F398192

General Info

Members Datasets Scaffolds Average Seq Length
305 225 610 596

Family's Representative Sequence

Representative Sequence 3300031712|Ga0265342_10032718|Ga0265342_100327182
Length 680
Sequence VRAAEIGLIAHVDVVGSPGGRLDPWVANGLIPGIRRLAPSPTQPCSDTFRRGAVERLGLRARLSGGPVREFTSPAVVTIADDATLTDIVATHAATRPDAVMFRRRPAEPATTKNTAWTPVSAAEFFAQVESLAAGFLAVGFAPGQRVGLLSRTRYEWTLTDYALWHAGLVTVPIYETSAPDQICWILGDSQAVGVVVETAVHATTVAEIRDQLPDLQEVWVIENDDLDRLARDGDTTDPAALATARESINAASLASIIYTSGTTGRPKGCALTHRNLLFGATSAVESLPTLFIGNTSALLFLPLAHVFARDIQVALVHAAVPVGHCPSTRSLQDDLAAFKPTLLLAVPFVFERLYAAAQQKAVDQNKGKIFALAAATAIHASEARERGKVPLVLRLKRAALDVLVFRKLRAALGGDVEWVISGGAPLGTRLGHFFRGAGIPVLEGWGLTETTAAASVNRPDAVKIGTVGPPLAGTTVRVADDGELLVAGEHVFDRYWADPEATAAARDADGFLHTGDLGDIDNDGFITITGRKKEILVTAGGKNVSPAQLEDRLRGHPLIAQAMVVGDRRPYIASLITIDGEALVAWKSKVGKDPSLGLAELRDDPDLLAEIEAAVADANRVVSRAESIRRFRILDRDFTEAGGQLTPTLKLRRGVVMTEFADDIEGLYSPAAPAPKMAP

Samples

Sample ID Description Type Environment
1 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
5 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
74 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
75 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
112 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
113 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
114 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
115 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
116 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
117 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
121 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
123 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
124 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
125 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
126 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
130 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
131 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
132 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
133 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
134 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
135 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
136 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
139 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
140 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
143 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
144 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
147 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
148 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
149 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
150 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
153 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
154 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
155 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
156 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
157 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
158 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
159 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
160 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
161 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
162 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
163 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
164 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
165 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
166 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
167 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
168 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
169 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
170 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
171 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
172 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
173 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
174 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
175 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
178 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
179 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
180 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
181 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
182 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
183 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
184 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
185 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
186 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
187 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
188 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
189 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
190 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
191 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
192 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
193 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
194 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
195 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
196 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
197 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
198 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
199 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
200 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
201 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
202 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
203 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
204 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
205 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
206 2858882152 Micromonospora noduli MED15 Isolate Nodule
207 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
208 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
209 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
210 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
211 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
212 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
213 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
214 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
215 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
216 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
217 2922554459 Rhodococcus sp. 66b Isolate Unclassified
218 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
219 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
220 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
221 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
222 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
223 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
224 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
225 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.87
Metatranscriptomes 0.66
Isolates 11.48

Biome Distribution

Category Percentage (%)
Aerial Root 0.33
Bulb 0
Endosphere 7.87
Nodule 0.66
Rhizoplane 7.54
Rhizosphere 73.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265342_10032718 3300031712 Bacteria 3205
2 JGI24743J22301_10004583 3300001991 Bacteria 2261
3 JGI24735J21928_10013971 3300002067 Bacteria 2518
4 JGI24749J21850_1001645 3300002076 Bacteria 3172
5 JGI24744J21845_10002338 3300002077 Bacteria 3869
6 Ga0055540_1002706 3300003792 Bacteria 9128
7 Ga0055540_1005160 3300003792 Bacteria 5611
8 Ga0058863_11745973 3300004799 Bacteria 1988
9 Ga0070658_10005867 3300005327 Bacteria 9958
10 Ga0070658_10015031 3300005327 Bacteria 6196
11 Ga0068869_100046905 3300005334 Bacteria 3118
12 Ga0070680_100000052 3300005336 Bacteria 59665
13 Ga0070680_100019733 3300005336 Bacteria 5346
14 Ga0070680_100078145 3300005336 Bacteria 2726
15 Ga0070682_100006963 3300005337 Bacteria 6359
16 Ga0068868_100004650 3300005338 Bacteria 9631
17 Ga0070660_100072183 3300005339 Bacteria 2697
18 Ga0070660_100130124 3300005339 Bacteria 2013
19 Ga0070689_100001922 3300005340 Bacteria 13433
20 Ga0070668_100005072 3300005347 Bacteria 9750
21 Ga0070674_100000581 3300005356 Bacteria 18458
22 Ga0070688_100005050 3300005365 Bacteria 6912
23 Ga0070688_100018288 3300005365 Bacteria 4042
24 Ga0070667_100014001 3300005367 Bacteria 6629
25 Ga0070714_100000012 3300005435 Bacteria 226258
26 Ga0070714_100043069 3300005435 Bacteria 3816
27 Ga0070711_100001079 3300005439 Bacteria 14561
28 Ga0070711_100027342 3300005439 Bacteria 3744
29 Ga0070705_100004751 3300005440 Bacteria 6615
30 Ga0070700_100000004 3300005441 Bacteria 245987
31 Ga0070700_100005401 3300005441 Bacteria 6766
32 Ga0070694_100011967 3300005444 Bacteria 5384
33 Ga0070678_100008146 3300005456 Bacteria 6262
34 Ga0070681_10000004 3300005458 Bacteria 205157
35 Ga0068867_100009541 3300005459 Bacteria 6841
36 Ga0070679_100000664 3300005530 Bacteria 29308
37 Ga0070679_100027676 3300005530 Bacteria 5581
38 Ga0070684_100009872 3300005535 Bacteria 7543
39 Ga0070684_100033750 3300005535 Bacteria 4372
40 Ga0068853_100012717 3300005539 Bacteria 6853
41 Ga0068853_100031812 3300005539 Bacteria 4465
42 Ga0070695_100007477 3300005545 Bacteria 6471
43 Ga0070696_100004718 3300005546 Bacteria 9115
44 Ga0070665_100037085 3300005548 Bacteria 4903
45 Ga0070665_100071884 3300005548 Bacteria 3467
46 Ga0070704_100000677 3300005549 Bacteria 16532
47 Ga0070704_100015278 3300005549 Bacteria 4820
48 Ga0068855_100008250 3300005563 Bacteria 12591
49 Ga0068855_100141545 3300005563 Bacteria 2741
50 Ga0068857_100097314 3300005577 Bacteria 2638
51 Ga0070702_100005596 3300005615 Bacteria 5875
52 Ga0070702_100023086 3300005615 Bacteria 3300
53 Ga0068864_100038980 3300005618 Bacteria 4060
54 Ga0068866_10000520 3300005718 Bacteria 17787
55 Ga0068861_100003598 3300005719 Bacteria 10321
56 Ga0068861_100021255 3300005719 Bacteria 4664
57 Ga0068861_100029230 3300005719 Bacteria 4030
58 Ga0068858_100014971 3300005842 Bacteria 7298
59 Ga0068860_100006908 3300005843 Bacteria 11380
60 Ga0068862_100004016 3300005844 Bacteria 12473
61 Ga0081455_10008234 3300005937 Bacteria 10866
62 Ga0081455_10014353 3300005937 Bacteria 7772
63 Ga0075365_10013853 3300006038 Bacteria 4837
64 Ga0075363_100000454 3300006048 Bacteria 12853
65 Ga0075363_100001144 3300006048 Bacteria 9695
66 Ga0075363_100005022 3300006048 Bacteria 5854
67 Ga0075363_100005711 3300006048 Bacteria 5573
68 Ga0075364_10002046 3300006051 Bacteria 11255
69 Ga0075364_10011605 3300006051 Bacteria 5356
70 Ga0070716_100005387 3300006173 Bacteria 6193
71 Ga0070712_100001110 3300006175 Bacteria 16202
72 Ga0070712_100054270 3300006175 Bacteria 2801
73 Ga0075367_10000226 3300006178 Bacteria 18896
74 Ga0075428_100001482 3300006844 Bacteria 25105
75 Ga0075431_100016513 3300006847 Bacteria 7493
76 Ga0068865_100004263 3300006881 Bacteria 8625
77 Ga0105245_10000546 3300009098 Bacteria 34304
78 Ga0105245_10083709 3300009098 Bacteria 2920
79 Ga0105247_10000268 3300009101 Bacteria 48320
80 Ga0114129_10291179 3300009147 Bacteria 2179
81 Ga0105243_10000329 3300009148 Bacteria 51977
82 Ga0105243_10001875 3300009148 Bacteria 17930
83 Ga0105241_10079143 3300009174 Bacteria 2570
84 Ga0105242_10001078 3300009176 Bacteria 21421
85 Ga0105248_10005867 3300009177 Bacteria 13493
86 Ga0105237_10008949 3300009545 Bacteria 10780
87 Ga0105237_10068406 3300009545 Bacteria 3545
88 Ga0105238_10146709 3300009551 Bacteria 2336
89 Ga0105249_10001494 3300009553 Bacteria 20512
90 Ga0157370_10009456 3300013104 Bacteria 10411
91 Ga0157370_10078283 3300013104 Bacteria 3114
92 Ga0157369_10005060 3300013105 Bacteria 15437
93 Ga0157369_10021410 3300013105 Bacteria 7233
94 Ga0157374_10003900 3300013296 Bacteria 12523
95 Ga0157374_10138495 3300013296 Bacteria 2361
96 Ga0157378_10000438 3300013297 Bacteria 40289
97 Ga0157378_10114173 3300013297 Bacteria 2481
98 Ga0163162_10008681 3300013306 Bacteria 9890
99 Ga0163162_10102579 3300013306 Bacteria 2954
100 Ga0157372_10000025 3300013307 Bacteria 195491
101 Ga0157372_10165895 3300013307 Bacteria 2554
102 Ga0157375_10002558 3300013308 Bacteria 15793
103 Ga0157375_10140922 3300013308 Bacteria 2538
104 Ga0157380_10001136 3300014326 Bacteria 17184
105 Ga0157379_10012283 3300014968 Bacteria 7480
106 Ga0163161_10040830 3300017792 Bacteria 3333
107 Ga0213876_10002032 3300021384 Bacteria 12040
108 Ga0213875_10011367 3300021388 Bacteria 4428
109 Ga0209051_1001181 3300025303 Bacteria 23641
110 Ga0209051_1004067 3300025303 Bacteria 9217
111 Ga0209051_1018822 3300025303 Bacteria 3040
112 Ga0207692_10004944 3300025898 Bacteria 5303
113 Ga0207710_10005073 3300025900 Bacteria 5699
114 Ga0207688_10001107 3300025901 Bacteria 13835
115 Ga0207688_10001483 3300025901 Bacteria 12302
116 Ga0207685_10001625 3300025905 Bacteria 4821
117 Ga0207705_10025752 3300025909 Bacteria 4196
118 Ga0207705_10036773 3300025909 Bacteria 3504
119 Ga0207707_10000264 3300025912 Bacteria 56589
120 Ga0207707_10044840 3300025912 Bacteria 3854
121 Ga0207671_10015547 3300025914 Bacteria 5952
122 Ga0207693_10000694 3300025915 Bacteria 30256
123 Ga0207693_10002045 3300025915 Bacteria 17662
124 Ga0207663_10008466 3300025916 Bacteria 5379
125 Ga0207660_10000139 3300025917 Bacteria 43716
126 Ga0207657_10061935 3300025919 Bacteria 3205
127 Ga0207652_10000837 3300025921 Bacteria 29318
128 Ga0207687_10000192 3300025927 Bacteria 41036
129 Ga0207664_10000003 3300025929 Bacteria 510966
130 Ga0207706_10003591 3300025933 Bacteria 14812
131 Ga0207706_10045518 3300025933 Bacteria 3887
132 Ga0207709_10003124 3300025935 Bacteria 9962
133 Ga0207709_10007317 3300025935 Bacteria 6154
134 Ga0207669_10000794 3300025937 Bacteria 13541
135 Ga0207704_10001730 3300025938 Bacteria 9776
136 Ga0207665_10002960 3300025939 Bacteria 11381
137 Ga0207665_10008830 3300025939 Bacteria 6620
138 Ga0207711_10005647 3300025941 Bacteria 10569
139 Ga0207689_10031406 3300025942 Bacteria 4422
140 Ga0207661_10155610 3300025944 Bacteria 1980
141 Ga0207712_10007592 3300025961 Bacteria 6852
142 Ga0207668_10001297 3300025972 Bacteria 14853
143 Ga0207640_10001367 3300025981 Bacteria 13196
144 Ga0207658_10001438 3300025986 Bacteria 18563
145 Ga0207658_10046127 3300025986 Bacteria 3181
146 Ga0207703_10002411 3300026035 Bacteria 16246
147 Ga0207678_10006766 3300026067 Bacteria 10165
148 Ga0207678_10057135 3300026067 Bacteria 3358
149 Ga0207708_10000008 3300026075 Bacteria 245837
150 Ga0207708_10000587 3300026075 Bacteria 28161
151 Ga0207648_10001309 3300026089 Bacteria 27704
152 Ga0207648_10027001 3300026089 Bacteria 5099
153 Ga0207675_100001516 3300026118 Bacteria 23283
154 Ga0207675_100015385 3300026118 Bacteria 7135
155 Ga0207675_100148006 3300026118 Bacteria 2234
156 Ga0207683_10000275 3300026121 Bacteria 46018
157 Ga0207683_10026884 3300026121 Bacteria 4971
158 Ga0268266_10049661 3300028379 Bacteria 3598
159 Ga0268265_10002946 3300028380 Bacteria 12471
160 Ga0268264_10004702 3300028381 Bacteria 11600
161 Ga0265334_10034416 3300028573 Bacteria 2010
162 Ga0265325_10015649 3300031241 Bacteria 4260
163 Ga0316575_10000819 3300031665 Bacteria 9459
164 Ga0316579_10011766 3300031691 Bacteria 3727
165 Ga0316576_10000350 3300031727 Bacteria 20732
166 Ga0316577_10004941 3300031733 Bacteria 6950
167 Ga0307518_10062751 3300031838 Bacteria 2698
168 Ga0307416_100019701 3300032002 Bacteria 4792
169 Ga0307415_100033034 3300032126 Bacteria 3355
170 Ga0316580_10023290 3300032139 Bacteria 1912
171 Ga0316596_1015943 3300033541 Bacteria 1879
172 Ga0316574_0003436 3300035398 Bacteria 8161
173 Ga0316582_0002046 3300036647 Bacteria 9289
174 Ga0316584_0005898 3300036712 Bacteria 8265
175 Ga0316584_0041688 3300036712 Bacteria 3422
176 Ga0395905_0074964 3300037471 Bacteria 3171
177 Ga0436364_0914231 3300037853 Bacteria 12278
178 Ga0395901_0244477 3300038443 Bacteria 1871
179 Ga0436365_0634291 3300039437 Bacteria 58106
180 Ga0439466_0007609 3300041411 Bacteria 4092
181 Ga0439465_0005568 3300041413 Bacteria 4013
182 Ga0466972_0004630 3300044658 Bacteria 6887
183 Ga0466972_0004774 3300044658 Bacteria 6790
184 Ga0466965_0006993 3300044683 Bacteria 5163
185 Ga0466966_0002708 3300044684 Bacteria 11624
186 Ga0466966_0009678 3300044684 Bacteria 6383
187 Ga0466966_0031825 3300044684 Bacteria 3421
188 Ga0466961_0001181 3300044693 Bacteria 16097
189 Ga0466961_0002435 3300044693 Bacteria 11547
190 Ga0466968_0004247 3300044735 Bacteria 5343
191 Ga0466960_0000304 3300044901 Bacteria 17128
192 Ga0466960_0015412 3300044901 Bacteria 3295
193 Ga0466959_0007484 3300045049 Bacteria 7665
194 Ga0466959_0014134 3300045049 Bacteria 5794
195 Ga0466959_0028561 3300045049 Bacteria 4136
196 Ga0466958_0004820 3300045836 Bacteria 7179
197 Ga0466958_0008300 3300045836 Bacteria 5752
198 Ga0466958_0057756 3300045836 Bacteria 2358
199 Ga0466967_0104066 3300045976 Bacteria 2598
200 Ga0495592_0015929 3300046454 Bacteria 5703
201 Ga0495629_0005217 3300046459 Bacteria 9729
202 Ga0495582_0013901 3300046473 Bacteria 4433
203 Ga0495662_0002369 3300046476 Bacteria 9501
204 Ga0495608_0002140 3300046511 Bacteria 14254
205 Ga0495628_0000357 3300046516 Bacteria 41718
206 Ga0495630_0005435 3300046517 Bacteria 8994
207 Ga0495666_0003209 3300046526 Bacteria 8234
208 Ga0495665_0024029 3300046531 Bacteria 3274
209 Ga0495665_0032178 3300046531 Bacteria 2805
210 Ga0495640_0013196 3300046533 Bacteria 6285
211 Ga0495640_0034814 3300046533 Bacteria 3566
212 Ga0495586_0008871 3300046535 Bacteria 5355
213 Ga0495668_0001410 3300046616 Bacteria 23408
214 Ga0495634_0002501 3300046642 Bacteria 15238
215 Ga0495588_0055574 3300046674 Bacteria 2043
216 Ga0495657_0003269 3300046675 Bacteria 13312
217 Ga0495623_0008286 3300046679 Bacteria 6762
218 Ga0495646_0000584 3300046680 Bacteria 19777
219 Ga0495613_0000308 3300046689 Bacteria 44165
220 Ga0495613_0045524 3300046689 Bacteria 3244
221 Ga0495581_0017463 3300047315 Bacteria 4168
222 Ga0495604_0000053 3300047317 Bacteria 101884
223 Ga0495674_0031494 3300047319 Bacteria 4818
224 Ga0495676_0055331 3300047321 Bacteria 3147
225 Ga0495686_0004603 3300047472 Bacteria 11242
226 Ga0495593_0014809 3300047673 Bacteria 4430
227 Ga0496101_0000046 3300048904 Bacteria 155997
228 Ga0496101_0004942 3300048904 Bacteria 8464
229 Ga0496102_0000025 3300048905 Bacteria 227201
230 Ga0496102_0000873 3300048905 Bacteria 28789
231 Ga0496103_0000022 3300048906 Bacteria 227208
232 Ga0496103_0000494 3300048906 Bacteria 32551
233 Ga0496104_0021002 3300048907 Bacteria 5991
234 Ga0496104_0080891 3300048907 Bacteria 3098
235 Ga0496105_0083546 3300048908 Bacteria 2637
236 Ga0496106_0002689 3300048909 Bacteria 13201
237 Ga0496107_0000580 3300048910 Bacteria 20406
238 Ga0496108_0000453 3300048911 Bacteria 32720
239 Ga0496108_0112402 3300048911 Bacteria 2330
240 Ga0496109_0014844 3300048912 Bacteria 6779
241 Ga0496109_0015309 3300048912 Bacteria 6680
242 Ga0496109_0021286 3300048912 Bacteria 5733
243 Ga0496109_0071769 3300048912 Bacteria 3180
244 Ga0496110_0017070 3300048913 Bacteria 6067
245 Ga0496110_0048329 3300048913 Bacteria 3729
246 Ga0496112_0003504 3300048915 Bacteria 13009
247 Ga0496113_0003388 3300048916 Bacteria 9534
248 Ga0496114_0000360 3300048917 Bacteria 33359
249 Ga0496114_0039072 3300048917 Bacteria 3927
250 Ga0496116_0000059 3300048919 Bacteria 274491
251 Ga0496117_0000055 3300048920 Bacteria 274518
252 Ga0496118_0000058 3300048921 Bacteria 227245
253 Ga0496118_0004813 3300048921 Bacteria 15749
254 Ga0496119_0000278 3300048922 Bacteria 71878
255 Ga0496120_0000384 3300048923 Bacteria 71475
256 Ga0496121_0000113 3300048924 Bacteria 181807
257 Ga0496125_0045006 3300048928 Bacteria 3721
258 Ga0496126_0034916 3300048929 Bacteria 4716
259 Ga0501034_0153466 3300049571 Bacteria 2278
260 nmdc:mga03683_30444_c1 3300050489 Bacteria 2159
261 nmdc:mga03n38_13620_c1 3300050490 Bacteria 3095
262 nmdc:mga03n38_32797_c1 3300050490 Bacteria 2204
263 nmdc:mga06z11_4128_c1 3300050494 Bacteria 5678
264 nmdc:mga07m45_2227_c1 3300050496 Bacteria 9061
265 nmdc:mga07m45_47196_c1 3300050496 Bacteria 2421
266 nmdc:mga0sz30_7826_c1 3300050516 Bacteria 4018
267 Ga0500643_000959 3300053087 Bacteria 17906
268 Ga0500614_004371 3300053123 Bacteria 2993
269 Ga0500616_0005159 3300053153 Bacteria 8968
270 Ga0500616_0017900 3300053153 Bacteria 4013
271 2523386909 2523231044 Bacteria 6434991
272 2566993546 2565956761 Bacteria 6601618
273 2644488843 2643221687 Bacteria 6500351
274 2738886999 2738541308 Bacteria 7020677
275 2739203555 2738543005 Bacteria 5278128
276 2739238249 2738543011 Bacteria 5731169
277 2808919596 2808606375 Bacteria 9466072
278 2819424832 2818991318 Bacteria 5266538
279 2819667209 2818991458 Bacteria 4794049
280 2842137492 2842134933 Bacteria 5847019
281 2842889245 2842888712 Bacteria 4279094
282 2842892407 2842888712 Bacteria 4279094
283 2857291891 2857288857 Bacteria 7189066
284 2858888787 2858882152 Bacteria 7230291
285 2858905819 2858902515 Bacteria 7086037
286 2866553713 2866552031 Bacteria 5824618
287 2869063765 2869061728 Bacteria 7112407
288 2889302207 2889300758 Bacteria 5690814
289 2904540082 2904535858 Bacteria 6308016
290 2904769381 2904765812 Bacteria 5369154
291 2904772937 2904770941 Bacteria 5580202
292 2908814239 2908811453 Bacteria 5478616
293 2919422697 2919420072 Bacteria 5390363
294 2919435050 2919432681 Bacteria 5390474
295 2922560586 2922554459 Bacteria 6683962
296 2928146096 2928142448 Bacteria 5288925
297 2939748893 2939743619 Bacteria 5762299
298 2954675852 2954673503 Bacteria 9685905
299 2954688413 2954682443 Bacteria 9862841
300 2956941119 2956939328 Bacteria 3474458
301 2956942512 2956939328 Bacteria 3474458
302 2974317049 2974315732 Bacteria 4602776
303 2984525256 2984523437 Bacteria 4508481
304 3001119586 3001119090 Bacteria 3449530
305 3001120807 3001119090 Bacteria 3449530
306 Ga0265342_10032718
307 JGI24743J22301_10004583
308 JGI24735J21928_10013971
309 JGI24749J21850_1001645
310 JGI24744J21845_10002338
311 Ga0055540_1002706
312 Ga0055540_1005160
313 Ga0058863_11745973
314 Ga0070658_10005867
315 Ga0070658_10015031
316 Ga0068869_100046905
317 Ga0070680_100000052
318 Ga0070680_100019733
319 Ga0070680_100078145
320 Ga0070682_100006963
321 Ga0068868_100004650
322 Ga0070660_100072183
323 Ga0070660_100130124
324 Ga0070689_100001922
325 Ga0070668_100005072
326 Ga0070674_100000581
327 Ga0070688_100005050
328 Ga0070688_100018288
329 Ga0070667_100014001
330 Ga0070714_100000012
331 Ga0070714_100043069
332 Ga0070711_100001079
333 Ga0070711_100027342
334 Ga0070705_100004751
335 Ga0070700_100000004
336 Ga0070700_100005401
337 Ga0070694_100011967
338 Ga0070678_100008146
339 Ga0070681_10000004
340 Ga0068867_100009541
341 Ga0070679_100000664
342 Ga0070679_100027676
343 Ga0070684_100009872
344 Ga0070684_100033750
345 Ga0068853_100012717
346 Ga0068853_100031812
347 Ga0070695_100007477
348 Ga0070696_100004718
349 Ga0070665_100037085
350 Ga0070665_100071884
351 Ga0070704_100000677
352 Ga0070704_100015278
353 Ga0068855_100008250
354 Ga0068855_100141545
355 Ga0068857_100097314
356 Ga0070702_100005596
357 Ga0070702_100023086
358 Ga0068864_100038980
359 Ga0068866_10000520
360 Ga0068861_100003598
361 Ga0068861_100021255
362 Ga0068861_100029230
363 Ga0068858_100014971
364 Ga0068860_100006908
365 Ga0068862_100004016
366 Ga0081455_10008234
367 Ga0081455_10014353
368 Ga0075365_10013853
369 Ga0075363_100000454
370 Ga0075363_100001144
371 Ga0075363_100005022
372 Ga0075363_100005711
373 Ga0075364_10002046
374 Ga0075364_10011605
375 Ga0070716_100005387
376 Ga0070712_100001110
377 Ga0070712_100054270
378 Ga0075367_10000226
379 Ga0075428_100001482
380 Ga0075431_100016513
381 Ga0068865_100004263
382 Ga0105245_10000546
383 Ga0105245_10083709
384 Ga0105247_10000268
385 Ga0114129_10291179
386 Ga0105243_10000329
387 Ga0105243_10001875
388 Ga0105241_10079143
389 Ga0105242_10001078
390 Ga0105248_10005867
391 Ga0105237_10008949
392 Ga0105237_10068406
393 Ga0105238_10146709
394 Ga0105249_10001494
395 Ga0157370_10009456
396 Ga0157370_10078283
397 Ga0157369_10005060
398 Ga0157369_10021410
399 Ga0157374_10003900
400 Ga0157374_10138495
401 Ga0157378_10000438
402 Ga0157378_10114173
403 Ga0163162_10008681
404 Ga0163162_10102579
405 Ga0157372_10000025
406 Ga0157372_10165895
407 Ga0157375_10002558
408 Ga0157375_10140922
409 Ga0157380_10001136
410 Ga0157379_10012283
411 Ga0163161_10040830
412 Ga0213876_10002032
413 Ga0213875_10011367
414 Ga0209051_1001181
415 Ga0209051_1004067
416 Ga0209051_1018822
417 Ga0207692_10004944
418 Ga0207710_10005073
419 Ga0207688_10001107
420 Ga0207688_10001483
421 Ga0207685_10001625
422 Ga0207705_10025752
423 Ga0207705_10036773
424 Ga0207707_10000264
425 Ga0207707_10044840
426 Ga0207671_10015547
427 Ga0207693_10000694
428 Ga0207693_10002045
429 Ga0207663_10008466
430 Ga0207660_10000139
431 Ga0207657_10061935
432 Ga0207652_10000837
433 Ga0207687_10000192
434 Ga0207664_10000003
435 Ga0207706_10003591
436 Ga0207706_10045518
437 Ga0207709_10003124
438 Ga0207709_10007317
439 Ga0207669_10000794
440 Ga0207704_10001730
441 Ga0207665_10002960
442 Ga0207665_10008830
443 Ga0207711_10005647
444 Ga0207689_10031406
445 Ga0207661_10155610
446 Ga0207712_10007592
447 Ga0207668_10001297
448 Ga0207640_10001367
449 Ga0207658_10001438
450 Ga0207658_10046127
451 Ga0207703_10002411
452 Ga0207678_10006766
453 Ga0207678_10057135
454 Ga0207708_10000008
455 Ga0207708_10000587
456 Ga0207648_10001309
457 Ga0207648_10027001
458 Ga0207675_100001516
459 Ga0207675_100015385
460 Ga0207675_100148006
461 Ga0207683_10000275
462 Ga0207683_10026884
463 Ga0268266_10049661
464 Ga0268265_10002946
465 Ga0268264_10004702
466 Ga0265334_10034416
467 Ga0265325_10015649
468 Ga0316575_10000819
469 Ga0316579_10011766
470 Ga0316576_10000350
471 Ga0316577_10004941
472 Ga0307518_10062751
473 Ga0307416_100019701
474 Ga0307415_100033034
475 Ga0316580_10023290
476 Ga0316596_1015943
477 Ga0316574_0003436
478 Ga0316582_0002046
479 Ga0316584_0005898
480 Ga0316584_0041688
481 Ga0395905_0074964
482 Ga0436364_0914231
483 Ga0395901_0244477
484 Ga0436365_0634291
485 Ga0439466_0007609
486 Ga0439465_0005568
487 Ga0466972_0004630
488 Ga0466972_0004774
489 Ga0466965_0006993
490 Ga0466966_0002708
491 Ga0466966_0009678
492 Ga0466966_0031825
493 Ga0466961_0001181
494 Ga0466961_0002435
495 Ga0466968_0004247
496 Ga0466960_0000304
497 Ga0466960_0015412
498 Ga0466959_0007484
499 Ga0466959_0014134
500 Ga0466959_0028561
501 Ga0466958_0004820
502 Ga0466958_0008300
503 Ga0466958_0057756
504 Ga0466967_0104066
505 Ga0495592_0015929
506 Ga0495629_0005217
507 Ga0495582_0013901
508 Ga0495662_0002369
509 Ga0495608_0002140
510 Ga0495628_0000357
511 Ga0495630_0005435
512 Ga0495666_0003209
513 Ga0495665_0024029
514 Ga0495665_0032178
515 Ga0495640_0013196
516 Ga0495640_0034814
517 Ga0495586_0008871
518 Ga0495668_0001410
519 Ga0495634_0002501
520 Ga0495588_0055574
521 Ga0495657_0003269
522 Ga0495623_0008286
523 Ga0495646_0000584
524 Ga0495613_0000308
525 Ga0495613_0045524
526 Ga0495581_0017463
527 Ga0495604_0000053
528 Ga0495674_0031494
529 Ga0495676_0055331
530 Ga0495686_0004603
531 Ga0495593_0014809
532 Ga0496101_0000046
533 Ga0496101_0004942
534 Ga0496102_0000025
535 Ga0496102_0000873
536 Ga0496103_0000022
537 Ga0496103_0000494
538 Ga0496104_0021002
539 Ga0496104_0080891
540 Ga0496105_0083546
541 Ga0496106_0002689
542 Ga0496107_0000580
543 Ga0496108_0000453
544 Ga0496108_0112402
545 Ga0496109_0014844
546 Ga0496109_0015309
547 Ga0496109_0021286
548 Ga0496109_0071769
549 Ga0496110_0017070
550 Ga0496110_0048329
551 Ga0496112_0003504
552 Ga0496113_0003388
553 Ga0496114_0000360
554 Ga0496114_0039072
555 Ga0496116_0000059
556 Ga0496117_0000055
557 Ga0496118_0000058
558 Ga0496118_0004813
559 Ga0496119_0000278
560 Ga0496120_0000384
561 Ga0496121_0000113
562 Ga0496125_0045006
563 Ga0496126_0034916
564 Ga0501034_0153466
565 nmdc:mga03683_30444_c1
566 nmdc:mga03n38_13620_c1
567 nmdc:mga03n38_32797_c1
568 nmdc:mga06z11_4128_c1
569 nmdc:mga07m45_2227_c1
570 nmdc:mga07m45_47196_c1
571 nmdc:mga0sz30_7826_c1
572 Ga0500643_000959
573 Ga0500614_004371
574 Ga0500616_0005159
575 Ga0500616_0017900
576 2523386909
577 2566993546
578 2644488843
579 2738886999
580 2739203555
581 2739238249
582 2808919596
583 2819424832
584 2819667209
585 2842137492
586 2842889245
587 2842892407
588 2857291891
589 2858888787
590 2858905819
591 2866553713
592 2869063765
593 2889302207
594 2904540082
595 2904769381
596 2904772937
597 2908814239
598 2919422697
599 2919435050
600 2922560586
601 2928146096
602 2939748893
603 2954675852
604 2954688413
605 2956941119
606 2956942512
607 2974317049
608 2984525256
609 3001119586
610 3001120807

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF23562

534

673

0.86

PF00501

AMP-binding

AMP-binding enzyme

89

497

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.8639 15 460
3t5c-assembly2.cif.gz_B crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis in different space group c2 0.8638 16 458
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.8632 16 460
3t5c-assembly2.cif.gz_B crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis in different space group c2 0.8574 16 458
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.857 16 460
ID Description Score Start End Superfamily
af_O53521_461_600_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9962 461 600 3.30.300.30
af_O53521_461_600_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9891 461 600 3.30.300.30
2d1qA01 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.9342 395 460 2.30.38.10
af_A0A0R0JS26_74_160_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9321 49 132 3.40.50.980
af_Q55CD5_90_569_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9259 30 460 3.40.50.12780
ID Description Score Start End GO Terms
AF-A0A120J1P4-F1-model_v4 deleted 0.9982 478 600
AF-A0A120J1P4-F1-model_v4 deleted 0.9822 478 600
AF-A0A4R9ELC1-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9675 1 426 GO:0004467
GO:0016020
AF-X0QLV8-F1-model_v4 Long-chain-fatty-acid-CoA ligase 0.937 31 432 GO:0004467
GO:0016020
AF-A0A4Q3LL77-F1-model_v4 Long-chain fatty acid--CoA ligase 0.934 16 111 GO:0016874

Map