046507 Ga0495606_0069249 Ga0495606_0069249_513_2198 497
3 3300048924 Ga0496121_0088020 Ga0496121_0088020_12_1739 522
4 3300013105 Ga0157369_10003214 Ga0157369_100032148 523
5 3300006177 Ga0075362_10000104 Ga0075362_100001046 533
6 3300006186 Ga0075369_10012386 Ga0075369_100123862 533
7 3300006195 Ga0075366_10000168 Ga0075366_1000016823 533
8 3300050489 nmdc:mga03683_57_c1 nmdc:mga03683_57_c1_34983_36833 533
9 3300050490 nmdc:mga03n38_12213_c1 nmdc:mga03n38_12213_c1_829_2679 533
10 3300050493 nmdc:mga0k408_488_c1 nmdc:mga0k408_488_c1_11717_13567 533
11 3300050516 nmdc:mga0sz30_4336_c1 nmdc:mga0sz30_4336_c1_2631_4481 533
12 3300005366 Ga0070659_100034041 Ga0070659_1000340412 535
13 3300046519 Ga0495632_0000060 Ga0495632_0000060_43072_44955 538
14 3300046520 Ga0495637_0002973 Ga0495637_0002973_3906_5789 538
15 3300046522 Ga0495643_0000014 Ga0495643_0000014_137126_139009 538
16 3300046525 Ga0495663_0000007 Ga0495663_0000007_86128_88011 538
17 3300046558 Ga0495633_0001277 Ga0495633_0001277_3712_5619 538
18 3300046558 Ga0495633_0002982 Ga0495633_0002982_2444_4327 538
19 3300046692 Ga0495671_0000032 Ga0495671_0000032_23679_25562 538
20 3300047470 Ga0495681_0009665 Ga0495681_0009665_3173_5056 538
21 3300025229 Ga0209147_101206 Ga0209147_1012063 543
22 3300021384 Ga0213876_10000354 Ga0213876_1000035433 546
23 3300039437 Ga0436365_1526301 Ga0436365_1526301_5967_7799 546
24 3300046453 Ga0495627_000248 Ga0495627_000248_42612_44522 548
25 3300005327 Ga0070658_10011747 Ga0070658_100117474 549
26 3300005616 Ga0068852_100013014 Ga0068852_1000130144 549
27 3300006051 Ga0075364_10000558 Ga0075364_1000055814 549
28 3300006195 Ga0075366_10001553 Ga0075366_100015535 549
29 3300009093 Ga0105240_10023630 Ga0105240_100236302 549
30 3300025909 Ga0207705_10000004 Ga0207705_10000004468 549
31 3300025913 Ga0207695_10015212 Ga0207695_100152127 549
32 3300025981 Ga0207640_10009386 Ga0207640_100093864 549
33 3300026142 Ga0207698_10007224 Ga0207698_100072244 549
34 3300039437 Ga0436365_1242187 Ga0436365_1242187_3723_5564 549
35 3300050493 nmdc:mga0k408_2211_c1 nmdc:mga0k408_2211_c1_1862_3628 549
36 3300005842 Ga0068858_100000681 Ga0068858_1000006813 550
37 3300026142 Ga0207698_10112766 Ga0207698_101127661 550
38 3300031616 Ga0307508_10000499 Ga0307508_1000049918 551
39 3300006353 Ga0075370_10000032 Ga0075370_1000003225 552
40 3300046616 Ga0495668_0039600 Ga0495668_0039600_276_2159 552
41 3300046660 Ga0495625_0014953 Ga0495625_0014953_2950_4836 552
42 3300050496 nmdc:mga07m45_8_c1 nmdc:mga07m45_8_c1_21024_22847 552
43 3300053087 Ga0500643_013333 Ga0500643_013333_145_2031 552
44 3300053104 Ga0500556_0000500 Ga0500556_0000500_22272_24158 552
45 3300053130 Ga0500642_0000002 Ga0500642_0000002_148666_150552 552
46 3300053139 Ga0500568_0026363 Ga0500568_0026363_36_1886 552
47 3300053151 Ga0500604_0000225 Ga0500604_0000225_2034_3884 552
48 3300053153 Ga0500616_0000737 Ga0500616_0000737_34227_36077 552
49 3300053730 Ga0500645_008411 Ga0500645_008411_80_1951 552
50 3300009098 Ga0105245_10001264 Ga0105245_1000126419 553
51 3300025927 Ga0207687_10003410 Ga0207687_100034106 553
52 3300048925 Ga0496122_0000934 Ga0496122_0000934_3969_5843 555
53 3300048926 Ga0496123_0000740 Ga0496123_0000740_47185_49059 555
54 3300003794 Ga0055531_10013743 Ga0055531_100137432 556
55 3300025304 Ga0209257_1001718 Ga0209257_100171821 556
56 3300049686 Ga0501257_001638 Ga0501257_001638_2196_4052 556
57 3300046616 Ga0495668_0000002 Ga0495668_0000002_381030_382916 557
58 3300053087 Ga0500643_001817 Ga0500643_001817_4566_6422 557
59 iso_pu_bacteria 2928027323 2928030930 557
60 iso_pu_bacteria 2984555340 2984557705 557
61 iso_pu_bacteria 2984564862 2984567930 557
62 iso_pu_bacteria 2993356040 2993358977 557
63 3300025304 Ga0209257_1007361 Ga0209257_10073612 558
64 3300053116 Ga0500592_000160 Ga0500592_000160_1296_3152 558
65 3300003781 Ga0055536_1002772 Ga0055536_10027725 559
66 3300003791 Ga0055530_10000017 Ga0055530_10000017131 559
67 3300003794 Ga0055531_10011315 Ga0055531_100113154 559
68 3300025291 Ga0209675_1000555 Ga0209675_10005558 559
69 3300025292 Ga0209676_1000155 Ga0209676_1000155140 559
70 3300025292 Ga0209676_1001076 Ga0209676_10010762 559
71 3300025292 Ga0209676_1009010 Ga0209676_10090102 559
72 3300025294 Ga0209025_1008149 Ga0209025_10081495 559
73 3300025298 Ga0209050_1000068 Ga0209050_100006814 559
74 3300025304 Ga0209257_1000193 Ga0209257_100019314 559
75 3300032004 Ga0307414_10000938 Ga0307414_1000093815 559
76 3300032004 Ga0307414_10020203 Ga0307414_100202034 559
77 3300046522 Ga0495643_0014397 Ga0495643_0014397_708_2606 559
78 3300046660 Ga0495625_0000977 Ga0495625_0000977_32784_34673 559
79 3300049568 Ga0501031_0060691 Ga0501031_0060691_507_2384 559
80 3300049822 Ga0501035_0041150 Ga0501035_0041150_90_1967 559
81 3300049823 Ga0501044_0082347 Ga0501044_0082347_1239_3116 559
82 3300053087 Ga0500643_002744 Ga0500643_002744_3271_5133 559
83 3300053139 Ga0500568_0029722 Ga0500568_0029722_55_1950 559
84 3300053158 Ga0500627_0000002 Ga0500627_0000002_48309_50204 559
85 3300053140 Ga0500573_0000015 Ga0500573_0000015_12811_14688 560
86 iso_pu_bacteria 2599185354 2600202664 560
87 iso_pu_bacteria 2599185359 2600224841 560
88 iso_pu_bacteria 2643221560 2643821106 560
89 iso_pu_bacteria 2643221563 2643832764 560
90 iso_pu_bacteria 2643221608 2644053441 560
91 iso_pu_bacteria 2643221622 2644126392 560
92 iso_pu_bacteria 2751185897 2753764450 560
93 iso_pu_bacteria 2818991466 2819713034 560
94 iso_pu_bacteria 2852653556 2852657110 560
95 iso_pu_bacteria 2879163058 2879165712 560
96 iso_pu_bacteria 2928526807 2928527572 560
97 iso_pu_bacteria 2928968154 2928968939 560
98 iso_pu_bacteria 2946787523 2946787952 560
99 iso_pu_bacteria 2990265787 2990266298 560
100 iso_pu_bacteria 2993693658 2993695909 560
101 3300003773 Ga0055537_1003029 Ga0055537_10030292 561
102 3300005331 Ga0070670_100014010 Ga0070670_1000140103 561
103 3300005335 Ga0070666_10001821 Ga0070666_100018218 561
104 3300005347 Ga0070668_100016453 Ga0070668_1000164532 561
105 3300005353 Ga0070669_100000008 Ga0070669_100000008116 561
106 3300005355 Ga0070671_100000010 Ga0070671_100000010155 561
107 3300005367 Ga0070667_100006048 Ga0070667_1000060484 561
108 3300005617 Ga0068859_100000396 Ga0068859_1000003964 561
109 3300005618 Ga0068864_100000851 Ga0068864_10000085116 561
110 3300005719 Ga0068861_100001538 Ga0068861_1000015388 561
111 3300005841 Ga0068863_100002156 Ga0068863_10000215617 561
112 3300005841 Ga0068863_100021815 Ga0068863_1000218153 561
113 3300005843 Ga0068860_100002070 Ga0068860_1000020702 561
114 3300005843 Ga0068860_100004330 Ga0068860_10000433014 561
115 3300005844 Ga0068862_100000067 Ga0068862_10000006742 561
116 3300005844 Ga0068862_100000334 Ga0068862_10000033413 561
117 3300006931 Ga0097620_100000396 Ga0097620_10000039637 561
118 3300009101 Ga0105247_10001269 Ga0105247_1000126910 561
119 3300009553 Ga0105249_10000105 Ga0105249_1000010539 561
120 3300009553 Ga0105249_10001016 Ga0105249_1000101623 561
121 3300013306 Ga0163162_10029251 Ga0163162_100292513 561
122 3300014325 Ga0163163_10049150 Ga0163163_100491503 561
123 3300025263 Ga0209565_1000064 Ga0209565_1000064157 561
124 3300025302 Ga0207426_1013292 Ga0207426_10132922 561
125 3300025315 Ga0207697_10000036 Ga0207697_100000368 561
126 3300025900 Ga0207710_10001449 Ga0207710_100014494 561
127 3300025903 Ga0207680_10000044 Ga0207680_100000444 561
128 3300025923 Ga0207681_10000002 Ga0207681_10000002208 561
129 3300025931 Ga0207644_10000002 Ga0207644_10000002207 561
130 3300025961 Ga0207712_10000015 Ga0207712_1000001539 561
131 3300025961 Ga0207712_10004521 Ga0207712_100045214 561
132 3300025972 Ga0207668_10000383 Ga0207668_1000038322 561
133 3300026035 Ga0207703_10005752 Ga0207703_100057524 561
134 3300026088 Ga0207641_10002252 Ga0207641_1000225216 561
135 3300026088 Ga0207641_10012820 Ga0207641_100128205 561
136 3300026095 Ga0207676_10000489 Ga0207676_1000048918 561
137 3300026118 Ga0207675_100002191 Ga0207675_1000021917 561
138 3300028380 Ga0268265_10000021 Ga0268265_10000021189 561
139 3300028380 Ga0268265_10002184 Ga0268265_100021849 561
140 3300028381 Ga0268264_10000010 Ga0268264_10000010426 561
141 3300028381 Ga0268264_10000817 Ga0268264_1000081721 561
142 3300048906 Ga0496103_0000076 Ga0496103_0000076_51590_53443 561
143 3300048919 Ga0496116_0001044 Ga0496116_0001044_28996_30849 561
144 3300048920 Ga0496117_0000201 Ga0496117_0000201_51397_53250 561
145 3300048921 Ga0496118_0000097 Ga0496118_0000097_64430_66283 561
146 3300048927 Ga0496124_0000202 Ga0496124_0000202_51368_53221 561
147 iso_pu_bacteria 2830075706 2830076563 561
148 iso_pu_bacteria 2885429604 2885431161 561
149 iso_pu_bacteria 2919709256 2919710592 561
150 iso_pu_bacteria 8057101203 8057103512 561
151 3300005719 Ga0068861_100000052 Ga0068861_10000005253 562
152 3300009177 Ga0105248_10017942 Ga0105248_100179428 562
153 3300025941 Ga0207711_10011649 Ga0207711_100116492 562
154 3300026118 Ga0207675_100000035 Ga0207675_10000003570 562
155 3300002774 JGI25150J39212_1000187 JGI25150J39212_100018736 563
156 3300002774 JGI25150J39212_1000220 JGI25150J39212_10002206 563
157 3300003187 JGI25151J46595_10014887 JGI25151J46595_100148872 563
158 3300003214 JGI25165J46597_1000089 JGI25165J46597_100008970 563
159 3300003215 JGI25153J46596_10000044 JGI25153J46596_100000449 563
160 3300003771 Ga0055526_1010578 Ga0055526_10105782 563
161 3300003773 Ga0055537_1004673 Ga0055537_10046732 563
162 3300003775 Ga0055524_1001182 Ga0055524_100118212 563
163 3300003791 Ga0055530_10000978 Ga0055530_1000097816 563
164 3300003791 Ga0055530_10011675 Ga0055530_100116751 563
165 3300003792 Ga0055540_1000643 Ga0055540_10006432 563
166 3300003794 Ga0055531_10001645 Ga0055531_1000164516 563
167 3300003794 Ga0055531_10002842 Ga0055531_100028424 563
168 3300003794 Ga0055531_10016773 Ga0055531_100167733 563
169 3300003794 Ga0055531_10018168 Ga0055531_100181683 563
170 3300005262 Ga0065165_1006933 Ga0065165_10069334 563
171 3300005262 Ga0065165_1008859 Ga0065165_10088591 563
172 3300005327 Ga0070658_10000001 Ga0070658_10000001496 563
173 3300005339 Ga0070660_100000048 Ga0070660_10000004831 563
174 3300005366 Ga0070659_100041202 Ga0070659_1000412022 563
175 3300005544 Ga0070686_100013380 Ga0070686_1000133804 563
176 3300005577 Ga0068857_100041486 Ga0068857_1000414862 563
177 3300005842 Ga0068858_100003942 Ga0068858_10000394210 563
178 3300005985 Ga0081539_10022891 Ga0081539_100228911 563
179 3300015690 Ga0183363_1013 Ga0183363_101350 563
180 3300021358 Ga0213873_10000008 Ga0213873_1000000850 563
181 3300021384 Ga0213876_10000005 Ga0213876_10000005554 563
182 3300025245 Ga0207425_1000026 Ga0207425_1000026104 563
183 3300025245 Ga0207425_1004060 Ga0207425_10040602 563
184 3300025261 Ga0209233_1000154 Ga0209233_100015483 563
185 3300025263 Ga0209565_1000010 Ga0209565_1000010500 563
186 3300025273 Ga0209673_1004268 Ga0209673_10042688 563
187 3300025291 Ga0209675_1012602 Ga0209675_10126022 563
188 3300025292 Ga0209676_1008747 Ga0209676_10087472 563
189 3300025292 Ga0209676_1013647 Ga0209676_10136473 563
190 3300025294 Ga0209025_1000513 Ga0209025_100051349 563
191 3300025295 Ga0209564_1001343 Ga0209564_10013435 563
192 3300025297 Ga0209758_1000004 Ga0209758_10000041046 563
193 3300025298 Ga0209050_1000001 Ga0209050_10000013044 563
194 3300025298 Ga0209050_1000026 Ga0209050_1000026262 563
195 3300025298 Ga0209050_1002494 Ga0209050_10024948 563
196 3300025298 Ga0209050_1008218 Ga0209050_10082186 563
197 3300025299 Ga0209256_1000034 Ga0209256_1000034356 563
198 3300025303 Ga0209051_1000270 Ga0209051_100027058 563
199 3300025303 Ga0209051_1019950 Ga0209051_10199501 563
200 3300025304 Ga0209257_1000009 Ga0209257_1000009262 563
201 3300025304 Ga0209257_1005766 Ga0209257_10057662 563
202 3300025304 Ga0209257_1005772 Ga0209257_10057722 563
203 3300025909 Ga0207705_10000002 Ga0207705_100000021383 563
204 3300025919 Ga0207657_10000391 Ga0207657_1000039131 563
205 3300025981 Ga0207640_10036168 Ga0207640_100361683 563
206 3300026035 Ga0207703_10002565 Ga0207703_1000256510 563
207 3300026116 Ga0207674_10032877 Ga0207674_100328773 563
208 3300031911 Ga0307412_10000959 Ga0307412_100009594 563
209 3300039437 Ga0436365_0146431 Ga0436365_0146431_12265_14103 563
210 3300039453 Ga0436362_0077942 Ga0436362_0077942_30357_32195 563
211 3300041997 Ga0439431_0000613 Ga0439431_0000613_2989_4845 563
212 3300042004 Ga0439445_0003640 Ga0439445_0003640_683_2539 563
213 3300042006 Ga0439432_000368 Ga0439432_000368_11980_13836 563
214 3300042015 Ga0439462_0001072 Ga0439462_0001072_1084_2940 563
215 3300046460 Ga0495638_0007575 Ga0495638_0007575_3560_5434 563
216 3300046660 Ga0495625_0001479 Ga0495625_0001479_23248_25122 563
217 3300046691 Ga0495670_0000009 Ga0495670_0000009_187589_189475 563
218 3300046692 Ga0495671_0009947 Ga0495671_0009947_1151_3028 563
219 3300048911 Ga0496108_0018029 Ga0496108_0018029_2016_3896 563
220 3300048918 Ga0496115_0000597 Ga0496115_0000597_2429_4309 563
221 3300048924 Ga0496121_0000208 Ga0496121_0000208_720_2600 563
222 3300048926 Ga0496123_0043164 Ga0496123_0043164_1146_3041 563
223 3300048926 Ga0496123_0067922 Ga0496123_0067922_292_2187 563
224 3300048927 Ga0496124_0011225 Ga0496124_0011225_3627_5519 563
225 3300048927 Ga0496124_0031440 Ga0496124_0031440_2742_4637 563
226 3300048927 Ga0496124_0059549 Ga0496124_0059549_62_1957 563
227 3300048929 Ga0496126_0039775 Ga0496126_0039775_2384_4276 563
228 3300049587 Ga0501071_0050400 Ga0501071_0050400_462_2327 563
229 3300053087 Ga0500643_009975 Ga0500643_009975_92_1945 563
230 3300053094 Ga0500566_0007741 Ga0500566_0007741_2780_4663 563
231 3300053134 Ga0500658_0005053 Ga0500658_0005053_2162_4423 563
232 3300053134 Ga0500658_0008114 Ga0500658_0008114_719_2593 563
233 3300053139 Ga0500568_0022677 Ga0500568_0022677_16_1896 563
234 iso_pu_bacteria 2818991438 2819553932 563
235 3300005618 Ga0068864_100004572 Ga0068864_1000045727 564
236 3300005842 Ga0068858_100004671 Ga0068858_10000467114 564
237 3300006042 Ga0075368_10000762 Ga0075368_100007622 564
238 3300006178 Ga0075367_10010966 Ga0075367_100109662 564
239 3300006353 Ga0075370_10033794 Ga0075370_100337942 564
240 3300009177 Ga0105248_10032166 Ga0105248_100321662 564
241 3300025941 Ga0207711_10017656 Ga0207711_100176562 564
242 3300026035 Ga0207703_10001326 Ga0207703_1000132622 564
243 3300026095 Ga0207676_10007867 Ga0207676_100078672 564
244 3300027866 Ga0209813_10000071 Ga0209813_1000007124 564
245 3300031911 Ga0307412_10001229 Ga0307412_100012299 564
246 3300032004 Ga0307414_10082176 Ga0307414_100821762 564
247 3300033180 Ga0307510_10008197 Ga0307510_100081972 564
248 3300046557 Ga0495622_0013512 Ga0495622_0013512_836_2713 564
249 3300047445 Ga0495677_0006691 Ga0495677_0006691_805_2679 564
250 3300049663 Ga0501223_000048 Ga0501223_000048_15288_17189 564
251 3300049668 Ga0501233_000534 Ga0501233_000534_1716_3599 564
252 3300050494 nmdc:mga06z11_25_c1 nmdc:mga06z11_25_c1_3535_5424 564
253 3300053087 Ga0500643_012866 Ga0500643_012866_51_1925 564
254 3300053157 Ga0500624_000015 Ga0500624_000015_26115_28025 564
255 3300048924 Ga0496121_0000367 Ga0496121_0000367_87840_89714 565
256 3300006038 Ga0075365_10015842 Ga0075365_100158424 566
257 3300006042 Ga0075368_10000205 Ga0075368_1000020514 566
258 3300006177 Ga0075362_10005474 Ga0075362_100054742 566
259 3300006178 Ga0075367_10004836 Ga0075367_100048362 566
260 3300027866 Ga0209813_10000117 Ga0209813_1000011722 566
261 3300049823 Ga0501044_0015141 Ga0501044_0015141_4683_6521 566
262 3300050489 nmdc:mga03683_15224_c1 nmdc:mga03683_15224_c1_347_2227 566
263 3300050490 nmdc:mga03n38_977_c1 nmdc:mga03n38_977_c1_1448_3328 566
264 3300050494 nmdc:mga06z11_406_c1 nmdc:mga06z11_406_c1_12406_14286 566
265 3300050495 nmdc:mga04h51_2555_c1 nmdc:mga04h51_2555_c1_1863_3743 566
266 3300050496 nmdc:mga07m45_4_c1 nmdc:mga07m45_4_c1_259099_260979 566
267 3300005367 Ga0070667_100000198 Ga0070667_10000019861 567
268 3300005841 Ga0068863_100003687 Ga0068863_10000368711 567
269 3300006353 Ga0075370_10010873 Ga0075370_100108732 567
270 3300025298 Ga0209050_1002807 Ga0209050_10028072 567
271 3300026088 Ga0207641_10003709 Ga0207641_100037099 567
272 3300046500 Ga0495596_0007580 Ga0495596_0007580_670_2565 567
273 3300046512 Ga0495610_0027643 Ga0495610_0027643_537_2432 567
274 3300048919 Ga0496116_0000248 Ga0496116_0000248_1563_3452 567
275 3300048921 Ga0496118_0031376 Ga0496118_0031376_1175_3064 567
276 3300048926 Ga0496123_0002288 Ga0496123_0002288_3710_5599 567
277 3300048927 Ga0496124_0010029 Ga0496124_0010029_1831_3720 567
278 3300048928 Ga0496125_0007624 Ga0496125_0007624_1492_3381 567
279 3300048929 Ga0496126_0000097 Ga0496126_0000097_22020_23909 567
280 3300050491 nmdc:mga00v17_5943_c1 nmdc:mga00v17_5943_c1_1538_3367 567
281 3300050496 nmdc:mga07m45_10025_c1 nmdc:mga07m45_10025_c1_1481_3376 567
282 3300006058 Ga0075432_10000396 Ga0075432_1000039611 569
283 3300005563 Ga0068855_100072036 Ga0068855_1000720362 570
284 3300025949 Ga0207667_10062151 Ga0207667_100621512 570
285 3300002459 JGI24751J29686_10000337 JGI24751J29686_100003374 571
286 3300005330 Ga0070690_100068250 Ga0070690_1000682501 571
287 3300005335 Ga0070666_10011895 Ga0070666_100118955 571
288 3300005353 Ga0070669_100000844 Ga0070669_1000008447 571
289 3300005355 Ga0070671_100000054 Ga0070671_10000005474 571
290 3300005355 Ga0070671_100026458 Ga0070671_1000264582 571
291 3300005563 Ga0068855_100002646 Ga0068855_1000026462 571
292 3300005617 Ga0068859_100045715 Ga0068859_1000457152 571
293 3300005842 Ga0068858_100008863 Ga0068858_1000088632 571
294 3300005843 Ga0068860_100010788 Ga0068860_1000107887 571
295 3300006931 Ga0097620_100045715 Ga0097620_1000457152 571
296 3300025923 Ga0207681_10000232 Ga0207681_100002322 571
297 3300025931 Ga0207644_10000003 Ga0207644_10000003437 571
298 3300025931 Ga0207644_10019775 Ga0207644_100197752 571
299 3300025949 Ga0207667_10066324 Ga0207667_100663242 571
300 3300026035 Ga0207703_10008591 Ga0207703_100085912 571
301 3300048904 Ga0496101_0024896 Ga0496101_0024896_58_1938 571
302 3300048909 Ga0496106_0000284 Ga0496106_0000284_17526_19406 571
303 3300048910 Ga0496107_0007109 Ga0496107_0007109_2671_4551 571
304 3300048914 Ga0496111_0033460 Ga0496111_0033460_451_2319 571
305 3300048916 Ga0496113_0013818 Ga0496113_0013818_40_1920 571
306 3300048917 Ga0496114_0015588 Ga0496114_0015588_2316_4184 571

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04480

DUF559

Protein of unknown function (DUF559)

1

100

0.98

PF01807

zf-CHC2

CHC2 zinc finger

118

215

0.97

PF08275

DNAG_N

DNA primase catalytic core, N-terminal domain

237

361

0.95

PF01751

Toprim

Toprim domain

369

448

0.91

PF13155

Toprim_2

Toprim-like

371

459

0.9

PF13662

Toprim_4

Toprim domain

368

445

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vaz-assembly2.cif.gz_B crystal structure of a dna primase domain from pseudomonas aeruginosa 0.8806 111 404
5w33-assembly1.cif.gz_A crystal structure of the rna polymerase domain (rpd) of mycobacterium tuberculosis primase dnag 0.8437 111 404
5guj-assembly1.cif.gz_A crystal structure of the bacillus subtilis dnag rna polymerase domain, natural degradation of full length dnag 0.8349 111 407
5w34-assembly1.cif.gz_A crystal structure of the rna polymerase domain (rpd) of mycobacterium tuberculosis primase dnag in complex with double-stranded dna gaccggaagtgg 0.832 111 406
1eqn-assembly4.cif.gz_D e.coli primase catalytic core 0.8291 111 406
ID Description Score Start End Superfamily
2au3A03 Alpha Beta;3-Layer(aba) Sandwich;Dna Topoisomerase Vi A Subunit; Chain: A, domain 2; 0.9175 238 352 3.40.1360.10
5gujA01 Alpha Beta;Alpha-Beta Complex;DNA primase DNAg catalytic core, N-terminal domain;DNA primase, catalytic core, N-terminal domain 0.9 111 235 3.90.980.10
5w33A01 Alpha Beta;Alpha-Beta Complex;DNA primase DNAg catalytic core, N-terminal domain;DNA primase, catalytic core, N-terminal domain 0.8956 111 229 3.90.980.10
4e2kA01 Alpha Beta;Alpha-Beta Complex;DNA primase DNAg catalytic core, N-terminal domain;DNA primase, catalytic core, N-terminal domain 0.8898 111 236 3.90.980.10
5vazA02 Alpha Beta;3-Layer(aba) Sandwich;Dna Topoisomerase Vi A Subunit; Chain: A, domain 2; 0.877 238 354 3.40.1360.10
ID Description Score Start End GO Terms
AF-A0A2H0CZA1-F1-model_v4 DNA primase 0.9555 112 310 GO:0003896
GO:0005737
AF-A0A2H0CZA1-F1-model_v4 DNA primase 0.9193 112 310 GO:0003896
GO:0005737
AF-X1US04-F1-model_v4 Toprim domain-containing protein 0.9114 163 305 GO:0003896
GO:0005737
AF-A0A4Q6F3Z0-F1-model_v4 deleted 0.9097 128 413
AF-A0A1F8N8I7-F1-model_v4 DNA primase 0.8968 111 406 GO:0003896
GO:0005737

Feature Viewer

pLDDT pTM Quality
78.85 0.57 Medium
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Predicted Structure (AlphaFold2)

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