F398624

General Info

Members Datasets Scaffolds Average Seq Length
306 206 208 326

Family's Representative Sequence

Representative Sequence 3300009011|Ga0105251_10029410|Ga0105251_100294103
Length 368
Sequence VTRYKSENTGNTIGWIDPKINWMVQKEHEKNSGLFQKLGYQIIMSKDFTFTIKSISFDENYHPSNNTRITTNFANLARGESRHDNLRNTLTMIDNRFNALAHWDNPEADRYSVELEIISVDIDIEGNGETFPTIEILKTNIVDHKNNQRIEGIVGNNFSSYVRDYDFSVLLLEHNKNKDQFSLPENYGELHGKIFNAFVNSNAYKENFKKSPVICLSVSSSKVYHRTANVHPVLGVEYLQDEYSLTDEYFGKMGLQVRYFMPPNSVAPLAFYFRGDLLSDYTNLELIGTISTMETFQKIYRPEIYNANSVAGKSYQPSLKHQDYSLTRIVYDREERGQLAIKQGKFTEEQFIKPYKHILEQWSANYVA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
3 2506520008 Serratia plymuthica AS12 Isolate Unclassified
4 2547132416 Enterobacter sp. MR1 Isolate Rhizoplane
5 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
6 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
7 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
8 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
9 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
10 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
11 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
12 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
13 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
14 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
15 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
16 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
17 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
18 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
19 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
20 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
21 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
22 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
23 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
24 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
25 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
26 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
27 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
28 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
29 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
30 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
31 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
32 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
33 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
34 2602042047 Enterobacter sp. NFIX59 Isolate Rhizoplane
35 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
36 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
37 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
38 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
39 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
40 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
41 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
42 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
43 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
44 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
45 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
46 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
47 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
48 2643221665 Acinetobacter sp. Root1280 Isolate Unclassified
49 2643221693 Rhizobium sp. Root491 Isolate Unclassified
50 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
51 2651869818 Vibrio splendidus UCD-SED10 Isolate Rhizosphere
52 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
53 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
54 2681812866 Enterobacter asburiae NFIX55 Isolate Rhizoplane
55 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
56 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
57 2751185917 Enterobacter sp. HK169 Isolate Unclassified
58 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
59 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
60 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
61 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
62 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
63 2821118458 Enterobacter asburiae 609 Isolate Unclassified
64 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
65 2844425489 Enterobacter cloacae SBP-8 Isolate Rhizosphere
66 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
67 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
68 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
69 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
70 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
71 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
72 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
73 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
74 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
75 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
76 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
77 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
78 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
79 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
80 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
81 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
82 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
83 2937539931 Pantoea sp. LS15 Isolate Unclassified
84 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
85 2946006987 Pseudomonas sp. W3I7 Isolate Rhizosphere
86 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
87 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
88 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
89 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
90 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
91 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
92 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
93 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
94 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
95 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
96 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
97 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
98 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
99 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
100 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
101 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
102 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
103 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
104 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
105 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
106 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
107 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
108 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
109 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
110 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
111 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
112 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
113 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
114 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
115 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
116 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
117 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
118 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
119 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
120 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
121 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
122 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
123 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
124 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
125 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
126 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
127 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
128 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
129 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
130 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
131 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
132 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
133 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
134 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
135 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
136 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
139 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
140 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
141 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
142 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
143 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
144 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
145 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
146 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
156 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
157 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
158 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
159 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
160 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
161 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
163 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
164 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
165 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
166 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
167 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
168 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
169 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
170 3300044669 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E Metagenome Unclassified
171 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
172 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
173 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
174 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
175 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
176 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
177 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
178 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
179 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
180 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
181 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
182 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
183 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
184 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
185 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
186 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
187 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
188 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
189 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
190 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
191 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
192 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
193 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
194 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
195 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
196 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
197 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
198 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
199 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
200 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
201 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
202 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
203 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
204 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
205 8002745576 Marinomonas spartinae USM8 Isolate Rhizosphere
206 8052494512 Pseudomonas putida LD6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 67.97
Metatranscriptomes 0
Isolates 32.03

Biome Distribution

Category Percentage (%)
Aerial Root 0.33
Bulb 0
Endosphere 5.88
Nodule 3.59
Rhizoplane 14.71
Rhizosphere 40.2
Stem 0
Stem Tuber 0.65
Unclassified 34.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3939945 2162886007 Bacteria 3260
2 JGI25155J39150_1000114 3300002704 Bacteria 39873
3 JGI25156J39149_1001776 3300002705 Bacteria 8549
4 JGI25156J39149_1002503 3300002705 Bacteria 6545
5 JGI25162J39368_1001634 3300002737 Bacteria 11178
6 JGI25154J39366_1000341 3300002738 Bacteria 26907
7 JGI25154J39366_1001163 3300002738 Bacteria 10083
8 JGI25165J46597_1000116 3300003214 Bacteria 137942
9 rootH2_10011139 3300003320 Bacteria 48165
10 rootH2_10062367 3300003320 Bacteria 1729
11 rootH2_10279211 3300003320 Bacteria 1953
12 rootH1_10009383 3300003323 Bacteria 56414
13 Ga0055533_1000505 3300003756 Bacteria 14166
14 Ga0055542_1001253 3300003762 Bacteria 14041
15 Ga0055541_1002095 3300003841 Bacteria 4070
16 Ga0065714_10078136 3300005288 Bacteria 2626
17 Ga0065704_10025125 3300005289 Bacteria 1231
18 Ga0070661_100032242 3300005344 Bacteria 3792
19 Ga0070659_100029761 3300005366 Bacteria 4221
20 Ga0068855_100015153 3300005563 Bacteria 9284
21 Ga0070664_100005023 3300005564 Bacteria 10600
22 Ga0070664_100025947 3300005564 Bacteria 4858
23 Ga0068857_100002518 3300005577 Bacteria 14998
24 Ga0099823_1000001 3300006944 Bacteria 216833
25 Ga0079104_1020370 3300006946 Bacteria 1829
26 Ga0099826_10000112 3300006948 Bacteria 37415
27 Ga0099826_10020435 3300006948 Bacteria 4968
28 Ga0105251_10000021 3300009011 Bacteria 137955
29 Ga0105251_10000426 3300009011 Bacteria 40879
30 Ga0105251_10002137 3300009011 Bacteria 15887
31 Ga0105251_10029410 3300009011 Bacteria 2768
32 Ga0105244_10000071 3300009036 Bacteria 117110
33 Ga0105244_10005131 3300009036 Bacteria 8780
34 Ga0105244_10012199 3300009036 Bacteria 5097
35 Ga0105250_10001366 3300009092 Bacteria 13242
36 Ga0105250_10011955 3300009092 Bacteria 3595
37 Ga0105247_10000030 3300009101 Bacteria 187803
38 Ga0105249_10001003 3300009553 Bacteria 25024
39 Ga0105239_10198137 3300010375 Bacteria 2249
40 Ga0157373_10001594 3300013100 Bacteria 17328
41 Ga0157373_10006172 3300013100 Bacteria 8954
42 Ga0157373_10089173 3300013100 Bacteria 2172
43 Ga0157371_10000001 3300013102 Bacteria 1162285
44 Ga0157371_10000295 3300013102 Bacteria 66319
45 Ga0157371_10025782 3300013102 Bacteria 4280
46 Ga0157370_10000065 3300013104 Bacteria 113986
47 Ga0157370_10037205 3300013104 Bacteria 4718
48 Ga0157372_10065452 3300013307 Bacteria 4081
49 Ga0182008_10007836 3300014497 Bacteria 5872
50 Ga0182008_10046287 3300014497 Bacteria 2162
51 Ga0182008_10141968 3300014497 Bacteria 1202
52 Ga0182006_1006313 3300015261 Bacteria 5523
53 Ga0182006_1011945 3300015261 Bacteria 3803
54 Ga0182006_1017971 3300015261 Bacteria 2994
55 Ga0182007_10000325 3300015262 Bacteria 30256
56 Ga0183366_1001 3300015679 Bacteria 2743932
57 Ga0183370_1001 3300015680 Bacteria 2743932
58 Ga0183369_1001 3300015685 Bacteria 2743932
59 Ga0183368_1001 3300015687 Bacteria 2743932
60 Ga0183363_1006 3300015690 Bacteria 400466
61 Ga0163161_10000031 3300017792 Bacteria 166584
62 Ga0163161_10078386 3300017792 Bacteria 2428
63 Ga0163161_10356765 3300017792 Bacteria 1164
64 Ga0209435_100077 3300025206 Bacteria 52661
65 Ga0209784_100206 3300025224 Bacteria 42078
66 Ga0209566_100846 3300025225 Bacteria 15247
67 Ga0209674_100577 3300025226 Bacteria 14260
68 Ga0207427_106210 3300025231 Bacteria 1547
69 Ga0209437_100128 3300025233 Bacteria 190300
70 Ga0209646_1000063 3300025246 Bacteria 248065
71 Ga0209646_1000205 3300025246 Bacteria 69450
72 Ga0209026_1001750 3300025250 Bacteria 9003
73 Ga0209026_1002961 3300025250 Bacteria 5914
74 Ga0209148_1000019 3300025254 Bacteria 748518
75 Ga0209759_1000390 3300025256 Bacteria 54521
76 Ga0209759_1002188 3300025256 Bacteria 8954
77 Ga0209233_1000072 3300025261 Bacteria 363074
78 Ga0207696_1000001 3300025711 Bacteria 2579611
79 Ga0207696_1000018 3300025711 Bacteria 478605
80 Ga0207696_1015873 3300025711 Bacteria 2537
81 Ga0207655_1000027 3300025728 Bacteria 444552
82 Ga0207655_1027372 3300025728 Bacteria 2717
83 Ga0207713_1000003 3300025735 Bacteria 860698
84 Ga0207713_1000018 3300025735 Bacteria 362635
85 Ga0207713_1000022 3300025735 Bacteria 351775
86 Ga0207713_1000992 3300025735 Bacteria 24891
87 Ga0207713_1001234 3300025735 Bacteria 21205
88 Ga0207710_10000068 3300025900 Bacteria 152636
89 Ga0207654_10000004 3300025911 Bacteria 902334
90 Ga0207649_10078046 3300025920 Bacteria 2136
91 Ga0207679_10004275 3300025945 Bacteria 8871
92 Ga0207679_10009274 3300025945 Bacteria 6296
93 Ga0207712_10001773 3300025961 Bacteria 14379
94 Ga0207674_10007969 3300026116 Bacteria 12292
95 Ga0209281_1000003 3300027111 Bacteria 1260089
96 Ga0209281_1000605 3300027111 Bacteria 40613
97 Ga0209389_1000007 3300027296 Bacteria 227459
98 Ga0209371_1000001 3300027312 Bacteria 2771503
99 Ga0209371_1000017 3300027312 Bacteria 625776
100 Ga0209371_1000034 3300027312 Bacteria 379021
101 Ga0209371_1000278 3300027312 Bacteria 59137
102 Ga0209371_1000683 3300027312 Bacteria 29234
103 Ga0209371_1001455 3300027312 Bacteria 16034
104 Ga0209371_1006664 3300027312 Bacteria 4217
105 Ga0209489_110962 3300027361 Bacteria 9684
106 Ga0209282_1002045 3300027666 Bacteria 11478
107 Ga0209282_1048445 3300027666 Bacteria 2460
108 Ga0209813_10004793 3300027866 Bacteria 3248
109 Ga0268266_10369123 3300028379 Bacteria 1351
110 Ga0268256_1000001 3300030500 Bacteria 2771065
111 Ga0268256_1000036 3300030500 Bacteria 370250
112 Ga0268256_1000043 3300030500 Bacteria 331360
113 Ga0268256_1000231 3300030500 Bacteria 59137
114 Ga0268256_1001236 3300030500 Bacteria 16034
115 Ga0268256_1002380 3300030500 Bacteria 9677
116 Ga0395900_0121788 3300037418 Bacteria 2676
117 Ga0439438_000317 3300041405 Bacteria 21802
118 Ga0439447_002828 3300041407 Bacteria 6232
119 Ga0439448_0000236 3300042005 Bacteria 11752
120 Ga0439432_008137 3300042006 Bacteria 3691
121 Ga0439432_011627 3300042006 Bacteria 3032
122 Ga0439452_001533 3300042010 Bacteria 9309
123 Ga0439455_0000656 3300042012 Bacteria 5065
124 Ga0466981_0000010 3300044669 Bacteria 133630
125 Ga0466964_0000694 3300044706 Bacteria 10878
126 Ga0495627_000019 3300046453 Bacteria 309691
127 Ga0495605_0005581 3300046474 Bacteria 7316
128 Ga0495606_0002854 3300046507 Bacteria 19136
129 Ga0495610_0006654 3300046512 Bacteria 7883
130 Ga0495622_0011465 3300046557 Bacteria 4097
131 Ga0495625_0003925 3300046660 Bacteria 14296
132 Ga0495625_0054934 3300046660 Bacteria 2842
133 Ga0495625_0194138 3300046660 Bacteria 1343
134 Ga0495661_0001936 3300046665 Bacteria 16465
135 Ga0495670_0128794 3300046691 Bacteria 1318
136 Ga0495672_0000204 3300047320 Bacteria 84394
137 Ga0495672_0008515 3300047320 Bacteria 7552
138 Ga0495679_000019 3300047446 Bacteria 231072
139 Ga0495673_0000859 3300047469 Bacteria 28190
140 Ga0496104_0000043 3300048907 Bacteria 154773
141 Ga0496105_0264106 3300048908 Bacteria 1391
142 Ga0496110_0144876 3300048913 Bacteria 2148
143 Ga0496111_0335671 3300048914 Bacteria 1119
144 Ga0496116_0000007 3300048919 Bacteria 795464
145 Ga0496116_0156509 3300048919 Bacteria 1257
146 Ga0496117_0000718 3300048920 Bacteria 52227
147 Ga0496117_0014251 3300048920 Bacteria 6861
148 Ga0496117_0019167 3300048920 Bacteria 5629
149 Ga0496117_0022339 3300048920 Bacteria 5078
150 Ga0496117_0025330 3300048920 Bacteria 4666
151 Ga0496117_0035947 3300048920 Bacteria 3713
152 Ga0496117_0103520 3300048920 Bacteria 1794
153 Ga0496118_0009193 3300048921 Bacteria 10034
154 Ga0496118_0009872 3300048921 Bacteria 9546
155 Ga0496118_0011036 3300048921 Bacteria 8869
156 Ga0496118_0019407 3300048921 Bacteria 6077
157 Ga0496118_0153314 3300048921 Bacteria 1438
158 Ga0496119_0000039 3300048922 Bacteria 208631
159 Ga0496119_0001569 3300048922 Bacteria 27186
160 Ga0496119_0001654 3300048922 Bacteria 26212
161 Ga0496119_0005645 3300048922 Bacteria 11880
162 Ga0496119_0031407 3300048922 Bacteria 3563
163 Ga0496119_0063787 3300048922 Bacteria 2190
164 Ga0496120_0000002 3300048923 Bacteria 547999
165 Ga0496120_0000430 3300048923 Bacteria 66414
166 Ga0496120_0000497 3300048923 Bacteria 61419
167 Ga0496120_0004312 3300048923 Bacteria 12047
168 Ga0496120_0004392 3300048923 Bacteria 11859
169 Ga0496120_0096745 3300048923 Bacteria 1567
170 Ga0496121_0000705 3300048924 Bacteria 62174
171 Ga0496121_0000816 3300048924 Bacteria 56863
172 Ga0496121_0010035 3300048924 Bacteria 10752
173 Ga0496121_0016031 3300048924 Bacteria 7768
174 Ga0496121_0046688 3300048924 Bacteria 3704
175 Ga0496121_0121807 3300048924 Bacteria 1969
176 Ga0496121_0141826 3300048924 Bacteria 1781
177 Ga0496122_0000043 3300048925 Bacteria 280333
178 Ga0496122_0000068 3300048925 Bacteria 226155
179 Ga0496122_0007133 3300048925 Bacteria 12536
180 Ga0496122_0021364 3300048925 Bacteria 5797
181 Ga0496122_0045727 3300048925 Bacteria 3398
182 Ga0496122_0146618 3300048925 Bacteria 1465
183 Ga0496123_0000059 3300048926 Bacteria 226155
184 Ga0496123_0000090 3300048926 Bacteria 179735
185 Ga0496123_0000415 3300048926 Bacteria 77849
186 Ga0496123_0007122 3300048926 Bacteria 10621
187 Ga0496123_0008022 3300048926 Bacteria 9781
188 Ga0496123_0029635 3300048926 Bacteria 4022
189 Ga0496123_0030336 3300048926 Bacteria 3959
190 Ga0496124_0000005 3300048927 Bacteria 922323
191 Ga0496124_0000983 3300048927 Bacteria 45224
192 Ga0496124_0004141 3300048927 Bacteria 17126
193 Ga0496124_0098413 3300048927 Bacteria 2373
194 Ga0496124_0126434 3300048927 Bacteria 2035
195 Ga0496124_0133763 3300048927 Bacteria 1966
196 Ga0496125_0000232 3300048928 Bacteria 114025
197 Ga0496125_0000610 3300048928 Bacteria 60637
198 Ga0496125_0001597 3300048928 Bacteria 32038
199 Ga0496125_0003927 3300048928 Bacteria 17538
200 Ga0496125_0008888 3300048928 Bacteria 10431
201 Ga0496125_0098465 3300048928 Bacteria 2163
202 Ga0496126_0000142 3300048929 Bacteria 164438
203 Ga0496126_0001077 3300048929 Bacteria 45939
204 nmdc:mga0yw44_139870_c1 3300050492 Bacteria 1573
205 Ga0500658_0000003 3300053134 Bacteria 512506
206 Ga0500561_0000020 3300053137 Bacteria 39471
207 Ga0500622_0004459 3300053156 Bacteria 8780
208 Ga0500634_0000284 3300053161 Bacteria 16228

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300013102 Ga0157371_10025782 Ga0157371_100257823 275
2 3300046557 Ga0495622_0011465 Ga0495622_0011465_929_1828 299
3 3300015261 Ga0182006_1011945 Ga0182006_10119453 307
4 3300015261 Ga0182006_1017971 Ga0182006_10179713 307
5 3300003320 rootH2_10279211 rootH2_102792111 311
6 3300003323 rootH1_10009383 rootH1_1000938337 311
7 3300046512 Ga0495610_0006654 Ga0495610_0006654_2622_3605 311
8 3300009011 Ga0105251_10000021 Ga0105251_1000002174 312
9 3300025735 Ga0207713_1000003 Ga0207713_1000003286 312
10 3300048922 Ga0496119_0005645 Ga0496119_0005645_672_1649 312
11 3300048923 Ga0496120_0004392 Ga0496120_0004392_10208_11185 312
12 3300048922 Ga0496119_0063787 Ga0496119_0063787_653_1636 313
13 3300002704 JGI25155J39150_1000114 JGI25155J39150_10001142 316
14 3300002705 JGI25156J39149_1001776 JGI25156J39149_10017769 316
15 3300002738 JGI25154J39366_1000341 JGI25154J39366_100034123 316
16 3300025206 Ga0209435_100077 Ga0209435_10007710 316
17 3300025246 Ga0209646_1000205 Ga0209646_100020578 316
18 3300025250 Ga0209026_1001750 Ga0209026_10017509 316
19 3300025256 Ga0209759_1000390 Ga0209759_100039055 316
20 3300048919 Ga0496116_0156509 Ga0496116_0156509_147_1100 317
21 3300003320 rootH2_10062367 rootH2_100623671 319
22 3300009011 Ga0105251_10000426 Ga0105251_1000042640 319
23 3300013100 Ga0157373_10001594 Ga0157373_100015946 319
24 3300014497 Ga0182008_10007836 Ga0182008_100078362 319
25 3300025735 Ga0207713_1000018 Ga0207713_1000018131 319
26 3300025911 Ga0207654_10000004 Ga0207654_10000004541 319
27 3300027111 Ga0209281_1000003 Ga0209281_10000031196 319
28 3300048913 Ga0496110_0144876 Ga0496110_0144876_33_1034 320
29 3300048914 Ga0496111_0335671 Ga0496111_0335671_20_1021 320
30 3300048927 Ga0496124_0000005 Ga0496124_0000005_153655_154656 320
31 iso_pu_bacteria 2547132416 2548651289 320
32 iso_pu_bacteria 2565956521 2566036030 320
33 iso_pu_bacteria 2599185169 2599408906 320
34 iso_pu_bacteria 2600255307 2601740978 320
35 iso_pu_bacteria 2600255309 2601750908 320
36 iso_pu_bacteria 2600255392 2602018162 320
37 iso_pu_bacteria 2602042047 2603642419 320
38 iso_pu_bacteria 2602042067 2603703019 320
39 iso_pu_bacteria 2675903046 2676406046 320
40 iso_pu_bacteria 2681812866 2681997347 320
41 iso_pu_bacteria 2751185917 2753855950 320
42 iso_pu_bacteria 2775506706 2775538967 320
43 iso_pu_bacteria 2821118458 2821119785 320
44 iso_pu_bacteria 2844425489 2844427499 320
45 iso_pu_bacteria 2919497567 2919498310 320
46 iso_pu_bacteria 2923634449 2923634830 320
47 iso_pu_bacteria 2927833300 2927834126 320
48 iso_pu_bacteria 2937539931 2937541686 320
49 iso_pu_bacteria 2506520007 2506579316 321
50 iso_pu_bacteria 2506520008 2506584455 321
51 iso_pu_bacteria 2554235003 2554249541 321
52 iso_pu_bacteria 2554235234 2555257675 321
53 iso_pu_bacteria 2558860242 2559298129 321
54 iso_pu_bacteria 2600255254 2601522578 321
55 iso_pu_bacteria 2600255255 2601527605 321
56 iso_pu_bacteria 2600255280 2601614436 321
57 iso_pu_bacteria 2600255281 2601619156 321
58 iso_pu_bacteria 2600255287 2601642231 321
59 iso_pu_bacteria 2600255288 2601647086 321
60 iso_pu_bacteria 2600255289 2601652583 321
61 iso_pu_bacteria 2600255290 2601657909 321
62 iso_pu_bacteria 2600255291 2601662054 321
63 iso_pu_bacteria 2600255298 2601695012 321
64 iso_pu_bacteria 2600255299 2601699684 321
65 iso_pu_bacteria 2600255300 2601706428 321
66 iso_pu_bacteria 2600255301 2601710734 321
67 iso_pu_bacteria 2600255302 2601715748 321
68 iso_pu_bacteria 2600255303 2601720035 321
69 iso_pu_bacteria 2600255304 2601726154 321
70 iso_pu_bacteria 2600255305 2601730695 321
71 iso_pu_bacteria 2600255306 2601735711 321
72 iso_pu_bacteria 2602042052 2603659416 321
73 iso_pu_bacteria 2602042053 2603664691 321
74 iso_pu_bacteria 2602042103 2603838088 321
75 iso_pu_bacteria 2602042104 2603843166 321
76 iso_pu_bacteria 2602042105 2603848239 321
77 iso_pu_bacteria 2602042106 2603853314 321
78 iso_pu_bacteria 2602042110 2603871365 321
79 iso_pu_bacteria 2602042111 2603876288 321
80 iso_pu_bacteria 2603880178 2606048557 321
81 iso_pu_bacteria 2603880184 2606069118 321
82 iso_pu_bacteria 2603880202 2606144932 321
83 iso_pu_bacteria 2603880211 2606175959 321
84 iso_pu_bacteria 2643221693 2644523562 321
85 iso_pu_bacteria 2648501241 2649121728 321
86 iso_pu_bacteria 2651869818 2652975236 321
87 iso_pu_bacteria 2654587920 2656276488 321
88 iso_pu_bacteria 2687453601 2689445854 321
89 iso_pu_bacteria 2738541276 2738715332 321
90 iso_pu_bacteria 2808606387 2808989362 321
91 iso_pu_bacteria 2854601825 2854604672 321
92 iso_pu_bacteria 2858466076 2858470284 321
93 iso_pu_bacteria 2885080285 2885082180 321
94 iso_pu_bacteria 2899845264 2899846731 321
95 iso_pu_bacteria 2916699645 2916701114 321
96 iso_pu_bacteria 2928515477 2928517276 321
97 iso_pu_bacteria 2971820967 2971823443 321
98 iso_pu_bacteria 2978969890 2978974751 321
99 iso_pu_bacteria 2979089926 2979095148 321
100 iso_pu_bacteria 2979095461 2979097399 321
101 iso_pu_bacteria 2984568884 2984571598 321
102 iso_pu_bacteria 650716007 650741820 321
103 iso_pu_bacteria 8002392321 8002393995 321
104 iso_pu_bacteria 8002745576 8002747323 321
105 3300005344 Ga0070661_100032242 Ga0070661_1000322422 322
106 3300005564 Ga0070664_100005023 Ga0070664_1000050236 322
107 3300025920 Ga0207649_10078046 Ga0207649_100780462 322
108 3300025945 Ga0207679_10004275 Ga0207679_100042754 322
109 iso_pu_bacteria 2844852863 2844855020 322
110 iso_pu_bacteria 2919688452 2919692487 322
111 iso_pu_bacteria 2974294766 2974296591 322
112 iso_pu_bacteria 2974324384 2974327174 322
113 iso_pu_bacteria 2582581294 2585204496 323
114 iso_pu_bacteria 2600255279 2601611112 323
115 iso_pu_bacteria 2600255308 2601747885 323
116 iso_pu_bacteria 2806310737 2807407997 323
117 iso_pu_bacteria 2806310745 2807456300 323
118 iso_pu_bacteria 2908669403 2908670278 323
119 iso_pu_bacteria 2928130867 2928132128 323
120 iso_pu_bacteria 2928972540 2928975034 323
121 iso_pu_bacteria 2933594066 2933598211 323
122 iso_pu_bacteria 2939602548 2939605435 323
123 iso_pu_bacteria 2946006987 2946008721 323
124 iso_pu_bacteria 2977240413 2977241971 323
125 iso_pu_bacteria 3007395558 3007397002 323
126 iso_pu_bacteria 3007803356 3007805878 323
127 iso_pu_bacteria 8052494512 8052497756 323
128 3300003320 rootH2_10011139 rootH2_1001113920 324
129 3300005288 Ga0065714_10078136 Ga0065714_100781362 324
130 3300005289 Ga0065704_10025125 Ga0065704_100251251 324
131 3300005366 Ga0070659_100029761 Ga0070659_1000297612 324
132 3300005577 Ga0068857_100002518 Ga0068857_1000025189 324
133 3300006946 Ga0079104_1020370 Ga0079104_10203702 324
134 3300009092 Ga0105250_10011955 Ga0105250_100119552 324
135 3300013100 Ga0157373_10089173 Ga0157373_100891732 324
136 3300015679 Ga0183366_1001 Ga0183366_10011360 324
137 3300015680 Ga0183370_1001 Ga0183370_10011360 324
138 3300015685 Ga0183369_1001 Ga0183369_10011360 324
139 3300015687 Ga0183368_1001 Ga0183368_10011360 324
140 3300025711 Ga0207696_1015873 Ga0207696_10158733 324
141 3300025735 Ga0207713_1001234 Ga0207713_10012349 324
142 3300026116 Ga0207674_10007969 Ga0207674_100079693 324
143 3300027111 Ga0209281_1000605 Ga0209281_10006057 324
144 3300027312 Ga0209371_1000001 Ga0209371_10000011286 324
145 3300027312 Ga0209371_1000278 Ga0209371_100027862 324
146 3300027312 Ga0209371_1006664 Ga0209371_10066645 324
147 3300030500 Ga0268256_1000001 Ga0268256_10000011355 324
148 3300030500 Ga0268256_1000231 Ga0268256_100023162 324
149 3300042010 Ga0439452_001533 Ga0439452_001533_3719_4705 324
150 3300044669 Ga0466981_0000010 Ga0466981_0000010_17618_18592 324
151 3300048907 Ga0496104_0000043 Ga0496104_0000043_66151_67125 324
152 3300048908 Ga0496105_0264106 Ga0496105_0264106_66_1040 324
153 3300048920 Ga0496117_0022339 Ga0496117_0022339_3825_4799 324
154 3300048920 Ga0496117_0025330 Ga0496117_0025330_1789_2763 324
155 3300048922 Ga0496119_0001569 Ga0496119_0001569_18076_19050 324
156 3300048922 Ga0496119_0001654 Ga0496119_0001654_782_1756 324
157 3300048923 Ga0496120_0000497 Ga0496120_0000497_55573_56547 324
158 3300048923 Ga0496120_0004312 Ga0496120_0004312_7435_8409 324
159 3300048923 Ga0496120_0096745 Ga0496120_0096745_61_1035 324
160 3300048924 Ga0496121_0000816 Ga0496121_0000816_14073_15047 324
161 3300048924 Ga0496121_0010035 Ga0496121_0010035_898_1872 324
162 3300048924 Ga0496121_0016031 Ga0496121_0016031_3549_4523 324
163 3300048924 Ga0496121_0046688 Ga0496121_0046688_345_1319 324
164 3300048925 Ga0496122_0021364 Ga0496122_0021364_3964_4938 324
165 3300048925 Ga0496122_0045727 Ga0496122_0045727_1928_2902 324
166 3300048926 Ga0496123_0007122 Ga0496123_0007122_3580_4554 324
167 3300048926 Ga0496123_0008022 Ga0496123_0008022_2839_3813 324
168 3300048926 Ga0496123_0029635 Ga0496123_0029635_37_1011 324
169 3300048926 Ga0496123_0030336 Ga0496123_0030336_1787_2761 324
170 3300048927 Ga0496124_0000983 Ga0496124_0000983_10427_11401 324
171 3300048927 Ga0496124_0126434 Ga0496124_0126434_1047_2021 324
172 3300048928 Ga0496125_0000610 Ga0496125_0000610_34958_35932 324
173 3300048928 Ga0496125_0001597 Ga0496125_0001597_7488_8462 324
174 3300048928 Ga0496125_0003927 Ga0496125_0003927_11433_12407 324
175 3300048928 Ga0496125_0098465 Ga0496125_0098465_350_1324 324
176 3300048929 Ga0496126_0000142 Ga0496126_0000142_73448_74422 324
177 3300048929 Ga0496126_0001077 Ga0496126_0001077_40044_41018 324
178 3300005564 Ga0070664_100025947 Ga0070664_1000259473 325
179 3300009011 Ga0105251_10002137 Ga0105251_100021372 325
180 3300009011 Ga0105251_10029410 Ga0105251_100294103 325
181 3300009092 Ga0105250_10001366 Ga0105250_100013663 325
182 3300009101 Ga0105247_10000030 Ga0105247_10000030113 325
183 3300009553 Ga0105249_10001003 Ga0105249_100010036 325
184 3300010375 Ga0105239_10198137 Ga0105239_101981372 325
185 3300013100 Ga0157373_10006172 Ga0157373_100061726 325
186 3300013102 Ga0157371_10000295 Ga0157371_1000029548 325
187 3300013104 Ga0157370_10000065 Ga0157370_100000655 325
188 3300013307 Ga0157372_10065452 Ga0157372_100654523 325
189 3300014497 Ga0182008_10141968 Ga0182008_101419681 325
190 3300017792 Ga0163161_10000031 Ga0163161_1000003132 325
191 3300017792 Ga0163161_10356765 Ga0163161_103567652 325
192 3300025711 Ga0207696_1000001 Ga0207696_10000012092 325
193 3300025728 Ga0207655_1027372 Ga0207655_10273723 325
194 3300025735 Ga0207713_1000022 Ga0207713_1000022205 325
195 3300025900 Ga0207710_10000068 Ga0207710_10000068114 325
196 3300025945 Ga0207679_10009274 Ga0207679_100092743 325
197 3300025961 Ga0207712_10001773 Ga0207712_100017736 325
198 3300027312 Ga0209371_1001455 Ga0209371_100145513 325
199 3300027866 Ga0209813_10004793 Ga0209813_100047932 325
200 3300028379 Ga0268266_10369123 Ga0268266_103691231 325
201 3300030500 Ga0268256_1001236 Ga0268256_10012365 325
202 3300037418 Ga0395900_0121788 Ga0395900_0121788_1139_2116 325
203 3300041405 Ga0439438_000317 Ga0439438_000317_3029_4006 325
204 3300041407 Ga0439447_002828 Ga0439447_002828_5230_6207 325
205 3300042005 Ga0439448_0000236 Ga0439448_0000236_729_1733 325
206 3300042006 Ga0439432_011627 Ga0439432_011627_342_1319 325
207 3300042012 Ga0439455_0000656 Ga0439455_0000656_3942_4946 325
208 3300046453 Ga0495627_000019 Ga0495627_000019_285425_286402 325
209 3300046660 Ga0495625_0003925 Ga0495625_0003925_1577_2554 325
210 3300046660 Ga0495625_0194138 Ga0495625_0194138_216_1322 325
211 3300047320 Ga0495672_0000204 Ga0495672_0000204_3858_4835 325
212 3300047446 Ga0495679_000019 Ga0495679_000019_131669_132646 325
213 3300048919 Ga0496116_0000007 Ga0496116_0000007_22132_23109 325
214 3300048920 Ga0496117_0019167 Ga0496117_0019167_3637_4614 325
215 3300048921 Ga0496118_0019407 Ga0496118_0019407_1263_2240 325
216 3300048922 Ga0496119_0000039 Ga0496119_0000039_80148_81125 325
217 3300048923 Ga0496120_0000002 Ga0496120_0000002_419463_420440 325
218 3300048923 Ga0496120_0000430 Ga0496120_0000430_10608_11585 325
219 3300048925 Ga0496122_0000068 Ga0496122_0000068_193515_194492 325
220 3300048926 Ga0496123_0000059 Ga0496123_0000059_31664_32641 325
221 3300048926 Ga0496123_0000415 Ga0496123_0000415_25194_26261 325
222 3300048927 Ga0496124_0098413 Ga0496124_0098413_229_1206 325
223 3300050492 nmdc:mga0yw44_139870_c1 nmdc:mga0yw44_139870_c1_325_1302 325
224 3300053137 Ga0500561_0000020 Ga0500561_0000020_37480_38457 325
225 iso_pu_bacteria 2643221665 2644363326 325
226 iso_pu_bacteria 2842903701 2842904539 325
227 3300013104 Ga0157370_10037205 Ga0157370_100372052 326
228 3300027312 Ga0209371_1000034 Ga0209371_1000034163 326
229 3300030500 Ga0268256_1000043 Ga0268256_1000043162 326
230 3300048925 Ga0496122_0007133 Ga0496122_0007133_5359_6345 326
231 2162886007 SwRhRL2b_contig_3939945 SwRhRL2b_0035.00006070 327
232 3300002705 JGI25156J39149_1002503 JGI25156J39149_10025033 327
233 3300002737 JGI25162J39368_1001634 JGI25162J39368_10016346 327
234 3300002738 JGI25154J39366_1001163 JGI25154J39366_10011636 327
235 3300003214 JGI25165J46597_1000116 JGI25165J46597_1000116135 327
236 3300003756 Ga0055533_1000505 Ga0055533_10005055 327
237 3300003762 Ga0055542_1001253 Ga0055542_10012535 327
238 3300003841 Ga0055541_1002095 Ga0055541_10020953 327
239 3300005563 Ga0068855_100015153 Ga0068855_10001515311 327
240 3300006944 Ga0099823_1000001 Ga0099823_1000001123 327
241 3300006948 Ga0099826_10000112 Ga0099826_100001127 327
242 3300006948 Ga0099826_10020435 Ga0099826_100204354 327
243 3300009036 Ga0105244_10000071 Ga0105244_1000007179 327
244 3300009036 Ga0105244_10005131 Ga0105244_100051319 327
245 3300009036 Ga0105244_10012199 Ga0105244_100121995 327
246 3300013102 Ga0157371_10000001 Ga0157371_10000001706 327
247 3300014497 Ga0182008_10046287 Ga0182008_100462872 327
248 3300015261 Ga0182006_1006313 Ga0182006_10063132 327
249 3300015262 Ga0182007_10000325 Ga0182007_1000032526 327
250 3300015690 Ga0183363_1006 Ga0183363_1006370 327
251 3300017792 Ga0163161_10078386 Ga0163161_100783862 327
252 3300025224 Ga0209784_100206 Ga0209784_1002063 327
253 3300025225 Ga0209566_100846 Ga0209566_10084611 327
254 3300025226 Ga0209674_100577 Ga0209674_1005775 327
255 3300025231 Ga0207427_106210 Ga0207427_1062101 327
256 3300025233 Ga0209437_100128 Ga0209437_10012814 327
257 3300025246 Ga0209646_1000063 Ga0209646_10000633 327
258 3300025250 Ga0209026_1002961 Ga0209026_10029615 327
259 3300025254 Ga0209148_1000019 Ga0209148_1000019649 327
260 3300025256 Ga0209759_1002188 Ga0209759_10021885 327
261 3300025261 Ga0209233_1000072 Ga0209233_1000072342 327
262 3300025711 Ga0207696_1000018 Ga0207696_100001864 327
263 3300025728 Ga0207655_1000027 Ga0207655_1000027284 327
264 3300025735 Ga0207713_1000992 Ga0207713_100099215 327
265 3300027296 Ga0209389_1000007 Ga0209389_1000007134 327
266 3300027312 Ga0209371_1000017 Ga0209371_1000017171 327
267 3300027312 Ga0209371_1000683 Ga0209371_100068311 327
268 3300027361 Ga0209489_110962 Ga0209489_1109625 327
269 3300027666 Ga0209282_1002045 Ga0209282_10020457 327
270 3300027666 Ga0209282_1048445 Ga0209282_10484453 327
271 3300030500 Ga0268256_1000036 Ga0268256_1000036234 327
272 3300030500 Ga0268256_1002380 Ga0268256_10023807 327
273 3300042006 Ga0439432_008137 Ga0439432_008137_1958_2941 327
274 3300044706 Ga0466964_0000694 Ga0466964_0000694_7653_8636 327
275 3300046474 Ga0495605_0005581 Ga0495605_0005581_35_1018 327
276 3300046507 Ga0495606_0002854 Ga0495606_0002854_7255_8238 327
277 3300046660 Ga0495625_0054934 Ga0495625_0054934_1553_2536 327
278 3300046665 Ga0495661_0001936 Ga0495661_0001936_9134_10117 327
279 3300046691 Ga0495670_0128794 Ga0495670_0128794_60_1046 327
280 3300047320 Ga0495672_0008515 Ga0495672_0008515_6064_7047 327
281 3300047469 Ga0495673_0000859 Ga0495673_0000859_13271_14257 327
282 3300048920 Ga0496117_0000718 Ga0496117_0000718_44375_45358 327
283 3300048920 Ga0496117_0014251 Ga0496117_0014251_1536_2519 327
284 3300048920 Ga0496117_0035947 Ga0496117_0035947_2616_3599 327
285 3300048920 Ga0496117_0103520 Ga0496117_0103520_261_1244 327
286 3300048921 Ga0496118_0009193 Ga0496118_0009193_4293_5276 327
287 3300048921 Ga0496118_0009872 Ga0496118_0009872_6867_7850 327
288 3300048921 Ga0496118_0011036 Ga0496118_0011036_5833_6816 327
289 3300048921 Ga0496118_0153314 Ga0496118_0153314_242_1225 327
290 3300048922 Ga0496119_0031407 Ga0496119_0031407_1815_2798 327
291 3300048924 Ga0496121_0000705 Ga0496121_0000705_58628_59611 327
292 3300048924 Ga0496121_0121807 Ga0496121_0121807_813_1796 327
293 3300048924 Ga0496121_0141826 Ga0496121_0141826_738_1721 327
294 3300048925 Ga0496122_0000043 Ga0496122_0000043_202911_203894 327
295 3300048925 Ga0496122_0146618 Ga0496122_0146618_204_1229 327
296 3300048926 Ga0496123_0000090 Ga0496123_0000090_76433_77416 327
297 3300048927 Ga0496124_0004141 Ga0496124_0004141_449_1474 327
298 3300048927 Ga0496124_0133763 Ga0496124_0133763_84_1070 327
299 3300048928 Ga0496125_0000232 Ga0496125_0000232_69529_70512 327
300 3300048928 Ga0496125_0008888 Ga0496125_0008888_7596_8621 327
301 3300053134 Ga0500658_0000003 Ga0500658_0000003_38851_39903 327
302 3300053156 Ga0500622_0004459 Ga0500622_0004459_6160_7146 327
303 3300053161 Ga0500634_0000284 Ga0500634_0000284_9002_9985 327
304 iso_pu_bacteria 2816332280 2817417265 327
305 iso_pu_bacteria 2895498888 2895500900 327
306 iso_pu_bacteria 2903895155 2903898005 327

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08908

MesX

Putative oxygenase MesX

44

364

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tw1-assembly1.cif.gz_B crystal structure of the octameric pore complex of the staphylococcus aureus bi-component toxin lukgh 0.5468 62 113
4tw1-assembly1.cif.gz_F crystal structure of the octameric pore complex of the staphylococcus aureus bi-component toxin lukgh 0.5436 62 113
4tw1-assembly2.cif.gz_P crystal structure of the octameric pore complex of the staphylococcus aureus bi-component toxin lukgh 0.5405 62 113
4uv2-assembly2.cif.gz_P structure of the curli transport lipoprotein csgg in a non-lipidated, pre-pore conformation 0.4976 68 110
5ig4-assembly1.cif.gz_F crystal structure of n. vectensis camkii-a hub 0.4944 66 110
ID Description Score Start End Superfamily
af_A0A2R8QM50_20_129_3.10.450.10 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.6334 67 113 3.10.450.10
af_A0A0P0WYC6_63_253_2.170.150.80 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;NAC domain 0.6138 66 113 2.170.150.80
af_P19218_219_337_2.60.40.3210 Mainly Beta;Sandwich;Immunoglobulin-like;Zona pellucida, ZP-N domain 0.6092 70 105 2.60.40.3210
af_Q91X17_333_450_2.60.40.3210 Mainly Beta;Sandwich;Immunoglobulin-like;Zona pellucida, ZP-N domain 0.5808 70 105 2.60.40.3210
af_Q5U3G4_82_228_3.30.390.80 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;DNA repair protein Rad52/59/22 0.5687 58 103 3.30.390.80
ID Description Score Start End GO Terms
AF-A0A2E2LVT8-F1-model_v4 deleted 0.9869 1 248
AF-A0A2E2LVT8-F1-model_v4 deleted 0.9829 1 248
AF-A0A3D3H7R9-F1-model_v4 DUF1852 domain-containing protein 0.9826 3 258
AF-A0A7C1SVK1-F1-model_v4 DUF1852 family protein 0.9823 1 263
AF-A0A261WL33-F1-model_v4 DUF1852 domain-containing protein 0.9777 1 220

Feature Viewer

pLDDT pTM Quality
87.54 0.88 High
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Predicted Structure (AlphaFold2)

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