F396475

General Info

Members Datasets Scaffolds Average Seq Length
302 222 259 278

Family's Representative Sequence

Representative Sequence 3300011119|Ga0105246_10123509|Ga0105246_101235092
Length 307
Sequence MKHNVNSLSYANTLPSLRKQIAAQRTKEIVMRVWFITGASRGFGALIAQEALNAGDAVVATARNPKGLEEKFGNHPNLLAVSLDVTDEASAHKATEAAVKRFGKIDILLNNAGFGLLGAVEEATTEEIEKLYATNVFGLLKVTRAVLPHMRRQRSGQVLNISSIGGYESHAGWGIYCSTKFAVEGISEALAAEVAPLGIKVTVVEPGFFRTDFLDESSLAVSPSSIADYKETPVGAMREFAAGHNHQQPGDPARFAKAMVTLAHSDNPPLRMPFGSDTVAVIEAKNAHVAKELAAWRELAVSTDFPK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2509276019 Ensifer aridi TW10 Isolate Nodule
3 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
4 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
5 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
6 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
7 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
8 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
9 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
10 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
11 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
12 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
13 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
14 2643221557 Ensifer sp. Root558 Isolate Unclassified
15 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
16 2643221599 Rhizobium sp. Root708 Isolate Unclassified
17 2643221610 Ensifer sp. Root74 Isolate Unclassified
18 2643221668 Ensifer sp. Root423 Isolate Unclassified
19 2643221675 Ensifer sp. Root1298 Isolate Unclassified
20 2643221680 Ensifer sp. Root1312 Isolate Unclassified
21 2643221723 Ensifer sp. Root278 Isolate Unclassified
22 2643221726 Ensifer sp. Root954 Isolate Unclassified
23 2643221733 Bosea sp. Root381 Isolate Unclassified
24 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
25 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
26 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
27 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
28 2855730933 Achromobacter sp. HZ28 Isolate Nodule
29 2855767633 Achromobacter sp. HZ34 Isolate Nodule
30 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
31 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
32 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
33 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
34 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
35 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
36 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
37 2996887358 Rhizobium sp. R711 Isolate Nodule
38 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
39 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
40 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
41 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
42 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
43 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
44 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
45 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
46 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
47 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
48 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
49 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
50 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
51 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
52 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
53 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
54 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
55 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
56 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
57 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
58 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
59 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
60 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
61 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
62 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
63 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
64 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
65 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
66 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
67 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
68 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
69 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
70 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
71 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
72 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
73 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
74 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
75 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
76 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
77 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
78 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
79 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
80 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
81 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
82 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
83 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
84 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
85 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
86 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
87 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
88 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
89 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
90 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
91 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
92 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
93 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
94 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
95 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
96 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
97 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
98 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
99 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
100 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
101 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
102 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
103 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
104 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
105 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
106 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
107 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
108 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
112 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
115 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
136 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
137 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
138 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
139 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
140 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
141 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
142 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
143 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
144 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
145 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
146 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
147 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
148 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
149 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
150 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
151 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
152 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
153 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
154 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
155 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
156 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
157 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
158 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
159 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
160 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
161 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
162 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
163 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
164 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
165 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
166 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
167 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
168 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
169 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
172 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
173 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
176 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
177 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
178 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
179 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
180 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
181 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
182 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
183 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
184 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
185 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
186 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
187 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
188 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
189 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
190 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
191 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
192 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
193 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
194 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
195 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
196 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
197 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
198 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
199 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
200 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
201 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
202 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
203 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
204 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
205 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
206 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
207 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
208 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
209 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
210 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
211 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
212 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
213 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
214 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
215 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
216 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
217 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
218 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
219 8005258706 Rhizobium sp. R693 Isolate Nodule
220 8005321885 Rhizobium sp. R72 Isolate Nodule
221 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
222 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.76
Metatranscriptomes 0
Isolates 14.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 33.77
Nodule 5.63
Rhizoplane 1.99
Rhizosphere 39.4
Stem 0
Stem Tuber 0
Unclassified 19.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1843357 2162886007 Bacteria 25494
2 JGI24739J22299_10000502 3300001989 Bacteria 13884
3 JGI24735J21928_10006091 3300002067 Bacteria 3981
4 JGI25152J39213_1010644 3300002773 Bacteria 2088
5 JGI25159J45721_1000011 3300002987 Bacteria 158027
6 JGI25151J46595_10000317 3300003187 Bacteria 52237
7 JGI25151J46595_10000466 3300003187 Bacteria 38669
8 JGI25151J46595_10011838 3300003187 Bacteria 3995
9 JGI25160J50197_1000007 3300003354 Bacteria 316012
10 JGI25161J50226_1000308 3300003374 Bacteria 27207
11 Ga0055526_1001144 3300003771 Bacteria 19209
12 Ga0055524_1000633 3300003775 Bacteria 25060
13 Ga0055524_1029990 3300003775 Bacteria 1595
14 Ga0055536_1000235 3300003781 Bacteria 44441
15 Ga0055536_1004070 3300003781 Bacteria 7609
16 Ga0055528_1008779 3300003790 Bacteria 4282
17 Ga0055530_10000528 3300003791 Bacteria 33195
18 Ga0055530_10014065 3300003791 Bacteria 2691
19 Ga0055540_1028314 3300003792 Bacteria 1327
20 Ga0055531_10008276 3300003794 Bacteria 5525
21 Ga0055543_1000070 3300004625 Bacteria 93528
22 Ga0065165_1000011 3300005262 Bacteria 316465
23 Ga0065704_10070144 3300005289 Bacteria 333223
24 Ga0070668_100102261 3300005347 Bacteria 2272
25 Ga0070668_100273207 3300005347 Bacteria 1409
26 Ga0070671_100019419 3300005355 Bacteria 5530
27 Ga0070671_100186771 3300005355 Bacteria 1756
28 Ga0070674_100044295 3300005356 Bacteria 3033
29 Ga0070709_10029868 3300005434 Bacteria 3264
30 Ga0070714_100113037 3300005435 Bacteria 2407
31 Ga0070713_100012297 3300005436 Bacteria 6271
32 Ga0070711_100053070 3300005439 Bacteria 2792
33 Ga0070663_100009601 3300005455 Bacteria 5998
34 Ga0068867_100008101 3300005459 Bacteria 7427
35 Ga0068867_100242129 3300005459 Unclassified 1463
36 Ga0070665_100002842 3300005548 Bacteria 18747
37 Ga0068855_100310430 3300005563 Bacteria 1745
38 Ga0068854_100015866 3300005578 Bacteria 5006
39 Ga0068864_100150285 3300005618 Bacteria 2109
40 Ga0068866_10037728 3300005718 Bacteria 2375
41 Ga0068863_100001752 3300005841 Bacteria 21531
42 Ga0068860_100000821 3300005843 Bacteria 34727
43 Ga0068860_100039765 3300005843 Bacteria 4498
44 Ga0068860_100538128 3300005843 Bacteria 1169
45 Ga0068862_100078849 3300005844 Bacteria 2854
46 Ga0075365_10125941 3300006038 Bacteria 1770
47 Ga0075363_100061608 3300006048 Bacteria 2022
48 Ga0075364_10139965 3300006051 Bacteria 1627
49 Ga0070716_100045945 3300006173 Bacteria 2455
50 Ga0070712_100306200 3300006175 Bacteria 1287
51 Ga0075367_10005711 3300006178 Bacteria 6215
52 Ga0075367_10017410 3300006178 Bacteria 3945
53 Ga0075369_10033052 3300006186 Bacteria 2191
54 Ga0075370_10064551 3300006353 Bacteria 2088
55 Ga0075430_100477150 3300006846 Bacteria 1029
56 Ga0075431_100526839 3300006847 Bacteria 1171
57 Ga0075434_100119441 3300006871 Bacteria 2650
58 Ga0075429_100408898 3300006880 Bacteria 1189
59 Ga0105240_10000389 3300009093 Bacteria 82353
60 Ga0105240_10022001 3300009093 Bacteria 8468
61 Ga0105247_10028003 3300009101 Bacteria 3407
62 Ga0105247_10035822 3300009101 Bacteria 3026
63 Ga0114129_10185067 3300009147 Bacteria 2831
64 Ga0105242_10040050 3300009176 Bacteria 3774
65 Ga0105238_10150859 3300009551 Bacteria 2299
66 Ga0105249_10038243 3300009553 Bacteria 4353
67 Ga0105239_10412062 3300010375 Bacteria 1530
68 Ga0105246_10123509 3300011119 Bacteria 1922
69 Ga0157371_10006165 3300013102 Bacteria 9950
70 Ga0157369_10600798 3300013105 Bacteria 1136
71 Ga0171463_1002 3300013249 Bacteria 1274851
72 Ga0157378_10003470 3300013297 Bacteria 13991
73 Ga0163163_10119957 3300014325 Unclassified 2663
74 Ga0183363_1014 3300015690 Bacteria 78669
75 Ga0163161_10012566 3300017792 Bacteria 5881
76 Ga0214542_1018663 3300021321 Bacteria 5776
77 Ga0214543_1000008 3300021327 Bacteria 385680
78 Ga0209436_100316 3300025208 Bacteria 22155
79 Ga0207425_1031246 3300025245 Bacteria 1062
80 Ga0209129_1002209 3300025258 Bacteria 9765
81 Ga0209673_1010001 3300025273 Bacteria 4041
82 Ga0209130_1000033 3300025284 Bacteria 316064
83 Ga0209676_1000230 3300025292 Bacteria 121783
84 Ga0209676_1003416 3300025292 Bacteria 9799
85 Ga0209676_1045046 3300025292 Bacteria 1204
86 Ga0209025_1000019 3300025294 Bacteria 631548
87 Ga0209025_1000032 3300025294 Bacteria 416141
88 Ga0209025_1013720 3300025294 Bacteria 5063
89 Ga0209025_1017027 3300025294 Bacteria 4232
90 Ga0209025_1024830 3300025294 Bacteria 3078
91 Ga0209025_1051015 3300025294 Bacteria 1648
92 Ga0209564_1000079 3300025295 Bacteria 266525
93 Ga0209564_1005678 3300025295 Bacteria 6997
94 Ga0209564_1025084 3300025295 Bacteria 2018
95 Ga0209758_1051282 3300025297 Bacteria 1437
96 Ga0209050_1000233 3300025298 Bacteria 121806
97 Ga0209050_1001041 3300025298 Bacteria 34372
98 Ga0209050_1003955 3300025298 Bacteria 10468
99 Ga0209050_1005159 3300025298 Bacteria 8366
100 Ga0209256_1000310 3300025299 Bacteria 85227
101 Ga0209256_1000359 3300025299 Bacteria 74498
102 Ga0209256_1001875 3300025299 Bacteria 19395
103 Ga0209256_1004572 3300025299 Bacteria 8576
104 Ga0209256_1009828 3300025299 Bacteria 4117
105 Ga0207426_1000078 3300025302 Bacteria 316064
106 Ga0207426_1003418 3300025302 Bacteria 8653
107 Ga0209051_1002200 3300025303 Bacteria 14404
108 Ga0209051_1009362 3300025303 Bacteria 5058
109 Ga0209257_1000375 3300025304 Bacteria 89617
110 Ga0209257_1002493 3300025304 Bacteria 18174
111 Ga0209257_1003734 3300025304 Bacteria 12639
112 Ga0207710_10016915 3300025900 Bacteria 3088
113 Ga0207710_10106991 3300025900 Bacteria 1325
114 Ga0207647_10035712 3300025904 Bacteria 3165
115 Ga0207695_10000220 3300025913 Bacteria 152742
116 Ga0207663_10088682 3300025916 Bacteria 2046
117 Ga0207694_10144165 3300025924 Bacteria 1916
118 Ga0207700_10221992 3300025928 Bacteria 1602
119 Ga0207664_10145496 3300025929 Bacteria 2009
120 Ga0207644_10017066 3300025931 Bacteria 4896
121 Ga0207644_10138880 3300025931 Bacteria 1869
122 Ga0207644_10342123 3300025931 Bacteria 1213
123 Ga0207665_10123938 3300025939 Bacteria 1828
124 Ga0207667_10291980 3300025949 Bacteria 1666
125 Ga0207712_10093298 3300025961 Bacteria 2221
126 Ga0207703_10112393 3300026035 Bacteria 2327
127 Ga0207708_10678678 3300026075 Bacteria 879
128 Ga0207641_10002379 3300026088 Bacteria 17350
129 Ga0207648_10001507 3300026089 Bacteria 25668
130 Ga0268266_10001748 3300028379 Bacteria 24852
131 Ga0268266_10002215 3300028379 Bacteria 21243
132 Ga0268265_10009755 3300028380 Bacteria 6482
133 Ga0268264_10000461 3300028381 Bacteria 55246
134 Ga0307515_10036205 3300028794 Bacteria 7994
135 Ga0307515_10064905 3300028794 Bacteria 5095
136 Ga0307510_10000103 3300033180 Bacteria 66493
137 Ga0307510_10061391 3300033180 Bacteria 3854
138 Ga0373931_0103911 3300035691 Bacteria 1602
139 Ga0436361_1082768 3300039447 Bacteria 4983
140 Ga0439465_0004038 3300041413 Bacteria 4786
141 Ga0451841_0124895 3300041498 Bacteria 1976
142 Ga0466972_0016692 3300044658 Bacteria 3670
143 Ga0495638_0033767 3300046460 Bacteria 3270
144 Ga0495638_0071404 3300046460 Bacteria 2123
145 Ga0495650_0019039 3300046471 Bacteria 3393
146 Ga0495650_0067779 3300046471 Bacteria 1409
147 Ga0495580_0027151 3300046472 Bacteria 4168
148 Ga0495607_0068124 3300046501 Bacteria 1997
149 Ga0495583_0000236 3300046506 Bacteria 91911
150 Ga0495606_0013797 3300046507 Bacteria 6353
151 Ga0495610_0079152 3300046512 Bacteria 1513
152 Ga0495616_0046199 3300046513 Bacteria 2199
153 Ga0495631_0031571 3300046518 Bacteria 2394
154 Ga0495632_0000178 3300046519 Bacteria 64841
155 Ga0495632_0049430 3300046519 Bacteria 2079
156 Ga0495637_0032593 3300046520 Bacteria 2294
157 Ga0495643_0136958 3300046522 Bacteria 1224
158 Ga0495609_0100279 3300046538 Bacteria 1255
159 Ga0495622_0030442 3300046557 Bacteria 2522
160 Ga0495633_0037125 3300046558 Bacteria 2332
161 Ga0495668_0000034 3300046616 Bacteria 254171
162 Ga0495668_0106300 3300046616 Bacteria 1535
163 Ga0495611_0000095 3300046648 Bacteria 61293
164 Ga0495611_0038001 3300046648 Bacteria 2140
165 Ga0495625_0028421 3300046660 Bacteria 4193
166 Ga0495625_0043533 3300046660 Bacteria 3256
167 Ga0495625_0070607 3300046660 Bacteria 2452
168 Ga0495588_0001899 3300046674 Bacteria 8920
169 Ga0495671_0000045 3300046692 Bacteria 159097
170 Ga0495671_0016676 3300046692 Bacteria 3918
171 Ga0495671_0027254 3300046692 Bacteria 2952
172 Ga0495649_0021232 3300046694 Bacteria 3639
173 Ga0495589_0187910 3300046794 Bacteria 978
174 Ga0495604_0130972 3300047317 Bacteria 1803
175 Ga0495672_0023065 3300047320 Bacteria 4035
176 Ga0495683_0007804 3300047323 Bacteria 5743
177 Ga0495673_0000063 3300047469 Bacteria 225912
178 Ga0495686_0004207 3300047472 Bacteria 11948
179 Ga0496104_0068840 3300048907 Bacteria 3363
180 Ga0496106_0495840 3300048909 Bacteria 981
181 Ga0496110_0254385 3300048913 Bacteria 1599
182 Ga0496113_0116189 3300048916 Bacteria 2087
183 Ga0496116_0022287 3300048919 Bacteria 4750
184 Ga0496116_0114351 3300048919 Bacteria 1576
185 Ga0496118_0039424 3300048921 Bacteria 3770
186 Ga0496118_0041331 3300048921 Bacteria 3651
187 Ga0496118_0167761 3300048921 Bacteria 1346
188 Ga0496120_0202105 3300048923 Bacteria 961
189 Ga0496121_0003892 3300048924 Bacteria 20737
190 Ga0496121_0191983 3300048924 Bacteria 1463
191 Ga0496122_0001548 3300048925 Bacteria 36461
192 Ga0496122_0002563 3300048925 Bacteria 25535
193 Ga0496122_0038012 3300048925 Bacteria 3864
194 Ga0496122_0120274 3300048925 Bacteria 1695
195 Ga0496123_0001274 3300048926 Bacteria 36113
196 Ga0496123_0002105 3300048926 Bacteria 25563
197 Ga0496123_0061168 3300048926 Bacteria 2422
198 Ga0496123_0172293 3300048926 Bacteria 1140
199 Ga0496124_0004255 3300048927 Bacteria 16850
200 Ga0496124_0010892 3300048927 Bacteria 9149
201 Ga0496124_0025334 3300048927 Bacteria 5374
202 Ga0496124_0031674 3300048927 Bacteria 4678
203 Ga0496124_0305649 3300048927 Bacteria 1146
204 Ga0496125_0000518 3300048928 Bacteria 67038
205 Ga0496125_0002260 3300048928 Bacteria 25563
206 Ga0496125_0006315 3300048928 Bacteria 12865
207 Ga0496125_0086801 3300048928 Bacteria 2365
208 Ga0496125_0121174 3300048928 Bacteria 1865
209 Ga0496125_0144848 3300048928 Bacteria 1644
210 Ga0496126_0002132 3300048929 Bacteria 27592
211 Ga0496126_0086761 3300048929 Bacteria 2758
212 Ga0496126_0100318 3300048929 Bacteria 2534
213 Ga0496126_0245064 3300048929 Bacteria 1495
214 Ga0501249_000189 3300049679 Bacteria 18867
215 Ga0501204_002484 3300049850 Bacteria 1876
216 nmdc:mga03683_253_c1 3300050489 Bacteria 16677
217 nmdc:mga03n38_45113_c1 3300050490 Bacteria 1940
218 nmdc:mga00v17_176857_c1 3300050491 Bacteria 1377
219 nmdc:mga00v17_21938_c1 3300050491 Bacteria 3679
220 nmdc:mga00v17_91790_c1 3300050491 Bacteria 1908
221 nmdc:mga0yw44_2358_c3 3300050492 Bacteria 6403
222 nmdc:mga0yw44_88269_c1 3300050492 Bacteria 1955
223 nmdc:mga07m45_63751_c1 3300050496 Bacteria 2090
224 nmdc:mga05p37_224276_c1 3300050507 Bacteria 2267
225 nmdc:mga0n895_275021_c1 3300050512 Bacteria 1708
226 nmdc:mga0sz30_64226_c1 3300050516 Bacteria 1572
227 nmdc:mga0sz30_816_c1 3300050516 Bacteria 11236
228 Ga0500578_0161346 3300053086 Bacteria 1391
229 Ga0500643_010928 3300053087 Bacteria 3348
230 Ga0500651_0002858 3300053093 Bacteria 9273
231 Ga0500566_0000647 3300053094 Bacteria 19487
232 Ga0500654_063436 3300053099 Bacteria 1869
233 Ga0500556_0000003 3300053104 Bacteria 679379
234 Ga0500560_000035 3300053107 Bacteria 14303
235 Ga0500569_004114 3300053109 Bacteria 3035
236 Ga0500595_003756 3300053119 Bacteria 6994
237 Ga0500607_000077 3300053121 Bacteria 71543
238 Ga0500608_001298 3300053122 Bacteria 8893
239 Ga0500614_020967 3300053123 Bacteria 1513
240 Ga0500618_000007 3300053125 Bacteria 226268
241 Ga0500618_000363 3300053125 Bacteria 31513
242 Ga0500642_0000104 3300053130 Bacteria 40747
243 Ga0500652_000968 3300053131 Bacteria 9486
244 Ga0500655_012396 3300053133 Bacteria 1550
245 Ga0500559_0000117 3300053136 Bacteria 62940
246 Ga0500559_0001580 3300053136 Bacteria 12722
247 Ga0500559_0007926 3300053136 Bacteria 4683
248 Ga0500568_0000579 3300053139 Bacteria 26786
249 Ga0500588_0036109 3300053146 Bacteria 1459
250 Ga0500603_056572 3300053150 Bacteria 1087
251 Ga0500616_0000094 3300053153 Bacteria 181038
252 Ga0500616_0000483 3300053153 Bacteria 51655
253 Ga0500616_0001603 3300053153 Bacteria 21084
254 Ga0500622_0001002 3300053156 Bacteria 23819
255 Ga0500636_0005192 3300053177 Bacteria 7408
256 Ga0500637_0005524 3300053178 Bacteria 6129
257 Ga0500645_000988 3300053730 Bacteria 16082
258 Ga0500645_004618 3300053730 Bacteria 5244
259 Ga0500596_015090 3300053735 Bacteria 1161

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025900 Ga0207710_10106991 Ga0207710_101069911 244
2 3300046648 Ga0495611_0000095 Ga0495611_0000095_51784_52599 255
3 3300053125 Ga0500618_000007 Ga0500618_000007_108450_109277 256
4 3300053150 Ga0500603_056572 Ga0500603_056572_35_823 262
5 iso_pu_bacteria 2977232053 2977234608 265
6 iso_pu_bacteria 3005452660 3005453483 266
7 3300005347 Ga0070668_100273207 Ga0070668_1002732071 268
8 3300005356 Ga0070674_100044295 Ga0070674_1000442954 268
9 3300005459 Ga0068867_100008101 Ga0068867_1000081012 268
10 3300005718 Ga0068866_10037728 Ga0068866_100377282 268
11 3300009176 Ga0105242_10040050 Ga0105242_100400502 268
12 3300013297 Ga0157378_10003470 Ga0157378_100034708 268
13 3300025298 Ga0209050_1003955 Ga0209050_10039559 268
14 3300026089 Ga0207648_10001507 Ga0207648_100015072 268
15 3300046471 Ga0495650_0019039 Ga0495650_0019039_1227_2045 268
16 3300046471 Ga0495650_0067779 Ga0495650_0067779_332_1150 268
17 3300046507 Ga0495606_0013797 Ga0495606_0013797_886_1704 268
18 3300048921 Ga0496118_0039424 Ga0496118_0039424_2530_3366 268
19 3300005459 Ga0068867_100242129 Ga0068867_1002421292 269
20 3300014325 Ga0163163_10119957 Ga0163163_101199574 269
21 3300046460 Ga0495638_0033767 Ga0495638_0033767_2127_2960 269
22 3300046472 Ga0495580_0027151 Ga0495580_0027151_2852_3718 269
23 3300005355 Ga0070671_100186771 Ga0070671_1001867712 270
24 3300025931 Ga0207644_10138880 Ga0207644_101388802 270
25 3300048925 Ga0496122_0001548 Ga0496122_0001548_7261_8094 270
26 3300048926 Ga0496123_0001274 Ga0496123_0001274_21993_22826 270
27 3300048927 Ga0496124_0031674 Ga0496124_0031674_70_903 270
28 iso_pu_bacteria 2523231067 2523470014 270
29 iso_pu_bacteria 2643221560 2643821381 270
30 3300009093 Ga0105240_10000389 Ga0105240_1000038938 271
31 3300009551 Ga0105238_10150859 Ga0105238_101508592 271
32 3300025913 Ga0207695_10000220 Ga0207695_1000022027 271
33 3300025924 Ga0207694_10144165 Ga0207694_101441652 271
34 3300044658 Ga0466972_0016692 Ga0466972_0016692_1553_2392 271
35 iso_pu_bacteria 2996887358 2996888723 271
36 iso_pu_bacteria 8005321885 8005323250 271
37 3300025294 Ga0209025_1024830 Ga0209025_10248303 272
38 iso_pu_bacteria 2534681796 2535515756 272
39 iso_pu_bacteria 2643221599 2644007963 272
40 iso_pu_bacteria 8005258706 8005259995 272
41 iso_pu_bacteria 8005542996 8005544390 272
42 iso_pu_bacteria 2582581306 2585264760 273
43 iso_pu_bacteria 2582581865 2585386171 273
44 iso_pu_bacteria 2841846520 2841851323 273
45 iso_pu_bacteria 2842124991 2842129298 273
46 iso_pu_bacteria 2909399089 2909400702 273
47 3300005347 Ga0070668_100102261 Ga0070668_1001022612 274
48 3300005841 Ga0068863_100001752 Ga0068863_1000017527 274
49 3300005843 Ga0068860_100538128 Ga0068860_1005381282 274
50 3300025304 Ga0209257_1000375 Ga0209257_100037547 274
51 3300026088 Ga0207641_10002379 Ga0207641_1000237911 274
52 3300046660 Ga0495625_0070607 Ga0495625_0070607_1418_2242 274
53 3300046692 Ga0495671_0016676 Ga0495671_0016676_1332_2156 274
54 3300047323 Ga0495683_0007804 Ga0495683_0007804_3777_4601 274
55 3300048916 Ga0496113_0116189 Ga0496113_0116189_725_1549 274
56 3300048925 Ga0496122_0002563 Ga0496122_0002563_7758_8582 274
57 3300048926 Ga0496123_0002105 Ga0496123_0002105_7786_8610 274
58 3300048928 Ga0496125_0002260 Ga0496125_0002260_16954_17778 274
59 3300048928 Ga0496125_0121174 Ga0496125_0121174_204_1028 274
60 3300048929 Ga0496126_0002132 Ga0496126_0002132_9829_10653 274
61 3300053136 Ga0500559_0007926 Ga0500559_0007926_2541_3365 274
62 iso_pu_bacteria 2509276019 2509378882 274
63 iso_pu_bacteria 2529292951 2530649602 274
64 iso_pu_bacteria 2558860100 2558860523 274
65 iso_pu_bacteria 2599185352 2600192638 274
66 iso_pu_bacteria 2643221557 2643809452 274
67 iso_pu_bacteria 2643221610 2644066849 274
68 iso_pu_bacteria 2643221668 2644375794 274
69 iso_pu_bacteria 2643221675 2644418052 274
70 iso_pu_bacteria 2643221680 2644451307 274
71 iso_pu_bacteria 2643221723 2644677493 274
72 iso_pu_bacteria 2643221726 2644691652 274
73 iso_pu_bacteria 2850079185 2850082420 274
74 iso_pu_bacteria 2855730933 2855733152 274
75 iso_pu_bacteria 2855767633 2855771904 274
76 iso_pu_bacteria 2920822456 2920827020 274
77 iso_pu_bacteria 3003930520 3003934254 274
78 3300047472 Ga0495686_0004207 Ga0495686_0004207_1559_2386 275
79 iso_pu_bacteria 2602042107 2603860405 275
80 iso_pu_bacteria 2857524615 2857525352 275
81 iso_pu_bacteria 2889033259 2889036324 275
82 iso_pu_bacteria 2893066018 2893066299 275
83 3300002773 JGI25152J39213_1010644 JGI25152J39213_10106442 276
84 3300003790 Ga0055528_1008779 Ga0055528_10087792 276
85 3300003792 Ga0055540_1028314 Ga0055540_10283142 276
86 3300005355 Ga0070671_100019419 Ga0070671_1000194194 276
87 3300005455 Ga0070663_100009601 Ga0070663_1000096014 276
88 3300005548 Ga0070665_100002842 Ga0070665_1000028428 276
89 3300005563 Ga0068855_100310430 Ga0068855_1003104302 276
90 3300005844 Ga0068862_100078849 Ga0068862_1000788491 276
91 3300006178 Ga0075367_10017410 Ga0075367_100174105 276
92 3300006846 Ga0075430_100477150 Ga0075430_1004771501 276
93 3300006847 Ga0075431_100526839 Ga0075431_1005268391 276
94 3300006880 Ga0075429_100408898 Ga0075429_1004088981 276
95 3300009093 Ga0105240_10022001 Ga0105240_100220017 276
96 3300009101 Ga0105247_10028003 Ga0105247_100280032 276
97 3300009147 Ga0114129_10185067 Ga0114129_101850672 276
98 3300009553 Ga0105249_10038243 Ga0105249_100382432 276
99 3300010375 Ga0105239_10412062 Ga0105239_104120622 276
100 3300011119 Ga0105246_10123509 Ga0105246_101235092 276
101 3300017792 Ga0163161_10012566 Ga0163161_100125665 276
102 3300025258 Ga0209129_1002209 Ga0209129_100220911 276
103 3300025273 Ga0209673_1010001 Ga0209673_10100011 276
104 3300025294 Ga0209025_1013720 Ga0209025_10137205 276
105 3300025294 Ga0209025_1017027 Ga0209025_10170275 276
106 3300025295 Ga0209564_1005678 Ga0209564_10056782 276
107 3300025297 Ga0209758_1051282 Ga0209758_10512822 276
108 3300025299 Ga0209256_1004572 Ga0209256_10045723 276
109 3300025299 Ga0209256_1009828 Ga0209256_10098282 276
110 3300025302 Ga0207426_1003418 Ga0207426_10034187 276
111 3300025303 Ga0209051_1002200 Ga0209051_100220012 276
112 3300025931 Ga0207644_10017066 Ga0207644_100170663 276
113 3300025949 Ga0207667_10291980 Ga0207667_102919801 276
114 3300025961 Ga0207712_10093298 Ga0207712_100932982 276
115 3300028379 Ga0268266_10001748 Ga0268266_100017487 276
116 3300028379 Ga0268266_10002215 Ga0268266_1000221513 276
117 3300028380 Ga0268265_10009755 Ga0268265_100097556 276
118 3300033180 Ga0307510_10000103 Ga0307510_1000010342 276
119 3300046538 Ga0495609_0100279 Ga0495609_0100279_65_895 276
120 3300048907 Ga0496104_0068840 Ga0496104_0068840_1583_2416 276
121 3300048919 Ga0496116_0114351 Ga0496116_0114351_706_1539 276
122 3300048923 Ga0496120_0202105 Ga0496120_0202105_89_919 276
123 3300048925 Ga0496122_0038012 Ga0496122_0038012_2325_3158 276
124 3300048926 Ga0496123_0172293 Ga0496123_0172293_204_1037 276
125 3300048927 Ga0496124_0004255 Ga0496124_0004255_14519_15349 276
126 3300048927 Ga0496124_0010892 Ga0496124_0010892_102_932 276
127 3300048928 Ga0496125_0000518 Ga0496125_0000518_32304_33134 276
128 3300048928 Ga0496125_0086801 Ga0496125_0086801_129_959 276
129 3300048929 Ga0496126_0245064 Ga0496126_0245064_524_1357 276
130 3300050507 nmdc:mga05p37_224276_c1 nmdc:mga05p37_224276_c1_471_1352 276
131 3300053730 Ga0500645_000988 Ga0500645_000988_2912_3745 276
132 3300053735 Ga0500596_015090 Ga0500596_015090_28_858 276
133 iso_pu_bacteria 2513237082 2513555242 276
134 iso_pu_bacteria 2513237083 2513562225 276
135 iso_pu_bacteria 8003955200 8003959075 276
136 iso_pu_bacteria 8054302542 8054306633 276
137 3300001989 JGI24739J22299_10000502 JGI24739J22299_1000050212 277
138 3300002067 JGI24735J21928_10006091 JGI24735J21928_100060914 277
139 3300003187 JGI25151J46595_10000317 JGI25151J46595_100003179 277
140 3300003187 JGI25151J46595_10000466 JGI25151J46595_1000046619 277
141 3300006871 Ga0075434_100119441 Ga0075434_1001194412 277
142 3300009101 Ga0105247_10035822 Ga0105247_100358224 277
143 3300013102 Ga0157371_10006165 Ga0157371_100061657 277
144 3300025294 Ga0209025_1000019 Ga0209025_1000019444 277
145 3300025303 Ga0209051_1009362 Ga0209051_10093624 277
146 3300025900 Ga0207710_10016915 Ga0207710_100169152 277
147 3300025904 Ga0207647_10035712 Ga0207647_100357123 277
148 3300025931 Ga0207644_10342123 Ga0207644_103421232 277
149 3300028794 Ga0307515_10036205 Ga0307515_100362053 277
150 3300028794 Ga0307515_10064905 Ga0307515_100649057 277
151 3300033180 Ga0307510_10061391 Ga0307510_100613914 277
152 3300039447 Ga0436361_1082768 Ga0436361_1082768_3973_4806 277
153 3300041498 Ga0451841_0124895 Ga0451841_0124895_14_943 277
154 3300046660 Ga0495625_0043533 Ga0495625_0043533_78_914 277
155 3300046692 Ga0495671_0027254 Ga0495671_0027254_1042_1875 277
156 3300046694 Ga0495649_0021232 Ga0495649_0021232_2175_3008 277
157 3300047320 Ga0495672_0023065 Ga0495672_0023065_1648_2493 277
158 3300048909 Ga0496106_0495840 Ga0496106_0495840_60_893 277
159 3300048913 Ga0496110_0254385 Ga0496110_0254385_263_1096 277
160 3300050512 nmdc:mga0n895_275021_c1 nmdc:mga0n895_275021_c1_317_1150 277
161 3300053099 Ga0500654_063436 Ga0500654_063436_190_1107 277
162 3300053121 Ga0500607_000077 Ga0500607_000077_52073_52906 277
163 3300053153 Ga0500616_0001603 Ga0500616_0001603_6177_7010 277
164 3300053730 Ga0500645_004618 Ga0500645_004618_524_1360 277
165 iso_pu_bacteria 2643221733 2644731074 277
166 iso_pu_bacteria 2917699015 2917702826 277
167 3300002987 JGI25159J45721_1000011 JGI25159J45721_1000011100 278
168 3300003187 JGI25151J46595_10011838 JGI25151J46595_100118384 278
169 3300003354 JGI25160J50197_1000007 JGI25160J50197_1000007186 278
170 3300003374 JGI25161J50226_1000308 JGI25161J50226_100030815 278
171 3300003771 Ga0055526_1001144 Ga0055526_100114410 278
172 3300003775 Ga0055524_1000633 Ga0055524_100063316 278
173 3300003775 Ga0055524_1029990 Ga0055524_10299902 278
174 3300003781 Ga0055536_1004070 Ga0055536_10040703 278
175 3300003791 Ga0055530_10014065 Ga0055530_100140652 278
176 3300003794 Ga0055531_10008276 Ga0055531_100082762 278
177 3300004625 Ga0055543_1000070 Ga0055543_100007051 278
178 3300005262 Ga0065165_1000011 Ga0065165_1000011108 278
179 3300005434 Ga0070709_10029868 Ga0070709_100298681 278
180 3300005435 Ga0070714_100113037 Ga0070714_1001130372 278
181 3300005436 Ga0070713_100012297 Ga0070713_1000122972 278
182 3300005439 Ga0070711_100053070 Ga0070711_1000530702 278
183 3300006173 Ga0070716_100045945 Ga0070716_1000459452 278
184 3300006175 Ga0070712_100306200 Ga0070712_1003062001 278
185 3300013105 Ga0157369_10600798 Ga0157369_106007981 278
186 3300013249 Ga0171463_1002 Ga0171463_1002258 278
187 3300015690 Ga0183363_1014 Ga0183363_101452 278
188 3300021321 Ga0214542_1018663 Ga0214542_10186634 278
189 3300021327 Ga0214543_1000008 Ga0214543_1000008332 278
190 3300025208 Ga0209436_100316 Ga0209436_1003163 278
191 3300025245 Ga0207425_1031246 Ga0207425_10312461 278
192 3300025284 Ga0209130_1000033 Ga0209130_1000033108 278
193 3300025292 Ga0209676_1003416 Ga0209676_10034162 278
194 3300025294 Ga0209025_1000032 Ga0209025_1000032180 278
195 3300025294 Ga0209025_1051015 Ga0209025_10510152 278
196 3300025295 Ga0209564_1000079 Ga0209564_1000079142 278
197 3300025298 Ga0209050_1005159 Ga0209050_10051592 278
198 3300025299 Ga0209256_1000310 Ga0209256_100031067 278
199 3300025299 Ga0209256_1001875 Ga0209256_100187512 278
200 3300025302 Ga0207426_1000078 Ga0207426_1000078108 278
201 3300025304 Ga0209257_1003734 Ga0209257_10037349 278
202 3300025916 Ga0207663_10088682 Ga0207663_100886822 278
203 3300025928 Ga0207700_10221992 Ga0207700_102219922 278
204 3300025929 Ga0207664_10145496 Ga0207664_101454962 278
205 3300025939 Ga0207665_10123938 Ga0207665_101239382 278
206 3300041413 Ga0439465_0004038 Ga0439465_0004038_2719_3555 278
207 3300046674 Ga0495588_0001899 Ga0495588_0001899_7465_8301 278
208 3300048929 Ga0496126_0100318 Ga0496126_0100318_673_1509 278
209 3300050489 nmdc:mga03683_253_c1 nmdc:mga03683_253_c1_310_1146 278
210 3300053107 Ga0500560_000035 Ga0500560_000035_9861_10697 278
211 3300053139 Ga0500568_0000579 Ga0500568_0000579_10857_11693 278
212 3300053153 Ga0500616_0000094 Ga0500616_0000094_155738_156574 278
213 3300053153 Ga0500616_0000483 Ga0500616_0000483_35404_36240 278
214 iso_pu_bacteria 2513237351 2514589531 278
215 iso_pu_bacteria 2840764183 2840769727 278
216 3300005618 Ga0068864_100150285 Ga0068864_1001502851 279
217 3300006038 Ga0075365_10125941 Ga0075365_101259412 279
218 3300006051 Ga0075364_10139965 Ga0075364_101399652 279
219 3300006186 Ga0075369_10033052 Ga0075369_100330522 279
220 3300025295 Ga0209564_1025084 Ga0209564_10250841 279
221 3300026035 Ga0207703_10112393 Ga0207703_101123932 279
222 3300035691 Ga0373931_0103911 Ga0373931_0103911_236_1075 279
223 3300046460 Ga0495638_0071404 Ga0495638_0071404_840_1679 279
224 3300046501 Ga0495607_0068124 Ga0495607_0068124_235_1074 279
225 3300046512 Ga0495610_0079152 Ga0495610_0079152_51_890 279
226 3300046513 Ga0495616_0046199 Ga0495616_0046199_370_1209 279
227 3300046518 Ga0495631_0031571 Ga0495631_0031571_1093_1932 279
228 3300046519 Ga0495632_0049430 Ga0495632_0049430_301_1140 279
229 3300046520 Ga0495637_0032593 Ga0495637_0032593_930_1769 279
230 3300046522 Ga0495643_0136958 Ga0495643_0136958_244_1083 279
231 3300046557 Ga0495622_0030442 Ga0495622_0030442_863_1702 279
232 3300046616 Ga0495668_0106300 Ga0495668_0106300_368_1207 279
233 3300046648 Ga0495611_0038001 Ga0495611_0038001_313_1152 279
234 3300046660 Ga0495625_0028421 Ga0495625_0028421_718_1557 279
235 3300046794 Ga0495589_0187910 Ga0495589_0187910_121_960 279
236 3300047317 Ga0495604_0130972 Ga0495604_0130972_822_1661 279
237 3300048919 Ga0496116_0022287 Ga0496116_0022287_1614_2453 279
238 3300048921 Ga0496118_0041331 Ga0496118_0041331_1906_2745 279
239 3300048921 Ga0496118_0167761 Ga0496118_0167761_111_950 279
240 3300048924 Ga0496121_0003892 Ga0496121_0003892_15208_16047 279
241 3300048924 Ga0496121_0191983 Ga0496121_0191983_20_859 279
242 3300048925 Ga0496122_0120274 Ga0496122_0120274_57_896 279
243 3300048926 Ga0496123_0061168 Ga0496123_0061168_119_958 279
244 3300048927 Ga0496124_0305649 Ga0496124_0305649_275_1114 279
245 3300048928 Ga0496125_0006315 Ga0496125_0006315_1609_2448 279
246 3300048928 Ga0496125_0144848 Ga0496125_0144848_774_1613 279
247 3300048929 Ga0496126_0086761 Ga0496126_0086761_1182_2021 279
248 3300050491 nmdc:mga00v17_176857_c1 nmdc:mga00v17_176857_c1_346_1185 279
249 3300050491 nmdc:mga00v17_21938_c1 nmdc:mga00v17_21938_c1_276_1115 279
250 3300050491 nmdc:mga00v17_91790_c1 nmdc:mga00v17_91790_c1_946_1785 279
251 3300050492 nmdc:mga0yw44_88269_c1 nmdc:mga0yw44_88269_c1_925_1764 279
252 3300050516 nmdc:mga0sz30_64226_c1 nmdc:mga0sz30_64226_c1_97_936 279
253 3300053087 Ga0500643_010928 Ga0500643_010928_2317_3156 279
254 3300053093 Ga0500651_0002858 Ga0500651_0002858_7785_8624 279
255 3300053094 Ga0500566_0000647 Ga0500566_0000647_13453_14292 279
256 3300053104 Ga0500556_0000003 Ga0500556_0000003_38017_38856 279
257 3300053109 Ga0500569_004114 Ga0500569_004114_1976_2815 279
258 3300053122 Ga0500608_001298 Ga0500608_001298_849_1688 279
259 3300053130 Ga0500642_0000104 Ga0500642_0000104_16013_16852 279
260 3300053131 Ga0500652_000968 Ga0500652_000968_6973_7812 279
261 3300053136 Ga0500559_0000117 Ga0500559_0000117_17144_17983 279
262 3300053146 Ga0500588_0036109 Ga0500588_0036109_183_1022 279
263 3300053156 Ga0500622_0001002 Ga0500622_0001002_11998_12837 279
264 3300053177 Ga0500636_0005192 Ga0500636_0005192_2960_3799 279
265 3300006048 Ga0075363_100061608 Ga0075363_1000616082 280
266 3300006178 Ga0075367_10005711 Ga0075367_100057115 280
267 3300006353 Ga0075370_10064551 Ga0075370_100645512 280
268 3300025292 Ga0209676_1045046 Ga0209676_10450461 280
269 3300025299 Ga0209256_1000359 Ga0209256_100035971 280
270 3300026075 Ga0207708_10678678 Ga0207708_106786781 280
271 3300048927 Ga0496124_0025334 Ga0496124_0025334_806_1648 280
272 3300049679 Ga0501249_000189 Ga0501249_000189_16110_16952 280
273 3300049850 Ga0501204_002484 Ga0501204_002484_902_1744 280
274 3300050490 nmdc:mga03n38_45113_c1 nmdc:mga03n38_45113_c1_744_1586 280
275 3300050496 nmdc:mga07m45_63751_c1 nmdc:mga07m45_63751_c1_277_1119 280
276 3300050516 nmdc:mga0sz30_816_c1 nmdc:mga0sz30_816_c1_96_938 280
277 3300053086 Ga0500578_0161346 Ga0500578_0161346_291_1133 280
278 3300053119 Ga0500595_003756 Ga0500595_003756_5953_6795 280
279 3300053123 Ga0500614_020967 Ga0500614_020967_326_1168 280
280 3300003781 Ga0055536_1000235 Ga0055536_100023521 281
281 3300003791 Ga0055530_10000528 Ga0055530_1000052821 281
282 3300025292 Ga0209676_1000230 Ga0209676_100023084 281
283 3300025298 Ga0209050_1000233 Ga0209050_100023384 281
284 3300025304 Ga0209257_1002493 Ga0209257_10024937 281
285 3300046616 Ga0495668_0000034 Ga0495668_0000034_231581_232426 281
286 3300053136 Ga0500559_0001580 Ga0500559_0001580_10118_10963 281
287 3300005578 Ga0068854_100015866 Ga0068854_1000158663 282
288 3300053125 Ga0500618_000363 Ga0500618_000363_26824_27675 282
289 3300053133 Ga0500655_012396 Ga0500655_012396_443_1294 282
290 2162886007 SwRhRL2b_contig_1843357 SwRhRL2b_0521.00005810 283
291 3300005289 Ga0065704_10070144 Ga0065704_100701445 283
292 3300005843 Ga0068860_100000821 Ga0068860_1000008217 283
293 3300005843 Ga0068860_100039765 Ga0068860_1000397653 283
294 3300025298 Ga0209050_1001041 Ga0209050_100104125 283
295 3300028381 Ga0268264_10000461 Ga0268264_1000046143 283
296 3300046506 Ga0495583_0000236 Ga0495583_0000236_51578_52429 283
297 3300046519 Ga0495632_0000178 Ga0495632_0000178_32227_33078 283
298 3300046558 Ga0495633_0037125 Ga0495633_0037125_1039_1890 283
299 3300046692 Ga0495671_0000045 Ga0495671_0000045_158079_158930 283
300 3300047469 Ga0495673_0000063 Ga0495673_0000063_164598_165449 283
301 3300050492 nmdc:mga0yw44_2358_c3 nmdc:mga0yw44_2358_c3_449_1300 283
302 3300053178 Ga0500637_0005524 Ga0500637_0005524_4218_5072 283

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

32

221

0.95

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

38

268

0.9

PF08659

KR

KR domain

33

211

0.83

PF13460

NAD_binding_10

NAD(P)H-binding

38

219

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hsd-assembly1.cif.gz_A the refined three-dimensional structure of 3alpha,20beta-hydroxysteroid dehydrogenase and possible roles of the residues conserved in short-chain dehydrogenases 0.9477 2 179
3m1a-assembly6.cif.gz_J the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9416 1 273
3m1a-assembly4.cif.gz_E the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.94 2 274
3m1a-assembly6.cif.gz_J the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9382 1 273
8u9a-assembly1.cif.gz_B crystal structure of 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase from klebsiella aerogenes (dbh bound) 0.9356 2 177
ID Description Score Start End Superfamily
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9575 82 177 3.40.50.720
af_Q54WM6_4_292_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9516 2 276 3.40.50.720
2hsdA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9477 2 179 3.40.50.720
af_C7FZY1_11_303_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9473 2 274 3.40.50.720
af_O74628_6_277_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9465 2 274 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7W8X8Q4-F1-model_v4 NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 0.9923 1 170 GO:0016491
AF-A2WIF3-F1-model_v4 deleted 0.9885 2 276
AF-A0A1I0XTZ1-F1-model_v4 Short-chain dehydrogenase 0.9884 1 205 GO:0016491
AF-A0A519EJG1-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.988 15 276 GO:0016491
AF-A0A7W8X8Q4-F1-model_v4 NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 0.9865 1 170 GO:0016491

Feature Viewer

pLDDT pTM Quality
92.97 0.91 High
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Predicted Structure (AlphaFold2)

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