F396771

General Info

Members Datasets Scaffolds Average Seq Length
302 229 604 461

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2863404153|2863411411
Length 550
Sequence AAPTSPAPPPAGPRRATPDPGSASASTSDAASAPAPAPVTVTGWGRTAPSAARLIRPRTYEEAAAAVRACGAQGARGGIARGLGRAYGDAAQNAGGAVLDMTGLDRVHAIDADGGTVLCDAGVSLHRLMEVLLPLGWFVPVTPGTRQVTVGGAIAADIHGKNHHVSGAFARHVLSLDLLTADGEIRTVVPGTPLFDATAGGMGLTGVILTATVRLLPVETSWMCVDTERARDLDDLLARLTATDRYYRYSVAWIDLLAKGSATGRAVLTRGDHAPLEALETRWRGNAGRESAWTQPSGTPWTPASGSPWTPPSGAPWTPPSGVPPVSSTRARAGRLALGDALRFRRGAPVGPLEFRTPRLPAAPSFVPDGLLGRTAVGLFNELWYRRAPRSRTDELQRISTFFHPLDGVPHWNRIYGRSGFVQYQFVVGHGREETLRRIVHRISARRCPSFLAVLKRFGEGDPGWLSFPMPGWTLALDIPASLPGLGAFLDSLDEEVAAAAGRVYLAKDARLRPELLAAMYPRLPEFRALREELDPRGVFVSDLARRLDL

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
12 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
68 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
71 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
84 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
88 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
89 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
90 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
91 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
92 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
93 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
94 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
95 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
96 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
97 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
98 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
102 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
103 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
106 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
107 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
108 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
109 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
110 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
111 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
112 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
119 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
120 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
126 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
129 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
133 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
134 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
135 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
142 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
143 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
170 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
171 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
172 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
173 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
177 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
183 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
184 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
185 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
186 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
187 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
188 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
189 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
192 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
193 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
194 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
195 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
196 2643221615 Nocardioides sp. Root224 Isolate Unclassified
197 2643221647 Streptomyces sp. Root369 Isolate Unclassified
198 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
199 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
200 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
201 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
202 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
203 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
204 2808606448 Streptomyces sp. 193411 Isolate Unclassified
205 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
206 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
207 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
208 2867428634 Streptomyces sp. RP5T Isolate Unclassified
209 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
210 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
211 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
212 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
213 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
214 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
215 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
216 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
217 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
218 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
219 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
220 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
221 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
222 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
223 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
224 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
225 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
226 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
227 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
228 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
229 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.42
Metatranscriptomes 0
Isolates 12.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.97
Nodule 0.66
Rhizoplane 7.62
Rhizosphere 79.14
Stem 0
Stem Tuber 0
Unclassified 1.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10009101 3300003203 Bacteria 4458
2 Ga0070683_100090964 3300005329 Bacteria 2865
3 Ga0070660_100042227 3300005339 Bacteria 3480
4 Ga0070674_100081459 3300005356 Bacteria 2313
5 Ga0070659_100006606 3300005366 Bacteria 8378
6 Ga0070709_10000561 3300005434 Bacteria 21699
7 Ga0070714_100004079 3300005435 Bacteria 10977
8 Ga0070713_100013701 3300005436 Bacteria 5994
9 Ga0070662_100024036 3300005457 Bacteria 4193
10 Ga0068867_100133725 3300005459 Bacteria 1930
11 Ga0068863_100043598 3300005841 Bacteria 4258
12 Ga0068860_100294671 3300005843 Bacteria 1588
13 Ga0081455_10000960 3300005937 Bacteria 36843
14 Ga0081455_10015441 3300005937 Bacteria 7420
15 Ga0081455_10039180 3300005937 Bacteria 4191
16 Ga0081455_10096161 3300005937 Bacteria 2389
17 Ga0081538_10000350 3300005981 Bacteria 52656
18 Ga0081538_10037698 3300005981 Bacteria 3130
19 Ga0081539_10000208 3300005985 Bacteria 136941
20 Ga0081539_10018363 3300005985 Bacteria 4858
21 Ga0075365_10009411 3300006038 Bacteria 5614
22 Ga0075368_10001436 3300006042 Bacteria 7617
23 Ga0075363_100003896 3300006048 Bacteria 6438
24 Ga0075363_100012717 3300006048 Bacteria 4062
25 Ga0075364_10010959 3300006051 Bacteria 5496
26 Ga0075432_10000656 3300006058 Bacteria 10582
27 Ga0075432_10002493 3300006058 Bacteria 6118
28 Ga0075367_10037532 3300006178 Bacteria 2816
29 Ga0075367_10070037 3300006178 Bacteria 2107
30 Ga0075370_10044236 3300006353 Bacteria 2517
31 Ga0075428_100003868 3300006844 Bacteria 16449
32 Ga0075431_100005313 3300006847 Bacteria 12699
33 Ga0075433_10012690 3300006852 Bacteria 6818
34 Ga0075433_10031857 3300006852 Bacteria 4511
35 Ga0075434_100002464 3300006871 Bacteria 16286
36 Ga0075434_100009840 3300006871 Bacteria 8940
37 Ga0075429_100209978 3300006880 Bacteria 1706
38 Ga0068865_100025998 3300006881 Bacteria 3855
39 Ga0075436_100010325 3300006914 Bacteria 6397
40 Ga0075435_100185498 3300007076 Bacteria 1759
41 Ga0105240_10168589 3300009093 Bacteria 2595
42 Ga0111539_10001067 3300009094 Bacteria 36168
43 Ga0111539_10002580 3300009094 Bacteria 23985
44 Ga0105245_10012554 3300009098 Bacteria 7372
45 Ga0105245_10112235 3300009098 Bacteria 2536
46 Ga0114129_10004878 3300009147 Bacteria 18928
47 Ga0114129_10529090 3300009147 Bacteria 1536
48 Ga0105243_10011698 3300009148 Bacteria 6638
49 Ga0105243_10021455 3300009148 Bacteria 4903
50 Ga0105242_10014383 3300009176 Bacteria 6130
51 Ga0105242_10041923 3300009176 Bacteria 3694
52 Ga0105242_10156940 3300009176 Bacteria 1988
53 Ga0105238_10093414 3300009551 Bacteria 2996
54 Ga0105249_10020582 3300009553 Bacteria 5899
55 Ga0105249_10175139 3300009553 Bacteria 2083
56 Ga0105239_10085231 3300010375 Bacteria 3481
57 Ga0105239_10112644 3300010375 Bacteria 3016
58 Ga0163162_10039313 3300013306 Bacteria 4727
59 Ga0157372_10173645 3300013307 Bacteria 2494
60 Ga0157375_10153432 3300013308 Bacteria 2440
61 Ga0157380_10075821 3300014326 Bacteria 2734
62 Ga0157379_10107317 3300014968 Bacteria 2507
63 Ga0207642_10043075 3300025899 Bacteria 1988
64 Ga0207688_10041216 3300025901 Bacteria 2568
65 Ga0207699_10000025 3300025906 Bacteria 166197
66 Ga0207645_10128758 3300025907 Bacteria 1647
67 Ga0207657_10053808 3300025919 Bacteria 3484
68 Ga0207649_10081150 3300025920 Bacteria 2099
69 Ga0207694_10071523 3300025924 Bacteria 2711
70 Ga0207700_10009912 3300025928 Bacteria 5979
71 Ga0207664_10156937 3300025929 Bacteria 1938
72 Ga0207706_10013964 3300025933 Bacteria 7282
73 Ga0207686_10036566 3300025934 Bacteria 2957
74 Ga0207709_10044571 3300025935 Bacteria 2681
75 Ga0207704_10044280 3300025938 Bacteria 2636
76 Ga0207691_10096105 3300025940 Bacteria 2649
77 Ga0207668_10143715 3300025972 Bacteria 1838
78 Ga0207641_10110849 3300026088 Bacteria 2433
79 Ga0207648_10084300 3300026089 Bacteria 2772
80 Ga0207675_100012534 3300026118 Bacteria 7919
81 Ga0207428_10002324 3300027907 Bacteria 19038
82 Ga0207428_10005586 3300027907 Bacteria 11694
83 Ga0268264_10047577 3300028381 Bacteria 3566
84 Ga0268264_10079738 3300028381 Bacteria 2794
85 Ga0307515_10147248 3300028794 Bacteria 2486
86 Ga0265338_10109706 3300028800 Bacteria 2226
87 Ga0268256_1016409 3300030500 Bacteria 2125
88 Ga0307512_10092864 3300030522 Bacteria 2091
89 Ga0265327_10006643 3300031251 Bacteria 9187
90 Ga0265327_10006701 3300031251 Bacteria 9118
91 Ga0265327_10059552 3300031251 Bacteria 1955
92 Ga0307514_10004286 3300031649 Bacteria 13175
93 Ga0316576_10038053 3300031727 Bacteria 3447
94 Ga0316576_10088934 3300031727 Bacteria 2300
95 Ga0307405_10015884 3300031731 Bacteria 4091
96 Ga0307413_10005578 3300031824 Bacteria 5637
97 Ga0307410_10000323 3300031852 Bacteria 18618
98 Ga0307410_10007648 3300031852 Bacteria 5928
99 Ga0307406_10001419 3300031901 Bacteria 13274
100 Ga0307406_10008727 3300031901 Bacteria 5664
101 Ga0307407_10004733 3300031903 Bacteria 5819
102 Ga0307407_10015268 3300031903 Bacteria 3790
103 Ga0307407_10020788 3300031903 Bacteria 3370
104 Ga0307407_10027851 3300031903 Bacteria 3013
105 Ga0307412_10007342 3300031911 Bacteria 6249
106 Ga0307409_100016836 3300031995 Bacteria 4852
107 Ga0307409_100028131 3300031995 Bacteria 3998
108 Ga0307409_100032858 3300031995 Bacteria 3768
109 Ga0307409_100098615 3300031995 Bacteria 2417
110 Ga0307409_100207583 3300031995 Bacteria 1758
111 Ga0307416_100000046 3300032002 Bacteria 120916
112 Ga0307416_100011055 3300032002 Bacteria 5998
113 Ga0307416_100182617 3300032002 Unclassified 1968
114 Ga0307414_10004676 3300032004 Bacteria 7462
115 Ga0307411_10000436 3300032005 Bacteria 14249
116 Ga0307411_10088797 3300032005 Bacteria 2151
117 Ga0307415_100000401 3300032126 Bacteria 18454
118 Ga0307415_100183269 3300032126 Bacteria 1645
119 Ga0307510_10083953 3300033180 Bacteria 3071
120 Ga0373956_0012878 3300035119 Bacteria 3473
121 Ga0395898_0034950 3300037466 Bacteria 5002
122 Ga0436365_1354751 3300039437 Bacteria 4052
123 Ga0451789_0876721 3300041443 Bacteria 2088
124 Ga0451793_1659559 3300041452 Bacteria 2251
125 Ga0439448_0007754 3300042005 Bacteria 3118
126 Ga0439450_015913 3300042008 Bacteria 1548
127 Ga0439455_0016466 3300042012 Unclassified 1710
128 Ga0439457_000113 3300042014 Bacteria 19336
129 Ga0439463_000935 3300042016 Bacteria 8012
130 Ga0450903_000262 3300042138 Bacteria 11591
131 Ga0439458_0000248 3300042157 Bacteria 13086
132 Ga0439459_0009077 3300042438 Bacteria 1714
133 Ga0439440_0002422 3300042993 Bacteria 3529
134 Ga0439440_0008106 3300042993 Bacteria 2150
135 Ga0466972_0038199 3300044658 Bacteria 2345
136 Ga0466966_0044251 3300044684 Bacteria 2851
137 Ga0466961_0032879 3300044693 Bacteria 3332
138 Ga0466963_0008050 3300044694 Bacteria 6310
139 Ga0466971_0008287 3300044719 Bacteria 4534
140 Ga0466960_0014929 3300044901 Bacteria 3338
141 Ga0466959_0052855 3300045049 Bacteria 2973
142 Ga0466959_0105543 3300045049 Bacteria 2014
143 Ga0495653_0051899 3300046463 Bacteria 3146
144 Ga0495605_0026656 3300046474 Bacteria 3002
145 Ga0495662_0000799 3300046476 Bacteria 15271
146 Ga0495662_0120045 3300046476 Bacteria 1290
147 Ga0495664_0007713 3300046477 Bacteria 5987
148 Ga0495596_0041854 3300046500 Bacteria 1806
149 Ga0495583_0021182 3300046506 Bacteria 3349
150 Ga0495620_0012581 3300046515 Bacteria 4362
151 Ga0495628_0001869 3300046516 Bacteria 19120
152 Ga0495628_0040190 3300046516 Bacteria 3738
153 Ga0495628_0194314 3300046516 Bacteria 1531
154 Ga0495630_0015070 3300046517 Bacteria 5640
155 Ga0495643_0002876 3300046522 Bacteria 13064
156 Ga0495648_0027118 3300046524 Bacteria 3841
157 Ga0495666_0035687 3300046526 Bacteria 2422
158 Ga0495640_0006953 3300046533 Bacteria 8907
159 Ga0495640_0007022 3300046533 Bacteria 8863
160 Ga0495640_0008964 3300046533 Bacteria 7813
161 Ga0495640_0027132 3300046533 Bacteria 4134
162 Ga0495586_0070145 3300046535 Bacteria 1913
163 Ga0495587_0016752 3300046536 Bacteria 4558
164 Ga0495597_0038724 3300046542 Bacteria 2136
165 Ga0495645_0011155 3300046543 Bacteria 6320
166 Ga0495645_0016864 3300046543 Bacteria 5228
167 Ga0495667_0010961 3300046559 Bacteria 6125
168 Ga0495667_0019657 3300046559 Bacteria 4556
169 Ga0495667_0084621 3300046559 Bacteria 2059
170 Ga0495656_0018854 3300046615 Bacteria 2656
171 Ga0495668_0027595 3300046616 Bacteria 3217
172 Ga0495634_0002239 3300046642 Bacteria 16208
173 Ga0495611_0054193 3300046648 Bacteria 1812
174 Ga0495635_0051671 3300046663 Bacteria 2831
175 Ga0495657_0010501 3300046675 Bacteria 6967
176 Ga0495657_0016912 3300046675 Bacteria 5302
177 Ga0495623_0018493 3300046679 Bacteria 4501
178 Ga0495658_0002836 3300046683 Bacteria 8706
179 Ga0495613_0007627 3300046689 Bacteria 8047
180 Ga0495613_0018435 3300046689 Bacteria 5204
181 Ga0495613_0043706 3300046689 Bacteria 3314
182 Ga0495671_0020560 3300046692 Bacteria 3477
183 Ga0495649_0021442 3300046694 Bacteria 3619
184 Ga0495600_0079290 3300046809 Bacteria 2144
185 Ga0495581_0025265 3300047315 Bacteria 3445
186 Ga0495604_0000573 3300047317 Bacteria 32294
187 Ga0495604_0092013 3300047317 Bacteria 2248
188 Ga0495674_0042558 3300047319 Bacteria 4050
189 Ga0495674_0065869 3300047319 Bacteria 3145
190 Ga0495676_0154553 3300047321 Unclassified 1629
191 Ga0495680_0096809 3300047322 Bacteria 2204
192 Ga0495680_0168328 3300047322 Bacteria 1587
193 Ga0495687_026230 3300047443 Bacteria 2747
194 Ga0495687_032663 3300047443 Bacteria 2372
195 Ga0495675_0003014 3300047444 Bacteria 10114
196 Ga0495685_001084 3300047447 Bacteria 8288
197 Ga0495684_0001736 3300047471 Bacteria 17532
198 Ga0495684_0011087 3300047471 Bacteria 6967
199 Ga0495593_0015901 3300047673 Bacteria 4251
200 Ga0495626_0056188 3300048091 Bacteria 1803
201 Ga0496102_0032639 3300048905 Bacteria 4678
202 Ga0496102_0051364 3300048905 Bacteria 3756
203 Ga0496103_0060143 3300048906 Bacteria 2361
204 Ga0496104_0016744 3300048907 Bacteria 6665
205 Ga0496104_0147714 3300048907 Bacteria 2257
206 Ga0496105_0061664 3300048908 Bacteria 3095
207 Ga0496105_0088322 3300048908 Bacteria 2561
208 Ga0496105_0089770 3300048908 Bacteria 2539
209 Ga0496108_0027907 3300048911 Bacteria 4667
210 Ga0496109_0071432 3300048912 Bacteria 3187
211 Ga0496109_0074468 3300048912 Bacteria 3121
212 Ga0496109_0109796 3300048912 Bacteria 2564
213 Ga0496110_0001821 3300048913 Bacteria 15715
214 Ga0496110_0163176 3300048913 Bacteria 2020
215 Ga0496111_0023160 3300048914 Bacteria 4358
216 Ga0496112_0015070 3300048915 Bacteria 7198
217 Ga0496112_0189203 3300048915 Bacteria 2021
218 Ga0496114_0018258 3300048917 Bacteria 5669
219 Ga0496114_0023214 3300048917 Bacteria 5060
220 Ga0496114_0042881 3300048917 Bacteria 3751
221 Ga0496115_0003363 3300048918 Bacteria 11469
222 Ga0501031_0011702 3300049568 Bacteria 5723
223 Ga0501034_0105659 3300049571 Bacteria 2808
224 Ga0501036_0034620 3300049572 Bacteria 4273
225 Ga0501036_0087272 3300049572 Bacteria 2637
226 Ga0501037_0172862 3300049573 Bacteria 1535
227 Ga0501042_0013399 3300049578 Bacteria 5579
228 Ga0501043_0008081 3300049579 Bacteria 8302
229 Ga0501047_0000005 3300049581 Bacteria 456524
230 Ga0501047_0087896 3300049581 Bacteria 2985
231 Ga0501048_0022029 3300049582 Bacteria 4664
232 Ga0501068_0012042 3300049584 Bacteria 4894
233 Ga0501070_0010962 3300049586 Bacteria 7651
234 Ga0501072_0111671 3300049588 Bacteria 2176
235 Ga0501072_0112239 3300049588 Bacteria 2170
236 Ga0501072_0127721 3300049588 Bacteria 2026
237 Ga0501074_0061101 3300049590 Bacteria 2715
238 Ga0501075_0022534 3300049591 Bacteria 4602
239 Ga0501076_0077434 3300049592 Bacteria 2668
240 Ga0501079_0032460 3300049741 Bacteria 4014
241 Ga0501081_0149956 3300049743 Bacteria 1675
242 Ga0501271_003674 3300049768 Unclassified 1426
243 Ga0501044_0124420 3300049823 Bacteria 2577
244 Ga0501045_0046530 3300049824 Bacteria 3160
245 nmdc:mga0yw44_54671_c1 3300050492 Bacteria 2427
246 nmdc:mga0yw44_98581_c1 3300050492 Bacteria 1858
247 nmdc:mga04h51_10829_c1 3300050495 Bacteria 2516
248 nmdc:mga05p37_13488_c1 3300050507 Bacteria 9793
249 nmdc:mga06r32_11219_c1 3300050510 Bacteria 8072
250 nmdc:mga08y16_35007_c1 3300050511 Bacteria 5276
251 nmdc:mga0n895_200308_c1 3300050512 Bacteria 2028
252 nmdc:mga0n895_2309_c1 3300050512 Bacteria 14839
253 nmdc:mga08x19_7352_c1 3300050514 Bacteria 6543
254 nmdc:mga0a205_39886_c1 3300050515 Bacteria 4520
255 Ga0495601_0085225 3300053077 Bacteria 2030
256 Ga0495595_0050753 3300053084 Bacteria 1922
257 Ga0495619_0039453 3300053085 Bacteria 3083
258 Ga0495619_0052740 3300053085 Bacteria 2689
259 Ga0500566_0068592 3300053094 Bacteria 1994
260 Ga0500593_010816 3300053117 Bacteria 3838
261 Ga0500616_0000828 3300053153 Bacteria 34894
262 Ga0500616_0002830 3300053153 Bacteria 13950
263 Ga0501082_0097684 3300060353 Bacteria 2539
264 Ga0466962_0033675 3300061719 Bacteria 2452
265 2863411411 2863404153 Bacteria 9672205
266 2547411807 2547132111 Bacteria 8013147
267 2585306199 2582581313 Bacteria 10042643
268 2643941855 2643221587 Bacteria 7586415
269 2644089529 2643221615 Bacteria 5487866
270 2644261421 2643221647 Bacteria 10741251
271 2644319374 2643221657 Bacteria 5490246
272 2644428938 2643221677 Bacteria 7584031
273 2784589884 2784132148 Bacteria 8627943
274 2785341717 2784746763 Bacteria 9783172
275 2785370949 2784746768 Bacteria 10036182
276 2786672125 2786546132 Bacteria 10419719
277 2809233554 2808606448 Bacteria 8656184
278 2812375319 2811994882 Bacteria 4688362
279 2812479271 2811994917 Bacteria 7761064
280 2862392308 2862382967 Bacteria 10317375
281 2867436652 2867428634 Bacteria 9590268
282 2873154565 2873151551 Bacteria 8625867
283 2877679635 2877676314 Bacteria 9512378
284 2912718275 2912715099 Bacteria 9460473
285 2912762274 2912757875 Bacteria 7940295
286 2918505963 2918501144 Bacteria 8668083
287 2932400045 2932398195 Bacteria 3847976
288 2954384540 2954380949 Bacteria 10050426
289 2954678398 2954673503 Bacteria 9685905
290 2954685757 2954682443 Bacteria 9862841
291 2954695396 2954691527 Bacteria 10720516
292 2954710587 2954701450 Bacteria 10834262
293 2954714833 2954711539 Bacteria 10867210
294 2954724778 2954721474 Bacteria 10456478
295 2954737040 2954731030 Bacteria 10243860
296 2954755891 2954749733 Bacteria 10366972
297 2954762656 2954759201 Bacteria 9358192
298 3006498970 3006493962 Bacteria 8825450
299 8008566708 8008558824 Bacteria 10610750
300 8023631706 8023623736 Bacteria 8593882
301 8025532515 8025530807 Bacteria 8495698
302 8048413683 8048406513 Bacteria 8936924
303 JGI25406J46586_10009101
304 Ga0070683_100090964
305 Ga0070660_100042227
306 Ga0070674_100081459
307 Ga0070659_100006606
308 Ga0070709_10000561
309 Ga0070714_100004079
310 Ga0070713_100013701
311 Ga0070662_100024036
312 Ga0068867_100133725
313 Ga0068863_100043598
314 Ga0068860_100294671
315 Ga0081455_10000960
316 Ga0081455_10015441
317 Ga0081455_10039180
318 Ga0081455_10096161
319 Ga0081538_10000350
320 Ga0081538_10037698
321 Ga0081539_10000208
322 Ga0081539_10018363
323 Ga0075365_10009411
324 Ga0075368_10001436
325 Ga0075363_100003896
326 Ga0075363_100012717
327 Ga0075364_10010959
328 Ga0075432_10000656
329 Ga0075432_10002493
330 Ga0075367_10037532
331 Ga0075367_10070037
332 Ga0075370_10044236
333 Ga0075428_100003868
334 Ga0075431_100005313
335 Ga0075433_10012690
336 Ga0075433_10031857
337 Ga0075434_100002464
338 Ga0075434_100009840
339 Ga0075429_100209978
340 Ga0068865_100025998
341 Ga0075436_100010325
342 Ga0075435_100185498
343 Ga0105240_10168589
344 Ga0111539_10001067
345 Ga0111539_10002580
346 Ga0105245_10012554
347 Ga0105245_10112235
348 Ga0114129_10004878
349 Ga0114129_10529090
350 Ga0105243_10011698
351 Ga0105243_10021455
352 Ga0105242_10014383
353 Ga0105242_10041923
354 Ga0105242_10156940
355 Ga0105238_10093414
356 Ga0105249_10020582
357 Ga0105249_10175139
358 Ga0105239_10085231
359 Ga0105239_10112644
360 Ga0163162_10039313
361 Ga0157372_10173645
362 Ga0157375_10153432
363 Ga0157380_10075821
364 Ga0157379_10107317
365 Ga0207642_10043075
366 Ga0207688_10041216
367 Ga0207699_10000025
368 Ga0207645_10128758
369 Ga0207657_10053808
370 Ga0207649_10081150
371 Ga0207694_10071523
372 Ga0207700_10009912
373 Ga0207664_10156937
374 Ga0207706_10013964
375 Ga0207686_10036566
376 Ga0207709_10044571
377 Ga0207704_10044280
378 Ga0207691_10096105
379 Ga0207668_10143715
380 Ga0207641_10110849
381 Ga0207648_10084300
382 Ga0207675_100012534
383 Ga0207428_10002324
384 Ga0207428_10005586
385 Ga0268264_10047577
386 Ga0268264_10079738
387 Ga0307515_10147248
388 Ga0265338_10109706
389 Ga0268256_1016409
390 Ga0307512_10092864
391 Ga0265327_10006643
392 Ga0265327_10006701
393 Ga0265327_10059552
394 Ga0307514_10004286
395 Ga0316576_10038053
396 Ga0316576_10088934
397 Ga0307405_10015884
398 Ga0307413_10005578
399 Ga0307410_10000323
400 Ga0307410_10007648
401 Ga0307406_10001419
402 Ga0307406_10008727
403 Ga0307407_10004733
404 Ga0307407_10015268
405 Ga0307407_10020788
406 Ga0307407_10027851
407 Ga0307412_10007342
408 Ga0307409_100016836
409 Ga0307409_100028131
410 Ga0307409_100032858
411 Ga0307409_100098615
412 Ga0307409_100207583
413 Ga0307416_100000046
414 Ga0307416_100011055
415 Ga0307416_100182617
416 Ga0307414_10004676
417 Ga0307411_10000436
418 Ga0307411_10088797
419 Ga0307415_100000401
420 Ga0307415_100183269
421 Ga0307510_10083953
422 Ga0373956_0012878
423 Ga0395898_0034950
424 Ga0436365_1354751
425 Ga0451789_0876721
426 Ga0451793_1659559
427 Ga0439448_0007754
428 Ga0439450_015913
429 Ga0439455_0016466
430 Ga0439457_000113
431 Ga0439463_000935
432 Ga0450903_000262
433 Ga0439458_0000248
434 Ga0439459_0009077
435 Ga0439440_0002422
436 Ga0439440_0008106
437 Ga0466972_0038199
438 Ga0466966_0044251
439 Ga0466961_0032879
440 Ga0466963_0008050
441 Ga0466971_0008287
442 Ga0466960_0014929
443 Ga0466959_0052855
444 Ga0466959_0105543
445 Ga0495653_0051899
446 Ga0495605_0026656
447 Ga0495662_0000799
448 Ga0495662_0120045
449 Ga0495664_0007713
450 Ga0495596_0041854
451 Ga0495583_0021182
452 Ga0495620_0012581
453 Ga0495628_0001869
454 Ga0495628_0040190
455 Ga0495628_0194314
456 Ga0495630_0015070
457 Ga0495643_0002876
458 Ga0495648_0027118
459 Ga0495666_0035687
460 Ga0495640_0006953
461 Ga0495640_0007022
462 Ga0495640_0008964
463 Ga0495640_0027132
464 Ga0495586_0070145
465 Ga0495587_0016752
466 Ga0495597_0038724
467 Ga0495645_0011155
468 Ga0495645_0016864
469 Ga0495667_0010961
470 Ga0495667_0019657
471 Ga0495667_0084621
472 Ga0495656_0018854
473 Ga0495668_0027595
474 Ga0495634_0002239
475 Ga0495611_0054193
476 Ga0495635_0051671
477 Ga0495657_0010501
478 Ga0495657_0016912
479 Ga0495623_0018493
480 Ga0495658_0002836
481 Ga0495613_0007627
482 Ga0495613_0018435
483 Ga0495613_0043706
484 Ga0495671_0020560
485 Ga0495649_0021442
486 Ga0495600_0079290
487 Ga0495581_0025265
488 Ga0495604_0000573
489 Ga0495604_0092013
490 Ga0495674_0042558
491 Ga0495674_0065869
492 Ga0495676_0154553
493 Ga0495680_0096809
494 Ga0495680_0168328
495 Ga0495687_026230
496 Ga0495687_032663
497 Ga0495675_0003014
498 Ga0495685_001084
499 Ga0495684_0001736
500 Ga0495684_0011087
501 Ga0495593_0015901
502 Ga0495626_0056188
503 Ga0496102_0032639
504 Ga0496102_0051364
505 Ga0496103_0060143
506 Ga0496104_0016744
507 Ga0496104_0147714
508 Ga0496105_0061664
509 Ga0496105_0088322
510 Ga0496105_0089770
511 Ga0496108_0027907
512 Ga0496109_0071432
513 Ga0496109_0074468
514 Ga0496109_0109796
515 Ga0496110_0001821
516 Ga0496110_0163176
517 Ga0496111_0023160
518 Ga0496112_0015070
519 Ga0496112_0189203
520 Ga0496114_0018258
521 Ga0496114_0023214
522 Ga0496114_0042881
523 Ga0496115_0003363
524 Ga0501031_0011702
525 Ga0501034_0105659
526 Ga0501036_0034620
527 Ga0501036_0087272
528 Ga0501037_0172862
529 Ga0501042_0013399
530 Ga0501043_0008081
531 Ga0501047_0000005
532 Ga0501047_0087896
533 Ga0501048_0022029
534 Ga0501068_0012042
535 Ga0501070_0010962
536 Ga0501072_0111671
537 Ga0501072_0112239
538 Ga0501072_0127721
539 Ga0501074_0061101
540 Ga0501075_0022534
541 Ga0501076_0077434
542 Ga0501079_0032460
543 Ga0501081_0149956
544 Ga0501271_003674
545 Ga0501044_0124420
546 Ga0501045_0046530
547 nmdc:mga0yw44_54671_c1
548 nmdc:mga0yw44_98581_c1
549 nmdc:mga04h51_10829_c1
550 nmdc:mga05p37_13488_c1
551 nmdc:mga06r32_11219_c1
552 nmdc:mga08y16_35007_c1
553 nmdc:mga0n895_200308_c1
554 nmdc:mga0n895_2309_c1
555 nmdc:mga08x19_7352_c1
556 nmdc:mga0a205_39886_c1
557 Ga0495601_0085225
558 Ga0495595_0050753
559 Ga0495619_0039453
560 Ga0495619_0052740
561 Ga0500566_0068592
562 Ga0500593_010816
563 Ga0500616_0000828
564 Ga0500616_0002830
565 Ga0501082_0097684
566 Ga0466962_0033675
567 2863411411
568 2547411807
569 2585306199
570 2643941855
571 2644089529
572 2644261421
573 2644319374
574 2644428938
575 2784589884
576 2785341717
577 2785370949
578 2786672125
579 2809233554
580 2812375319
581 2812479271
582 2862392308
583 2867436652
584 2873154565
585 2877679635
586 2912718275
587 2912762274
588 2918505963
589 2932400045
590 2954384540
591 2954678398
592 2954685757
593 2954695396
594 2954710587
595 2954714833
596 2954724778
597 2954737040
598 2954755891
599 2954762656
600 3006498970
601 8008566708
602 8023631706
603 8025532515
604 8048413683

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01565

FAD_binding_4

FAD binding domain

51

188

0.96

PF04030

ALO

D-arabinono-1,4-lactone oxidase

430

548

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4g3u-assembly1.cif.gz_A mycobacterium smegmatis dpre1 - monoclinic crystal form 0.9587 61 451
4p8m-assembly2.cif.gz_B crystal structure of m. tuberculosis dpre1 in complex with the non-covalent inhibitor qn114 0.9563 2 451
4pfd-assembly2.cif.gz_B crystal structure of m. tuberculosis in complex with a cbt - non-covalent adduct 0.9534 2 451
4feh-assembly1.cif.gz_A mycobacterium tuberculosis dpre1 - hexagonal crystal form 0.9524 2 451
4fdo-assembly1.cif.gz_A mycobacterium tuberculosis dpre1 in complex with ct319 0.9506 2 451
ID Description Score Start End Superfamily
af_P9WJF1_85_203_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9815 75 187 3.30.465.10
af_Q2RAP0_154_280_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9328 69 184 3.30.465.10
af_P58710_75_198_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9289 69 183 3.30.465.10
af_O93852_105_221_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9269 81 186 3.30.465.10
af_P9WJF1_85_203_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9246 75 187 3.30.465.10
ID Description Score Start End GO Terms
AF-A0A7W1UT15-F1-model_v4 FAD-binding oxidoreductase 0.9809 168 451 GO:0003885
GO:0016020
AF-A0A1F3UFH4-F1-model_v4 Uncharacterized protein 0.9779 329 448
AF-A0A4Q7L879-F1-model_v4 Decaprenylphospho-beta-D-ribofuranose 2-oxidase 0.9715 2 451 GO:0003885
GO:0016020
GO:0071949
AF-A0A359IUM4-F1-model_v4 deleted 0.9715 317 451
AF-A0A654ZHZ0-F1-model_v4 deleted 0.9712 105 451

Map