F398897

General Info

Members Datasets Scaffolds Average Seq Length
306 245 170 294

Family's Representative Sequence

Representative Sequence 3300049661|Ga0501217_000829|Ga0501217_000829_1833_2855
Length 340
Sequence LNAQLLKKEATVFIKNRNRSLLFEDGAREQRKIGWVIHMKKIRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIVEEAIESGIEDILIVTGKGKRAIEDHFDIAFELEHSLFEKGKLDILKEVRKSSAVEIHYIRQKEAKGLGHAVWCARNFIGNEPFAILLGDDIVQAEVPCTQQLIEQYEAVGHSVFGVQTVSHSETNRYGIVDPLEISGRLYKVRQLVEKPPIGQAPSNLAIMGRYVLTPEIFEFLDDQIVGAGGEIQLTDAIQRLNEKSGVYAYNFEGTRYDVGEKLGFILTTLEFALRNHELRNPLLSSMEEMLVRSRDNYLVSSRGEIK

Samples

Sample ID Description Type Environment
1 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
2 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
3 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
4 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
5 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
6 2554235283 Bacillus safensis VK Isolate Rhizosphere
7 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
8 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
9 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
10 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
11 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
12 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
13 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
14 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
15 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
16 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
17 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
18 2643221731 Bacillus sp. Root147 Isolate Unclassified
19 2643221735 Bacillus sp. Root920 Isolate Unclassified
20 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
21 2671180694 Paenibacillus sp. A3 Isolate Unclassified
22 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
23 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
24 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
25 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
26 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
27 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
28 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
29 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
30 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
31 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
32 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
33 2811994870 Bacillus sp. JB4 Isolate Unclassified
34 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
35 2818991459 Paenibacillus sp. 597 Isolate Unclassified
36 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
37 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
38 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
39 2842882022 Bacillus sp. R-71893 Isolate Unclassified
40 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
41 2857472729 Cohnella sp. R-74144 Isolate Unclassified
42 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
43 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
44 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
45 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
46 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
47 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
48 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
49 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
50 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
51 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
52 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
53 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
54 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
55 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
56 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
57 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
58 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
59 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
60 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
61 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
62 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
63 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
64 2919720352 Priestia megaterium 4340 Isolate Unclassified
65 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
66 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
67 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
68 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
69 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
70 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
71 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
72 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
73 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
74 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
75 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
76 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
77 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
78 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
79 2969141011 Bacillus velezensis MH25 Isolate Unclassified
80 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
81 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
82 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
83 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
84 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
85 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
86 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
87 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
88 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
89 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
90 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
91 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
92 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
93 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
94 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
95 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
96 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
97 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
98 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
99 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
100 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
101 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
102 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
103 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
104 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
105 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
106 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
107 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
108 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
109 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
110 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
111 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
112 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
113 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
114 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
115 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
116 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
117 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
118 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
119 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
120 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
121 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
122 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
123 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
124 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
125 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
126 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
127 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
128 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
129 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
130 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
131 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
132 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
133 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
134 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
135 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
136 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
139 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
140 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
141 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
142 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
143 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
160 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
164 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
165 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
166 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
167 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
168 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
169 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
170 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
171 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
172 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
173 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
174 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
175 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
176 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
177 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
178 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
179 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
180 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
181 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
182 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
183 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
184 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
185 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
186 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
187 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
188 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
189 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
190 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
191 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
192 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
193 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
194 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
195 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
196 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
197 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
198 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
199 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
200 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
201 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
202 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
203 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
204 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
205 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
206 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
207 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
208 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
209 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
210 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
211 3300049133 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
212 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
213 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
214 3300049550 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
215 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
216 3300049552 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
217 3300049554 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_A_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
218 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
219 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
220 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
221 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
222 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
223 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
224 3300059503 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 21R_SD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
225 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
226 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
227 3300059644 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 38R_AD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
228 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
229 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
230 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
231 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
232 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
233 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
234 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
235 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
236 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
237 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
238 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
239 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
240 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
241 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
242 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
243 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere
244 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
245 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 51.63
Metatranscriptomes 5.56
Isolates 42.81

Biome Distribution

Category Percentage (%)
Aerial Root 0.65
Bulb 0
Endosphere 10.46
Nodule 0.33
Rhizoplane 1.96
Rhizosphere 62.75
Stem 0
Stem Tuber 0
Unclassified 23.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10001322 3300003187 Bacteria 17334
2 JGI25151J46595_10009507 3300003187 Bacteria 4595
3 JGI25151J46595_10049362 3300003187 Bacteria 1444
4 Ga0055532_1000024 3300003758 Bacteria 244166
5 Ga0055541_1000153 3300003841 Bacteria 34054
6 Ga0055541_1001262 3300003841 Bacteria 5578
7 Ga0055541_1001379 3300003841 Bacteria 5277
8 Ga0065704_10273375 3300005289 Bacteria 938
9 Ga0070680_100064020 3300005336 Unclassified 3013
10 Ga0070668_100394644 3300005347 Bacteria 1180
11 Ga0070659_100260075 3300005366 Bacteria 1440
12 Ga0070703_10034543 3300005406 Bacteria 1544
13 Ga0070701_10040037 3300005438 Bacteria 2380
14 Ga0070700_100010338 3300005441 Bacteria 5151
15 Ga0068867_100026153 3300005459 Bacteria 4188
16 Ga0070679_100151618 3300005530 Bacteria 2294
17 Ga0070679_100174333 3300005530 Bacteria 2123
18 Ga0070686_100149174 3300005544 Bacteria 1636
19 Ga0070695_100019126 3300005545 Bacteria 4166
20 Ga0068859_100130533 3300005617 Bacteria 2584
21 Ga0068859_100153376 3300005617 Bacteria 2380
22 Ga0068858_100000752 3300005842 Bacteria 33948
23 Ga0068860_100411799 3300005843 Bacteria 1339
24 Ga0068862_100070295 3300005844 Bacteria 3022
25 Ga0081455_10001566 3300005937 Bacteria 28076
26 Ga0075431_100001029 3300006847 Bacteria 24860
27 Ga0097620_100130533 3300006931 Bacteria 2584
28 Ga0097620_100153372 3300006931 Bacteria 2380
29 Ga0105244_10015658 3300009036 Bacteria 4343
30 Ga0105244_10019514 3300009036 Bacteria 3782
31 Ga0105244_10028146 3300009036 Bacteria 3018
32 Ga0105244_10029567 3300009036 Bacteria 2926
33 Ga0105250_10061423 3300009092 Bacteria 1511
34 Ga0111539_10147634 3300009094 Bacteria 2753
35 Ga0105243_10058688 3300009148 Bacteria 3067
36 Ga0105242_10004608 3300009176 Bacteria 10687
37 Ga0105248_10000860 3300009177 Bacteria 34163
38 Ga0105246_10013626 3300011119 Bacteria 5100
39 Ga0157370_10163584 3300013104 Bacteria 2070
40 Ga0157369_10314908 3300013105 Bacteria 1627
41 Ga0157374_10229405 3300013296 Bacteria 1824
42 Ga0163162_11048214 3300013306 Bacteria 923
43 Ga0157372_10684038 3300013307 Bacteria 1194
44 Ga0163163_10036865 3300014325 Bacteria 4752
45 Ga0157379_10000430 3300014968 Bacteria 33909
46 Ga0206351_10428804 3300020077 Bacteria 1265
47 Ga0206351_10958492 3300020077 Bacteria 1077
48 Ga0213872_10001391 3300021361 Bacteria 15936
49 Ga0213872_10023217 3300021361 Bacteria 2854
50 Ga0224712_10022303 3300022467 Bacteria 2180
51 Ga0209566_100059 3300025225 Bacteria 199785
52 Ga0209566_100142 3300025225 Bacteria 86059
53 Ga0209566_100228 3300025225 Bacteria 54872
54 Ga0209566_100304 3300025225 Bacteria 44584
55 Ga0209566_100448 3300025225 Bacteria 30404
56 Ga0209566_100791 3300025225 Bacteria 16691
57 Ga0209147_100020 3300025229 Bacteria 474055
58 Ga0209437_100803 3300025233 Bacteria 14373
59 Ga0209258_100723 3300025242 Bacteria 22046
60 Ga0209675_1002008 3300025291 Bacteria 10906
61 Ga0209675_1006282 3300025291 Bacteria 4798
62 Ga0209025_1001323 3300025294 Bacteria 33574
63 Ga0209025_1002722 3300025294 Bacteria 17941
64 Ga0209025_1006025 3300025294 Bacteria 9611
65 Ga0209025_1007235 3300025294 Bacteria 8349
66 Ga0209025_1012264 3300025294 Bacteria 5520
67 Ga0209025_1016937 3300025294 Bacteria 4249
68 Ga0209025_1035171 3300025294 Bacteria 2269
69 Ga0207426_1023985 3300025302 Bacteria 2075
70 Ga0207655_1028863 3300025728 Bacteria 2608
71 Ga0207653_10002159 3300025885 Bacteria 6260
72 Ga0207705_10191765 3300025909 Bacteria 1546
73 Ga0207684_10213771 3300025910 Bacteria 1663
74 Ga0207654_10081754 3300025911 Bacteria 1946
75 Ga0207660_10057460 3300025917 Bacteria 2787
76 Ga0207652_10157411 3300025921 Unclassified 2035
77 Ga0207690_10271278 3300025932 Bacteria 1318
78 Ga0207686_10026681 3300025934 Bacteria 3373
79 Ga0207709_10016206 3300025935 Bacteria 4142
80 Ga0207704_10199180 3300025938 Bacteria 1464
81 Ga0207711_10000675 3300025941 Bacteria 33918
82 Ga0207689_10088735 3300025942 Bacteria 2540
83 Ga0207712_10133473 3300025961 Bacteria 1895
84 Ga0207703_10000676 3300026035 Bacteria 33962
85 Ga0207708_10106031 3300026075 Bacteria 2179
86 Ga0207648_10047615 3300026089 Bacteria 3757
87 Ga0207674_10005325 3300026116 Bacteria 15308
88 Ga0268265_10233531 3300028380 Bacteria 1618
89 Ga0268264_10641876 3300028381 Bacteria 1050
90 Ga0265319_1011839 3300028563 Bacteria 3551
91 Ga0265318_10029429 3300028577 Bacteria 2142
92 Ga0265322_10007215 3300028654 Bacteria 3254
93 Ga0265338_10072370 3300028800 Bacteria 2943
94 Ga0268256_1009254 3300030500 Bacteria 3294
95 Ga0265320_10009416 3300031240 Bacteria 5895
96 Ga0265320_10069432 3300031240 Bacteria 1663
97 Ga0265325_10062702 3300031241 Bacteria 1882
98 Ga0265329_10044393 3300031242 Bacteria 1421
99 Ga0265340_10003340 3300031247 Bacteria 9090
100 Ga0265339_10018698 3300031249 Bacteria 4082
101 Ga0265339_10027319 3300031249 Bacteria 3258
102 Ga0265331_10006659 3300031250 Bacteria 6789
103 Ga0265316_10019395 3300031344 Bacteria 5819
104 Ga0265316_10033658 3300031344 Bacteria 4171
105 Ga0265314_10014556 3300031711 Bacteria 6284
106 Ga0307409_100026937 3300031995 Bacteria 4064
107 Ga0307416_100014234 3300032002 Bacteria 5441
108 Ga0373955_0150231 3300035172 Bacteria 1371
109 Ga0373927_0076179 3300035695 Bacteria 2173
110 Ga0373933_0198783 3300035724 Bacteria 1282
111 Ga0373937_0150318 3300036401 Bacteria 2181
112 Ga0373925_0007458 3300037068 Bacteria 7977
113 Ga0395900_0096960 3300037418 Bacteria 3030
114 Ga0395898_0034933 3300037466 Bacteria 5003
115 Ga0400483_012875 3300039062 Bacteria 6033
116 Ga0436361_0267704 3300039447 Bacteria 23699
117 Ga0436361_0518279 3300039447 Bacteria 8252
118 Ga0439439_0000269 3300041406 Bacteria 8158
119 Ga0439449_0000892 3300042007 Bacteria 11644
120 Ga0439462_0000223 3300042015 Bacteria 10051
121 Ga0466969_0013501 3300044656 Bacteria 4302
122 Ga0453683_0098950 3300044673 Unclassified 1831
123 Ga0453684_0000336 3300044712 Bacteria 195674
124 Ga0453684_0068903 3300044712 Bacteria 4490
125 Ga0453684_0078061 3300044712 Bacteria 4146
126 Ga0466968_0010391 3300044735 Bacteria 3607
127 Ga0466959_0048223 3300045049 Bacteria 3130
128 Ga0451576_0001061 3300045051 Bacteria 50653
129 Ga0451576_0023155 3300045051 Bacteria 6731
130 Ga0495627_053402 3300046453 Bacteria 1210
131 Ga0495590_0062774 3300046457 Bacteria 1300
132 Ga0495637_0037551 3300046520 Bacteria 2102
133 Ga0495660_0030540 3300046810 Bacteria 3035
134 Ga0496102_0503210 3300048905 Bacteria 1134
135 Ga0496110_0123478 3300048913 Bacteria 2335
136 Ga0496116_0004279 3300048919 Bacteria 13690
137 Ga0496116_0009690 3300048919 Bacteria 8187
138 Ga0496116_0060880 3300048919 Bacteria 2447
139 Ga0496116_0082296 3300048919 Bacteria 1992
140 Ga0496118_0019622 3300048921 Bacteria 6034
141 Ga0496120_0030674 3300048923 Bacteria 3263
142 Ga0496121_0346984 3300048924 Bacteria 990
143 Ga0496122_0032172 3300048925 Bacteria 4343
144 Ga0496122_0038496 3300048925 Bacteria 3831
145 Ga0496122_0039592 3300048925 Bacteria 3757
146 Ga0496122_0071438 3300048925 Bacteria 2474
147 Ga0496124_0029209 3300048927 Bacteria 4918
148 Ga0496125_0002101 3300048928 Bacteria 26744
149 Ga0496125_0021738 3300048928 Bacteria 5972
150 Ga0501306_000276 3300049127 Bacteria 3635
151 Ga0501343_000031 3300049132 Bacteria 5541
152 Ga0501344_00091 3300049133 Bacteria 2843
153 Ga0501290_010344 3300049513 Bacteria 1192
154 Ga0501315_000932 3300049531 Bacteria 2288
155 Ga0501334_04322 3300049550 Bacteria 909
156 Ga0501335_000778 3300049551 Bacteria 2216
157 Ga0501336_000563 3300049552 Bacteria 1903
158 Ga0501338_00294 3300049554 Bacteria 2140
159 Ga0501217_000829 3300049661 Bacteria 5430
160 Ga0501233_038252 3300049668 Bacteria 1117
161 Ga0501045_0083932 3300049824 Bacteria 2350
162 Ga0501212_009303 3300049851 Bacteria 1381
163 nmdc:mga06r32_81_c1 3300050510 Bacteria 64375
164 Ga0500616_0054297 3300053153 Bacteria 2099
165 Ga0587080_000219 3300059503 Bacteria 4147
166 Ga0587082_000853 3300059504 Bacteria 2875
167 Ga0587083_0001042 3300059505 Bacteria 2918
168 Ga0587075_000101 3300059644 Bacteria 4566
169 Ga0587076_000018 3300059645 Bacteria 8360
170 Ga0587079_000001 3300059647 Bacteria 13426

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049550 Ga0501334_04322 Ga0501334_04322_41_817 252
2 3300046457 Ga0495590_0062774 Ga0495590_0062774_42_878 266
3 3300049668 Ga0501233_038252 Ga0501233_038252_250_1086 266
4 3300005530 Ga0070679_100174333 Ga0070679_1001743332 267
5 3300013307 Ga0157372_10684038 Ga0157372_106840382 274
6 3300009177 Ga0105248_10000860 Ga0105248_1000086022 281
7 3300014325 Ga0163163_10036865 Ga0163163_100368654 281
8 3300014968 Ga0157379_10000430 Ga0157379_1000043013 281
9 3300035172 Ga0373955_0150231 Ga0373955_0150231_226_1104 282
10 3300035724 Ga0373933_0198783 Ga0373933_0198783_208_1086 282
11 3300036401 Ga0373937_0150318 Ga0373937_0150318_180_1058 282
12 iso_pu_bacteria 2671180694 2673819911 282
13 iso_pu_bacteria 8007375930 8007379946 282
14 iso_pu_bacteria 8002317523 8002323489 283
15 iso_pu_bacteria 8046991243 8046997281 283
16 iso_pu_bacteria 2554235283 2555471032 285
17 iso_pu_bacteria 2643221735 2644740271 285
18 iso_pu_bacteria 2687453109 2687498368 285
19 iso_pu_bacteria 2811994870 2812316252 285
20 iso_pu_bacteria 2818991468 2819725008 285
21 iso_pu_bacteria 2823526263 2823528222 285
22 iso_pu_bacteria 2919160200 2919161405 285
23 3300021361 Ga0213872_10001391 Ga0213872_100013918 286
24 3300039447 Ga0436361_0267704 Ga0436361_0267704_21533_22408 286
25 iso_pu_bacteria 2512564039 2512735812 286
26 iso_pu_bacteria 2524023129 2524187523 286
27 iso_pu_bacteria 2524023129 2524188781 286
28 iso_pu_bacteria 2548877040 2550905426 286
29 iso_pu_bacteria 2571042143 2571528332 286
30 iso_pu_bacteria 2576861424 2578335492 286
31 iso_pu_bacteria 2585428059 2587738422 286
32 iso_pu_bacteria 2585428059 2587741785 286
33 iso_pu_bacteria 2593339131 2595090111 286
34 iso_pu_bacteria 2593339131 2595090142 286
35 iso_pu_bacteria 2600255286 2601639884 286
36 iso_pu_bacteria 2600255286 2601639905 286
37 iso_pu_bacteria 2643221543 2643737132 286
38 iso_pu_bacteria 2643221676 2644427065 286
39 iso_pu_bacteria 2643221731 2644719633 286
40 iso_pu_bacteria 2643221731 2644719651 286
41 iso_pu_bacteria 2728368933 2728531766 286
42 iso_pu_bacteria 2757320391 2757567537 286
43 iso_pu_bacteria 2757320391 2757567556 286
44 iso_pu_bacteria 2775507177 2777760883 286
45 iso_pu_bacteria 2775507177 2777760898 286
46 iso_pu_bacteria 2775507192 2777835926 286
47 iso_pu_bacteria 2816332295 2817479418 286
48 iso_pu_bacteria 2818991459 2819669712 286
49 iso_pu_bacteria 2821111986 2821115724 286
50 iso_pu_bacteria 2842882022 2842885628 286
51 iso_pu_bacteria 2857472729 2857475585 286
52 iso_pu_bacteria 2864733723 2864738607 286
53 iso_pu_bacteria 2865002811 2865007331 286
54 iso_pu_bacteria 2881636855 2881638186 286
55 iso_pu_bacteria 2885526491 2885531262 286
56 iso_pu_bacteria 2889042446 2889043828 286
57 iso_pu_bacteria 2904113452 2904118912 286
58 iso_pu_bacteria 2904162308 2904166472 286
59 iso_pu_bacteria 2904490793 2904494977 286
60 iso_pu_bacteria 2904524088 2904528037 286
61 iso_pu_bacteria 2904560550 2904561259 286
62 iso_pu_bacteria 2904755435 2904760780 286
63 iso_pu_bacteria 2907202186 2907203969 286
64 iso_pu_bacteria 2919160200 2919163801 286
65 iso_pu_bacteria 2919425241 2919428488 286
66 iso_pu_bacteria 2919517244 2919521150 286
67 iso_pu_bacteria 2919720352 2919724130 286
68 iso_pu_bacteria 2919720352 2919724143 286
69 iso_pu_bacteria 2928510474 2928511125 286
70 iso_pu_bacteria 2929206907 2929207558 286
71 iso_pu_bacteria 2931384279 2931387291 286
72 iso_pu_bacteria 2936340661 2936345552 286
73 iso_pu_bacteria 2938649242 2938654341 286
74 iso_pu_bacteria 2960319331 2960322284 286
75 iso_pu_bacteria 2968558590 2968561539 286
76 iso_pu_bacteria 2969765954 2969766840 286
77 iso_pu_bacteria 2971403814 2971403982 286
78 iso_pu_bacteria 2979083700 2979088923 286
79 iso_pu_bacteria 2980182181 2980186942 286
80 iso_pu_bacteria 2984527788 2984532485 286
81 iso_pu_bacteria 2984532647 2984533742 286
82 iso_pu_bacteria 2988225383 2988229074 286
83 iso_pu_bacteria 2996632988 2996633160 286
84 iso_pu_bacteria 3006858327 3006859748 286
85 iso_pu_bacteria 8002317523 8002321212 286
86 iso_pu_bacteria 8002317523 8002323780 286
87 iso_pu_bacteria 8022893055 8022893979 286
88 iso_pu_bacteria 8022893055 8022893992 286
89 iso_pu_bacteria 8046991243 8046991527 286
90 iso_pu_bacteria 8046991243 8046995378 286
91 iso_pu_bacteria 8054465665 8054466345 286
92 iso_pu_bacteria 8054795415 8054802649 286
93 iso_pu_bacteria 8057473075 8057473331 286
94 3300005406 Ga0070703_10034543 Ga0070703_100345432 287
95 3300005441 Ga0070700_100010338 Ga0070700_1000103382 287
96 3300005459 Ga0068867_100026153 Ga0068867_1000261533 287
97 3300005545 Ga0070695_100019126 Ga0070695_1000191262 287
98 3300005617 Ga0068859_100153376 Ga0068859_1001533762 287
99 3300005843 Ga0068860_100411799 Ga0068860_1004117992 287
100 3300005844 Ga0068862_100070295 Ga0068862_1000702953 287
101 3300006931 Ga0097620_100153372 Ga0097620_1001533722 287
102 3300009148 Ga0105243_10058688 Ga0105243_100586882 287
103 3300009176 Ga0105242_10004608 Ga0105242_100046083 287
104 3300025225 Ga0209566_100791 Ga0209566_1007919 287
105 3300025885 Ga0207653_10002159 Ga0207653_100021593 287
106 3300025910 Ga0207684_10213771 Ga0207684_102137712 287
107 3300025911 Ga0207654_10081754 Ga0207654_100817541 287
108 3300025917 Ga0207660_10057460 Ga0207660_100574602 287
109 3300025934 Ga0207686_10026681 Ga0207686_100266812 287
110 3300025935 Ga0207709_10016206 Ga0207709_100162063 287
111 3300025938 Ga0207704_10199180 Ga0207704_101991802 287
112 3300025942 Ga0207689_10088735 Ga0207689_100887352 287
113 3300026075 Ga0207708_10106031 Ga0207708_101060312 287
114 3300026089 Ga0207648_10047615 Ga0207648_100476152 287
115 3300026116 Ga0207674_10005325 Ga0207674_100053258 287
116 3300028380 Ga0268265_10233531 Ga0268265_102335312 287
117 3300028563 Ga0265319_1011839 Ga0265319_10118392 287
118 3300028577 Ga0265318_10029429 Ga0265318_100294292 287
119 3300028654 Ga0265322_10007215 Ga0265322_100072153 287
120 3300028800 Ga0265338_10072370 Ga0265338_100723702 287
121 3300031240 Ga0265320_10009416 Ga0265320_100094164 287
122 3300031240 Ga0265320_10069432 Ga0265320_100694322 287
123 3300031241 Ga0265325_10062702 Ga0265325_100627022 287
124 3300031242 Ga0265329_10044393 Ga0265329_100443932 287
125 3300031247 Ga0265340_10003340 Ga0265340_100033404 287
126 3300031249 Ga0265339_10018698 Ga0265339_100186986 287
127 3300031249 Ga0265339_10027319 Ga0265339_100273193 287
128 3300031250 Ga0265331_10006659 Ga0265331_100066593 287
129 3300031344 Ga0265316_10019395 Ga0265316_100193954 287
130 3300031711 Ga0265314_10014556 Ga0265314_100145564 287
131 3300049824 Ga0501045_0083932 Ga0501045_0083932_255_1133 287
132 iso_pu_bacteria 2511231119 2511699734 287
133 iso_pu_bacteria 2545555800 2545555812 287
134 iso_pu_bacteria 2571042588 2573036677 287
135 iso_pu_bacteria 2576861599 2578929229 287
136 iso_pu_bacteria 2579778775 2580933420 287
137 iso_pu_bacteria 2585428059 2587743053 287
138 iso_pu_bacteria 2619619294 2621273720 287
139 iso_pu_bacteria 2648501850 2651533154 287
140 iso_pu_bacteria 2671180844 2674419418 287
141 iso_pu_bacteria 2695420354 2695627694 287
142 iso_pu_bacteria 2721755693 2723602705 287
143 iso_pu_bacteria 2728369359 2730138680 287
144 iso_pu_bacteria 2751185905 2753809410 287
145 iso_pu_bacteria 2802428803 2802438969 287
146 iso_pu_bacteria 2857453340 2857455447 287
147 iso_pu_bacteria 2877768649 2877770537 287
148 iso_pu_bacteria 2880169592 2880171522 287
149 iso_pu_bacteria 2889276214 2889278662 287
150 iso_pu_bacteria 2897109615 2897111542 287
151 iso_pu_bacteria 2904595352 2904598731 287
152 iso_pu_bacteria 2919414237 2919419005 287
153 iso_pu_bacteria 2939702853 2939703849 287
154 iso_pu_bacteria 2956897341 2956899963 287
155 iso_pu_bacteria 2962290636 2962292851 287
156 iso_pu_bacteria 2969136845 2969138793 287
157 iso_pu_bacteria 2969141011 2969142992 287
158 iso_pu_bacteria 2969770375 2969772589 287
159 iso_pu_bacteria 2971410472 2971414704 287
160 iso_pu_bacteria 2971511577 2971513229 287
161 iso_pu_bacteria 2980176882 2980178566 287
162 iso_pu_bacteria 2980492589 2980494595 287
163 iso_pu_bacteria 2990275345 2990276204 287
164 iso_pu_bacteria 2996706504 2996711704 287
165 iso_pu_bacteria 3001892409 3001894573 287
166 iso_pu_bacteria 3001892409 3001895032 287
167 iso_pu_bacteria 3006988479 3006990932 287
168 iso_pu_bacteria 648028048 648169050 287
169 iso_pu_bacteria 8022630665 8022631147 287
170 iso_pu_bacteria 8051952484 8051952525 287
171 iso_pu_bacteria 8052174270 8052174933 287
172 iso_pu_bacteria 8054280661 8054284751 287
173 iso_pu_bacteria 8056533031 8056533339 287
174 iso_pu_bacteria 8057632132 8057636405 287
175 3300005438 Ga0070701_10040037 Ga0070701_100400372 288
176 3300005544 Ga0070686_100149174 Ga0070686_1001491742 288
177 3300005617 Ga0068859_100130533 Ga0068859_1001305332 288
178 3300006931 Ga0097620_100130533 Ga0097620_1001305332 288
179 3300013306 Ga0163162_11048214 Ga0163162_110482141 288
180 3300020077 Ga0206351_10428804 Ga0206351_104288042 288
181 3300020077 Ga0206351_10958492 Ga0206351_109584921 288
182 3300035695 Ga0373927_0076179 Ga0373927_0076179_791_1672 288
183 3300037068 Ga0373925_0007458 Ga0373925_0007458_6964_7845 288
184 3300044673 Ga0453683_0098950 Ga0453683_0098950_844_1716 288
185 3300044712 Ga0453684_0000336 Ga0453684_0000336_49588_50469 288
186 3300044712 Ga0453684_0068903 Ga0453684_0068903_2255_3121 288
187 3300053153 Ga0500616_0054297 Ga0500616_0054297_876_1757 288
188 iso_pu_bacteria 2857609550 2857610179 288
189 iso_pu_bacteria 2865002811 2865007496 288
190 3300005336 Ga0070680_100064020 Ga0070680_1000640202 289
191 3300005366 Ga0070659_100260075 Ga0070659_1002600752 289
192 3300005530 Ga0070679_100151618 Ga0070679_1001516181 289
193 3300006847 Ga0075431_100001029 Ga0075431_10000102912 289
194 3300009094 Ga0111539_10147634 Ga0111539_101476342 289
195 3300013104 Ga0157370_10163584 Ga0157370_101635842 289
196 3300013105 Ga0157369_10314908 Ga0157369_103149082 289
197 3300021361 Ga0213872_10023217 Ga0213872_100232173 289
198 3300022467 Ga0224712_10022303 Ga0224712_100223032 289
199 3300025909 Ga0207705_10191765 Ga0207705_101917652 289
200 3300025921 Ga0207652_10157411 Ga0207652_101574111 289
201 3300025932 Ga0207690_10271278 Ga0207690_102712782 289
202 3300031344 Ga0265316_10033658 Ga0265316_100336581 289
203 3300031995 Ga0307409_100026937 Ga0307409_1000269372 289
204 3300032002 Ga0307416_100014234 Ga0307416_1000142343 289
205 3300037466 Ga0395898_0034933 Ga0395898_0034933_2212_3093 289
206 3300039447 Ga0436361_0518279 Ga0436361_0518279_934_1809 289
207 3300049132 Ga0501343_000031 Ga0501343_000031_2823_3692 289
208 3300049133 Ga0501344_00091 Ga0501344_00091_755_1624 289
209 3300049513 Ga0501290_010344 Ga0501290_010344_147_1016 289
210 3300049531 Ga0501315_000932 Ga0501315_000932_357_1226 289
211 3300049551 Ga0501335_000778 Ga0501335_000778_53_922 289
212 3300049552 Ga0501336_000563 Ga0501336_000563_170_1039 289
213 3300049554 Ga0501338_00294 Ga0501338_00294_52_921 289
214 3300049851 Ga0501212_009303 Ga0501212_009303_50_919 289
215 3300050510 nmdc:mga06r32_81_c1 nmdc:mga06r32_81_c1_59371_60240 289
216 iso_pu_bacteria 8057977335 8057978157 289
217 3300003187 JGI25151J46595_10001322 JGI25151J46595_100013227 290
218 3300003758 Ga0055532_1000024 Ga0055532_1000024144 290
219 3300003758 Ga0055532_1000024 Ga0055532_1000024168 290
220 3300003841 Ga0055541_1001379 Ga0055541_10013795 290
221 3300005289 Ga0065704_10273375 Ga0065704_102733751 290
222 3300005347 Ga0070668_100394644 Ga0070668_1003946441 290
223 3300009036 Ga0105244_10015658 Ga0105244_100156585 290
224 3300009036 Ga0105244_10019514 Ga0105244_100195141 290
225 3300009092 Ga0105250_10061423 Ga0105250_100614232 290
226 3300011119 Ga0105246_10013626 Ga0105246_100136264 290
227 3300013296 Ga0157374_10229405 Ga0157374_102294052 290
228 3300025225 Ga0209566_100304 Ga0209566_1003048 290
229 3300025229 Ga0209147_100020 Ga0209147_100020199 290
230 3300025229 Ga0209147_100020 Ga0209147_100020222 290
231 3300025233 Ga0209437_100803 Ga0209437_10080310 290
232 3300025242 Ga0209258_100723 Ga0209258_10072314 290
233 3300025291 Ga0209675_1002008 Ga0209675_100200811 290
234 3300025291 Ga0209675_1006282 Ga0209675_10062824 290
235 3300025294 Ga0209025_1001323 Ga0209025_10013239 290
236 3300025294 Ga0209025_1006025 Ga0209025_10060255 290
237 3300025294 Ga0209025_1007235 Ga0209025_10072354 290
238 3300025294 Ga0209025_1012264 Ga0209025_10122642 290
239 3300025294 Ga0209025_1016937 Ga0209025_10169372 290
240 3300025302 Ga0207426_1023985 Ga0207426_10239852 290
241 3300025728 Ga0207655_1028863 Ga0207655_10288631 290
242 3300025961 Ga0207712_10133473 Ga0207712_101334732 290
243 3300028381 Ga0268264_10641876 Ga0268264_106418762 290
244 3300030500 Ga0268256_1009254 Ga0268256_10092542 290
245 3300037418 Ga0395900_0096960 Ga0395900_0096960_1987_2868 290
246 3300041406 Ga0439439_0000269 Ga0439439_0000269_2875_3780 290
247 3300042007 Ga0439449_0000892 Ga0439449_0000892_7293_8198 290
248 3300042015 Ga0439462_0000223 Ga0439462_0000223_7952_8857 290
249 3300044656 Ga0466969_0013501 Ga0466969_0013501_1347_2249 290
250 3300044712 Ga0453684_0078061 Ga0453684_0078061_1261_2163 290
251 3300044735 Ga0466968_0010391 Ga0466968_0010391_1908_2810 290
252 3300045049 Ga0466959_0048223 Ga0466959_0048223_534_1436 290
253 3300046453 Ga0495627_053402 Ga0495627_053402_285_1175 290
254 3300046520 Ga0495637_0037551 Ga0495637_0037551_23_913 290
255 3300046810 Ga0495660_0030540 Ga0495660_0030540_853_1743 290
256 3300048905 Ga0496102_0503210 Ga0496102_0503210_164_1045 290
257 3300048913 Ga0496110_0123478 Ga0496110_0123478_1139_2020 290
258 3300048919 Ga0496116_0004279 Ga0496116_0004279_6518_7426 290
259 3300048919 Ga0496116_0060880 Ga0496116_0060880_242_1144 290
260 3300048919 Ga0496116_0082296 Ga0496116_0082296_384_1271 290
261 3300048924 Ga0496121_0346984 Ga0496121_0346984_15_902 290
262 3300048925 Ga0496122_0032172 Ga0496122_0032172_1425_2330 290
263 3300048925 Ga0496122_0038496 Ga0496122_0038496_1082_1975 290
264 3300048927 Ga0496124_0029209 Ga0496124_0029209_2418_3326 290
265 3300049127 Ga0501306_000276 Ga0501306_000276_34_942 290
266 3300003187 JGI25151J46595_10009507 JGI25151J46595_100095073 291
267 3300003187 JGI25151J46595_10049362 JGI25151J46595_100493621 291
268 3300003841 Ga0055541_1001262 Ga0055541_10012625 291
269 3300025225 Ga0209566_100059 Ga0209566_100059116 291
270 3300025225 Ga0209566_100142 Ga0209566_10014283 291
271 3300025294 Ga0209025_1002722 Ga0209025_10027223 291
272 3300025294 Ga0209025_1035171 Ga0209025_10351712 291
273 3300045051 Ga0451576_0001061 Ga0451576_0001061_3018_3908 291
274 3300045051 Ga0451576_0023155 Ga0451576_0023155_936_1826 291
275 iso_pu_bacteria 2936340661 2936345588 291
276 3300005842 Ga0068858_100000752 Ga0068858_10000075226 292
277 3300005937 Ga0081455_10001566 Ga0081455_100015665 292
278 3300025941 Ga0207711_10000675 Ga0207711_1000067513 292
279 3300026035 Ga0207703_10000676 Ga0207703_1000067622 292
280 3300059503 Ga0587080_000219 Ga0587080_000219_3143_4057 293
281 3300059504 Ga0587082_000853 Ga0587082_000853_1404_2318 293
282 3300059505 Ga0587083_0001042 Ga0587083_0001042_587_1501 293
283 3300059644 Ga0587075_000101 Ga0587075_000101_30_944 293
284 3300059645 Ga0587076_000018 Ga0587076_000018_61_975 293
285 3300059647 Ga0587079_000001 Ga0587079_000001_11868_12782 293
286 3300048919 Ga0496116_0009690 Ga0496116_0009690_4712_5614 294
287 3300048921 Ga0496118_0019622 Ga0496118_0019622_4692_5594 294
288 3300048923 Ga0496120_0030674 Ga0496120_0030674_1617_2519 294
289 3300048925 Ga0496122_0039592 Ga0496122_0039592_503_1405 294
290 3300048928 Ga0496125_0002101 Ga0496125_0002101_11089_11991 294
291 3300048925 Ga0496122_0071438 Ga0496122_0071438_979_1878 295
292 3300009036 Ga0105244_10029567 Ga0105244_100295671 296
293 3300048928 Ga0496125_0021738 Ga0496125_0021738_1827_2753 296
294 3300009036 Ga0105244_10028146 Ga0105244_100281463 299
295 iso_pu_bacteria 2945991243 2945994130 299
296 iso_pu_bacteria 2946053406 2946056891 299
297 3300039062 Ga0400483_012875 Ga0400483_012875_2307_3245 302
298 3300003841 Ga0055541_1000153 Ga0055541_10001532 303
299 iso_pu_bacteria 2939679117 2939683547 303
300 iso_pu_bacteria 8057733483 8057735217 303
301 3300025225 Ga0209566_100448 Ga0209566_1004482 304
302 3300025294 Ga0209025_1001323 Ga0209025_10013236 304
303 3300049661 Ga0501217_000829 Ga0501217_000829_1833_2855 309
304 3300025225 Ga0209566_100228 Ga0209566_10022828 314
305 3300003187 JGI25151J46595_10001322 JGI25151J46595_100013223 315
306 3300025242 Ga0209258_100723 Ga0209258_10072317 315

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00483

NTP_transferase

Nucleotidyl transferase

44

304

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5i1f-assembly1.cif.gz_A-2 crystal structure of utp-glucose-1-phosphate uridylyltransferase from burkholderia vietnamiensis in complex with uridine-5'-diphosphate-glucose 0.9551 25 310
3juj-assembly1.cif.gz_D the crystal structure of apo- udp-glucose pyrophosphorylase 0.9521 27 295
8f73-assembly1.cif.gz_H crystal structure of pseudomonas aeruginosa udp-glucose phosphorylase in complex with udp-glucose 0.9505 27 294
3juk-assembly1.cif.gz_B the crystal structure of udp-glucose pyrophosphorylase complexed with udp-glucose 0.9464 27 295
8f73-assembly2.cif.gz_C crystal structure of pseudomonas aeruginosa udp-glucose phosphorylase in complex with udp-glucose 0.9454 27 297
ID Description Score Start End Superfamily
af_Q2G1T6_1_286_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9588 26 308 3.90.550.10
af_Q2G1T6_1_286_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9458 26 308 3.90.550.10
3jukA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9443 27 295 3.90.550.10
af_Q58730_1_282_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9357 27 307 3.90.550.10
3jukA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9338 27 295 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A658J916-F1-model_v4 deleted 0.9959 163 259
AF-A0A3D4LJV5-F1-model_v4 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.9891 128 281 GO:0003983
GO:0006011
GO:0009058
AF-X1NAW7-F1-model_v4 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.9825 117 252 GO:0003983
GO:0006011
GO:0009058
AF-A0A4Q2L7R5-F1-model_v4 deleted 0.9824 163 263
AF-A0A418J0T5-F1-model_v4 deleted 0.9806 138 308

Feature Viewer

pLDDT pTM Quality
86 0.83 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map