F396425

General Info

Members Datasets Scaffolds Average Seq Length
302 165 603 334

Family's Representative Sequence

Representative Sequence 3300006237|Ga0097621_100248535|Ga0097621_1002485352
Length 359
Sequence MNSSRKKISIRDIAAELNLSITTVSFVINGKSKQKGISVATTKKVNELIKKRGFYPNLAARMLRTGKSKTIGLIVEDISNNFFGRIAKTIETEAHKSGYNVFFSSTENEDTMAIELINKMKNSSVDGYIITATTGLKNELEKLKKEHIPFVLLDRMIPGIEANYIILDNYQGGYDLTKHLLCNGYSKIGFVTIVDGMSQMFDREKGFKDAMADAKITVTEEKILKVPFKETDENNIGIIRNYLAKNPDLDALFFATNYLGVLGIEALQQANVSIPSDIAIVSFDDNDLFRVFTPSVTVASQPIKEIATRAIGLLIKMINKGQKPNKVIGEIIKPVIIKRDSSPKKISKLMRPVKVLSKQ

Samples

Sample ID Description Type Environment
1 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
28 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
29 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
30 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
48 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
49 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
50 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
51 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
52 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
53 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
69 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
70 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
84 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
85 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
86 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
93 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
94 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
95 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
96 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
97 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
98 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
99 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
100 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
101 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
102 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
103 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
107 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
108 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
109 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
110 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
115 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
116 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
117 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
121 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
122 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
123 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
124 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
125 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
126 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
127 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
128 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
129 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
130 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
131 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
132 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
133 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
134 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
135 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
136 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
137 2738541302 Pedobacter sp. CF074 Isolate Unclassified
138 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
139 2739367651 Pedobacter sp. OK291 Isolate Unclassified
140 2739367656 Pedobacter sp. CF523 Isolate Unclassified
141 2739367663 Pedobacter sp. YR510 Isolate Unclassified
142 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
143 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
144 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
145 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
146 2818991437 Pedobacter terrae 518 Isolate Unclassified
147 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
148 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
149 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
150 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
151 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
152 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
153 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
154 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
155 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
156 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
157 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
158 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
159 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
160 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
161 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
162 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
163 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
164 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
165 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.11
Metatranscriptomes 0.33
Isolates 16.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.91
Nodule 1.99
Rhizoplane 0.33
Rhizosphere 67.22
Stem 0
Stem Tuber 0
Unclassified 4.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0097621_100248535 3300006237 Bacteria 1557
2 JGI25152J39213_1000191 3300002773 Bacteria 41162
3 JGI25152J39213_1000203 3300002773 Bacteria 39884
4 JGI25150J39212_1000011 3300002774 Bacteria 195312
5 JGI25150J39212_1000025 3300002774 Bacteria 123597
6 JGI25151J46595_10000033 3300003187 Bacteria 195312
7 JGI25151J46595_10000089 3300003187 Bacteria 123597
8 JGI25153J46596_10000079 3300003215 Bacteria 113263
9 JGI25153J46596_10000199 3300003215 Bacteria 56085
10 rootH1_10018083 3300003316 Bacteria 2184
11 rootH1_10018083 3300003323 Bacteria 11281
12 rootH2_10001572 3300003320 Bacteria 12671
13 rootH2_10027848 3300003320 Unclassified 2900
14 rootH2_10129128 3300003320 Bacteria 3744
15 rootH1_10113762 3300003323 Bacteria 6974
16 rootH1_10337605 3300003323 Unclassified 1568
17 JGI25160J50197_1003466 3300003354 Bacteria 7058
18 Ga0006562J51391_1037375 3300003578 Bacteria 1815
19 Ga0055536_1000004 3300003781 Bacteria 411108
20 Ga0055536_1000010 3300003781 Bacteria 304614
21 Ga0055536_1000038 3300003781 Bacteria 133102
22 Ga0055530_10002626 3300003791 Bacteria 11280
23 Ga0055530_10003948 3300003791 Bacteria 8025
24 Ga0055530_10006900 3300003791 Bacteria 4919
25 Ga0065714_10008489 3300005288 Bacteria 6911
26 Ga0065714_10064660 3300005288 Bacteria 25193
27 Ga0065714_10065514 3300005288 Bacteria 9660
28 Ga0065714_10065590 3300005288 Bacteria 9274
29 Ga0065714_10070064 3300005288 Bacteria 3982
30 Ga0065714_10070339 3300005288 Bacteria 3895
31 Ga0065704_10073864 3300005289 Bacteria 6723
32 Ga0065715_10095317 3300005293 Bacteria 4112
33 Ga0070683_100001758 3300005329 Bacteria 16869
34 Ga0070666_10028294 3300005335 Unclassified 3677
35 Ga0070684_100018209 3300005535 Bacteria 5782
36 Ga0068853_100000381 3300005539 Bacteria 30507
37 Ga0070665_100000041 3300005548 Bacteria 297849
38 Ga0068855_100003373 3300005563 Bacteria 19563
39 Ga0068855_100271043 3300005563 Bacteria 1887
40 Ga0068857_100006166 3300005577 Bacteria 10249
41 Ga0068854_100064605 3300005578 Bacteria 2659
42 Ga0068852_100011820 3300005616 Bacteria 6596
43 Ga0068852_100083841 3300005616 Bacteria 2835
44 Ga0068852_100142541 3300005616 Bacteria 2219
45 Ga0068860_100000383 3300005843 Bacteria 57999
46 Ga0068860_100055937 3300005843 Bacteria 3751
47 Ga0081540_1013099 3300005983 Bacteria 5415
48 Ga0099824_1026891 3300006942 Bacteria 2876
49 Ga0079104_1001123 3300006946 Bacteria 19636
50 Ga0099826_10000243 3300006948 Bacteria 23880
51 Ga0105244_10000088 3300009036 Bacteria 100959
52 Ga0105244_10074942 3300009036 Bacteria 1682
53 Ga0105240_10000224 3300009093 Bacteria 113175
54 Ga0105240_10003321 3300009093 Bacteria 25128
55 Ga0105240_10005749 3300009093 Bacteria 18399
56 Ga0105240_10016944 3300009093 Bacteria 9847
57 Ga0105240_10043603 3300009093 Bacteria 5706
58 Ga0105240_10111699 3300009093 Unclassified 3305
59 Ga0105240_10166312 3300009093 Bacteria 2616
60 Ga0105241_10000493 3300009174 Bacteria 29814
61 Ga0105237_10000719 3300009545 Bacteria 45812
62 Ga0105237_10003180 3300009545 Bacteria 19703
63 Ga0105237_10003801 3300009545 Bacteria 17746
64 Ga0105237_10007464 3300009545 Bacteria 11961
65 Ga0105237_10039649 3300009545 Bacteria 4754
66 Ga0105237_10061190 3300009545 Bacteria 3765
67 Ga0105237_10104923 3300009545 Unclassified 2818
68 Ga0105238_10000247 3300009551 Bacteria 60300
69 Ga0105238_10040865 3300009551 Bacteria 4698
70 Ga0105238_10288095 3300009551 Unclassified 1624
71 Ga0105238_10324387 3300009551 Bacteria 1526
72 Ga0105239_10000685 3300010375 Bacteria 48269
73 Ga0105239_10003640 3300010375 Bacteria 18838
74 Ga0105239_10012015 3300010375 Bacteria 9656
75 Ga0105239_10024490 3300010375 Bacteria 6650
76 Ga0105239_10083743 3300010375 Bacteria 3513
77 Ga0157373_10000011 3300013100 Bacteria 195785
78 Ga0157373_10008153 3300013100 Bacteria 7788
79 Ga0157373_10164930 3300013100 Bacteria 1559
80 Ga0157371_10000041 3300013102 Bacteria 203957
81 Ga0157371_10000046 3300013102 Bacteria 187304
82 Ga0157371_10012199 3300013102 Bacteria 6579
83 Ga0157371_10034987 3300013102 Bacteria 3601
84 Ga0157370_10001311 3300013104 Bacteria 31027
85 Ga0157370_10001638 3300013104 Bacteria 27629
86 Ga0157370_10003414 3300013104 Bacteria 18656
87 Ga0157370_10004945 3300013104 Bacteria 15086
88 Ga0157370_10008208 3300013104 Bacteria 11283
89 Ga0157370_10010910 3300013104 Bacteria 9541
90 Ga0157370_10023119 3300013104 Bacteria 6179
91 Ga0157370_10033609 3300013104 Bacteria 5000
92 Ga0157370_10040980 3300013104 Bacteria 4470
93 Ga0157370_10053076 3300013104 Bacteria 3867
94 Ga0157370_10058598 3300013104 Bacteria 3660
95 Ga0157370_10161951 3300013104 Bacteria 2081
96 Ga0157369_10000016 3300013105 Bacteria 257827
97 Ga0157369_10000414 3300013105 Bacteria 56570
98 Ga0157369_10028701 3300013105 Bacteria 6154
99 Ga0157369_10037262 3300013105 Bacteria 5324
100 Ga0157369_10155439 3300013105 Bacteria 2416
101 Ga0157374_10000001 3300013296 Bacteria 1077351
102 Ga0157378_10382294 3300013297 Unclassified 1383
103 Ga0163162_10000150 3300013306 Bacteria 64459
104 Ga0163162_10002474 3300013306 Bacteria 17453
105 Ga0163162_10006399 3300013306 Bacteria 11402
106 Ga0157372_10002046 3300013307 Bacteria 21946
107 Ga0157372_10009568 3300013307 Bacteria 10302
108 Ga0157372_10072843 3300013307 Bacteria 3871
109 Ga0157375_10206129 3300013308 Bacteria 2122
110 Ga0157375_10279605 3300013308 Bacteria 1832
111 Ga0182008_10000595 3300014497 Bacteria 26622
112 Ga0182008_10002100 3300014497 Bacteria 12715
113 Ga0182008_10020498 3300014497 Bacteria 3403
114 Ga0157376_10003052 3300014969 Bacteria 11469
115 Ga0182006_1000094 3300015261 Bacteria 106056
116 Ga0182006_1000628 3300015261 Bacteria 25215
117 Ga0182006_1001387 3300015261 Bacteria 14728
118 Ga0182006_1006286 3300015261 Bacteria 5535
119 Ga0182006_1007234 3300015261 Bacteria 5098
120 Ga0182006_1022679 3300015261 Bacteria 2607
121 Ga0182006_1071382 3300015261 Bacteria 1287
122 Ga0182007_10000002 3300015262 Bacteria 564661
123 Ga0182007_10000009 3300015262 Bacteria 316298
124 Ga0182007_10002610 3300015262 Bacteria 8874
125 Ga0183373_1004 3300015682 Bacteria 537398
126 Ga0183373_1013 3300015682 Bacteria 112340
127 Ga0163161_10000009 3300017792 Bacteria 287918
128 Ga0163161_10000212 3300017792 Bacteria 52935
129 Ga0163161_10000403 3300017792 Bacteria 36170
130 Ga0163161_10003385 3300017792 Bacteria 11194
131 Ga0163161_10003857 3300017792 Bacteria 10513
132 Ga0163161_10178810 3300017792 Bacteria 1626
133 Ga0207425_1000003 3300025245 Bacteria 1145342
134 Ga0207425_1000008 3300025245 Bacteria 618024
135 Ga0209129_1000042 3300025258 Bacteria 305537
136 Ga0209129_1000076 3300025258 Bacteria 195353
137 Ga0209676_1000009 3300025292 Bacteria 981719
138 Ga0209676_1000201 3300025292 Bacteria 133195
139 Ga0209025_1000007 3300025294 Bacteria 1145109
140 Ga0209025_1000020 3300025294 Bacteria 618024
141 Ga0209758_1000022 3300025297 Bacteria 618024
142 Ga0209758_1000114 3300025297 Bacteria 199324
143 Ga0209050_1000048 3300025298 Bacteria 371553
144 Ga0209050_1000103 3300025298 Bacteria 229225
145 Ga0209050_1000203 3300025298 Bacteria 133156
146 Ga0207426_1000002 3300025302 Bacteria 1249660
147 Ga0207655_1000045 3300025728 Bacteria 315397
148 Ga0207655_1050569 3300025728 Bacteria 1688
149 Ga0207647_10118055 3300025904 Unclassified 1565
150 Ga0207654_10000775 3300025911 Bacteria 17563
151 Ga0207695_10000023 3300025913 Bacteria 657903
152 Ga0207695_10000031 3300025913 Bacteria 526801
153 Ga0207695_10000110 3300025913 Bacteria 250079
154 Ga0207695_10009152 3300025913 Bacteria 12291
155 Ga0207695_10013562 3300025913 Bacteria 9710
156 Ga0207695_10018132 3300025913 Bacteria 8147
157 Ga0207671_10002088 3300025914 Bacteria 21861
158 Ga0207671_10019574 3300025914 Bacteria 5174
159 Ga0207671_10051285 3300025914 Unclassified 3057
160 Ga0207671_10083983 3300025914 Bacteria 2391
161 Ga0207671_10319393 3300025914 Bacteria 1229
162 Ga0207694_10003736 3300025924 Bacteria 12063
163 Ga0207694_10092459 3300025924 Unclassified 2388
164 Ga0207667_10000144 3300025949 Bacteria 108295
165 Ga0207667_10004138 3300025949 Bacteria 17827
166 Ga0207667_10251725 3300025949 Bacteria 1807
167 Ga0207639_10063586 3300026041 Bacteria 2858
168 Ga0207639_10111864 3300026041 Unclassified 2227
169 Ga0207674_10005115 3300026116 Bacteria 15654
170 Ga0207698_10031503 3300026142 Bacteria 3828
171 Ga0209281_1000037 3300027111 Bacteria 368555
172 Ga0209489_120598 3300027361 Bacteria 1848
173 Ga0209282_1000574 3300027666 Bacteria 17947
174 Ga0268266_10000049 3300028379 Bacteria 307763
175 Ga0268264_10000041 3300028381 Bacteria 372501
176 Ga0307517_10002168 3300028786 Bacteria 31819
177 Ga0307517_10196069 3300028786 Bacteria 1272
178 Ga0307515_10006132 3300028794 Bacteria 24179
179 Ga0307511_10000139 3300030521 Bacteria 67385
180 Ga0307516_10001339 3300031730 Bacteria 34211
181 Ga0307405_10000006 3300031731 Bacteria 361477
182 Ga0307405_10000036 3300031731 Bacteria 91687
183 Ga0307413_10060793 3300031824 Bacteria 2327
184 Ga0307407_10000003 3300031903 Bacteria 271723
185 Ga0307407_10000006 3300031903 Bacteria 218714
186 Ga0307409_100038050 3300031995 Bacteria 3554
187 Ga0307409_100350772 3300031995 Bacteria 1392
188 Ga0307416_100000002 3300032002 Bacteria 509907
189 Ga0307416_100000058 3300032002 Bacteria 103674
190 Ga0307416_100007140 3300032002 Bacteria 7064
191 Ga0307414_10038070 3300032004 Bacteria 3226
192 Ga0307414_10068210 3300032004 Bacteria 2551
193 Ga0307411_10000008 3300032005 Bacteria 321575
194 Ga0307510_10005783 3300033180 Bacteria 14743
195 Ga0373935_0121443 3300035692 Bacteria 1746
196 Ga0439447_004692 3300041407 Bacteria 4659
197 Ga0466961_0043563 3300044693 Unclassified 2874
198 Ga0466964_0203967 3300044706 Bacteria 951
199 Ga0466959_0003582 3300045049 Bacteria 10228
200 Ga0466958_0052606 3300045836 Unclassified 2469
201 Ga0495638_0110101 3300046460 Bacteria 1637
202 Ga0495650_0000023 3300046471 Bacteria 527763
203 Ga0495606_0000012 3300046507 Bacteria 294304
204 Ga0495606_0002871 3300046507 Bacteria 19056
205 Ga0495610_0000570 3300046512 Bacteria 36722
206 Ga0495610_0000579 3300046512 Bacteria 36396
207 Ga0495610_0000680 3300046512 Bacteria 32861
208 Ga0495610_0001371 3300046512 Bacteria 21651
209 Ga0495610_0003899 3300046512 Bacteria 11324
210 Ga0495610_0127822 3300046512 Bacteria 1107
211 Ga0495616_0001594 3300046513 Bacteria 15541
212 Ga0495648_0001158 3300046524 Bacteria 26658
213 Ga0495609_0006573 3300046538 Bacteria 5921
214 Ga0495633_0030991 3300046558 Bacteria 2596
215 Ga0495633_0068949 3300046558 Bacteria 1651
216 Ga0495611_0000342 3300046648 Bacteria 30350
217 Ga0495625_0000018 3300046660 Bacteria 299567
218 Ga0495625_0045968 3300046660 Bacteria 3153
219 Ga0495661_0030406 3300046665 Bacteria 3439
220 Ga0495649_0000015 3300046694 Bacteria 246431
221 Ga0495687_000001 3300047443 Bacteria 1215582
222 Ga0495686_0000004 3300047472 Bacteria 869019
223 Ga0496115_0100012 3300048918 Bacteria 2377
224 Ga0496116_0000179 3300048919 Bacteria 126710
225 Ga0496117_0085721 3300048920 Bacteria 2049
226 Ga0496118_0019691 3300048921 Bacteria 6021
227 Ga0496121_0006820 3300048924 Bacteria 13982
228 Ga0496125_0000490 3300048928 Bacteria 69282
229 Ga0496126_0003214 3300048929 Bacteria 20937
230 Ga0501033_0109341 3300049570 Bacteria 2013
231 Ga0501034_0037422 3300049571 Unclassified 4913
232 Ga0501034_0040453 3300049571 Bacteria 4719
233 Ga0501249_000708 3300049679 Bacteria 7543
234 Ga0501249_031535 3300049679 Bacteria 1183
235 Ga0501241_019333 3300049758 Bacteria 1250
236 Ga0501266_000004 3300049763 Bacteria 356286
237 Ga0501280_004980 3300049776 Bacteria 1919
238 Ga0501035_0271014 3300049822 Bacteria 1437
239 Ga0501044_0014030 3300049823 Bacteria 8651
240 Ga0500646_0002475 3300053090 Bacteria 4798
241 Ga0500646_0003288 3300053090 Bacteria 4152
242 Ga0500583_0033709 3300053092 Bacteria 2269
243 Ga0500583_0048812 3300053092 Bacteria 1956
244 Ga0500641_0000040 3300053096 Bacteria 68174
245 Ga0500641_0000127 3300053096 Bacteria 28582
246 Ga0500594_0028444 3300053118 Bacteria 1455
247 Ga0500658_0000060 3300053134 Bacteria 54045
248 Ga0500658_0035891 3300053134 Bacteria 1965
249 Ga0500559_0016222 3300053136 Bacteria 3146
250 Ga0500588_0018535 3300053146 Bacteria 1836
251 Ga0500622_0005660 3300053156 Bacteria 7437
252 Ga0466962_0160261 3300061719 Bacteria 1093
253 2520878107 2519899754 Bacteria 5336938
254 2586208471 2585427687 Bacteria 5544917
255 2586210307 2585427687 Bacteria 5544917
256 2644009014 2643221600 Bacteria 5530138
257 2644373250 2643221667 Bacteria 5627472
258 2644373788 2643221667 Bacteria 5627472
259 2644642810 2643221716 Bacteria 4986332
260 2644686058 2643221725 Bacteria 5087956
261 2738736326 2738541279 Bacteria 6149495
262 2738768769 2738541285 Bacteria 6150075
263 2738854064 2738541302 Bacteria 5944758
264 2738854493 2738541302 Bacteria 5944758
265 2739217908 2738543007 Bacteria 6149845
266 2739587537 2739367651 Bacteria 6359826
267 2739588057 2739367651 Bacteria 6359826
268 2739614301 2739367656 Bacteria 5152243
269 2739646208 2739367663 Bacteria 5040914
270 2739646966 2739367663 Bacteria 5040914
271 2740002350 2739367857 Bacteria 5433684
272 2740007166 2739367858 Bacteria 5432813
273 2802653014 2802428842 Bacteria 4926114
274 2817415142 2816332280 Bacteria 5109718
275 2819545449 2818991437 Bacteria 5805520
276 2819545945 2818991437 Bacteria 5805520
277 2842724154 2842722452 Bacteria 6263924
278 2842724672 2842722452 Bacteria 6263924
279 2842911833 2842909656 Bacteria 6185908
280 2842913707 2842909656 Bacteria 6185908
281 2849282471 2849281842 Bacteria 6065644
282 2849285684 2849281842 Bacteria 6065644
283 2857620302 2857618242 Bacteria 5635925
284 2857631412 2857627736 Bacteria 5625397
285 2857631550 2857627736 Bacteria 5625397
286 2881363687 2881359912 Bacteria 4935907
287 2883072651 2883068021 Bacteria 6192739
288 2896087816 2896085136 Bacteria 6129793
289 2896112458 2896109856 Bacteria 7140722
290 2903896361 2903895155 Bacteria 5258610
291 2904446199 2904445276 Bacteria 5310396
292 2904447943 2904445276 Bacteria 5310396
293 2919196540 2919191525 Bacteria 5765973
294 2929152114 2929150217 Bacteria 5462483
295 2945998467 2945997725 Bacteria 6404843
296 2945999023 2945997725 Bacteria 6404843
297 2954020937 2954016120 Bacteria 6446024
298 2954021471 2954016120 Bacteria 6446024
299 2958463087 2958458903 Bacteria 5301041
300 2977269009 2977268062 Bacteria 5243061
301 8054308037 8054307821 Bacteria 5212224
302 8055420758 8055419101 Bacteria 5289643
303 Ga0097621_100248535
304 JGI25152J39213_1000191
305 JGI25152J39213_1000203
306 JGI25150J39212_1000011
307 JGI25150J39212_1000025
308 JGI25151J46595_10000033
309 JGI25151J46595_10000089
310 JGI25153J46596_10000079
311 JGI25153J46596_10000199
312 rootH1_10018083
313 rootH2_10001572
314 rootH2_10027848
315 rootH2_10129128
316 rootH1_10113762
317 rootH1_10337605
318 JGI25160J50197_1003466
319 Ga0006562J51391_1037375
320 Ga0055536_1000004
321 Ga0055536_1000010
322 Ga0055536_1000038
323 Ga0055530_10002626
324 Ga0055530_10003948
325 Ga0055530_10006900
326 Ga0065714_10008489
327 Ga0065714_10064660
328 Ga0065714_10065514
329 Ga0065714_10065590
330 Ga0065714_10070064
331 Ga0065714_10070339
332 Ga0065704_10073864
333 Ga0065715_10095317
334 Ga0070683_100001758
335 Ga0070666_10028294
336 Ga0070684_100018209
337 Ga0068853_100000381
338 Ga0070665_100000041
339 Ga0068855_100003373
340 Ga0068855_100271043
341 Ga0068857_100006166
342 Ga0068854_100064605
343 Ga0068852_100011820
344 Ga0068852_100083841
345 Ga0068852_100142541
346 Ga0068860_100000383
347 Ga0068860_100055937
348 Ga0081540_1013099
349 Ga0099824_1026891
350 Ga0079104_1001123
351 Ga0099826_10000243
352 Ga0105244_10000088
353 Ga0105244_10074942
354 Ga0105240_10000224
355 Ga0105240_10003321
356 Ga0105240_10005749
357 Ga0105240_10016944
358 Ga0105240_10043603
359 Ga0105240_10111699
360 Ga0105240_10166312
361 Ga0105241_10000493
362 Ga0105237_10000719
363 Ga0105237_10003180
364 Ga0105237_10003801
365 Ga0105237_10007464
366 Ga0105237_10039649
367 Ga0105237_10061190
368 Ga0105237_10104923
369 Ga0105238_10000247
370 Ga0105238_10040865
371 Ga0105238_10288095
372 Ga0105238_10324387
373 Ga0105239_10000685
374 Ga0105239_10003640
375 Ga0105239_10012015
376 Ga0105239_10024490
377 Ga0105239_10083743
378 Ga0157373_10000011
379 Ga0157373_10008153
380 Ga0157373_10164930
381 Ga0157371_10000041
382 Ga0157371_10000046
383 Ga0157371_10012199
384 Ga0157371_10034987
385 Ga0157370_10001311
386 Ga0157370_10001638
387 Ga0157370_10003414
388 Ga0157370_10004945
389 Ga0157370_10008208
390 Ga0157370_10010910
391 Ga0157370_10023119
392 Ga0157370_10033609
393 Ga0157370_10040980
394 Ga0157370_10053076
395 Ga0157370_10058598
396 Ga0157370_10161951
397 Ga0157369_10000016
398 Ga0157369_10000414
399 Ga0157369_10028701
400 Ga0157369_10037262
401 Ga0157369_10155439
402 Ga0157374_10000001
403 Ga0157378_10382294
404 Ga0163162_10000150
405 Ga0163162_10002474
406 Ga0163162_10006399
407 Ga0157372_10002046
408 Ga0157372_10009568
409 Ga0157372_10072843
410 Ga0157375_10206129
411 Ga0157375_10279605
412 Ga0182008_10000595
413 Ga0182008_10002100
414 Ga0182008_10020498
415 Ga0157376_10003052
416 Ga0182006_1000094
417 Ga0182006_1000628
418 Ga0182006_1001387
419 Ga0182006_1006286
420 Ga0182006_1007234
421 Ga0182006_1022679
422 Ga0182006_1071382
423 Ga0182007_10000002
424 Ga0182007_10000009
425 Ga0182007_10002610
426 Ga0183373_1004
427 Ga0183373_1013
428 Ga0163161_10000009
429 Ga0163161_10000212
430 Ga0163161_10000403
431 Ga0163161_10003385
432 Ga0163161_10003857
433 Ga0163161_10178810
434 Ga0207425_1000003
435 Ga0207425_1000008
436 Ga0209129_1000042
437 Ga0209129_1000076
438 Ga0209676_1000009
439 Ga0209676_1000201
440 Ga0209025_1000007
441 Ga0209025_1000020
442 Ga0209758_1000022
443 Ga0209758_1000114
444 Ga0209050_1000048
445 Ga0209050_1000103
446 Ga0209050_1000203
447 Ga0207426_1000002
448 Ga0207655_1000045
449 Ga0207655_1050569
450 Ga0207647_10118055
451 Ga0207654_10000775
452 Ga0207695_10000023
453 Ga0207695_10000031
454 Ga0207695_10000110
455 Ga0207695_10009152
456 Ga0207695_10013562
457 Ga0207695_10018132
458 Ga0207671_10002088
459 Ga0207671_10019574
460 Ga0207671_10051285
461 Ga0207671_10083983
462 Ga0207671_10319393
463 Ga0207694_10003736
464 Ga0207694_10092459
465 Ga0207667_10000144
466 Ga0207667_10004138
467 Ga0207667_10251725
468 Ga0207639_10063586
469 Ga0207639_10111864
470 Ga0207674_10005115
471 Ga0207698_10031503
472 Ga0209281_1000037
473 Ga0209489_120598
474 Ga0209282_1000574
475 Ga0268266_10000049
476 Ga0268264_10000041
477 Ga0307517_10002168
478 Ga0307517_10196069
479 Ga0307515_10006132
480 Ga0307511_10000139
481 Ga0307516_10001339
482 Ga0307405_10000006
483 Ga0307405_10000036
484 Ga0307413_10060793
485 Ga0307407_10000003
486 Ga0307407_10000006
487 Ga0307409_100038050
488 Ga0307409_100350772
489 Ga0307416_100000002
490 Ga0307416_100000058
491 Ga0307416_100007140
492 Ga0307414_10038070
493 Ga0307414_10068210
494 Ga0307411_10000008
495 Ga0307510_10005783
496 Ga0373935_0121443
497 Ga0439447_004692
498 Ga0466961_0043563
499 Ga0466964_0203967
500 Ga0466959_0003582
501 Ga0466958_0052606
502 Ga0495638_0110101
503 Ga0495650_0000023
504 Ga0495606_0000012
505 Ga0495606_0002871
506 Ga0495610_0000570
507 Ga0495610_0000579
508 Ga0495610_0000680
509 Ga0495610_0001371
510 Ga0495610_0003899
511 Ga0495610_0127822
512 Ga0495616_0001594
513 Ga0495648_0001158
514 Ga0495609_0006573
515 Ga0495633_0030991
516 Ga0495633_0068949
517 Ga0495611_0000342
518 Ga0495625_0000018
519 Ga0495625_0045968
520 Ga0495661_0030406
521 Ga0495649_0000015
522 Ga0495687_000001
523 Ga0495686_0000004
524 Ga0496115_0100012
525 Ga0496116_0000179
526 Ga0496117_0085721
527 Ga0496118_0019691
528 Ga0496121_0006820
529 Ga0496125_0000490
530 Ga0496126_0003214
531 Ga0501033_0109341
532 Ga0501034_0037422
533 Ga0501034_0040453
534 Ga0501249_000708
535 Ga0501249_031535
536 Ga0501241_019333
537 Ga0501266_000004
538 Ga0501280_004980
539 Ga0501035_0271014
540 Ga0501044_0014030
541 Ga0500646_0002475
542 Ga0500646_0003288
543 Ga0500583_0033709
544 Ga0500583_0048812
545 Ga0500641_0000040
546 Ga0500641_0000127
547 Ga0500594_0028444
548 Ga0500658_0000060
549 Ga0500658_0035891
550 Ga0500559_0016222
551 Ga0500588_0018535
552 Ga0500622_0005660
553 Ga0466962_0160261
554 2520878107
555 2586208471
556 2586210307
557 2644009014
558 2644373250
559 2644373788
560 2644642810
561 2644686058
562 2738736326
563 2738768769
564 2738854064
565 2738854493
566 2739217908
567 2739587537
568 2739588057
569 2739614301
570 2739646208
571 2739646966
572 2740002350
573 2740007166
574 2802653014
575 2817415142
576 2819545449
577 2819545945
578 2842724154
579 2842724672
580 2842911833
581 2842913707
582 2849282471
583 2849285684
584 2857620302
585 2857631412
586 2857631550
587 2881363687
588 2883072651
589 2896087816
590 2896112458
591 2903896361
592 2904446199
593 2904447943
594 2919196540
595 2929152114
596 2945998467
597 2945999023
598 2954020937
599 2954021471
600 2958463087
601 2977269009
602 8054308037
603 8055420758

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13377

Peripla_BP_3

Periplasmic binding protein-like domain

177

342

0.88

PF00532

Peripla_BP_1

Periplasmic binding proteins and sugar binding domain of LacI family

68

335

0.87

PF13407

Peripla_BP_4

Periplasmic binding protein domain

71

323

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3clk-assembly1.cif.gz_B crystal structure of a transcription regulator from lactobacillus plantarum 0.9032 67 334
3bil-assembly1.cif.gz_B crystal structure of a probable laci family transcriptional regulator from corynebacterium glutamicum 0.901 67 333
7pu4-assembly2.cif.gz_C crystal structure of the dimer rbp-n and rbp-trunc from thermotoga maritima ribose binding protein 0.9002 65 181
3egc-assembly3.cif.gz_E crystal structure of a putative ribose operon repressor from burkholderia thailandensis 0.9001 63 331
7x7h-assembly1.cif.gz_C crystal structure of fructose regulator/histidine phosphocarrier protein complex from vibrio cholerae 0.8978 63 334
ID Description Score Start End Superfamily
3e61A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9289 67 148 3.40.50.2300
af_P02925_28_128_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9124 67 163 3.40.50.2300
af_P76142_29_128_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9103 67 160 3.40.50.2300
3egcB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9083 166 293 3.40.50.2300
3bilB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9004 167 293 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A7V5LKJ1-F1-model_v4 LacI family transcriptional regulator 0.9161 113 333 GO:0000976
GO:0003700
AF-A0A831TZM3-F1-model_v4 LacI family transcriptional regulator 0.9069 145 333 GO:0000976
GO:0003700
AF-A0A5H2X892-F1-model_v4 deleted 0.9049 147 333
AF-A0A101I7W8-F1-model_v4 Transcriptional regulator 0.903 85 333 GO:0000976
GO:0003700
AF-A0A4R7L8X0-F1-model_v4 deleted 0.902 61 333

Map