F397139

General Info

Members Datasets Scaffolds Average Seq Length
303 244 154 432

Family's Representative Sequence

Representative Sequence 3300036712|Ga0316584_0063271|Ga0316584_0063271_1161_2642
Length 493
Sequence MLAILANRTYRHLFAAQVIALAGTGLMTVALALLAYDLAGADAGAVLGTALAIKMIAYVSIAPVVGDFADRLPRRAFLVTLDIVRASVALALPFVDQVWQIYVLIALLQSASAAFTPTFQATIPDILTKEEDYTRALSLSRLAYDLENLVSPTLAALLIGLFGFHWLFGGTVIGFLASAAVVLSVILPRVSGTEGAKPKRRLGKGIRIYLATPRLRGLLALNLAVATGGAMVIVNTVVLVRGILGLTDSDVALAMAAFGSGSMLAALILPRLLDRIGDRAVMLPAAAAMAVLLLGFAVITSRIATSGLWLILLVAWFLLGTCYSAAQVPTGRLLRRSAHAQDRPSLFAAQFALSHACWLVTYPLAGWLGTGAGMPLTLLTLGLVAALGTALGFVLWPAADPETITHEHPELGSDHPHLIDGGRIHSHAFVIDDLRTGRFQRDDEGAGRGPTVDLCGDRRLSRRLCIHVRLGCAADDPTPGNRIRRRACADAGA

Samples

Sample ID Description Type Environment
1 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
2 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
3 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
4 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
5 2516143018 Ensifer sp. BR816 Isolate Nodule
6 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
7 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
8 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
9 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
10 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
11 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
12 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
13 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
14 2738543004 Pseudomonas sp. GV085 Isolate Unclassified
15 2738543024 Aminobacter sp. AP02 Isolate Unclassified
16 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
17 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
18 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
19 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
20 2826581358 Pseudomonas viridiflava CDRTc14 Isolate Unclassified
21 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
22 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
23 2842849001 Pseudomonas sp. R-72008 Isolate Unclassified
24 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
25 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
26 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
27 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
28 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
29 2885334103 Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 Isolate Nodule
30 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
31 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
32 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
33 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
34 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
35 2902330777 Methylobacterium sp. 2A Isolate Unclassified
36 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
37 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
38 2916028427 Sinorhizobium meliloti USDA1613 Isolate Nodule
39 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
40 2916055098 Sinorhizobium meliloti USDA1770 Isolate Nodule
41 2916068649 Sinorhizobium meliloti USDA1220 Isolate Nodule
42 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
43 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
44 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
45 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
46 2921263974 Sinorhizobium meliloti USDA1107 Isolate Nodule
47 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
48 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
49 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
50 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
51 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
52 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
53 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
54 2924172951 Sinorhizobium meliloti USDA1626 Isolate Nodule
55 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
56 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
57 2924207177 Sinorhizobium meliloti USDA1589 Isolate Nodule
58 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
59 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
60 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
61 2924754689 Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 Isolate Nodule
62 2929144301 Pseudomonas sp. R-71838 Hybrid assembly Isolate Unclassified
63 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
64 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
65 2937042894 Sinorhizobium meliloti USDA1687 Isolate Nodule
66 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
67 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
68 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
69 2937071275 Sinorhizobium meliloti USDA1623 Isolate Nodule
70 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
71 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
72 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
73 2937126314 Sinorhizobium meliloti USDA1612 Isolate Nodule
74 2937891427 Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 Isolate Nodule
75 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
76 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
77 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
78 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
79 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
80 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
81 2957478035 Sinorhizobium meliloti USDA1171 Isolate Nodule
82 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
83 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
84 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
85 2958122699 Mesorhizobium sp. M7A.F.Ca.US.001.04.2.1 Isolate Nodule
86 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
87 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
88 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
89 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
90 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
91 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
92 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
93 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
94 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
95 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
96 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
97 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
98 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
99 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
100 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
101 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
102 2964705432 Sinorhizobium meliloti USDA1614 Isolate Nodule
103 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
104 2965062239 Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 Isolate Nodule
105 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
106 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
107 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
108 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
109 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
110 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
111 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
112 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
113 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
114 2967748971 Sinorhizobium meliloti USDA1024A Isolate Nodule
115 2967762386 Sinorhizobium meliloti USDA1397 Isolate Nodule
116 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
117 2967775926 Sinorhizobium meliloti USDA1678 Isolate Nodule
118 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
119 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
120 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
121 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
122 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
123 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
124 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
125 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
126 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
127 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
128 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
129 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
130 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
131 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
132 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
133 2970184632 Sinorhizobium meliloti USDA1593 Isolate Nodule
134 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
135 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
136 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
137 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
138 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
139 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
140 3007855910 Pseudomonas khorasanensis SWRI153 Isolate Rhizosphere
141 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
142 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
143 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
144 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
145 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
146 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
147 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
148 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
149 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
150 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
151 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
152 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
153 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
154 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
155 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
156 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
157 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
158 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
159 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
160 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
165 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
166 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
167 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
168 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
169 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
170 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
171 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
172 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
173 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
174 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
175 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
176 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
177 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
178 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
179 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
180 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
181 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
182 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
183 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
184 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
185 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
186 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
187 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
188 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
189 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
190 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
191 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
192 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
193 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
194 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
195 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
196 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
197 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
198 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
199 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
200 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
201 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
202 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
203 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
204 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
205 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
206 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
207 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
208 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
209 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
210 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
211 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
212 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
213 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
214 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
215 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
216 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
217 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
218 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
220 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
221 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
222 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
223 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
224 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
225 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
226 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
227 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
228 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
229 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
230 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
231 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
232 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
233 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
234 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
235 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
236 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
237 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
238 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
239 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
240 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
241 8004395343 Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 Isolate Nodule
242 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
243 8054285046 Pseudomonas petroselini MAFF 311096 Isolate Nodule
244 8056177738 Pseudomonas azerbaijanoccidentalis SWRI74 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 50.83
Metatranscriptomes 0
Isolates 49.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.29
Nodule 40.26
Rhizoplane 1.32
Rhizosphere 46.53
Stem 0
Stem Tuber 0
Unclassified 7.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000009 3300003203 Bacteria 109818
2 JGI25406J46586_10002117 3300003203 Bacteria 9370
3 JGI25406J46586_10002478 3300003203 Bacteria 8727
4 JGI25406J46586_10006652 3300003203 Bacteria 5312
5 JGI25404J52841_10000034 3300003659 Bacteria 11266
6 JGI25404J52841_10000086 3300003659 Bacteria 8743
7 JGI25404J52841_10002110 3300003659 Bacteria 3692
8 JGI25404J52841_10004614 3300003659 Bacteria 2806
9 Ga0055536_1000051 3300003781 Bacteria 111831
10 Ga0055530_10000042 3300003791 Bacteria 111831
11 Ga0055540_1000699 3300003792 Bacteria 23145
12 Ga0070675_100169585 3300005354 Bacteria 1881
13 Ga0068864_100091615 3300005618 Bacteria 2682
14 Ga0081455_10025993 3300005937 Bacteria 5394
15 Ga0081455_10057085 3300005937 Bacteria 3310
16 Ga0081540_1000085 3300005983 Bacteria 99716
17 Ga0081540_1000253 3300005983 Bacteria 56400
18 Ga0081540_1000518 3300005983 Bacteria 37819
19 Ga0081540_1003785 3300005983 Bacteria 11838
20 Ga0081540_1004010 3300005983 Bacteria 11404
21 Ga0081540_1004375 3300005983 Bacteria 10801
22 Ga0081540_1008214 3300005983 Bacteria 7311
23 Ga0081540_1009743 3300005983 Bacteria 6585
24 Ga0081540_1010219 3300005983 Bacteria 6374
25 Ga0081540_1010793 3300005983 Bacteria 6141
26 Ga0081540_1011956 3300005983 Bacteria 5757
27 Ga0081540_1015766 3300005983 Bacteria 4767
28 Ga0081540_1016416 3300005983 Bacteria 4636
29 Ga0081540_1018560 3300005983 Bacteria 4260
30 Ga0081540_1027241 3300005983 Bacteria 3243
31 Ga0081539_10000048 3300005985 Bacteria 272906
32 Ga0081539_10000640 3300005985 Bacteria 70720
33 Ga0081539_10000676 3300005985 Bacteria 68392
34 Ga0081539_10000954 3300005985 Bacteria 54181
35 Ga0081539_10002114 3300005985 Bacteria 29421
36 Ga0081539_10006305 3300005985 Bacteria 11457
37 Ga0081539_10009533 3300005985 Bacteria 8084
38 Ga0081539_10010356 3300005985 Bacteria 7589
39 Ga0081539_10013106 3300005985 Bacteria 6286
40 Ga0081539_10028861 3300005985 Bacteria 3482
41 Ga0075364_10033693 3300006051 Bacteria 3299
42 Ga0075432_10013002 3300006058 Bacteria 2829
43 Ga0105244_10028732 3300009036 Bacteria 2980
44 Ga0105240_10021683 3300009093 Bacteria 8541
45 Ga0157380_10012959 3300014326 Bacteria 6060
46 Ga0209676_1000147 3300025292 Bacteria 172386
47 Ga0209050_1000220 3300025298 Bacteria 128144
48 Ga0207426_1015842 3300025302 Bacteria 2725
49 Ga0209051_1000157 3300025303 Bacteria 128123
50 Ga0207695_10021838 3300025913 Bacteria 7289
51 Ga0207659_10140676 3300025926 Bacteria 1873
52 Ga0207706_10108671 3300025933 Bacteria 2440
53 Ga0207712_10122273 3300025961 Bacteria 1971
54 Ga0209970_1001972 3300027614 Bacteria 3529
55 Ga0265332_10000077 3300031238 Bacteria 84198
56 Ga0307408_100001956 3300031548 Bacteria 14901
57 Ga0307408_100004664 3300031548 Bacteria 9264
58 Ga0307508_10004001 3300031616 Bacteria 14601
59 Ga0307413_10016822 3300031824 Bacteria 3792
60 Ga0307410_10023335 3300031852 Bacteria 3843
61 Ga0307406_10024279 3300031901 Bacteria 3619
62 Ga0307412_10000366 3300031911 Bacteria 28099
63 Ga0307412_10000442 3300031911 Bacteria 25120
64 Ga0307412_10002628 3300031911 Bacteria 9977
65 Ga0307409_100095410 3300031995 Bacteria 2450
66 Ga0307416_100056533 3300032002 Bacteria 3167
67 Ga0307414_10001259 3300032004 Bacteria 13077
68 Ga0307414_10036330 3300032004 Bacteria 3288
69 Ga0307414_10037597 3300032004 Bacteria 3243
70 Ga0307414_10047676 3300032004 Bacteria 2950
71 Ga0307414_10221670 3300032004 Bacteria 1553
72 Ga0307414_10241121 3300032004 Bacteria 1497
73 Ga0307415_100032392 3300032126 Bacteria 3379
74 Ga0373927_0085561 3300035695 Bacteria 2046
75 Ga0316584_0063271 3300036712 Bacteria 2770
76 Ga0495603_0064266 3300046455 Bacteria 2164
77 Ga0495591_004718 3300046458 Bacteria 6539
78 Ga0495650_0013669 3300046471 Bacteria 4279
79 Ga0495605_0000002 3300046474 Bacteria 522417
80 Ga0495594_0001878 3300046499 Bacteria 10931
81 Ga0495583_0000012 3300046506 Bacteria 324839
82 Ga0495610_0016769 3300046512 Bacteria 4203
83 Ga0495616_0092564 3300046513 Bacteria 1429
84 Ga0495620_0000010 3300046515 Bacteria 173604
85 Ga0495637_0000835 3300046520 Bacteria 20364
86 Ga0495637_0018583 3300046520 Bacteria 3223
87 Ga0495648_0001681 3300046524 Bacteria 21399
88 Ga0495654_0000312 3300046530 Bacteria 42611
89 Ga0495654_0000517 3300046530 Bacteria 31432
90 Ga0495654_0000820 3300046530 Bacteria 23667
91 Ga0495609_0000008 3300046538 Bacteria 383025
92 Ga0495609_0012226 3300046538 Bacteria 4071
93 Ga0495597_0002444 3300046542 Bacteria 11783
94 Ga0495597_0048899 3300046542 Bacteria 1870
95 Ga0495633_0000009 3300046558 Bacteria 293183
96 Ga0495611_0007217 3300046648 Bacteria 4721
97 Ga0495661_0000029 3300046665 Bacteria 173899
98 Ga0495671_0014168 3300046692 Bacteria 4296
99 Ga0495649_0004303 3300046694 Bacteria 9342
100 Ga0495589_0000964 3300046794 Bacteria 17574
101 Ga0495660_0000593 3300046810 Bacteria 28734
102 Ga0495683_0000042 3300047323 Bacteria 137528
103 Ga0495679_000060 3300047446 Bacteria 109240
104 Ga0495673_0000056 3300047469 Bacteria 245918
105 Ga0495673_0007524 3300047469 Bacteria 6243
106 Ga0495673_0034798 3300047469 Bacteria 2327
107 Ga0495681_0027608 3300047470 Bacteria 2933
108 Ga0495681_0030464 3300047470 Bacteria 2746
109 Ga0496104_0000284 3300048907 Bacteria 44754
110 Ga0496105_0054832 3300048908 Bacteria 3291
111 Ga0496108_0088597 3300048911 Bacteria 2630
112 Ga0496115_0073401 3300048918 Bacteria 2777
113 Ga0496122_0087869 3300048925 Bacteria 2133
114 Ga0496123_0029880 3300048926 Bacteria 4000
115 Ga0495678_000011 3300049459 Bacteria 335512
116 Ga0501031_0000262 3300049568 Bacteria 29664
117 Ga0501031_0030815 3300049568 Bacteria 3498
118 Ga0501032_0002973 3300049569 Bacteria 13155
119 Ga0501032_0003627 3300049569 Bacteria 11747
120 Ga0501032_0068783 3300049569 Bacteria 2363
121 Ga0501033_0000209 3300049570 Bacteria 55990
122 Ga0501034_0001224 3300049571 Bacteria 35098
123 Ga0501034_0001436 3300049571 Bacteria 31741
124 Ga0501034_0007355 3300049571 Bacteria 11727
125 Ga0501034_0008366 3300049571 Bacteria 10940
126 Ga0501036_0000023 3300049572 Bacteria 111054
127 Ga0501037_0001747 3300049573 Bacteria 15776
128 Ga0501037_0012133 3300049573 Bacteria 6344
129 Ga0501038_0000021 3300049574 Bacteria 151672
130 Ga0501038_0003583 3300049574 Bacteria 14450
131 Ga0501039_0000026 3300049575 Bacteria 150606
132 Ga0501039_0000119 3300049575 Bacteria 54295
133 Ga0501040_0000562 3300049576 Bacteria 22505
134 Ga0501043_0000520 3300049579 Bacteria 34650
135 Ga0501043_0000876 3300049579 Bacteria 26695
136 Ga0501046_0101027 3300049580 Bacteria 2213
137 Ga0501047_0000416 3300049581 Bacteria 47570
138 Ga0501070_0069269 3300049586 Bacteria 2921
139 Ga0501217_006862 3300049661 Bacteria 2430
140 Ga0501239_001415 3300049672 Bacteria 2049
141 Ga0501249_002164 3300049679 Bacteria 4003
142 Ga0501221_010450 3300049704 Bacteria 1649
143 Ga0501267_003424 3300049764 Bacteria 1445
144 Ga0501270_000470 3300049767 Bacteria 3443
145 Ga0501280_003188 3300049776 Bacteria 2557
146 Ga0501035_0000260 3300049822 Bacteria 62703
147 Ga0501035_0000354 3300049822 Bacteria 52821
148 Ga0501044_0000094 3300049823 Bacteria 109728
149 Ga0501226_001916 3300049853 Bacteria 2603
150 Ga0500595_000675 3300053119 Bacteria 20431
151 Ga0500568_0013911 3300053139 Bacteria 3653
152 Ga0500568_0017260 3300053139 Bacteria 3190
153 Ga0500622_0008727 3300053156 Bacteria 5654
154 Ga0500636_0003031 3300053177 Bacteria 9417

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046538 Ga0495609_0012226 Ga0495609_0012226_68_1156 353
2 3300005983 Ga0081540_1000253 Ga0081540_100025340 371
3 iso_pu_bacteria 2957388812 2957394478 382
4 3300049569 Ga0501032_0068783 Ga0501032_0068783_535_1842 391
5 3300049571 Ga0501034_0001436 Ga0501034_0001436_15910_17217 391
6 3300049672 Ga0501239_001415 Ga0501239_001415_302_1633 391
7 3300048907 Ga0496104_0000284 Ga0496104_0000284_41330_42658 392
8 3300048908 Ga0496105_0054832 Ga0496105_0054832_471_1799 392
9 3300048911 Ga0496108_0088597 Ga0496108_0088597_85_1413 392
10 3300048918 Ga0496115_0073401 Ga0496115_0073401_16_1344 392
11 3300049568 Ga0501031_0000262 Ga0501031_0000262_8676_9989 393
12 3300049569 Ga0501032_0003627 Ga0501032_0003627_1757_3070 393
13 3300049570 Ga0501033_0000209 Ga0501033_0000209_44674_45987 393
14 3300049571 Ga0501034_0007355 Ga0501034_0007355_8678_9991 393
15 3300049572 Ga0501036_0000023 Ga0501036_0000023_99738_101051 393
16 3300049573 Ga0501037_0001747 Ga0501037_0001747_4460_5773 393
17 3300049574 Ga0501038_0003583 Ga0501038_0003583_4460_5773 393
18 3300049575 Ga0501039_0000119 Ga0501039_0000119_44307_45620 393
19 3300049576 Ga0501040_0000562 Ga0501040_0000562_20288_21601 393
20 3300049579 Ga0501043_0000876 Ga0501043_0000876_23832_25145 393
21 3300049580 Ga0501046_0101027 Ga0501046_0101027_595_1908 393
22 3300049581 Ga0501047_0000416 Ga0501047_0000416_235_1548 393
23 3300049586 Ga0501070_0069269 Ga0501070_0069269_1503_2816 393
24 3300049822 Ga0501035_0000260 Ga0501035_0000260_52739_54052 393
25 3300049823 Ga0501044_0000094 Ga0501044_0000094_99738_101051 393
26 3300049571 Ga0501034_0008366 Ga0501034_0008366_4916_6235 395
27 iso_pu_bacteria 2551306090 2551718330 396
28 3300031548 Ga0307408_100001956 Ga0307408_10000195613 397
29 3300046513 Ga0495616_0092564 Ga0495616_0092564_43_1371 397
30 3300046694 Ga0495649_0004303 Ga0495649_0004303_6450_7778 397
31 3300047470 Ga0495681_0030464 Ga0495681_0030464_78_1406 397
32 3300032004 Ga0307414_10037597 Ga0307414_100375973 400
33 3300046471 Ga0495650_0013669 Ga0495650_0013669_2402_3715 406
34 3300046506 Ga0495583_0000012 Ga0495583_0000012_250427_251740 406
35 3300046512 Ga0495610_0016769 Ga0495610_0016769_1765_3078 406
36 3300046558 Ga0495633_0000009 Ga0495633_0000009_163181_164494 406
37 3300047446 Ga0495679_000060 Ga0495679_000060_35400_36713 406
38 3300048925 Ga0496122_0087869 Ga0496122_0087869_277_1590 406
39 3300048926 Ga0496123_0029880 Ga0496123_0029880_1104_2417 406
40 3300031238 Ga0265332_10000077 Ga0265332_1000007710 409
41 3300003659 JGI25404J52841_10000034 JGI25404J52841_100000344 411
42 3300005983 Ga0081540_1000518 Ga0081540_10005186 411
43 3300047469 Ga0495673_0000056 Ga0495673_0000056_90675_91916 411
44 iso_pu_bacteria 2960637947 2960644905 411
45 iso_pu_bacteria 2964719344 2964726799 411
46 3300005985 Ga0081539_10013106 Ga0081539_100131062 413
47 3300049568 Ga0501031_0030815 Ga0501031_0030815_943_2262 413
48 3300049569 Ga0501032_0002973 Ga0501032_0002973_4123_5442 413
49 3300049571 Ga0501034_0001224 Ga0501034_0001224_26038_27357 413
50 3300049574 Ga0501038_0000021 Ga0501038_0000021_7733_9052 413
51 3300049575 Ga0501039_0000026 Ga0501039_0000026_7717_9036 413
52 3300049579 Ga0501043_0000520 Ga0501043_0000520_5239_6558 413
53 3300049822 Ga0501035_0000354 Ga0501035_0000354_43771_45090 413
54 3300009093 Ga0105240_10021683 Ga0105240_100216838 414
55 3300025913 Ga0207695_10021838 Ga0207695_100218382 414
56 3300025961 Ga0207712_10122273 Ga0207712_101222731 414
57 3300032004 Ga0307414_10001259 Ga0307414_1000125912 415
58 3300005983 Ga0081540_1018560 Ga0081540_10185606 417
59 3300031911 Ga0307412_10002628 Ga0307412_1000262810 417
60 3300049853 Ga0501226_001916 Ga0501226_001916_666_1973 417
61 3300005985 Ga0081539_10006305 Ga0081539_100063057 419
62 3300032004 Ga0307414_10036330 Ga0307414_100363302 419
63 3300005354 Ga0070675_100169585 Ga0070675_1001695851 420
64 3300005618 Ga0068864_100091615 Ga0068864_1000916151 420
65 3300005983 Ga0081540_1008214 Ga0081540_10082143 420
66 3300025926 Ga0207659_10140676 Ga0207659_101406762 420
67 3300025933 Ga0207706_10108671 Ga0207706_101086712 420
68 iso_pu_bacteria 2937049772 2937053902 421
69 iso_pu_bacteria 2970040964 2970045328 421
70 iso_pu_bacteria 2970116247 2970120467 421
71 iso_pu_bacteria 2977579622 2977584170 421
72 3300003659 JGI25404J52841_10000086 JGI25404J52841_100000863 423
73 3300005937 Ga0081455_10057085 Ga0081455_100570852 423
74 3300005983 Ga0081540_1003785 Ga0081540_10037853 423
75 3300005983 Ga0081540_1004010 Ga0081540_10040106 423
76 iso_pu_bacteria 2511231052 2511499944 425
77 iso_pu_bacteria 2513237086 2513588239 425
78 iso_pu_bacteria 2516143018 2516206443 425
79 iso_pu_bacteria 2551306084 2551676859 425
80 iso_pu_bacteria 2551306085 2551687924 425
81 iso_pu_bacteria 2551306093 2551744098 425
82 iso_pu_bacteria 2643221623 2644132853 425
83 iso_pu_bacteria 2643221650 2644280949 425
84 iso_pu_bacteria 2690316117 2692314657 425
85 iso_pu_bacteria 2738543004 2739201857 425
86 iso_pu_bacteria 2738543024 2739306521 425
87 iso_pu_bacteria 2751185821 2753461220 425
88 iso_pu_bacteria 2791355082 2792582880 425
89 iso_pu_bacteria 2826581358 2826586322 425
90 iso_pu_bacteria 2842849001 2842852721 425
91 iso_pu_bacteria 2847417321 2847420290 425
92 iso_pu_bacteria 2855825444 2855830602 425
93 iso_pu_bacteria 2855839649 2855845623 425
94 iso_pu_bacteria 2858800743 2858805490 425
95 iso_pu_bacteria 2885334103 2885337485 425
96 iso_pu_bacteria 2888343758 2888345707 425
97 iso_pu_bacteria 2889914905 2889918134 425
98 iso_pu_bacteria 2915993759 2915997117 425
99 iso_pu_bacteria 2916007675 2916012298 425
100 iso_pu_bacteria 2916028427 2916030572 425
101 iso_pu_bacteria 2916041962 2916048674 425
102 iso_pu_bacteria 2916055098 2916060478 425
103 iso_pu_bacteria 2916068649 2916073004 425
104 iso_pu_bacteria 2920822456 2920826954 425
105 iso_pu_bacteria 2921201388 2921205796 425
106 iso_pu_bacteria 2921244191 2921244903 425
107 iso_pu_bacteria 2921263974 2921265225 425
108 iso_pu_bacteria 2921282425 2921284355 425
109 iso_pu_bacteria 2921289301 2921293462 425
110 iso_pu_bacteria 2921296804 2921301916 425
111 iso_pu_bacteria 2924144063 2924146322 425
112 iso_pu_bacteria 2924150972 2924154495 425
113 iso_pu_bacteria 2924158325 2924164300 425
114 iso_pu_bacteria 2924165586 2924168570 425
115 iso_pu_bacteria 2924172951 2924176091 425
116 iso_pu_bacteria 2924186466 2924186503 425
117 iso_pu_bacteria 2924200457 2924202811 425
118 iso_pu_bacteria 2924207177 2924214027 425
119 iso_pu_bacteria 2924214083 2924219194 425
120 iso_pu_bacteria 2924221636 2924225286 425
121 iso_pu_bacteria 2924228884 2924230671 425
122 iso_pu_bacteria 2924754689 2924759897 425
123 iso_pu_bacteria 2929144301 2929146733 425
124 iso_pu_bacteria 2937016420 2937017936 425
125 iso_pu_bacteria 2937042894 2937045426 425
126 iso_pu_bacteria 2937056579 2937061343 425
127 iso_pu_bacteria 2937063883 2937066812 425
128 iso_pu_bacteria 2937071275 2937075960 425
129 iso_pu_bacteria 2937091812 2937094915 425
130 iso_pu_bacteria 2937098957 2937105802 425
131 iso_pu_bacteria 2937106411 2937109666 425
132 iso_pu_bacteria 2937126314 2937132045 425
133 iso_pu_bacteria 2937891427 2937896561 425
134 iso_pu_bacteria 2957422303 2957423910 425
135 iso_pu_bacteria 2957430029 2957436683 425
136 iso_pu_bacteria 2957457609 2957459315 425
137 iso_pu_bacteria 2957464669 2957465788 425
138 iso_pu_bacteria 2957471148 2957475404 425
139 iso_pu_bacteria 2957478035 2957480144 425
140 iso_pu_bacteria 2957484790 2957485034 425
141 iso_pu_bacteria 2957498199 2957503403 425
142 iso_pu_bacteria 2957505466 2957510831 425
143 iso_pu_bacteria 2960584000 2960588449 425
144 iso_pu_bacteria 2960603979 2960605183 425
145 iso_pu_bacteria 2960645483 2960646078 425
146 iso_pu_bacteria 2960652885 2960654089 425
147 iso_pu_bacteria 2964607997 2964613549 425
148 iso_pu_bacteria 2964621998 2964628625 425
149 iso_pu_bacteria 2964628898 2964635410 425
150 iso_pu_bacteria 2964643177 2964645733 425
151 iso_pu_bacteria 2964649959 2964653686 425
152 iso_pu_bacteria 2964656573 2964660678 425
153 iso_pu_bacteria 2964663802 2964664374 425
154 iso_pu_bacteria 2964670856 2964672492 425
155 iso_pu_bacteria 2964678106 2964683080 425
156 iso_pu_bacteria 2964685014 2964688909 425
157 iso_pu_bacteria 2964691889 2964692707 425
158 iso_pu_bacteria 2964705432 2964707478 425
159 iso_pu_bacteria 2965062239 2965063355 425
160 iso_pu_bacteria 2967664464 2967668056 425
161 iso_pu_bacteria 2967671571 2967678568 425
162 iso_pu_bacteria 2967678726 2967685590 425
163 iso_pu_bacteria 2967693043 2967698790 425
164 iso_pu_bacteria 2967699805 2967701298 425
165 iso_pu_bacteria 2967706974 2967710764 425
166 iso_pu_bacteria 2967714385 2967718268 425
167 iso_pu_bacteria 2967721400 2967725313 425
168 iso_pu_bacteria 2967735183 2967741924 425
169 iso_pu_bacteria 2967748971 2967751447 425
170 iso_pu_bacteria 2967762386 2967763641 425
171 iso_pu_bacteria 2967769361 2967771796 425
172 iso_pu_bacteria 2967775926 2967779741 425
173 iso_pu_bacteria 2970019648 2970024117 425
174 iso_pu_bacteria 2970033650 2970036235 425
175 iso_pu_bacteria 2970047711 2970052207 425
176 iso_pu_bacteria 2970054988 2970060233 425
177 iso_pu_bacteria 2970061556 2970064977 425
178 iso_pu_bacteria 2970068827 2970070800 425
179 iso_pu_bacteria 2970088815 2970092607 425
180 iso_pu_bacteria 2970109326 2970114340 425
181 iso_pu_bacteria 2970129317 2970135014 425
182 iso_pu_bacteria 2970136068 2970140604 425
183 iso_pu_bacteria 2970149975 2970156206 425
184 iso_pu_bacteria 2970156795 2970159919 425
185 iso_pu_bacteria 2970164137 2970168617 425
186 iso_pu_bacteria 2970184632 2970190971 425
187 iso_pu_bacteria 2970191845 2970192968 425
188 iso_pu_bacteria 2977537788 2977543908 425
189 iso_pu_bacteria 2977551784 2977557842 425
190 iso_pu_bacteria 2977558990 2977559888 425
191 iso_pu_bacteria 2977572785 2977577669 425
192 iso_pu_bacteria 3007855910 3007860415 425
193 iso_pu_bacteria 648276728 648741597 425
194 iso_pu_bacteria 651053060 651177916 425
195 iso_pu_bacteria 8002285264 8002287863 425
196 iso_pu_bacteria 8004395343 8004400801 425
197 iso_pu_bacteria 8049293176 8049293514 425
198 iso_pu_bacteria 8054285046 8054289925 425
199 iso_pu_bacteria 8056177738 8056182383 425
200 3300046458 Ga0495591_004718 Ga0495591_004718_1280_2593 427
201 3300046474 Ga0495605_0000002 Ga0495605_0000002_181043_182356 427
202 3300046499 Ga0495594_0001878 Ga0495594_0001878_6999_8312 427
203 3300046515 Ga0495620_0000010 Ga0495620_0000010_85367_86680 427
204 3300046520 Ga0495637_0018583 Ga0495637_0018583_463_1776 427
205 3300046524 Ga0495648_0001681 Ga0495648_0001681_10538_11851 427
206 3300046530 Ga0495654_0000312 Ga0495654_0000312_10702_12015 427
207 3300046538 Ga0495609_0000008 Ga0495609_0000008_142378_143691 427
208 3300046542 Ga0495597_0002444 Ga0495597_0002444_8776_10089 427
209 3300046648 Ga0495611_0007217 Ga0495611_0007217_2261_3574 427
210 3300046665 Ga0495661_0000029 Ga0495661_0000029_116415_117728 427
211 3300046692 Ga0495671_0014168 Ga0495671_0014168_2167_3480 427
212 3300046794 Ga0495589_0000964 Ga0495589_0000964_9513_10826 427
213 3300046810 Ga0495660_0000593 Ga0495660_0000593_4933_6246 427
214 3300047323 Ga0495683_0000042 Ga0495683_0000042_101688_103001 427
215 3300047469 Ga0495673_0007524 Ga0495673_0007524_1868_3181 427
216 3300047470 Ga0495681_0027608 Ga0495681_0027608_367_1680 427
217 3300049459 Ga0495678_000011 Ga0495678_000011_151341_152654 427
218 3300025302 Ga0207426_1015842 Ga0207426_10158423 428
219 3300031911 Ga0307412_10000366 Ga0307412_1000036622 428
220 3300031911 Ga0307412_10000442 Ga0307412_100004422 428
221 iso_pu_bacteria 2513237159 2514002237 428
222 iso_pu_bacteria 2513237351 2514589615 428
223 iso_pu_bacteria 2808606395 2809032500 428
224 iso_pu_bacteria 2842521101 2842525002 428
225 iso_pu_bacteria 2891048133 2891051666 428
226 iso_pu_bacteria 2919679072 2919679186 428
227 3300003203 JGI25406J46586_10006652 JGI25406J46586_100066522 429
228 3300003781 Ga0055536_1000051 Ga0055536_100005180 429
229 3300003791 Ga0055530_10000042 Ga0055530_1000004280 429
230 3300003792 Ga0055540_1000699 Ga0055540_10006993 429
231 3300005983 Ga0081540_1010793 Ga0081540_10107934 429
232 3300005983 Ga0081540_1015766 Ga0081540_10157664 429
233 3300005985 Ga0081539_10000676 Ga0081539_1000067633 429
234 3300005985 Ga0081539_10002114 Ga0081539_100021143 429
235 3300006051 Ga0075364_10033693 Ga0075364_100336934 429
236 3300006058 Ga0075432_10013002 Ga0075432_100130022 429
237 3300009036 Ga0105244_10028732 Ga0105244_100287324 429
238 3300025292 Ga0209676_1000147 Ga0209676_100014779 429
239 3300025298 Ga0209050_1000220 Ga0209050_100022094 429
240 3300025303 Ga0209051_1000157 Ga0209051_10001574 429
241 3300027614 Ga0209970_1001972 Ga0209970_10019724 429
242 3300031548 Ga0307408_100004664 Ga0307408_1000046642 429
243 3300031824 Ga0307413_10016822 Ga0307413_100168223 429
244 3300031852 Ga0307410_10023335 Ga0307410_100233351 429
245 3300031901 Ga0307406_10024279 Ga0307406_100242792 429
246 3300031995 Ga0307409_100095410 Ga0307409_1000954103 429
247 3300032002 Ga0307416_100056533 Ga0307416_1000565333 429
248 3300032004 Ga0307414_10047676 Ga0307414_100476762 429
249 3300032004 Ga0307414_10221670 Ga0307414_102216702 429
250 3300046520 Ga0495637_0000835 Ga0495637_0000835_1779_3095 429
251 3300046530 Ga0495654_0000517 Ga0495654_0000517_24595_25905 429
252 3300046530 Ga0495654_0000820 Ga0495654_0000820_18237_19553 429
253 3300046542 Ga0495597_0048899 Ga0495597_0048899_358_1674 429
254 3300049573 Ga0501037_0012133 Ga0501037_0012133_5018_6322 429
255 3300049661 Ga0501217_006862 Ga0501217_006862_1064_2377 429
256 3300049679 Ga0501249_002164 Ga0501249_002164_2630_3943 429
257 3300049704 Ga0501221_010450 Ga0501221_010450_32_1345 429
258 3300049764 Ga0501267_003424 Ga0501267_003424_57_1370 429
259 3300049767 Ga0501270_000470 Ga0501270_000470_46_1359 429
260 3300049776 Ga0501280_003188 Ga0501280_003188_257_1576 429
261 3300053139 Ga0500568_0017260 Ga0500568_0017260_513_1829 429
262 iso_pu_bacteria 2958122699 2958126775 429
263 3300003203 JGI25406J46586_10002117 JGI25406J46586_100021173 430
264 3300005985 Ga0081539_10000640 Ga0081539_1000064089 430
265 3300005983 Ga0081540_1009743 Ga0081540_10097436 433
266 3300014326 Ga0157380_10012959 Ga0157380_100129591 433
267 iso_pu_bacteria 2861691609 2861695323 433
268 iso_pu_bacteria 2889306138 2889309795 433
269 iso_pu_bacteria 2902330777 2902331059 433
270 3300003203 JGI25406J46586_10002478 JGI25406J46586_100024783 434
271 3300005985 Ga0081539_10000954 Ga0081539_1000095447 434
272 3300053177 Ga0500636_0003031 Ga0500636_0003031_7074_8444 434
273 iso_pu_bacteria 2595698237 2596374250 434
274 iso_pu_bacteria 2775506901 2776259646 434
275 iso_pu_bacteria 2835312727 2835319639 434
276 iso_pu_bacteria 2894232714 2894240063 434
277 iso_pu_bacteria 2902330777 2902333157 434
278 iso_pu_bacteria 643348564 643599977 434
279 3300035695 Ga0373927_0085561 Ga0373927_0085561_460_1797 436
280 3300036712 Ga0316584_0063271 Ga0316584_0063271_1161_2642 436
281 3300046455 Ga0495603_0064266 Ga0495603_0064266_161_1498 436
282 iso_pu_bacteria 2935760218 2935767998 436
283 3300032126 Ga0307415_100032392 Ga0307415_1000323922 437
284 3300053139 Ga0500568_0013911 Ga0500568_0013911_1242_2630 437
285 3300053156 Ga0500622_0008727 Ga0500622_0008727_2029_3417 437
286 3300005983 Ga0081540_1010219 Ga0081540_10102195 438
287 3300032004 Ga0307414_10241121 Ga0307414_102411211 438
288 3300003659 JGI25404J52841_10002110 JGI25404J52841_100021102 439
289 3300003659 JGI25404J52841_10004614 JGI25404J52841_100046142 439
290 3300005937 Ga0081455_10025993 Ga0081455_100259933 439
291 3300005983 Ga0081540_1000085 Ga0081540_100008592 439
292 3300005983 Ga0081540_1004375 Ga0081540_10043752 439
293 3300005983 Ga0081540_1011956 Ga0081540_10119561 439
294 3300005983 Ga0081540_1016416 Ga0081540_10164162 439
295 3300005983 Ga0081540_1027241 Ga0081540_10272412 439
296 3300005985 Ga0081539_10010356 Ga0081539_100103562 439
297 3300005985 Ga0081539_10028861 Ga0081539_100288613 439
298 3300053119 Ga0500595_000675 Ga0500595_000675_13198_14541 439
299 3300003203 JGI25406J46586_10000009 JGI25406J46586_1000000920 443
300 3300005985 Ga0081539_10000048 Ga0081539_10000048130 443
301 3300005985 Ga0081539_10009533 Ga0081539_100095335 443
302 3300031616 Ga0307508_10004001 Ga0307508_100040013 443
303 3300047469 Ga0495673_0034798 Ga0495673_0034798_598_1932 443

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

218

436

0.88

PF05977

MFS_3

Transmembrane secretion effector

1

341

0.82

PF07690

MFS_1

Major Facilitator Superfamily

13

238

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.8258 9 400
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.815 9 405
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.8134 9 400
6vs2-assembly1.cif.gz_A protein d 0.8113 8 400
8jtc-assembly1.cif.gz_A human vmat2 complex with reserpine 0.809 8 400
ID Description Score Start End Superfamily
af_P54219_107_289_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8854 46 193 1.20.1250.20
af_O74852_14_230_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8798 8 189 1.20.1250.20
af_Q2G1N0_215_401_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8793 10 184 1.20.1250.20
af_Q54XU7_308_497_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.879 9 185 1.20.1250.20
af_P25744_212_408_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.878 8 192 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A7C2E0I3-F1-model_v4 MFS transporter 0.9062 8 189 GO:0016020
GO:0022857
AF-A0A537GNE8-F1-model_v4 MFS transporter 0.896 8 199 GO:0016020
GO:0022857
AF-A0A0T2I9N3-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.8955 3 403 GO:0005886
GO:0022857
AF-A0A2S6U5E8-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.8934 2 401 GO:0005886
GO:0022857
AF-A0A7U1BQB3-F1-model_v4 deleted 0.8908 7 398

Feature Viewer

pLDDT pTM Quality
87.32 0.85 High
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Predicted Structure (AlphaFold2)

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